Prohibitin-3
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G27280 AT3G27280 AT5G40770 |
| fragaria_vesca | FvH4_6g52780 |
| malus_domestica | MD09G1016800.v1.1 MD17G1017200.v1.1 |
| prunus_persica | Prupe.3G300700_v2.0.a1 Prupe.3G300700_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0174411 |
| rosa_laevigata | RLG00000022263 |
| rosa_multiflora | Rmu_co8273923.1_g000001 Rmu_sc0003649.1_g000029 |
| rosa_roxburghii | Rroxscaffold_2G00078240 |
| rosa_rugosa | Rorug02G0576500 |
| rosa_samantha | Rh2AG657700 Rh2BG668800 Rh2CG631700 Rh2DG682300 |
| rosa_wichuraiana | Rw2G053870 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 565 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 161, 365 |
| Acc36I | ACCTGC | 2 cut(s) | 565, 801 |
| AccB1I | GGYRCC | 3 cut(s) | 65, 71, 257 |
| AccI | GTMKAC | 1 cut(s) | 105 |
| AccII | CGCG | 6 cut(s) | 120, 304, 556, 639, 644, 695 |
| AciI | CCGC | 7 cut(s) | 51, 111, 319, 481, 593, 642, 707 |
| AclWI | GGATC | 4 cut(s) | 181, 273, 472, 743 |
| AcuI | CTGAAG | 1 cut(s) | 416 |
| AcvI | CACGTG | 1 cut(s) | 451 |
| AcyI | GRCGYC | 2 cut(s) | 66, 72 |
| AfaI | GTAC | 3 cut(s) | 226, 356, 539 |
| AfeI | AGCGCT | 1 cut(s) | 599 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 57, 380, 490, 589 |
| AflIII | ACRYGT | 1 cut(s) | 450 |
| AgsI | TTSAA | 4 cut(s) | 337, 418, 499, 566 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 441 |
| AjiI | CACGTC | 1 cut(s) | 517 |
| AjnI | CCWGG | 4 cut(s) | 657, 746, 770, 796 |
| AluBI | AGCT | 5 cut(s) | 17, 430, 474, 682, 727 |
| AluI | AGCT | 5 cut(s) | 17, 430, 474, 682, 727 |
| Alw21I | GWGCWC | 2 cut(s) | 129, 729 |
| Alw26I | GTCTC | 1 cut(s) | 256 |
| AlwI | GGATC | 4 cut(s) | 181, 273, 472, 743 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 433 |
| Ama87I | CYCGRG | 2 cut(s) | 308, 350 |
| Aor51HI | AGCGCT | 1 cut(s) | 599 |
| AoxI | GGCC | 4 cut(s) | 230, 399, 579, 741 |
| ApeKI | GCWGC | 3 cut(s) | 17, 674, 758 |
| AscI | GGCGCGCC | 1 cut(s) | 637 |
| AspA2I | CCTAGG | 1 cut(s) | 343 |
| AspLEI | GCGC | 7 cut(s) | 68, 74, 120, 122, 600, 639, 641 |
| AspS9I | GGNCC | 5 cut(s) | 174, 231, 295, 367, 580 |
| AsuC2I | CCSGG | 1 cut(s) | 229 |
| AsuHPI | GGTGA | 4 cut(s) | 25, 277, 289, 674 |
| AvaI | CYCGRG | 2 cut(s) | 308, 350 |
| AvaII | GGWCC | 3 cut(s) | 174, 295, 367 |
| AvrII | CCTAGG | 1 cut(s) | 343 |
| AxyI | CCTNAGG | 1 cut(s) | 290 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 208, 241 |
| BanI | GGYRCC | 3 cut(s) | 65, 71, 257 |
| BanII | GRGCYC | 4 cut(s) | 63, 351, 658, 729 |
| BauI | CACGAG | 1 cut(s) | 45 |
| BbrPI | CACGTG | 1 cut(s) | 451 |
| BbsI | GAAGAC | 1 cut(s) | 626 |
| Bbv12I | GWGCWC | 2 cut(s) | 129, 729 |
| BbvI | GCAGC | 3 cut(s) | 4, 661, 745 |
| BccI | CCATC | 4 cut(s) | 86, 268, 386, 538 |
| BceAI | ACGGC | 6 cut(s) | 5, 107, 124, 386, 468, 545 |
| BciT130I | CCWGG | 4 cut(s) | 659, 748, 772, 798 |
| BcnI | CCSGG | 1 cut(s) | 229 |
| BcoDI | GTCTC | 1 cut(s) | 256 |
| BfaI | CTAG | 1 cut(s) | 344 |
| BfmI | CTRYAG | 1 cut(s) | 269 |
| BfoI | RGCGCY | 3 cut(s) | 69, 75, 601 |
| BfuAI | ACCTGC | 2 cut(s) | 565, 801 |
| BglII | AGATCT | 1 cut(s) | 330 |
| BisI | GCNGC | 5 cut(s) | 18, 51, 642, 675, 759 |
| BlnI | CCTAGG | 1 cut(s) | 343 |
| BlsI | GCNGC | 5 cut(s) | 19, 52, 643, 676, 760 |
| Bme1390I | CCNGG | 5 cut(s) | 229, 659, 748, 772, 798 |
| Bme18I | GGWCC | 3 cut(s) | 174, 295, 367 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 441 |
| BmeT110I | CYCGRG | 2 cut(s) | 308, 350 |
| BmgBI | CACGTC | 1 cut(s) | 517 |
| BmgT120I | GGNCC | 5 cut(s) | 174, 231, 295, 367, 580 |
| BmiI | GGNNCC | 8 cut(s) | 67, 73, 175, 176, 197, 233, 259, 296 |
| BmrFI | CCNGG | 5 cut(s) | 229, 659, 748, 772, 798 |
| BoxI | GACNNNNGTC | 1 cut(s) | 111 |
| BpiI | GAAGAC | 1 cut(s) | 626 |
| BpmI | CTGGAG | 2 cut(s) | 182, 730 |
| Bpu10I | CCTNAGC | 1 cut(s) | 489 |
| BpuMI | CCSGG | 1 cut(s) | 229 |
| BsaAI | YACGTR | 1 cut(s) | 451 |
| BsaHI | GRCGYC | 2 cut(s) | 66, 72 |
| BsaI | GGTCTC | 1 cut(s) | 256 |
| BsaJI | CCNNGG | 8 cut(s) | 142, 191, 261, 309, 343, 657, 658, 747 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 57, 380, 490, 589 |
| Bse118I | RCCGGY | 1 cut(s) | 68 |
| Bse21I | CCTNAGG | 1 cut(s) | 290 |
| BseBI | CCWGG | 4 cut(s) | 659, 748, 772, 798 |
| BseDI | CCNNGG | 8 cut(s) | 142, 191, 261, 309, 343, 657, 658, 747 |
| BseGI | GGATG | 3 cut(s) | 219, 517, 549 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 57, 380, 490, 589 |
| BseMII | CTCAG | 3 cut(s) | 304, 318, 742 |
| BsePI | GCGCGC | 2 cut(s) | 118, 637 |
| BseRI | GAGGAG | 1 cut(s) | 79 |
| BseXI | GCAGC | 3 cut(s) | 4, 661, 745 |
| BseYI | CCCAGC | 1 cut(s) | 582 |
| Bsh1236I | CGCG | 6 cut(s) | 120, 304, 556, 639, 644, 695 |
| Bsh1285I | CGRYCG | 1 cut(s) | 136 |
| BshFI | GGCC | 4 cut(s) | 232, 401, 581, 743 |
| BshNI | GGYRCC | 3 cut(s) | 65, 71, 257 |
| BsiEI | CGRYCG | 1 cut(s) | 136 |
| BsiHKAI | GWGCWC | 2 cut(s) | 129, 729 |
| BsiHKCI | CYCGRG | 2 cut(s) | 308, 350 |
| BsiSI | CCGG | 3 cut(s) | 69, 229, 255 |
| BsiWI | CGTACG | 1 cut(s) | 537 |
| BslFI | GGGAC | 4 cut(s) | 187, 291, 301, 729 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 57, 380, 490, 589 |
| BsmAI | GTCTC | 1 cut(s) | 256 |
| BsmFI | GGGAC | 4 cut(s) | 187, 291, 301, 729 |
| BsnI | GGCC | 4 cut(s) | 232, 401, 581, 743 |
| Bso31I | GGTCTC | 1 cut(s) | 256 |
| BsoBI | CYCGRG | 2 cut(s) | 308, 350 |
| Bsp1286I | GDGCHC | 5 cut(s) | 63, 129, 351, 658, 729 |
| Bsp143I | GATC | 7 cut(s) | 186, 265, 330, 424, 477, 720, 735 |
| BspACI | CCGC | 7 cut(s) | 51, 111, 319, 481, 593, 642, 707 |
| BspANI | GGCC | 4 cut(s) | 232, 401, 581, 743 |
| BspCNI | CTCAG | 3 cut(s) | 303, 319, 741 |
| BspFNI | CGCG | 6 cut(s) | 120, 304, 556, 639, 644, 695 |
| BspLI | GGNNCC | 8 cut(s) | 67, 73, 175, 176, 197, 233, 259, 296 |
| BspMAI | CTGCAG | 1 cut(s) | 273 |
| BspMI | ACCTGC | 2 cut(s) | 565, 801 |
| BspPI | GGATC | 4 cut(s) | 181, 273, 472, 743 |
| BspQI | GCTCTTC | 1 cut(s) | 134 |
| BspT107I | GGYRCC | 3 cut(s) | 65, 71, 257 |
| BspTNI | GGTCTC | 1 cut(s) | 256 |
| BsrFI | RCCGGY | 1 cut(s) | 68 |
| BssAI | RCCGGY | 1 cut(s) | 68 |
| BssECI | CCNNGG | 8 cut(s) | 142, 191, 261, 309, 343, 657, 658, 747 |
| BssHII | GCGCGC | 2 cut(s) | 118, 637 |
| BssMI | GATC | 7 cut(s) | 186, 265, 330, 424, 477, 720, 735 |
| BssNI | GRCGYC | 2 cut(s) | 66, 72 |
| BssSI | CACGAG | 1 cut(s) | 45 |
| BssT1I | CCWWGG | 2 cut(s) | 261, 343 |
| Bst2BI | CACGAG | 1 cut(s) | 45 |
| Bst2UI | CCWGG | 4 cut(s) | 659, 748, 772, 798 |
| Bst4CI | ACNGT | 3 cut(s) | 103, 137, 163 |
| Bst6I | CTCTTC | 2 cut(s) | 134, 250 |
| BstACI | GRCGYC | 2 cut(s) | 66, 72 |
| BstBAI | YACGTR | 1 cut(s) | 451 |
| BstC8I | GCNNGC | 5 cut(s) | 70, 120, 558, 639, 768 |
| BstDEI | CTNAG | 4 cut(s) | 290, 327, 489, 728 |
| BstDSI | CCRYGG | 2 cut(s) | 142, 191 |
| BstF5I | GGATG | 3 cut(s) | 219, 517, 549 |
| BstFNI | CGCG | 6 cut(s) | 120, 304, 556, 639, 644, 695 |
| BstH2I | RGCGCY | 3 cut(s) | 69, 75, 601 |
| BstHHI | GCGC | 7 cut(s) | 68, 74, 120, 122, 600, 639, 641 |
| BstKTI | GATC | 7 cut(s) | 189, 268, 333, 427, 480, 723, 738 |
| BstMAI | GTCTC | 1 cut(s) | 256 |
| BstMBI | GATC | 7 cut(s) | 186, 265, 330, 424, 477, 720, 735 |
| BstMCI | CGRYCG | 1 cut(s) | 136 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 50, 117, 124, 202, 407, 480, 634, 767 |
| BstNI | CCWGG | 4 cut(s) | 659, 748, 772, 798 |
| BstNSI | RCATGY | 1 cut(s) | 814 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 111 |
| BstSCI | CCNGG | 5 cut(s) | 227, 657, 746, 770, 796 |
| BstSFI | CTRYAG | 1 cut(s) | 269 |
| BstUI | CGCG | 6 cut(s) | 120, 304, 556, 639, 644, 695 |
| BstV1I | GCAGC | 3 cut(s) | 4, 661, 745 |
| BstV2I | GAAGAC | 1 cut(s) | 626 |
| BstX2I | RGATCY | 2 cut(s) | 265, 330 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 610 |
| BstYI | RGATCY | 2 cut(s) | 265, 330 |
| Bsu36I | CCTNAGG | 1 cut(s) | 290 |
| BsuRI | GGCC | 4 cut(s) | 232, 401, 581, 743 |
| BtgI | CCRYGG | 2 cut(s) | 142, 191 |
| BtrI | CACGTC | 1 cut(s) | 517 |
| BtsCI | GGATG | 3 cut(s) | 219, 517, 549 |
| BveI | ACCTGC | 2 cut(s) | 565, 801 |
| Cac8I | GCNNGC | 5 cut(s) | 70, 120, 558, 639, 768 |
| CaiI | CAGNNNCTG | 1 cut(s) | 433 |
| CfoI | GCGC | 7 cut(s) | 68, 74, 120, 122, 600, 639, 641 |
| Cfr10I | RCCGGY | 1 cut(s) | 68 |
| Cfr13I | GGNCC | 5 cut(s) | 174, 231, 295, 367, 580 |
| CseI | GACGC | 4 cut(s) | 293, 431, 690, 701 |
| Csp6I | GTAC | 3 cut(s) | 225, 355, 538 |
| CviAII | CATG | 1 cut(s) | 811 |
| CviQI | GTAC | 3 cut(s) | 225, 355, 538 |
| DdeI | CTNAG | 4 cut(s) | 290, 327, 489, 728 |
| DinI | GGCGCC | 2 cut(s) | 67, 73 |
| DpnI | GATC | 7 cut(s) | 188, 267, 332, 426, 479, 722, 737 |
| DpnII | GATC | 7 cut(s) | 186, 265, 330, 424, 477, 720, 735 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 161, 365 |
| DriI | GACNNNNNGTC | 1 cut(s) | 441 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 161, 365 |
| Eam1104I | CTCTTC | 2 cut(s) | 134, 250 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 441 |
| EarI | CTCTTC | 2 cut(s) | 134, 250 |
| EciI | GGCGGA | 2 cut(s) | 470, 608 |
| Ecl136II | GAGCTC | 1 cut(s) | 727 |
| Eco130I | CCWWGG | 2 cut(s) | 261, 343 |
| Eco147I | AGGCCT | 1 cut(s) | 743 |
| Eco24I | GRGCYC | 4 cut(s) | 63, 351, 658, 729 |
| Eco31I | GGTCTC | 1 cut(s) | 256 |
| Eco47I | GGWCC | 3 cut(s) | 174, 295, 367 |
| Eco47III | AGCGCT | 1 cut(s) | 599 |
| Eco53kI | GAGCTC | 1 cut(s) | 727 |
| Eco57I | CTGAAG | 1 cut(s) | 416 |
| Eco72I | CACGTG | 1 cut(s) | 451 |
| Eco81I | CCTNAGG | 1 cut(s) | 290 |
| Eco88I | CYCGRG | 2 cut(s) | 308, 350 |
| EcoICRI | GAGCTC | 1 cut(s) | 727 |
| EcoO109I | RGGNCCY | 3 cut(s) | 174, 295, 367 |
| EcoRII | CCWGG | 4 cut(s) | 657, 746, 770, 796 |
| EcoT14I | CCWWGG | 2 cut(s) | 261, 343 |
| EcoT38I | GRGCYC | 4 cut(s) | 63, 351, 658, 729 |
| EgeI | GGCGCC | 2 cut(s) | 67, 73 |
| EheI | GGCGCC | 2 cut(s) | 67, 73 |
| ErhI | CCWWGG | 2 cut(s) | 261, 343 |
| FaeI | CATG | 1 cut(s) | 814 |
| FaiI | YATR | 1 cut(s) | 812 |
| FaqI | GGGAC | 4 cut(s) | 187, 291, 301, 729 |
| FatI | CATG | 1 cut(s) | 810 |
| FauI | CCCGC | 2 cut(s) | 326, 700 |
| FblI | GTMKAC | 1 cut(s) | 105 |
| Fnu4HI | GCNGC | 5 cut(s) | 18, 51, 642, 675, 759 |
| FokI | GGATG | 3 cut(s) | 206, 524, 556 |
| FriOI | GRGCYC | 4 cut(s) | 63, 351, 658, 729 |
| Fsp4HI | GCNGC | 5 cut(s) | 18, 51, 642, 675, 759 |
| FspBI | CTAG | 1 cut(s) | 344 |
| GlaI | GCGC | 7 cut(s) | 67, 73, 119, 121, 599, 638, 640 |
| GluI | GCNGC | 5 cut(s) | 18, 51, 642, 675, 759 |
| GsaI | CCCAGC | 1 cut(s) | 586 |
| GsuI | CTGGAG | 2 cut(s) | 182, 730 |
| HaeII | RGCGCY | 3 cut(s) | 69, 75, 601 |
| HaeIII | GGCC | 4 cut(s) | 232, 401, 581, 743 |
| HapII | CCGG | 3 cut(s) | 69, 229, 255 |
| HgaI | GACGC | 4 cut(s) | 293, 431, 690, 701 |
| HhaI | GCGC | 7 cut(s) | 68, 74, 120, 122, 600, 639, 641 |
| Hin1I | GRCGYC | 2 cut(s) | 66, 72 |
| Hin1II | CATG | 1 cut(s) | 814 |
| Hin6I | GCGC | 7 cut(s) | 66, 72, 118, 120, 598, 637, 639 |
| HinP1I | GCGC | 7 cut(s) | 66, 72, 118, 120, 598, 637, 639 |
| HincII | GTYRAC | 2 cut(s) | 85, 106 |
| HindII | GTYRAC | 2 cut(s) | 85, 106 |
| HinfI | GANTC | 1 cut(s) | 147 |
| HpaII | CCGG | 3 cut(s) | 69, 229, 255 |
| HphI | GGTGA | 4 cut(s) | 25, 277, 289, 674 |
| Hpy166II | GTNNAC | 3 cut(s) | 85, 106, 280 |
| Hpy188I | TCNGA | 5 cut(s) | 186, 383, 435, 691, 731 |
| Hpy188III | TCNNGA | 2 cut(s) | 199, 308 |
| Hpy8I | GTNNAC | 3 cut(s) | 85, 106, 280 |
| Hpy99I | CGWCG | 6 cut(s) | 107, 110, 158, 167, 362, 407 |
| HpyAV | CCTTC | 6 cut(s) | 37, 64, 250, 358, 391, 726 |
| HpyCH4III | ACNGT | 3 cut(s) | 103, 137, 163 |
| HpyCH4IV | ACGT | 2 cut(s) | 450, 516 |
| HpyCH4V | TGCA | 1 cut(s) | 271 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 50, 117, 124, 202, 407, 480, 634, 767 |
| HpyF3I | CTNAG | 4 cut(s) | 290, 327, 489, 728 |
| HpySE526I | ACGT | 2 cut(s) | 450, 516 |
| Hsp92I | GRCGYC | 2 cut(s) | 66, 72 |
| Hsp92II | CATG | 1 cut(s) | 814 |
| HspAI | GCGC | 7 cut(s) | 66, 72, 118, 120, 598, 637, 639 |
| KasI | GGCGCC | 2 cut(s) | 65, 71 |
| KflI | GGGWCCC | 1 cut(s) | 174 |
| KroI | GCCGGC | 1 cut(s) | 68 |
| KroNI | GCCGGC | 1 cut(s) | 70 |
| Kzo9I | GATC | 7 cut(s) | 186, 265, 330, 424, 477, 720, 735 |
| LguI | GCTCTTC | 1 cut(s) | 134 |
| LmnI | GCTCC | 5 cut(s) | 201, 439, 595, 605, 625 |
| Lsp1109I | GCAGC | 3 cut(s) | 4, 661, 745 |
| MaeI | CTAG | 1 cut(s) | 344 |
| MaeII | ACGT | 2 cut(s) | 450, 516 |
| MalI | GATC | 7 cut(s) | 188, 267, 332, 426, 479, 722, 737 |
| MboI | GATC | 7 cut(s) | 186, 265, 330, 424, 477, 720, 735 |
| MboII | GAAGA | 6 cut(s) | 121, 205, 237, 325, 631, 817 |
| MflI | RGATCY | 2 cut(s) | 265, 330 |
| MhlI | GDGCHC | 5 cut(s) | 63, 129, 351, 658, 729 |
| MluCI | AATT | 1 cut(s) | 413 |
| Mly113I | GGCGCC | 2 cut(s) | 66, 72 |
| MlyI | GAGTC | 1 cut(s) | 156 |
| MreI | CGCCGGCG | 1 cut(s) | 68 |
| MroNI | GCCGGC | 1 cut(s) | 68 |
| MspI | CCGG | 3 cut(s) | 69, 229, 255 |
| MspR9I | CCNGG | 5 cut(s) | 229, 659, 748, 772, 798 |
| MvaI | CCWGG | 4 cut(s) | 659, 748, 772, 798 |
| MvnI | CGCG | 6 cut(s) | 120, 304, 556, 639, 644, 695 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 50, 117, 124, 202, 407, 480, 634, 767 |
| NaeI | GCCGGC | 1 cut(s) | 70 |
| NarI | GGCGCC | 2 cut(s) | 66, 72 |
| NciI | CCSGG | 1 cut(s) | 229 |
| NdeII | GATC | 7 cut(s) | 186, 265, 330, 424, 477, 720, 735 |
| NgoMIV | GCCGGC | 1 cut(s) | 68 |
| NlaIII | CATG | 1 cut(s) | 814 |
| NlaIV | GGNNCC | 8 cut(s) | 67, 73, 175, 176, 197, 233, 259, 296 |
| NmeAIII | GCCGAG | 1 cut(s) | 42 |
| NspI | RCATGY | 1 cut(s) | 814 |
| PaeR7I | CTCGAG | 1 cut(s) | 350 |
| PalAI | GGCGCGCC | 1 cut(s) | 637 |
| PaqCI | CACCTGC | 1 cut(s) | 565 |
| PasI | CCCWGGG | 1 cut(s) | 658 |
| PauI | GCGCGC | 2 cut(s) | 118, 637 |
| PceI | AGGCCT | 1 cut(s) | 743 |
| PciSI | GCTCTTC | 1 cut(s) | 134 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 159, 357, 533 |
| PdiI | GCCGGC | 1 cut(s) | 70 |
| Pfl23II | CGTACG | 1 cut(s) | 537 |
| PflFI | GACNNNGTC | 2 cut(s) | 161, 700 |
| PkrI | GCNGC | 5 cut(s) | 19, 52, 643, 676, 760 |
| PleI | GAGTC | 1 cut(s) | 155 |
| PluTI | GGCGCC | 2 cut(s) | 69, 75 |
| PmaCI | CACGTG | 1 cut(s) | 451 |
| PmlI | CACGTG | 1 cut(s) | 451 |
| PpsI | GAGTC | 1 cut(s) | 155 |
| Ppu21I | YACGTR | 1 cut(s) | 451 |
| PpuMI | RGGWCCY | 3 cut(s) | 174, 295, 367 |
| PshAI | GACNNNNGTC | 1 cut(s) | 111 |
| Psp124BI | GAGCTC | 1 cut(s) | 729 |
| Psp5II | RGGWCCY | 3 cut(s) | 174, 295, 367 |
| Psp6I | CCWGG | 4 cut(s) | 657, 746, 770, 796 |
| PspCI | CACGTG | 1 cut(s) | 451 |
| PspFI | CCCAGC | 1 cut(s) | 582 |
| PspGI | CCWGG | 4 cut(s) | 657, 746, 770, 796 |
| PspLI | CGTACG | 1 cut(s) | 537 |
| PspN4I | GGNNCC | 8 cut(s) | 67, 73, 175, 176, 197, 233, 259, 296 |
| PspPI | GGNCC | 5 cut(s) | 174, 231, 295, 367, 580 |
| PspPPI | RGGWCCY | 3 cut(s) | 174, 295, 367 |
| PspXI | VCTCGAGB | 1 cut(s) | 350 |
| PstI | CTGCAG | 1 cut(s) | 273 |
| PstNI | CAGNNNCTG | 1 cut(s) | 433 |
| PsuI | RGATCY | 2 cut(s) | 265, 330 |
| PsyI | GACNNNGTC | 2 cut(s) | 161, 700 |
| PteI | GCGCGC | 2 cut(s) | 118, 637 |
| RsaI | GTAC | 3 cut(s) | 226, 356, 539 |
| RsaNI | GTAC | 3 cut(s) | 225, 355, 538 |
| SacI | GAGCTC | 1 cut(s) | 729 |
| SalI | GTCGAC | 1 cut(s) | 104 |
| SapI | GCTCTTC | 1 cut(s) | 134 |
| SatI | GCNGC | 5 cut(s) | 18, 51, 642, 675, 759 |
| Sau3AI | GATC | 7 cut(s) | 186, 265, 330, 424, 477, 720, 735 |
| Sau96I | GGNCC | 5 cut(s) | 174, 231, 295, 367, 580 |
| SchI | GAGTC | 1 cut(s) | 156 |
| ScrFI | CCNGG | 5 cut(s) | 229, 659, 748, 772, 798 |
| SduI | GDGCHC | 5 cut(s) | 63, 129, 351, 658, 729 |
| SfcI | CTRYAG | 1 cut(s) | 269 |
| SfoI | GGCGCC | 2 cut(s) | 67, 73 |
| Sfr274I | CTCGAG | 1 cut(s) | 350 |
| SgrAI | CRCCGGYG | 1 cut(s) | 68 |
| SgrDI | CGTCGACG | 1 cut(s) | 104 |
| SgsI | GGCGCGCC | 1 cut(s) | 637 |
| SinI | GGWCC | 3 cut(s) | 174, 295, 367 |
| SlaI | CTCGAG | 1 cut(s) | 350 |
| SmlI | CTYRAG | 1 cut(s) | 350 |
| SmoI | CTYRAG | 1 cut(s) | 350 |
| Sse9I | AATT | 1 cut(s) | 413 |
| SseBI | AGGCCT | 1 cut(s) | 743 |
| SsiI | CCGC | 7 cut(s) | 51, 111, 319, 481, 593, 642, 707 |
| SspDI | GGCGCC | 2 cut(s) | 65, 71 |
| SspMI | CTAG | 1 cut(s) | 344 |
| SstI | GAGCTC | 1 cut(s) | 729 |
| StuI | AGGCCT | 1 cut(s) | 743 |
| StyD4I | CCNGG | 5 cut(s) | 227, 657, 746, 770, 796 |
| StyI | CCWWGG | 2 cut(s) | 261, 343 |
| TaaI | ACNGT | 3 cut(s) | 103, 137, 163 |
| TaiI | ACGT | 2 cut(s) | 453, 519 |
| TaqI | TCGA | 8 cut(s) | 105, 132, 153, 216, 351, 652, 723, 738 |
| TaqII | GACCGA | 1 cut(s) | 238 |
| TasI | AATT | 1 cut(s) | 413 |
| TauI | GCSGC | 2 cut(s) | 53, 644 |
| TseI | GCWGC | 3 cut(s) | 17, 674, 758 |
| TspGWI | ACGGA | 4 cut(s) | 131, 212, 452, 638 |
| Tth111I | GACNNNGTC | 2 cut(s) | 161, 700 |
| VpaK11BI | GGWCC | 3 cut(s) | 174, 295, 367 |
| XceI | RCATGY | 1 cut(s) | 814 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 610 |
| XhoI | CTCGAG | 1 cut(s) | 350 |
| XmaJI | CCTAGG | 1 cut(s) | 343 |
| XmiI | GTMKAC | 1 cut(s) | 105 |
| XspI | CTAG | 1 cut(s) | 344 |