Prupe.3G297100_v2.0.a1

Early nodulin-like protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
26378550 .. 26379486
937 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G297100.1

Sequence Viewer

Length: 456 bp
ATGGCTAACTGCAACATGAACTGTGCCAGAGCAACCCTGTTTTTGTTGACAATTTTCATCTGTTTTGGCCATTTCTCAGTCTCTGCCTATGATTTCCAAGTAGGTGGAACCAAAGATTGGGTTGTGCCTCCTACTAATGACAGCAAAATCTACAACGACTGGGCCTCCGGAAACCGGTTCCAAGTAGGCGACACCATTCGTTTTAAGTACAAGAAGAACTCTGTTATGGAGGTGACAGAGGAAGAGTTCAAGAAATGCAATTCAACTCGCCCCAACTTCTTCTCCAACACTGGAAATACAGTTTACCTGTTTGACCACGCCGGCTCTTTCTATTTCATCAGTGGAGCTTCTGGGCACTGCCAGAGAGGACAGCGCATGATCGTTAAGGTGATGTCCTTGGAGGAATCTCCTTCCAGCGACCGCAGATCTTCTGGCTCTCGTGCTGCGGTTTTCTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

152

Amino Acids

17.01

Weight (kDa)

8.87

Isoelectric Point (pI)

29.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013295)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 117
AccIII TCCGGA 1 cut(s) 167
AciI CCGC 2 cut(s) 421, 446
AcoI YGGCCR 1 cut(s) 67
AfaI GTAC 1 cut(s) 209
AfiI CCNNNNNNNGG 2 cut(s) 117, 174
AgeI ACCGGT 1 cut(s) 174
AgsI TTSAA 2 cut(s) 250, 264
AjuI GAANNNNNNNTTGG 2 cut(s) 100, 132
AluBI AGCT 1 cut(s) 347
AluI AGCT 1 cut(s) 347
Alw26I GTCTC 1 cut(s) 85
AlwNI CAGNNNCTG 1 cut(s) 83
Aor13HI TCCGGA 1 cut(s) 167
AoxI GGCC 2 cut(s) 67, 162
ApeKI GCWGC 1 cut(s) 443
AsiGI ACCGGT 1 cut(s) 174
AspLEI GCGC 1 cut(s) 375
AspS9I GGNCC 1 cut(s) 162
AsuHPI GGTGA 2 cut(s) 244, 400
BaeGI GKGCMC 1 cut(s) 357
BalI TGGCCA 1 cut(s) 69
BauI CACGAG 1 cut(s) 438
BbvI GCAGC 1 cut(s) 430
BcoDI GTCTC 1 cut(s) 85
BglII AGATCT 1 cut(s) 425
BisI GCNGC 1 cut(s) 444
BlsI GCNGC 1 cut(s) 445
BmgT120I GGNCC 1 cut(s) 162
BmiI GGNNCC 2 cut(s) 109, 179
BmrI ACTGGG 1 cut(s) 169
BmuI ACTGGG 1 cut(s) 169
BsaJI CCNNGG 1 cut(s) 396
BsaWI WCCGGW 2 cut(s) 167, 174
BsaXI ACNNNNNCTCC 4 cut(s) 149, 179, 266, 296
Bsc4I CCNNNNNNNGG 2 cut(s) 117, 174
Bse118I RCCGGY 2 cut(s) 174, 320
Bse1I ACTGG 2 cut(s) 164, 295
BseAI TCCGGA 1 cut(s) 167
BseDI CCNNGG 1 cut(s) 396
BseLI CCNNNNNNNGG 2 cut(s) 117, 174
BseMII CTCAG 1 cut(s) 90
BseNI ACTGG 2 cut(s) 164, 295
BseSI GKGCMC 1 cut(s) 357
BseXI GCAGC 1 cut(s) 430
Bsh1285I CGRYCG 1 cut(s) 421
BshFI GGCC 2 cut(s) 69, 164
BshTI ACCGGT 1 cut(s) 174
BsiEI CGRYCG 1 cut(s) 421
BsiSI CCGG 3 cut(s) 168, 175, 321
BslI CCNNNNNNNGG 2 cut(s) 117, 174
BsmAI GTCTC 1 cut(s) 85
BsnI GGCC 2 cut(s) 69, 164
Bsp1286I GDGCHC 1 cut(s) 357
Bsp13I TCCGGA 1 cut(s) 167
Bsp143I GATC 2 cut(s) 378, 425
BspACI CCGC 2 cut(s) 421, 446
BspANI GGCC 2 cut(s) 69, 164
BspCNI CTCAG 1 cut(s) 89
BspEI TCCGGA 1 cut(s) 167
BspLI GGNNCC 2 cut(s) 109, 179
BsrFI RCCGGY 2 cut(s) 174, 320
BsrI ACTGG 2 cut(s) 164, 295
BssAI RCCGGY 2 cut(s) 174, 320
BssECI CCNNGG 1 cut(s) 396
BssMI GATC 2 cut(s) 378, 425
BssSI CACGAG 1 cut(s) 438
BssT1I CCWWGG 1 cut(s) 396
Bst2BI CACGAG 1 cut(s) 438
Bst4CI ACNGT 2 cut(s) 23, 301
Bst6I CTCTTC 1 cut(s) 237
BstC8I GCNNGC 1 cut(s) 322
BstDEI CTNAG 1 cut(s) 76
BstHHI GCGC 1 cut(s) 375
BstKTI GATC 2 cut(s) 381, 428
BstMAI GTCTC 1 cut(s) 85
BstMBI GATC 2 cut(s) 378, 425
BstMCI CGRYCG 1 cut(s) 421
BstSLI GKGCMC 1 cut(s) 357
BstV1I GCAGC 1 cut(s) 430
BstX2I RGATCY 1 cut(s) 425
BstXI CCANNNNNNTGG 1 cut(s) 104
BstYI RGATCY 1 cut(s) 425
BsuRI GGCC 2 cut(s) 69, 164
BtsI GCAGTG 1 cut(s) 355
BtsIMutI CAGTG 3 cut(s) 288, 346, 355
Cac8I GCNNGC 1 cut(s) 322
CaiI CAGNNNCTG 1 cut(s) 83
CfoI GCGC 1 cut(s) 375
Cfr10I RCCGGY 2 cut(s) 174, 320
Cfr13I GGNCC 1 cut(s) 162
Csp6I GTAC 1 cut(s) 208
CspAI ACCGGT 1 cut(s) 174
CviAII CATG 2 cut(s) 16, 376
CviJI RGCY 6 cut(s) 5, 69, 164, 324, 347, 435
CviKI_1 RGCY 6 cut(s) 5, 69, 164, 324, 347, 435
CviQI GTAC 1 cut(s) 208
DdeI CTNAG 1 cut(s) 76
DpnI GATC 2 cut(s) 380, 427
DpnII GATC 2 cut(s) 378, 425
EaeI YGGCCR 1 cut(s) 67
Eam1104I CTCTTC 1 cut(s) 237
EarI CTCTTC 1 cut(s) 237
Eco130I CCWWGG 1 cut(s) 396
EcoT14I CCWWGG 1 cut(s) 396
ErhI CCWWGG 1 cut(s) 396
FaeI CATG 2 cut(s) 19, 379
FaiI YATR 4 cut(s) 17, 90, 227, 377
FatI CATG 2 cut(s) 15, 375
Fnu4HI GCNGC 1 cut(s) 444
Fsp4HI GCNGC 1 cut(s) 444
GlaI GCGC 1 cut(s) 374
GluI GCNGC 1 cut(s) 444
HaeIII GGCC 2 cut(s) 69, 164
HapII CCGG 3 cut(s) 168, 175, 321
HhaI GCGC 1 cut(s) 375
Hin1II CATG 2 cut(s) 19, 379
Hin6I GCGC 1 cut(s) 373
HinP1I GCGC 1 cut(s) 373
HincII GTYRAC 1 cut(s) 48
HindII GTYRAC 1 cut(s) 48
HinfI GANTC 1 cut(s) 404
HpaII CCGG 3 cut(s) 168, 175, 321
HphI GGTGA 2 cut(s) 244, 400
Hpy166II GTNNAC 2 cut(s) 48, 304
Hpy188I TCNGA 1 cut(s) 455
Hpy188III TCNNGA 2 cut(s) 168, 250
Hpy8I GTNNAC 2 cut(s) 48, 304
HpyAV CCTTC 1 cut(s) 420
HpyCH4III ACNGT 2 cut(s) 23, 301
HpyCH4V TGCA 2 cut(s) 12, 258
HpyF3I CTNAG 1 cut(s) 76
Hsp92II CATG 2 cut(s) 19, 379
HspAI GCGC 1 cut(s) 373
Kpn2I TCCGGA 1 cut(s) 167
KroI GCCGGC 1 cut(s) 320
KroNI GCCGGC 1 cut(s) 322
Kzo9I GATC 2 cut(s) 378, 425
LmnI GCTCC 1 cut(s) 344
Lsp1109I GCAGC 1 cut(s) 430
MaeIII GTNAC 1 cut(s) 232
MalI GATC 2 cut(s) 380, 427
MboI GATC 2 cut(s) 378, 425
MboII GAAGA 4 cut(s) 226, 254, 271, 420
MflI RGATCY 1 cut(s) 425
MhlI GDGCHC 1 cut(s) 357
MlsI TGGCCA 1 cut(s) 69
MluCI AATT 2 cut(s) 51, 259
MluNI TGGCCA 1 cut(s) 69
MmeI TCCRAC 1 cut(s) 309
MnlI CCTC 6 cut(s) 138, 175, 223, 232, 359, 394
Mox20I TGGCCA 1 cut(s) 69
MroI TCCGGA 1 cut(s) 167
MroNI GCCGGC 1 cut(s) 320
MscI TGGCCA 1 cut(s) 69
MseI TTAA 2 cut(s) 204, 384
Msp20I TGGCCA 1 cut(s) 69
MspI CCGG 3 cut(s) 168, 175, 321
NaeI GCCGGC 1 cut(s) 322
NdeII GATC 2 cut(s) 378, 425
NgoMIV GCCGGC 1 cut(s) 320
NlaIII CATG 2 cut(s) 19, 379
NlaIV GGNNCC 2 cut(s) 109, 179
NmuCI GTSAC 1 cut(s) 232
PdiI GCCGGC 1 cut(s) 322
PfeI GAWTC 1 cut(s) 404
PflMI CCANNNNNTGG 1 cut(s) 117
PinAI ACCGGT 1 cut(s) 174
PkrI GCNGC 1 cut(s) 445
PspN4I GGNNCC 2 cut(s) 109, 179
PspPI GGNCC 1 cut(s) 162
PstNI CAGNNNCTG 1 cut(s) 83
PsuI RGATCY 1 cut(s) 425
RsaI GTAC 1 cut(s) 209
RsaNI GTAC 1 cut(s) 208
SaqAI TTAA 2 cut(s) 204, 384
SatI GCNGC 1 cut(s) 444
Sau3AI GATC 2 cut(s) 378, 425
Sau96I GGNCC 1 cut(s) 162
SduI GDGCHC 1 cut(s) 357
SetI ASST 5 cut(s) 106, 234, 309, 349, 390
Sse9I AATT 2 cut(s) 51, 259
SsiI CCGC 2 cut(s) 421, 446
StyI CCWWGG 1 cut(s) 396
TaaI ACNGT 2 cut(s) 23, 301
TasI AATT 2 cut(s) 51, 259
TatI WGTACW 1 cut(s) 207
TfiI GAWTC 1 cut(s) 404
Tru1I TTAA 2 cut(s) 204, 384
Tru9I TTAA 2 cut(s) 204, 384
TscAI CASTG 3 cut(s) 295, 346, 362
TseFI GTSAC 1 cut(s) 232
TseI GCWGC 1 cut(s) 443
Tsp45I GTSAC 1 cut(s) 232
TspDTI ATGAA 3 cut(s) 32, 46, 325
TspRI CASTG 3 cut(s) 295, 346, 362
Van91I CCANNNNNTGG 1 cut(s) 117
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.