Rh2CG631700

Prohibitin-3

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Reverse (-)
80393486 .. 80395757
2272 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG631700.1

Sequence Viewer

Length: 840 bp
ATGGGAAGCAACCAAGCCGCCGTGTCCTTCCTCACCAACCTGGCACGCGCCGCCTTCGGCCTCGGCGCCGGCGCCACCATCGTCAACTCGGCCCTGTACACCGTCGACGGCGGCCAGCGCGCCGTCCTCTTCGACCGTTTCCGCGGCGTCATCGACGAGACCGTCGGCGAAGGCACCCACTTCCTGGTCCCGTGGCTGCAGAAGCCCTACATCTTCGACATCAGGACCCGCCCCCACACCTTCTCCTCCATCTCCGGCACCAAGGATCTTCAGATGGTCAACCTCACTCTGAGGGTTCTCTCCCGCCCGGAGGTCAGTCGCCTCCCTCAGATCTTCAAAACCCTGGGGCTCGAGTACGACGAGAAGGTCCTCCCGTCGATCGGGAACGAGGTTCTCAAGGCGGTGGTGGCGCAGTTCAACGCCGATCAGCTCCTGACGGAGCGGCCGCACGTGTCGGCGCTGGTGCGGGAGAGCTTGATCCGCAGGGCTAAGGATTTCAACATTGAGCTGGACGACGTGGCCATCACGCACTTGTCGTACGGGGCGGAGTTCTCACGCGCCGTCGAGCAGAAGCAGGTGGCGCAGCAGGAGGCGGAGCGGTCCAAGTTTGTTGTGGCGAAGGCGGAGCAGGAGAGGAGGGCTGCTATTATCAGGGCTCAGGGTGAGAGTGAATCTGCTAAGCTGATTTCGGAGGCGACTGCCGCTGCCGGAAGTGACTTGATTGAACTCCGAAGGATTGAAGCTAGTAGAGAGATAGCCGCCACGCTCGCCAAGTCGCCCAATGTCAACTACCTGCCTAAGGGGAACCAGGTCCTCTTCGGCCTCGGTGGTGGTCGTTGA

Protein Analysis

279

Amino Acids

30.52

Weight (kDa)

8.8

Isoelectric Point (pI)

42.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Band_7 PF01145 34 - 211 3.5e-29 SPFH domain / Band 7 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011982)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 565
AasI GACNNNNNNGTC 2 cut(s) 161, 365
Acc36I ACCTGC 2 cut(s) 565, 801
AccB1I GGYRCC 4 cut(s) 65, 71, 173, 257
AccB7I CCANNNNNTGG 1 cut(s) 184
AccBSI CCGCTC 2 cut(s) 442, 598
AccI GTMKAC 1 cut(s) 105
AccII CGCG 4 cut(s) 48, 120, 144, 558
AclWI GGATC 2 cut(s) 273, 472
AcoI YGGCCR 3 cut(s) 112, 443, 519
AcuI CTGAAG 1 cut(s) 254
AcvI CACGTG 1 cut(s) 451
AcyI GRCGYC 3 cut(s) 66, 72, 147
AfaI GTAC 3 cut(s) 98, 356, 539
AfiI CCNNNNNNNGG 4 cut(s) 184, 310, 380, 799
AflIII ACRYGT 1 cut(s) 450
AgsI TTSAA 5 cut(s) 337, 418, 499, 725, 740
AjiI CACGTC 1 cut(s) 517
AjnI CCWGG 4 cut(s) 39, 183, 342, 807
AluBI AGCT 5 cut(s) 430, 474, 508, 682, 743
AluI AGCT 5 cut(s) 430, 474, 508, 682, 743
Alw26I GTCTC 1 cut(s) 152
AlwI GGATC 2 cut(s) 273, 472
AlwNI CAGNNNCTG 1 cut(s) 433
Ama87I CYCGRG 1 cut(s) 350
AoxI GGCC 6 cut(s) 58, 90, 112, 443, 519, 820
ApeKI GCWGC 4 cut(s) 196, 583, 641, 704
AspLEI GCGC 9 cut(s) 50, 68, 74, 120, 122, 412, 460, 560, 583
AspS9I GGNCC 6 cut(s) 91, 187, 225, 367, 600, 811
AsuC2I CCSGG 1 cut(s) 308
AsuHPI GGTGA 2 cut(s) 25, 674
AvaI CYCGRG 1 cut(s) 350
AvaII GGWCC 5 cut(s) 187, 225, 367, 600, 811
AxyI CCTNAGG 1 cut(s) 798
BalI TGGCCA 1 cut(s) 521
BanI GGYRCC 4 cut(s) 65, 71, 173, 257
BanII GRGCYC 2 cut(s) 351, 658
BbrPI CACGTG 1 cut(s) 451
BbvI GCAGC 4 cut(s) 183, 595, 628, 691
BccI CCATC 4 cut(s) 86, 257, 268, 530
BceAI ACGGC 4 cut(s) 5, 107, 124, 545
BciT130I CCWGG 4 cut(s) 41, 185, 344, 809
BcnI CCSGG 1 cut(s) 308
BcoDI GTCTC 1 cut(s) 152
BfaI CTAG 1 cut(s) 744
BfmI CTRYAG 1 cut(s) 197
BfoI RGCGCY 3 cut(s) 69, 75, 461
BfuAI ACCTGC 2 cut(s) 565, 801
BglII AGATCT 1 cut(s) 330
BlpI GCTNAGC 1 cut(s) 678
Bme1390I CCNGG 5 cut(s) 41, 185, 308, 344, 809
Bme18I GGWCC 5 cut(s) 187, 225, 367, 600, 811
BmeT110I CYCGRG 1 cut(s) 350
BmgBI CACGTC 1 cut(s) 517
BmgT120I GGNCC 6 cut(s) 91, 187, 225, 367, 600, 811
BmiI GGNNCC 7 cut(s) 67, 73, 175, 189, 227, 259, 806
BmrFI CCNGG 5 cut(s) 41, 185, 308, 344, 809
Bpu10I CCTNAGC 2 cut(s) 489, 657
Bpu1102I GCTNAGC 1 cut(s) 678
BpuEI CTTGAG 1 cut(s) 380
BpuMI CCSGG 1 cut(s) 308
BsaAI YACGTR 1 cut(s) 451
BsaHI GRCGYC 3 cut(s) 66, 72, 147
BsaI GGTCTC 1 cut(s) 152
BsaJI CCNNGG 7 cut(s) 61, 142, 191, 261, 342, 343, 823
BsaXI ACNNNNNCTCC 2 cut(s) 227, 257
Bsc4I CCNNNNNNNGG 4 cut(s) 184, 310, 380, 799
Bse118I RCCGGY 1 cut(s) 68
Bse21I CCTNAGG 1 cut(s) 798
BseBI CCWGG 4 cut(s) 41, 185, 344, 809
BseDI CCNNGG 7 cut(s) 61, 142, 191, 261, 342, 343, 823
BseLI CCNNNNNNNGG 4 cut(s) 184, 310, 380, 799
BseMII CTCAG 3 cut(s) 281, 341, 671
BsePI GCGCGC 1 cut(s) 118
BseRI GAGGAG 2 cut(s) 235, 649
BseX3I CGGCCG 1 cut(s) 443
BseXI GCAGC 4 cut(s) 183, 595, 628, 691
Bsh1236I CGCG 4 cut(s) 48, 120, 144, 558
Bsh1285I CGRYCG 3 cut(s) 136, 381, 446
BshFI GGCC 6 cut(s) 60, 92, 114, 445, 521, 822
BshNI GGYRCC 4 cut(s) 65, 71, 173, 257
BsiEI CGRYCG 3 cut(s) 136, 381, 446
BsiHKCI CYCGRG 1 cut(s) 350
BsiSI CCGG 4 cut(s) 69, 255, 308, 708
BsiWI CGTACG 1 cut(s) 537
BslFI GGGAC 1 cut(s) 173
BslI CCNNNNNNNGG 4 cut(s) 184, 310, 380, 799
BsmAI GTCTC 1 cut(s) 152
BsmFI GGGAC 1 cut(s) 173
BsnI GGCC 6 cut(s) 60, 92, 114, 445, 521, 822
Bso31I GGTCTC 1 cut(s) 152
BsoBI CYCGRG 1 cut(s) 350
Bsp1286I GDGCHC 2 cut(s) 351, 658
Bsp1407I TGTACA 1 cut(s) 96
Bsp143I GATC 5 cut(s) 265, 330, 378, 424, 477
Bsp1720I GCTNAGC 1 cut(s) 678
BspANI GGCC 6 cut(s) 60, 92, 114, 445, 521, 822
BspCNI CTCAG 3 cut(s) 282, 340, 670
BspFNI CGCG 4 cut(s) 48, 120, 144, 558
BspLI GGNNCC 7 cut(s) 67, 73, 175, 189, 227, 259, 806
BspMAI CTGCAG 1 cut(s) 201
BspMI ACCTGC 2 cut(s) 565, 801
BspPI GGATC 2 cut(s) 273, 472
BspT107I GGYRCC 4 cut(s) 65, 71, 173, 257
BspTNI GGTCTC 1 cut(s) 152
BsrBI CCGCTC 2 cut(s) 442, 598
BsrFI RCCGGY 1 cut(s) 68
BsrGI TGTACA 1 cut(s) 96
BssAI RCCGGY 1 cut(s) 68
BssECI CCNNGG 7 cut(s) 61, 142, 191, 261, 342, 343, 823
BssHII GCGCGC 1 cut(s) 118
BssMI GATC 5 cut(s) 265, 330, 378, 424, 477
BssNI GRCGYC 3 cut(s) 66, 72, 147
BssT1I CCWWGG 1 cut(s) 261
Bst2UI CCWGG 4 cut(s) 41, 185, 344, 809
Bst4CI ACNGT 3 cut(s) 103, 137, 163
Bst6I CTCTTC 2 cut(s) 134, 821
BstACI GRCGYC 3 cut(s) 66, 72, 147
BstAUI TGTACA 1 cut(s) 96
BstBAI YACGTR 1 cut(s) 451
BstC8I GCNNGC 5 cut(s) 46, 70, 116, 120, 768
BstDEI CTNAG 6 cut(s) 290, 327, 489, 657, 678, 798
BstDSI CCRYGG 2 cut(s) 142, 191
BstENI CCTNNNNNAGG 1 cut(s) 797
BstFNI CGCG 4 cut(s) 48, 120, 144, 558
BstH2I RGCGCY 3 cut(s) 69, 75, 461
BstHHI GCGC 9 cut(s) 50, 68, 74, 120, 122, 412, 460, 560, 583
BstKTI GATC 5 cut(s) 268, 333, 381, 427, 480
BstMAI GTCTC 1 cut(s) 152
BstMBI GATC 5 cut(s) 265, 330, 378, 424, 477
BstMCI CGRYCG 3 cut(s) 136, 381, 446
BstMWI GCNNNNNNNGC 8 cut(s) 50, 117, 202, 407, 480, 580, 701, 767
BstNI CCWGG 4 cut(s) 41, 185, 344, 809
BstSCI CCNGG 5 cut(s) 39, 183, 306, 342, 807
BstSFI CTRYAG 1 cut(s) 197
BstUI CGCG 4 cut(s) 48, 120, 144, 558
BstV1I GCAGC 4 cut(s) 183, 595, 628, 691
BstX2I RGATCY 2 cut(s) 265, 330
BstYI RGATCY 2 cut(s) 265, 330
BstZI CGGCCG 1 cut(s) 443
Bsu36I CCTNAGG 1 cut(s) 798
BsuRI GGCC 6 cut(s) 60, 92, 114, 445, 521, 822
BtgI CCRYGG 2 cut(s) 142, 191
BtrI CACGTC 1 cut(s) 517
BveI ACCTGC 2 cut(s) 565, 801
Cac8I GCNNGC 5 cut(s) 46, 70, 116, 120, 768
CaiI CAGNNNCTG 1 cut(s) 433
CciNI GCGGCCGC 1 cut(s) 443
CfoI GCGC 9 cut(s) 50, 68, 74, 120, 122, 412, 460, 560, 583
Cfr10I RCCGGY 1 cut(s) 68
Cfr13I GGNCC 6 cut(s) 91, 187, 225, 367, 600, 811
Cfr42I CCGCGG 1 cut(s) 145
CseI GACGC 1 cut(s) 136
CsiI ACCWGGT 1 cut(s) 807
Csp6I GTAC 3 cut(s) 97, 355, 538
CviQI GTAC 3 cut(s) 97, 355, 538
DdeI CTNAG 6 cut(s) 290, 327, 489, 657, 678, 798
DinI GGCGCC 2 cut(s) 67, 73
DpnI GATC 5 cut(s) 267, 332, 380, 426, 479
DpnII GATC 5 cut(s) 265, 330, 378, 424, 477
DrdI GACNNNNNNGTC 2 cut(s) 161, 365
DseDI GACNNNNNNGTC 2 cut(s) 161, 365
EaeI YGGCCR 3 cut(s) 112, 443, 519
EagI CGGCCG 1 cut(s) 443
Eam1104I CTCTTC 2 cut(s) 134, 821
EarI CTCTTC 2 cut(s) 134, 821
EciI GGCGGA 3 cut(s) 560, 608, 638
EclXI CGGCCG 1 cut(s) 443
Eco130I CCWWGG 1 cut(s) 261
Eco24I GRGCYC 2 cut(s) 351, 658
Eco31I GGTCTC 1 cut(s) 152
Eco47I GGWCC 5 cut(s) 187, 225, 367, 600, 811
Eco52I CGGCCG 1 cut(s) 443
Eco57I CTGAAG 1 cut(s) 254
Eco72I CACGTG 1 cut(s) 451
Eco81I CCTNAGG 1 cut(s) 798
Eco88I CYCGRG 1 cut(s) 350
EcoNI CCTNNNNNAGG 1 cut(s) 797
EcoO109I RGGNCCY 3 cut(s) 225, 367, 811
EcoRII CCWGG 4 cut(s) 39, 183, 342, 807
EcoT14I CCWWGG 1 cut(s) 261
EcoT38I GRGCYC 2 cut(s) 351, 658
EgeI GGCGCC 2 cut(s) 67, 73
EheI GGCGCC 2 cut(s) 67, 73
ErhI CCWWGG 1 cut(s) 261
FaqI GGGAC 1 cut(s) 173
FauI CCCGC 3 cut(s) 236, 311, 459
FblI GTMKAC 1 cut(s) 105
FriOI GRGCYC 2 cut(s) 351, 658
FspBI CTAG 1 cut(s) 744
GlaI GCGC 9 cut(s) 49, 67, 73, 119, 121, 411, 459, 559, 582
HaeII RGCGCY 3 cut(s) 69, 75, 461
HaeIII GGCC 6 cut(s) 60, 92, 114, 445, 521, 822
HapII CCGG 4 cut(s) 69, 255, 308, 708
HgaI GACGC 1 cut(s) 136
HhaI GCGC 9 cut(s) 50, 68, 74, 120, 122, 412, 460, 560, 583
Hin1I GRCGYC 3 cut(s) 66, 72, 147
Hin6I GCGC 9 cut(s) 48, 66, 72, 118, 120, 410, 458, 558, 581
HinP1I GCGC 9 cut(s) 48, 66, 72, 118, 120, 410, 458, 558, 581
HincII GTYRAC 4 cut(s) 85, 106, 280, 787
HindII GTYRAC 4 cut(s) 85, 106, 280, 787
HinfI GANTC 1 cut(s) 671
HpaII CCGG 4 cut(s) 69, 255, 308, 708
HphI GGTGA 2 cut(s) 25, 674
Hpy166II GTNNAC 5 cut(s) 85, 99, 106, 280, 787
Hpy188I TCNGA 5 cut(s) 273, 291, 330, 691, 731
Hpy188III TCNNGA 3 cut(s) 223, 382, 433
Hpy8I GTNNAC 5 cut(s) 85, 99, 106, 280, 787
Hpy99I CGWCG 8 cut(s) 107, 110, 158, 167, 362, 379, 518, 566
HpyAV CCTTC 7 cut(s) 37, 64, 164, 250, 358, 613, 726
HpyCH4III ACNGT 3 cut(s) 103, 137, 163
HpyCH4IV ACGT 2 cut(s) 450, 516
HpyCH4V TGCA 1 cut(s) 199
HpyF10VI GCNNNNNNNGC 8 cut(s) 50, 117, 202, 407, 480, 580, 701, 767
HpyF3I CTNAG 6 cut(s) 290, 327, 489, 657, 678, 798
HpySE526I ACGT 2 cut(s) 450, 516
Hsp92I GRCGYC 3 cut(s) 66, 72, 147
HspAI GCGC 9 cut(s) 48, 66, 72, 118, 120, 410, 458, 558, 581
KasI GGCGCC 2 cut(s) 65, 71
KroI GCCGGC 1 cut(s) 68
KroNI GCCGGC 1 cut(s) 70
KspI CCGCGG 1 cut(s) 145
Kzo9I GATC 5 cut(s) 265, 330, 378, 424, 477
LmnI GCTCC 4 cut(s) 435, 439, 595, 625
Lsp1109I GCAGC 4 cut(s) 183, 595, 628, 691
MabI ACCWGGT 1 cut(s) 807
MaeI CTAG 1 cut(s) 744
MaeII ACGT 2 cut(s) 450, 516
MaeIII GTNAC 1 cut(s) 713
MalI GATC 5 cut(s) 267, 332, 380, 426, 479
MbiI CCGCTC 2 cut(s) 442, 598
MboI GATC 5 cut(s) 265, 330, 378, 424, 477
MboII GAAGA 5 cut(s) 121, 205, 260, 325, 808
MflI RGATCY 2 cut(s) 265, 330
MhlI GDGCHC 2 cut(s) 351, 658
MlsI TGGCCA 1 cut(s) 521
MluNI TGGCCA 1 cut(s) 521
Mly113I GGCGCC 2 cut(s) 66, 72
Mox20I TGGCCA 1 cut(s) 521
MreI CGCCGGCG 1 cut(s) 68
MroNI GCCGGC 1 cut(s) 68
MscI TGGCCA 1 cut(s) 521
Msp20I TGGCCA 1 cut(s) 521
MspA1I CMGCKG 2 cut(s) 144, 704
MspI CCGG 4 cut(s) 69, 255, 308, 708
MspR9I CCNGG 5 cut(s) 41, 185, 308, 344, 809
MvaI CCWGG 4 cut(s) 41, 185, 344, 809
MvnI CGCG 4 cut(s) 48, 120, 144, 558
MwoI GCNNNNNNNGC 8 cut(s) 50, 117, 202, 407, 480, 580, 701, 767
NaeI GCCGGC 1 cut(s) 70
NarI GGCGCC 2 cut(s) 66, 72
NciI CCSGG 1 cut(s) 308
NdeII GATC 5 cut(s) 265, 330, 378, 424, 477
NgoMIV GCCGGC 1 cut(s) 68
NlaIV GGNNCC 7 cut(s) 67, 73, 175, 189, 227, 259, 806
NmeAIII GCCGAG 2 cut(s) 42, 68
NmuCI GTSAC 1 cut(s) 713
NotI GCGGCCGC 1 cut(s) 443
PaeR7I CTCGAG 1 cut(s) 350
PaqCI CACCTGC 1 cut(s) 565
PasI CCCWGGG 1 cut(s) 343
PauI GCGCGC 1 cut(s) 118
PcsI WCGNNNNNNNCGW 3 cut(s) 159, 357, 533
PdiI GCCGGC 1 cut(s) 70
PfeI GAWTC 1 cut(s) 671
Pfl23II CGTACG 1 cut(s) 537
PflMI CCANNNNNTGG 1 cut(s) 184
Ple19I CGATCG 1 cut(s) 381
PluTI GGCGCC 2 cut(s) 69, 75
PmaCI CACGTG 1 cut(s) 451
PmlI CACGTG 1 cut(s) 451
Ppu21I YACGTR 1 cut(s) 451
PpuMI RGGWCCY 3 cut(s) 225, 367, 811
Psp5II RGGWCCY 3 cut(s) 225, 367, 811
Psp6I CCWGG 4 cut(s) 39, 183, 342, 807
PspCI CACGTG 1 cut(s) 451
PspGI CCWGG 4 cut(s) 39, 183, 342, 807
PspLI CGTACG 1 cut(s) 537
PspN4I GGNNCC 7 cut(s) 67, 73, 175, 189, 227, 259, 806
PspPI GGNCC 6 cut(s) 91, 187, 225, 367, 600, 811
PspPPI RGGWCCY 3 cut(s) 225, 367, 811
PspXI VCTCGAGB 1 cut(s) 350
PstI CTGCAG 1 cut(s) 201
PstNI CAGNNNCTG 1 cut(s) 433
PsuI RGATCY 2 cut(s) 265, 330
PteI GCGCGC 1 cut(s) 118
PvuI CGATCG 1 cut(s) 381
RsaI GTAC 3 cut(s) 98, 356, 539
RsaNI GTAC 3 cut(s) 97, 355, 538
SacII CCGCGG 1 cut(s) 145
SalI GTCGAC 1 cut(s) 104
Sau3AI GATC 5 cut(s) 265, 330, 378, 424, 477
Sau96I GGNCC 6 cut(s) 91, 187, 225, 367, 600, 811
ScrFI CCNGG 5 cut(s) 41, 185, 308, 344, 809
SduI GDGCHC 2 cut(s) 351, 658
SexAI ACCWGGT 1 cut(s) 807
SfcI CTRYAG 1 cut(s) 197
SfoI GGCGCC 2 cut(s) 67, 73
Sfr274I CTCGAG 1 cut(s) 350
Sfr303I CCGCGG 1 cut(s) 145
SgrAI CRCCGGYG 1 cut(s) 68
SgrBI CCGCGG 1 cut(s) 145
SgrDI CGTCGACG 1 cut(s) 104
SinI GGWCC 5 cut(s) 187, 225, 367, 600, 811
SlaI CTCGAG 1 cut(s) 350
SmlI CTYRAG 2 cut(s) 350, 395
SmoI CTYRAG 2 cut(s) 350, 395
SspDI GGCGCC 2 cut(s) 65, 71
SspMI CTAG 1 cut(s) 744
StyD4I CCNGG 5 cut(s) 39, 183, 306, 342, 807
StyI CCWWGG 1 cut(s) 261
TaaI ACNGT 3 cut(s) 103, 137, 163
TaiI ACGT 2 cut(s) 453, 519
TaqI TCGA 7 cut(s) 105, 132, 153, 216, 351, 377, 564
TatI WGTACW 1 cut(s) 96
TauI GCSGC 8 cut(s) 20, 53, 114, 147, 445, 448, 704, 761
TfiI GAWTC 1 cut(s) 671
TseFI GTSAC 1 cut(s) 713
TseI GCWGC 4 cut(s) 196, 583, 641, 704
Tsp45I GTSAC 1 cut(s) 713
TspGWI ACGGA 1 cut(s) 452
Van91I CCANNNNNTGG 1 cut(s) 184
VpaK11BI GGWCC 5 cut(s) 187, 225, 367, 600, 811
XagI CCTNNNNNAGG 1 cut(s) 797
XcmI CCANNNNNNNNNTGG 1 cut(s) 610
XhoI CTCGAG 1 cut(s) 350
XmiI GTMKAC 1 cut(s) 105
XspI CTAG 1 cut(s) 744
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.