Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr17

Orthogroup ID

OG0009881

Physical Location & Seq

Genomic Coordinates Reverse (-)

3980422 .. 3984105

Gene Structure 3684 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom17g05590.7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2448 bp

ATGTTGGGACGTGATTTGGAAGCCTTGATTCAGCGAGCCAGGGATTACAAGAAAGAGTATGGGGACTCATTTGTGTCTGTCGAGCATTTGATACTTGGTTTTTCTCAAGATCAACGGTTTGGGAAGCAATTACTTCGGGATTTTCAAATATCCAAGGAAACTTTGAAATCAGCTATAGAATCCGTAAGGGGGCGCCAATCAGTTATTGACCAAGATCCTGAAGGGAAATATGAAGCACTTGAAAAGTACGGAAAAGATTTAACAGCTATGGCAAAAGTAGGAAAGCTTGACCCAGTAATAGGAAGAGATGATGAAATTCGCAGGTGCATCCAGATTCTCTCCAGAAGAACAAAGAACAACCCGGTGCTGATTGGTGAACCAGGTGTCGGAAAAACTGCAATTTCTGAAGGGCTTGCTCAAAGAATCGTGCAAGGGGATGTCCCACAAGCTCTGATGAATCGTAAGTTAATATCCCTTGACATGGGCGCACTAATTGCTGGGGCAAAGTATCGGGGAGAATTTGAGGACAGGCTGAAGGCAGTACTCAGGGAAGTAACAGAATCAGAGGGCCAGATAATCCTTTTTATCGATGAGATCCACACAGTTGTTGGAGCAGGTGCTACAAACGGTGCAATGGATGCTGGTAATCTCTTAAAACCCATGCTTGGTCGAGGAGAGTTGCGGTGTATAGGTGCAACAACACTGGATGAGTATCGTAAATATATTGAGAAAGATCCGGCATTGGAGCGTCGGTTCCAGCAAGTTTATGTTGATCAACCTACAGTGGAAGATACCATTTCAATACTCCGAGGACTGCGTGAGAGATATGAGTTGCATCATGGAGTCCGCATTTCTGATGGTGCACTGGTGGAAGCTGCAATTCTTTCAGACCGTTACATCAGTGGGCGATTTTTACCTGACAAAGCTATTGACTTAGTTGATGAAGCTGCTGCTAAATTGAAAATGGAGATTACATCAAAGCCCACAGCCCTTGATGAGATCAATCGTTCGGTGTTGAAACTTGAAATGGAGAGGTTATCTCTTACAAATGATACAGACAAAGCTTCAAAAGAGAGATTGAACCGCCTTGAAGCTGAGTTAGCTCTCTTAAAAGAAAAACAATCCGAGTTGACTGAGCAGTGGGAGCATGAAAAATCTGTCATGACTCGCATTCAGTCAATCAAGGAAGAGATTGACAGACTAAATCTTGAGATCCACCAAGCCGAACGAGAGTATGATCTCAACCGTGCAGCTGAGTTGAAGTACGGGAGTCTGAATTCTTTGCAGCGCGAACTCGTTGATGCAGAAAAAGAGCTCGATGAGTATATGAGGTCTGGGAAGTCCATGCTGAGAGAGGAAGTTAATGGAAGTGATATTGCTGAAATAGTAAGTAAGTGGACTGGTATTCCTGTTTCCAAGCTTCAACAATCGGAGAGGGAGAAGCTCTTACATTTGGAGGATGAGCTGCATAAACGTGTTGTAGGTCAGGAGCCTGCAGTGAGATCAGTGGCTGAAGCTATTCAGCGGTCTCGGGCAGGTCTCTCAGATCCTCATCGCCCCATTGCTAGTTTCATGTTTATGGGTCCCACTGGTGTTGGGAAGACAGAACTAGCTAAGGCCCTCGCCTCCTACTTGTTCAACACGGAAGAAACACTTGTAAGAATCGATATGAGTGAGTACATGGAAAAGCATGCTGTTTCAAGATTGATAGGAGCTCCACCTGGTTATGTGGGGTATGAGGAGGGAGGACAGCTGACAGAGGTGGTTCGCCGGAGACCATATTCAGTTATTTTGTTCGACGAGATAGAGAAGGCACATTCTGATGTGTTCAATGTGTTCCTTCAAATTTTAGACGATGGGAGAATAACTGACTCGCAGGGTCGTACTGTGAGCTTCACCAACACTGTCATCATTATGACCTCAAATGTGGGTTCACAGTACATACTAAATGCTGACGATGACGACACTCCTAAAGAGTTGGCTTACGACACTATAAAGCACCGGGTACTGGAGGCTGCAAGATCAATATTTCGCCCCGAGTTCATGAACCGTGTTGATGAGTACATAGTTTTCCAGCCCCTGGACCGTGATCAGATAAGCCGTATTGTCAAGCTACAGTTGGACCGAGTGCAAAAGAGAATTGCAGACCGCAAGATGAAGATCAAGGTGAGCGATGCAGCTATCGAGCTTCTCGGAAGTCTTGGGTATGATCCAAACTACGGCGCCAGGCCAGTGAAGCGGGTGATACAGCAGTATATCGAAAACGAGCTTGCCAAGGGCATACTGAGAGGAGAGTTTAGGGAAGAAGACACAGTGGCCATAGACACAGAGGTGACGACATTTTCCAGTGGCCAGCTCCCCCAGCAAAAGCTAGTGTTCAGGAGGTTGAAAACTGACTCAGAATCTCCGGCTACACAGAACCAAGAGGCTTTCTCGGAGGCTCGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006950 GO:0006996 GO:0008150 GO:0009266 GO:0009408 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0009657 GO:0009658 GO:0009987 GO:0016043 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0071840

KEGG Pathways

Metabolic & Signaling

ko04213 map04213

Pfam Domains

Protein Families

AAA AAA_2 ClpB_D2-small Clp_N

Protein Analysis

816

Amino Acids

92.29

Weight (kDa)

5.48

Isoelectric Point (pI)

38.75

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009881)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G15450
fragaria_vesca	FvH4_6g47410 FvH4_6g47410 FvH4_6g47410
malus_domestica	MD00G1172100.v1.1 MD09G1061700.v1.1
prunus_persica	Prupe.3G258500_v2.0.a1 Prupe.3G258500_v2.0.a1 Prupe.3G258500_v2.0.a1
pyrus_communis	pycom111g05200 pycom17g05590
rosa_chinensis	RchiOBHm_Chr2g0166481
rosa_laevigata	RLG00000021622
rosa_multiflora	Rmu_ssc0000296.1_g000002
rosa_roxburghii	Rroxscaffold_2G00084860
rosa_rugosa	Rorug02G0523200
rosa_samantha	Rh2AG589400 Rh2BG601600 Rh2CG572200 Rh2DG612100
rosa_wichuraiana	Rw2G049120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	312, 605
Acc36I	ACCTGC	3 cut(s)	312, 605, 1526
AccB1I	GGYRCC	2 cut(s)	192, 2222
AccB7I	CCANNNNNTGG	1 cut(s)	2080
AccII	CGCG	1 cut(s)	1290
AciI	CCGC	6 cut(s)	682, 847, 1084, 1525, 2149, 2239
AclWI	GGATC	6 cut(s)	209, 589, 728, 1207, 1541, 2204
AcoI	YGGCCR	2 cut(s)	2316, 2350
AcsI	RAATTY	4 cut(s)	315, 518, 1276, 1845
AcuI	CTGAAG	4 cut(s)	240, 426, 554, 1533
AcyI	GRCGYC	2 cut(s)	193, 2223
AfaI	GTAC	8 cut(s)	248, 543, 1265, 1679, 1885, 1940, 2007, 2063
AfiI	CCNNNNNNNGG	8 cut(s)	189, 299, 386, 481, 665, 2008, 2080, 2219
AflIII	ACRYGT	1 cut(s)	1474
AjiI	CACGTC	1 cut(s)	11
AjnI	CCWGG	5 cut(s)	38, 379, 1720, 2079, 2225
AleI	CACNNNNGTG	1 cut(s)	2330
AloI	GAACNNNNNNTCC	2 cut(s)	737, 769
Alw21I	GWGCWC	3 cut(s)	865, 1317, 1717
Alw26I	GTCTC	3 cut(s)	1533, 1544, 1768
Alw44I	GTGCAC	1 cut(s)	861
AlwI	GGATC	6 cut(s)	209, 589, 728, 1207, 1541, 2204
AlwNI	CAGNNNCTG	2 cut(s)	1511, 2080
Ama87I	CYCGRG	2 cut(s)	1530, 2036
AoxI	GGCC	5 cut(s)	568, 1617, 2228, 2316, 2350
ApaLI	GTGCAC	1 cut(s)	861
ApeKI	GCWGC	8 cut(s)	875, 947, 950, 1250, 1285, 1465, 2015, 2177
ApoI	RAATTY	4 cut(s)	315, 518, 1276, 1845
Asp700I	GAANNNNTTC	1 cut(s)	1518
AspLEI	GCGC	4 cut(s)	195, 488, 1290, 2225
AspS9I	GGNCC	5 cut(s)	568, 1583, 1618, 2083, 2122
AsuC2I	CCSGG	2 cut(s)	362, 2003
AsuHPI	GGTGA	5 cut(s)	386, 1888, 2179, 2254, 2344
AvaI	CYCGRG	2 cut(s)	1530, 2036
AvaII	GGWCC	3 cut(s)	1583, 2083, 2122
BaeGI	GKGCMC	1 cut(s)	865
BaeI	ACNNNNGTAYC	2 cut(s)	2237, 2270
BalI	TGGCCA	2 cut(s)	2318, 2352
BanI	GGYRCC	2 cut(s)	192, 2222
BanII	GRGCYC	2 cut(s)	1317, 1717
BbsI	GAAGAC	2 cut(s)	1607, 2313
Bbv12I	GWGCWC	3 cut(s)	865, 1317, 1717
BbvI	GCAGC	8 cut(s)	862, 934, 937, 1262, 1297, 1452, 2002, 2189
BccI	CCATC	2 cut(s)	851, 1850
BceAI	ACGGC	2 cut(s)	2085, 2236
BcgI	CGANNNNNNTGC	2 cut(s)	116, 150
BciT130I	CCWGG	5 cut(s)	40, 381, 1722, 2081, 2227
BclI	TGATCA	2 cut(s)	772, 2089
BcnI	CCSGG	2 cut(s)	362, 2003
BcoDI	GTCTC	3 cut(s)	1533, 1544, 1768
BfaI	CTAG	3 cut(s)	1566, 1610, 2372
BfmI	CTRYAG	4 cut(s)	174, 780, 1494, 2114
BfoI	RGCGCY	2 cut(s)	196, 2226
BfuAI	ACCTGC	3 cut(s)	312, 605, 1526
BisI	GCNGC	8 cut(s)	876, 948, 951, 1251, 1286, 1466, 2016, 2178
BlsI	GCNGC	8 cut(s)	877, 949, 952, 1252, 1287, 1467, 2017, 2179
BmcAI	AGTACT	1 cut(s)	543
Bme1390I	CCNGG	7 cut(s)	40, 362, 381, 1722, 2003, 2081, 2227
Bme18I	GGWCC	3 cut(s)	1583, 2083, 2122
BmeT110I	CYCGRG	2 cut(s)	1530, 2036
BmgBI	CACGTC	1 cut(s)	11
BmgT120I	GGNCC	5 cut(s)	568, 1583, 1618, 2083, 2122
BmiI	GGNNCC	6 cut(s)	194, 755, 1491, 1584, 1585, 2224
BmrFI	CCNGG	7 cut(s)	40, 362, 381, 1722, 2003, 2081, 2227
BmrI	ACTGGG	1 cut(s)	287
BmsI	GCATC	5 cut(s)	336, 628, 844, 1291, 2164
BmuI	ACTGGG	1 cut(s)	287
BpiI	GAAGAC	2 cut(s)	1607, 2313
BplI	GAGNNNNNCTC	3 cut(s)	1024, 1056, 2417
BpmI	CTGGAG	2 cut(s)	325, 2030
Bpu10I	CCTNAGC	1 cut(s)	1614
BpuEI	CTTGAG	2 cut(s)	90, 1229
BpuMI	CCSGG	2 cut(s)	362, 2003
Bsa29I	ATCGAT	2 cut(s)	588, 1665
BsaBI	GATNNNNATC	3 cut(s)	711, 1551, 2159
BsaHI	GRCGYC	2 cut(s)	193, 2223
BsaI	GGTCTC	3 cut(s)	1533, 1544, 1768
BsaJI	CCNNGG	5 cut(s)	39, 153, 808, 2079, 2274
BsaXI	ACNNNNNCTCC	3 cut(s)	737, 767, 2429
Bsc4I	CCNNNNNNNGG	8 cut(s)	189, 299, 386, 481, 665, 2008, 2080, 2219
Bse1I	ACTGG	8 cut(s)	293, 708, 870, 1405, 1594, 2013, 2231, 2346
Bse3DI	GCAATG	2 cut(s)	639, 1560
Bse8I	GATNNNNATC	3 cut(s)	711, 1551, 2159
BseBI	CCWGG	5 cut(s)	40, 381, 1722, 2081, 2227
BseCI	ATCGAT	2 cut(s)	588, 1665
BseDI	CCNNGG	5 cut(s)	39, 153, 808, 2079, 2274
BseGI	GGATG	5 cut(s)	327, 442, 643, 712, 1465
BseJI	GATNNNNATC	3 cut(s)	711, 1551, 2159
BseLI	CCNNNNNNNGG	8 cut(s)	189, 299, 386, 481, 665, 2008, 2080, 2219
BseMI	GCAATG	2 cut(s)	639, 1560
BseMII	CTCAG	8 cut(s)	559, 1086, 1125, 1245, 1340, 1557, 2276, 2412
BseNI	ACTGG	8 cut(s)	293, 708, 870, 1405, 1594, 2013, 2231, 2346
BseRI	GAGGAG	3 cut(s)	687, 1754, 2304
BseSI	GKGCMC	1 cut(s)	865
BseXI	GCAGC	8 cut(s)	862, 934, 937, 1262, 1297, 1452, 2002, 2189
BseYI	CCCAGC	2 cut(s)	497, 2361
BsgI	GTGCAG	1 cut(s)	1269
Bsh1236I	CGCG	1 cut(s)	1290
BshFI	GGCC	5 cut(s)	570, 1619, 2230, 2318, 2352
BshNI	GGYRCC	2 cut(s)	192, 2222
BshVI	ATCGAT	2 cut(s)	588, 1665
BsiHKAI	GWGCWC	3 cut(s)	865, 1317, 1717
BsiHKCI	CYCGRG	2 cut(s)	1530, 2036
BsiSI	CCGG	5 cut(s)	362, 737, 1771, 2002, 2408
BslFI	GGGAC	4 cut(s)	21, 77, 425, 1569
BslI	CCNNNNNNNGG	8 cut(s)	189, 299, 386, 481, 665, 2008, 2080, 2219
BsmAI	GTCTC	3 cut(s)	1533, 1544, 1768
BsmFI	GGGAC	4 cut(s)	21, 77, 425, 1569
BsmI	GAATGC	1 cut(s)	1170
BsnI	GGCC	5 cut(s)	570, 1619, 2230, 2318, 2352
Bso31I	GGTCTC	3 cut(s)	1533, 1544, 1768
BsoBI	CYCGRG	2 cut(s)	1530, 2036
Bsp1286I	GDGCHC	3 cut(s)	865, 1317, 1717
BspACI	CCGC	6 cut(s)	682, 847, 1084, 1525, 2149, 2239
BspANI	GGCC	5 cut(s)	570, 1619, 2230, 2318, 2352
BspCNI	CTCAG	8 cut(s)	558, 1087, 1126, 1246, 1341, 1556, 2277, 2411
BspDI	ATCGAT	2 cut(s)	588, 1665
BspFNI	CGCG	1 cut(s)	1290
BspHI	TCATGA	2 cut(s)	1161, 2043
BspLI	GGNNCC	6 cut(s)	194, 755, 1491, 1584, 1585, 2224
BspMAI	CTGCAG	1 cut(s)	1498
BspMI	ACCTGC	3 cut(s)	312, 605, 1526
BspPI	GGATC	6 cut(s)	209, 589, 728, 1207, 1541, 2204
BspT107I	GGYRCC	2 cut(s)	192, 2222
BspTNI	GGTCTC	3 cut(s)	1533, 1544, 1768
BsrDI	GCAATG	2 cut(s)	639, 1560
BsrI	ACTGG	8 cut(s)	293, 708, 870, 1405, 1594, 2013, 2231, 2346
BssECI	CCNNGG	5 cut(s)	39, 153, 808, 2079, 2274
BssNI	GRCGYC	2 cut(s)	193, 2223
BssT1I	CCWWGG	2 cut(s)	153, 2274
Bst2UI	CCWGG	5 cut(s)	40, 381, 1722, 2081, 2227
Bst6I	CTCTTC	2 cut(s)	298, 1182
BstACI	GRCGYC	2 cut(s)	193, 2223
BstAPI	GCANNNNNTGC	2 cut(s)	494, 638
BstC8I	GCNNGC	6 cut(s)	36, 414, 1494, 1692, 2271, 2354
BstF5I	GGATG	5 cut(s)	327, 442, 643, 712, 1465
BstFNI	CGCG	1 cut(s)	1290
BstH2I	RGCGCY	2 cut(s)	196, 2226
BstHHI	GCGC	4 cut(s)	195, 488, 1290, 2225
BstMAI	GTCTC	3 cut(s)	1533, 1544, 1768
BstMWI	GCNNNNNNNGC	6 cut(s)	494, 638, 1100, 1144, 2236, 2362
BstNI	CCWGG	5 cut(s)	40, 381, 1722, 2081, 2227
BstNSI	RCATGY	1 cut(s)	1694
BstSCI	CCNGG	7 cut(s)	38, 360, 379, 1720, 2001, 2079, 2225
BstSFI	CTRYAG	4 cut(s)	174, 780, 1494, 2114
BstSLI	GKGCMC	1 cut(s)	865
BstUI	CGCG	1 cut(s)	1290
BstV1I	GCAGC	8 cut(s)	862, 934, 937, 1262, 1297, 1452, 2002, 2189
BstV2I	GAAGAC	2 cut(s)	1607, 2313
BstX2I	RGATCY	5 cut(s)	214, 594, 733, 1212, 1546
BstYI	RGATCY	5 cut(s)	214, 594, 733, 1212, 1546
Bsu15I	ATCGAT	2 cut(s)	588, 1665
BsuRI	GGCC	5 cut(s)	570, 1619, 2230, 2318, 2352
BsuTUI	ATCGAT	2 cut(s)	588, 1665
BtgZI	GCGATG	2 cut(s)	1538, 2187
BtrI	CACGTC	1 cut(s)	11
BtsCI	GGATG	5 cut(s)	327, 442, 643, 712, 1465
BtsI	GCAGTG	2 cut(s)	1145, 1503
BveI	ACCTGC	3 cut(s)	312, 605, 1526
Cac8I	GCNNGC	6 cut(s)	36, 414, 1494, 1692, 2271, 2354
CaiI	CAGNNNCTG	2 cut(s)	1511, 2080
CciI	TCATGA	2 cut(s)	1161, 2043
CfoI	GCGC	4 cut(s)	195, 488, 1290, 2225
Cfr13I	GGNCC	5 cut(s)	568, 1583, 1618, 2083, 2122
ClaI	ATCGAT	2 cut(s)	588, 1665
CseI	GACGC	1 cut(s)	737
CsiI	ACCWGGT	2 cut(s)	379, 1720
Csp6I	GTAC	8 cut(s)	247, 542, 1264, 1678, 1884, 1939, 2006, 2062
CspCI	CAANNNNNGTGG	4 cut(s)	973, 1008, 1576, 1611
CviQI	GTAC	8 cut(s)	247, 542, 1264, 1678, 1884, 1939, 2006, 2062
DinI	GGCGCC	2 cut(s)	194, 2224
EaeI	YGGCCR	2 cut(s)	2316, 2350
Eam1104I	CTCTTC	2 cut(s)	298, 1182
EarI	CTCTTC	2 cut(s)	298, 1182
Ecl136II	GAGCTC	2 cut(s)	1315, 1715
Eco130I	CCWWGG	2 cut(s)	153, 2274
Eco24I	GRGCYC	2 cut(s)	1317, 1717
Eco31I	GGTCTC	3 cut(s)	1533, 1544, 1768
Eco47I	GGWCC	3 cut(s)	1583, 2083, 2122
Eco53kI	GAGCTC	2 cut(s)	1315, 1715
Eco57I	CTGAAG	4 cut(s)	240, 426, 554, 1533
Eco88I	CYCGRG	2 cut(s)	1530, 2036
EcoICRI	GAGCTC	2 cut(s)	1315, 1715
EcoO109I	RGGNCCY	2 cut(s)	1583, 1618
EcoRI	GAATTC	1 cut(s)	1276
EcoRII	CCWGG	5 cut(s)	38, 379, 1720, 2079, 2225
EcoT14I	CCWWGG	2 cut(s)	153, 2274
EcoT38I	GRGCYC	2 cut(s)	1317, 1717
EgeI	GGCGCC	2 cut(s)	194, 2224
EheI	GGCGCC	2 cut(s)	194, 2224
ErhI	CCWWGG	2 cut(s)	153, 2274
FalI	AAGNNNNNCTT	2 cut(s)	1638, 1670
FaqI	GGGAC	4 cut(s)	21, 77, 425, 1569
FauI	CCCGC	1 cut(s)	2232
FbaI	TGATCA	2 cut(s)	772, 2089
Fnu4HI	GCNGC	8 cut(s)	876, 948, 951, 1251, 1286, 1466, 2016, 2178
FokI	GGATG	5 cut(s)	314, 449, 650, 719, 1472
FriOI	GRGCYC	2 cut(s)	1317, 1717
Fsp4HI	GCNGC	8 cut(s)	876, 948, 951, 1251, 1286, 1466, 2016, 2178
FspBI	CTAG	3 cut(s)	1566, 1610, 2372
GlaI	GCGC	4 cut(s)	194, 487, 1289, 2224
GluI	GCNGC	8 cut(s)	876, 948, 951, 1251, 1286, 1466, 2016, 2178
GsaI	CCCAGC	2 cut(s)	501, 2365
GsuI	CTGGAG	2 cut(s)	325, 2030
HaeII	RGCGCY	2 cut(s)	196, 2226
HaeIII	GGCC	5 cut(s)	570, 1619, 2230, 2318, 2352
HapII	CCGG	5 cut(s)	362, 737, 1771, 2002, 2408
HgaI	GACGC	1 cut(s)	737
HhaI	GCGC	4 cut(s)	195, 488, 1290, 2225
Hin1I	GRCGYC	2 cut(s)	193, 2223
Hin6I	GCGC	4 cut(s)	193, 486, 1288, 2223
HinP1I	GCGC	4 cut(s)	193, 486, 1288, 2223
HincII	GTYRAC	1 cut(s)	1131
HindII	GTYRAC	1 cut(s)	1131
HindIII	AAGCTT	3 cut(s)	284, 1062, 1418
HpaII	CCGG	5 cut(s)	362, 737, 1771, 2002, 2408
HphI	GGTGA	5 cut(s)	386, 1888, 2179, 2254, 2344
Hpy166II	GTNNAC	5 cut(s)	377, 863, 1131, 1398, 1934
Hpy8I	GTNNAC	5 cut(s)	377, 863, 1131, 1398, 1934
Hpy99I	CGWCG	2 cut(s)	753, 1802
HpyAV	CCTTC	5 cut(s)	215, 401, 529, 1804, 1850
HpyCH4IV	ACGT	2 cut(s)	10, 1474
HpyF10VI	GCNNNNNNNGC	6 cut(s)	494, 638, 1100, 1144, 2236, 2362
HpySE526I	ACGT	2 cut(s)	10, 1474
Hsp92I	GRCGYC	2 cut(s)	193, 2223
HspAI	GCGC	4 cut(s)	193, 486, 1288, 2223
KasI	GGCGCC	2 cut(s)	192, 2222
KflI	GGGWCCC	1 cut(s)	1583
Ksp22I	TGATCA	2 cut(s)	772, 2089
LmnI	GCTCC	7 cut(s)	611, 745, 1144, 1489, 1712, 1720, 2361
Lsp1109I	GCAGC	8 cut(s)	862, 934, 937, 1262, 1297, 1452, 2002, 2189
LweI	GCATC	5 cut(s)	336, 628, 844, 1291, 2164
MabI	ACCWGGT	2 cut(s)	379, 1720
MaeI	CTAG	3 cut(s)	1566, 1610, 2372
MaeII	ACGT	2 cut(s)	10, 1474
MaeIII	GTNAC	3 cut(s)	553, 893, 2332
MboII	GAAGA	9 cut(s)	315, 357, 800, 1199, 1612, 1658, 2170, 2315, 2318
MflI	RGATCY	5 cut(s)	214, 594, 733, 1212, 1546
MhlI	GDGCHC	3 cut(s)	865, 1317, 1717
MlsI	TGGCCA	2 cut(s)	2318, 2352
MluNI	TGGCCA	2 cut(s)	2318, 2352
Mly113I	GGCGCC	2 cut(s)	193, 2223
MlyI	GAGTC	6 cut(s)	59, 852, 1159, 1279, 1865, 2390
MmeI	TCCRAC	3 cut(s)	367, 589, 2100
Mox20I	TGGCCA	2 cut(s)	2318, 2352
MroXI	GAANNNNTTC	1 cut(s)	1518
MscI	TGGCCA	2 cut(s)	2318, 2352
MseI	TTAA	5 cut(s)	260, 467, 653, 1109, 1362
MslI	CAYNNNNRTG	5 cut(s)	1473, 1577, 1821, 1913, 2330
Msp20I	TGGCCA	2 cut(s)	2318, 2352
MspA1I	CMGCKG	3 cut(s)	1253, 1525, 1753
MspI	CCGG	5 cut(s)	362, 737, 1771, 2002, 2408
MspR9I	CCNGG	7 cut(s)	40, 362, 381, 1722, 2003, 2081, 2227
Mva1269I	GAATGC	1 cut(s)	1170
MvaI	CCWGG	5 cut(s)	40, 381, 1722, 2081, 2227
MvnI	CGCG	1 cut(s)	1290
MwoI	GCNNNNNNNGC	6 cut(s)	494, 638, 1100, 1144, 2236, 2362
NarI	GGCGCC	2 cut(s)	193, 2223
NciI	CCSGG	2 cut(s)	362, 2003
NlaIV	GGNNCC	6 cut(s)	194, 755, 1491, 1584, 1585, 2224
NmuCI	GTSAC	1 cut(s)	2332
NspI	RCATGY	1 cut(s)	1694
OliI	CACNNNNGTG	1 cut(s)	2330
PaeI	GCATGC	1 cut(s)	1694
PagI	TCATGA	2 cut(s)	1161, 2043
PaqCI	CACCTGC	2 cut(s)	312, 605
PctI	GAATGC	1 cut(s)	1170
PdmI	GAANNNNTTC	1 cut(s)	1518
PfeI	GAWTC	8 cut(s)	28, 179, 334, 423, 457, 560, 1662, 2402
PflMI	CCANNNNNTGG	1 cut(s)	2080
PkrI	GCNGC	8 cut(s)	877, 949, 952, 1252, 1287, 1467, 2017, 2179
PleI	GAGTC	6 cut(s)	59, 851, 1159, 1278, 1865, 2390
PluTI	GGCGCC	2 cut(s)	196, 2226
PpsI	GAGTC	6 cut(s)	59, 851, 1159, 1278, 1865, 2390
PpuMI	RGGWCCY	1 cut(s)	1583
Psp124BI	GAGCTC	2 cut(s)	1317, 1717
Psp5II	RGGWCCY	1 cut(s)	1583
Psp6I	CCWGG	5 cut(s)	38, 379, 1720, 2079, 2225
PspFI	CCCAGC	2 cut(s)	497, 2361
PspGI	CCWGG	5 cut(s)	38, 379, 1720, 2079, 2225
PspN4I	GGNNCC	6 cut(s)	194, 755, 1491, 1584, 1585, 2224
PspPI	GGNCC	5 cut(s)	568, 1583, 1618, 2083, 2122
PspPPI	RGGWCCY	1 cut(s)	1583
PstI	CTGCAG	1 cut(s)	1498
PstNI	CAGNNNCTG	2 cut(s)	1511, 2080
PsuI	RGATCY	5 cut(s)	214, 594, 733, 1212, 1546
PvuII	CAGCTG	2 cut(s)	1253, 1753
RsaI	GTAC	8 cut(s)	248, 543, 1265, 1679, 1885, 1940, 2007, 2063
RsaNI	GTAC	8 cut(s)	247, 542, 1264, 1678, 1884, 1939, 2006, 2062
RseI	CAYNNNNRTG	5 cut(s)	1473, 1577, 1821, 1913, 2330
SacI	GAGCTC	2 cut(s)	1317, 1717
SaqAI	TTAA	5 cut(s)	260, 467, 653, 1109, 1362
SatI	GCNGC	8 cut(s)	876, 948, 951, 1251, 1286, 1466, 2016, 2178
Sau96I	GGNCC	5 cut(s)	568, 1583, 1618, 2083, 2122
ScaI	AGTACT	1 cut(s)	543
SchI	GAGTC	6 cut(s)	59, 852, 1159, 1279, 1865, 2390
ScrFI	CCNGG	7 cut(s)	40, 362, 381, 1722, 2003, 2081, 2227
SduI	GDGCHC	3 cut(s)	865, 1317, 1717
SexAI	ACCWGGT	2 cut(s)	379, 1720
SfaNI	GCATC	5 cut(s)	336, 628, 844, 1291, 2164
SfcI	CTRYAG	4 cut(s)	174, 780, 1494, 2114
SfoI	GGCGCC	2 cut(s)	194, 2224
SinI	GGWCC	3 cut(s)	1583, 2083, 2122
SmiMI	CAYNNNNRTG	5 cut(s)	1473, 1577, 1821, 1913, 2330
SmlI	CTYRAG	2 cut(s)	105, 1208
SmoI	CTYRAG	2 cut(s)	105, 1208
SphI	GCATGC	1 cut(s)	1694
SsiI	CCGC	6 cut(s)	682, 847, 1084, 1525, 2149, 2239
SspDI	GGCGCC	2 cut(s)	192, 2222
SspI	AATATT	1 cut(s)	2028
SspMI	CTAG	3 cut(s)	1566, 1610, 2372
SstI	GAGCTC	2 cut(s)	1317, 1717
StyD4I	CCNGG	7 cut(s)	38, 360, 379, 1720, 2001, 2079, 2225
StyI	CCWWGG	2 cut(s)	153, 2274
TaiI	ACGT	2 cut(s)	13, 1477
TaqI	TCGA	8 cut(s)	81, 588, 670, 1317, 1665, 1797, 2184, 2259
TaqII	GACCGA	1 cut(s)	2139
TatI	WGTACW	4 cut(s)	541, 1677, 1938, 2061
TfiI	GAWTC	8 cut(s)	28, 179, 334, 423, 457, 560, 1662, 2402
Tru1I	TTAA	5 cut(s)	260, 467, 653, 1109, 1362
Tru9I	TTAA	5 cut(s)	260, 467, 653, 1109, 1362
TseFI	GTSAC	1 cut(s)	2332
TseI	GCWGC	8 cut(s)	875, 947, 950, 1250, 1285, 1465, 2015, 2177
Tsp45I	GTSAC	1 cut(s)	2332
TspDTI	ATGAA	9 cut(s)	246, 327, 470, 957, 1164, 1561, 2032, 2060, 2171
TspGWI	ACGGA	3 cut(s)	172, 264, 1658
Van91I	CCANNNNNTGG	1 cut(s)	2080
VneI	GTGCAC	1 cut(s)	861
VpaK11BI	GGWCC	3 cut(s)	1583, 2083, 2122
XapI	RAATTY	4 cut(s)	315, 518, 1276, 1845
XceI	RCATGY	1 cut(s)	1694
XcmI	CCANNNNNNNNNTGG	1 cut(s)	605
XmnI	GAANNNNTTC	1 cut(s)	1518
XspI	CTAG	3 cut(s)	1566, 1610, 2372
ZrmI	AGTACT	1 cut(s)	543

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.