Prohibitin-3
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G27280 AT3G27280 AT5G40770 |
| fragaria_vesca | FvH4_6g52780 |
| malus_domestica | MD09G1016800.v1.1 MD17G1017200.v1.1 |
| prunus_persica | Prupe.3G300700_v2.0.a1 Prupe.3G300700_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0174411 |
| rosa_laevigata | RLG00000022263 |
| rosa_multiflora | Rmu_co8273923.1_g000001 Rmu_sc0003649.1_g000029 |
| rosa_roxburghii | Rroxscaffold_2G00078240 |
| rosa_rugosa | Rorug02G0576500 |
| rosa_samantha | Rh2AG657700 Rh2BG668800 Rh2CG631700 Rh2DG682300 |
| rosa_wichuraiana | Rw2G053870 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 472 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 68, 272 |
| Acc36I | ACCTGC | 2 cut(s) | 472, 708 |
| AccB1I | GGYRCC | 2 cut(s) | 80, 164 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 91 |
| AccBSI | CCGCTC | 2 cut(s) | 349, 505 |
| AccI | GTMKAC | 1 cut(s) | 12 |
| AccII | CGCG | 3 cut(s) | 27, 51, 465 |
| AclWI | GGATC | 2 cut(s) | 180, 379 |
| AcoI | YGGCCR | 3 cut(s) | 19, 350, 426 |
| AcuI | CTGAAG | 1 cut(s) | 161 |
| AcvI | CACGTG | 1 cut(s) | 358 |
| AcyI | GRCGYC | 1 cut(s) | 54 |
| AfaI | GTAC | 3 cut(s) | 5, 263, 446 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 91, 217, 287, 706 |
| AflIII | ACRYGT | 1 cut(s) | 357 |
| AgsI | TTSAA | 5 cut(s) | 244, 325, 406, 632, 647 |
| AjiI | CACGTC | 1 cut(s) | 424 |
| AjnI | CCWGG | 3 cut(s) | 90, 249, 714 |
| AluBI | AGCT | 5 cut(s) | 337, 381, 415, 589, 650 |
| AluI | AGCT | 5 cut(s) | 337, 381, 415, 589, 650 |
| Alw26I | GTCTC | 1 cut(s) | 59 |
| AlwI | GGATC | 2 cut(s) | 180, 379 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 340 |
| Ama87I | CYCGRG | 1 cut(s) | 257 |
| AoxI | GGCC | 4 cut(s) | 19, 350, 426, 727 |
| ApeKI | GCWGC | 4 cut(s) | 103, 490, 548, 611 |
| AspLEI | GCGC | 6 cut(s) | 27, 29, 319, 367, 467, 490 |
| AspS9I | GGNCC | 5 cut(s) | 94, 132, 274, 507, 718 |
| AsuC2I | CCSGG | 1 cut(s) | 215 |
| AsuHPI | GGTGA | 1 cut(s) | 581 |
| AvaI | CYCGRG | 1 cut(s) | 257 |
| AvaII | GGWCC | 5 cut(s) | 94, 132, 274, 507, 718 |
| AxyI | CCTNAGG | 1 cut(s) | 705 |
| BalI | TGGCCA | 1 cut(s) | 428 |
| BanI | GGYRCC | 2 cut(s) | 80, 164 |
| BanII | GRGCYC | 2 cut(s) | 258, 565 |
| BbrPI | CACGTG | 1 cut(s) | 358 |
| BbvI | GCAGC | 4 cut(s) | 90, 502, 535, 598 |
| BccI | CCATC | 3 cut(s) | 164, 175, 437 |
| BceAI | ACGGC | 3 cut(s) | 14, 31, 452 |
| BciT130I | CCWGG | 3 cut(s) | 92, 251, 716 |
| BcnI | CCSGG | 1 cut(s) | 215 |
| BcoDI | GTCTC | 1 cut(s) | 59 |
| BfaI | CTAG | 1 cut(s) | 651 |
| BfmI | CTRYAG | 1 cut(s) | 104 |
| BfoI | RGCGCY | 1 cut(s) | 368 |
| BfuAI | ACCTGC | 2 cut(s) | 472, 708 |
| BglII | AGATCT | 1 cut(s) | 237 |
| BlpI | GCTNAGC | 1 cut(s) | 585 |
| Bme1390I | CCNGG | 4 cut(s) | 92, 215, 251, 716 |
| Bme18I | GGWCC | 5 cut(s) | 94, 132, 274, 507, 718 |
| BmeT110I | CYCGRG | 1 cut(s) | 257 |
| BmgBI | CACGTC | 1 cut(s) | 424 |
| BmgT120I | GGNCC | 5 cut(s) | 94, 132, 274, 507, 718 |
| BmiI | GGNNCC | 5 cut(s) | 82, 96, 134, 166, 713 |
| BmrFI | CCNGG | 4 cut(s) | 92, 215, 251, 716 |
| Bpu10I | CCTNAGC | 2 cut(s) | 396, 564 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 585 |
| BpuEI | CTTGAG | 1 cut(s) | 287 |
| BpuMI | CCSGG | 1 cut(s) | 215 |
| BsaAI | YACGTR | 1 cut(s) | 358 |
| BsaHI | GRCGYC | 1 cut(s) | 54 |
| BsaI | GGTCTC | 1 cut(s) | 59 |
| BsaJI | CCNNGG | 6 cut(s) | 49, 98, 168, 249, 250, 730 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 134, 164 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 91, 217, 287, 706 |
| Bse21I | CCTNAGG | 1 cut(s) | 705 |
| BseBI | CCWGG | 3 cut(s) | 92, 251, 716 |
| BseDI | CCNNGG | 6 cut(s) | 49, 98, 168, 249, 250, 730 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 91, 217, 287, 706 |
| BseMII | CTCAG | 3 cut(s) | 188, 248, 578 |
| BsePI | GCGCGC | 1 cut(s) | 25 |
| BseRI | GAGGAG | 2 cut(s) | 142, 556 |
| BseX3I | CGGCCG | 1 cut(s) | 350 |
| BseXI | GCAGC | 4 cut(s) | 90, 502, 535, 598 |
| Bsh1236I | CGCG | 3 cut(s) | 27, 51, 465 |
| Bsh1285I | CGRYCG | 3 cut(s) | 43, 288, 353 |
| BshFI | GGCC | 4 cut(s) | 21, 352, 428, 729 |
| BshNI | GGYRCC | 2 cut(s) | 80, 164 |
| BsiEI | CGRYCG | 3 cut(s) | 43, 288, 353 |
| BsiHKCI | CYCGRG | 1 cut(s) | 257 |
| BsiSI | CCGG | 3 cut(s) | 162, 215, 615 |
| BsiWI | CGTACG | 1 cut(s) | 444 |
| BslFI | GGGAC | 1 cut(s) | 80 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 91, 217, 287, 706 |
| BsmAI | GTCTC | 1 cut(s) | 59 |
| BsmFI | GGGAC | 1 cut(s) | 80 |
| BsnI | GGCC | 4 cut(s) | 21, 352, 428, 729 |
| Bso31I | GGTCTC | 1 cut(s) | 59 |
| BsoBI | CYCGRG | 1 cut(s) | 257 |
| Bsp1286I | GDGCHC | 2 cut(s) | 258, 565 |
| Bsp1407I | TGTACA | 1 cut(s) | 3 |
| Bsp143I | GATC | 5 cut(s) | 172, 237, 285, 331, 384 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 585 |
| BspANI | GGCC | 4 cut(s) | 21, 352, 428, 729 |
| BspCNI | CTCAG | 3 cut(s) | 189, 247, 577 |
| BspFNI | CGCG | 3 cut(s) | 27, 51, 465 |
| BspLI | GGNNCC | 5 cut(s) | 82, 96, 134, 166, 713 |
| BspMAI | CTGCAG | 1 cut(s) | 108 |
| BspMI | ACCTGC | 2 cut(s) | 472, 708 |
| BspPI | GGATC | 2 cut(s) | 180, 379 |
| BspT107I | GGYRCC | 2 cut(s) | 80, 164 |
| BspTNI | GGTCTC | 1 cut(s) | 59 |
| BsrBI | CCGCTC | 2 cut(s) | 349, 505 |
| BsrGI | TGTACA | 1 cut(s) | 3 |
| BssECI | CCNNGG | 6 cut(s) | 49, 98, 168, 249, 250, 730 |
| BssHII | GCGCGC | 1 cut(s) | 25 |
| BssMI | GATC | 5 cut(s) | 172, 237, 285, 331, 384 |
| BssNI | GRCGYC | 1 cut(s) | 54 |
| BssT1I | CCWWGG | 1 cut(s) | 168 |
| Bst2UI | CCWGG | 3 cut(s) | 92, 251, 716 |
| Bst4CI | ACNGT | 3 cut(s) | 10, 44, 70 |
| Bst6I | CTCTTC | 2 cut(s) | 41, 728 |
| BstACI | GRCGYC | 1 cut(s) | 54 |
| BstAUI | TGTACA | 1 cut(s) | 3 |
| BstBAI | YACGTR | 1 cut(s) | 358 |
| BstC8I | GCNNGC | 3 cut(s) | 23, 27, 675 |
| BstDEI | CTNAG | 6 cut(s) | 197, 234, 396, 564, 585, 705 |
| BstDSI | CCRYGG | 2 cut(s) | 49, 98 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 704 |
| BstFNI | CGCG | 3 cut(s) | 27, 51, 465 |
| BstH2I | RGCGCY | 1 cut(s) | 368 |
| BstHHI | GCGC | 6 cut(s) | 27, 29, 319, 367, 467, 490 |
| BstKTI | GATC | 5 cut(s) | 175, 240, 288, 334, 387 |
| BstMAI | GTCTC | 1 cut(s) | 59 |
| BstMBI | GATC | 5 cut(s) | 172, 237, 285, 331, 384 |
| BstMCI | CGRYCG | 3 cut(s) | 43, 288, 353 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 24, 109, 314, 387, 487, 608, 674 |
| BstNI | CCWGG | 3 cut(s) | 92, 251, 716 |
| BstSCI | CCNGG | 4 cut(s) | 90, 213, 249, 714 |
| BstSFI | CTRYAG | 1 cut(s) | 104 |
| BstUI | CGCG | 3 cut(s) | 27, 51, 465 |
| BstV1I | GCAGC | 4 cut(s) | 90, 502, 535, 598 |
| BstX2I | RGATCY | 2 cut(s) | 172, 237 |
| BstYI | RGATCY | 2 cut(s) | 172, 237 |
| BstZI | CGGCCG | 1 cut(s) | 350 |
| Bsu36I | CCTNAGG | 1 cut(s) | 705 |
| BsuRI | GGCC | 4 cut(s) | 21, 352, 428, 729 |
| BtgI | CCRYGG | 2 cut(s) | 49, 98 |
| BtrI | CACGTC | 1 cut(s) | 424 |
| BveI | ACCTGC | 2 cut(s) | 472, 708 |
| Cac8I | GCNNGC | 3 cut(s) | 23, 27, 675 |
| CaiI | CAGNNNCTG | 1 cut(s) | 340 |
| CciNI | GCGGCCGC | 1 cut(s) | 350 |
| CfoI | GCGC | 6 cut(s) | 27, 29, 319, 367, 467, 490 |
| Cfr13I | GGNCC | 5 cut(s) | 94, 132, 274, 507, 718 |
| Cfr42I | CCGCGG | 1 cut(s) | 52 |
| CseI | GACGC | 1 cut(s) | 43 |
| CsiI | ACCWGGT | 1 cut(s) | 714 |
| Csp6I | GTAC | 3 cut(s) | 4, 262, 445 |
| CviQI | GTAC | 3 cut(s) | 4, 262, 445 |
| DdeI | CTNAG | 6 cut(s) | 197, 234, 396, 564, 585, 705 |
| DpnI | GATC | 5 cut(s) | 174, 239, 287, 333, 386 |
| DpnII | GATC | 5 cut(s) | 172, 237, 285, 331, 384 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 68, 272 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 68, 272 |
| EaeI | YGGCCR | 3 cut(s) | 19, 350, 426 |
| EagI | CGGCCG | 1 cut(s) | 350 |
| Eam1104I | CTCTTC | 2 cut(s) | 41, 728 |
| EarI | CTCTTC | 2 cut(s) | 41, 728 |
| EciI | GGCGGA | 3 cut(s) | 467, 515, 545 |
| EclXI | CGGCCG | 1 cut(s) | 350 |
| Eco130I | CCWWGG | 1 cut(s) | 168 |
| Eco24I | GRGCYC | 2 cut(s) | 258, 565 |
| Eco31I | GGTCTC | 1 cut(s) | 59 |
| Eco47I | GGWCC | 5 cut(s) | 94, 132, 274, 507, 718 |
| Eco52I | CGGCCG | 1 cut(s) | 350 |
| Eco57I | CTGAAG | 1 cut(s) | 161 |
| Eco72I | CACGTG | 1 cut(s) | 358 |
| Eco81I | CCTNAGG | 1 cut(s) | 705 |
| Eco88I | CYCGRG | 1 cut(s) | 257 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 704 |
| EcoO109I | RGGNCCY | 3 cut(s) | 132, 274, 718 |
| EcoRII | CCWGG | 3 cut(s) | 90, 249, 714 |
| EcoT14I | CCWWGG | 1 cut(s) | 168 |
| EcoT38I | GRGCYC | 2 cut(s) | 258, 565 |
| ErhI | CCWWGG | 1 cut(s) | 168 |
| FaqI | GGGAC | 1 cut(s) | 80 |
| FauI | CCCGC | 3 cut(s) | 143, 218, 366 |
| FblI | GTMKAC | 1 cut(s) | 12 |
| FriOI | GRGCYC | 2 cut(s) | 258, 565 |
| FspBI | CTAG | 1 cut(s) | 651 |
| GlaI | GCGC | 6 cut(s) | 26, 28, 318, 366, 466, 489 |
| HaeII | RGCGCY | 1 cut(s) | 368 |
| HaeIII | GGCC | 4 cut(s) | 21, 352, 428, 729 |
| HapII | CCGG | 3 cut(s) | 162, 215, 615 |
| HgaI | GACGC | 1 cut(s) | 43 |
| HhaI | GCGC | 6 cut(s) | 27, 29, 319, 367, 467, 490 |
| Hin1I | GRCGYC | 1 cut(s) | 54 |
| Hin6I | GCGC | 6 cut(s) | 25, 27, 317, 365, 465, 488 |
| HinP1I | GCGC | 6 cut(s) | 25, 27, 317, 365, 465, 488 |
| HincII | GTYRAC | 3 cut(s) | 13, 187, 694 |
| HindII | GTYRAC | 3 cut(s) | 13, 187, 694 |
| HinfI | GANTC | 1 cut(s) | 578 |
| HpaII | CCGG | 3 cut(s) | 162, 215, 615 |
| HphI | GGTGA | 1 cut(s) | 581 |
| Hpy166II | GTNNAC | 4 cut(s) | 6, 13, 187, 694 |
| Hpy188I | TCNGA | 5 cut(s) | 180, 198, 237, 598, 638 |
| Hpy188III | TCNNGA | 3 cut(s) | 130, 289, 340 |
| Hpy8I | GTNNAC | 4 cut(s) | 6, 13, 187, 694 |
| Hpy99I | CGWCG | 8 cut(s) | 14, 17, 65, 74, 269, 286, 425, 473 |
| HpyAV | CCTTC | 5 cut(s) | 71, 157, 265, 520, 633 |
| HpyCH4III | ACNGT | 3 cut(s) | 10, 44, 70 |
| HpyCH4IV | ACGT | 2 cut(s) | 357, 423 |
| HpyCH4V | TGCA | 1 cut(s) | 106 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 24, 109, 314, 387, 487, 608, 674 |
| HpyF3I | CTNAG | 6 cut(s) | 197, 234, 396, 564, 585, 705 |
| HpySE526I | ACGT | 2 cut(s) | 357, 423 |
| Hsp92I | GRCGYC | 1 cut(s) | 54 |
| HspAI | GCGC | 6 cut(s) | 25, 27, 317, 365, 465, 488 |
| KspI | CCGCGG | 1 cut(s) | 52 |
| Kzo9I | GATC | 5 cut(s) | 172, 237, 285, 331, 384 |
| LmnI | GCTCC | 4 cut(s) | 342, 346, 502, 532 |
| Lsp1109I | GCAGC | 4 cut(s) | 90, 502, 535, 598 |
| MabI | ACCWGGT | 1 cut(s) | 714 |
| MaeI | CTAG | 1 cut(s) | 651 |
| MaeII | ACGT | 2 cut(s) | 357, 423 |
| MaeIII | GTNAC | 1 cut(s) | 620 |
| MalI | GATC | 5 cut(s) | 174, 239, 287, 333, 386 |
| MbiI | CCGCTC | 2 cut(s) | 349, 505 |
| MboI | GATC | 5 cut(s) | 172, 237, 285, 331, 384 |
| MboII | GAAGA | 5 cut(s) | 28, 112, 167, 232, 715 |
| MflI | RGATCY | 2 cut(s) | 172, 237 |
| MhlI | GDGCHC | 2 cut(s) | 258, 565 |
| MlsI | TGGCCA | 1 cut(s) | 428 |
| MluNI | TGGCCA | 1 cut(s) | 428 |
| Mox20I | TGGCCA | 1 cut(s) | 428 |
| MscI | TGGCCA | 1 cut(s) | 428 |
| Msp20I | TGGCCA | 1 cut(s) | 428 |
| MspA1I | CMGCKG | 2 cut(s) | 51, 611 |
| MspI | CCGG | 3 cut(s) | 162, 215, 615 |
| MspR9I | CCNGG | 4 cut(s) | 92, 215, 251, 716 |
| MvaI | CCWGG | 3 cut(s) | 92, 251, 716 |
| MvnI | CGCG | 3 cut(s) | 27, 51, 465 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 24, 109, 314, 387, 487, 608, 674 |
| NciI | CCSGG | 1 cut(s) | 215 |
| NdeII | GATC | 5 cut(s) | 172, 237, 285, 331, 384 |
| NlaIV | GGNNCC | 5 cut(s) | 82, 96, 134, 166, 713 |
| NmuCI | GTSAC | 1 cut(s) | 620 |
| NotI | GCGGCCGC | 1 cut(s) | 350 |
| PaeR7I | CTCGAG | 1 cut(s) | 257 |
| PaqCI | CACCTGC | 1 cut(s) | 472 |
| PasI | CCCWGGG | 1 cut(s) | 250 |
| PauI | GCGCGC | 1 cut(s) | 25 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 66, 264, 440 |
| PfeI | GAWTC | 1 cut(s) | 578 |
| Pfl23II | CGTACG | 1 cut(s) | 444 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 91 |
| Ple19I | CGATCG | 1 cut(s) | 288 |
| PmaCI | CACGTG | 1 cut(s) | 358 |
| PmlI | CACGTG | 1 cut(s) | 358 |
| Ppu21I | YACGTR | 1 cut(s) | 358 |
| PpuMI | RGGWCCY | 3 cut(s) | 132, 274, 718 |
| Psp5II | RGGWCCY | 3 cut(s) | 132, 274, 718 |
| Psp6I | CCWGG | 3 cut(s) | 90, 249, 714 |
| PspCI | CACGTG | 1 cut(s) | 358 |
| PspGI | CCWGG | 3 cut(s) | 90, 249, 714 |
| PspLI | CGTACG | 1 cut(s) | 444 |
| PspN4I | GGNNCC | 5 cut(s) | 82, 96, 134, 166, 713 |
| PspPI | GGNCC | 5 cut(s) | 94, 132, 274, 507, 718 |
| PspPPI | RGGWCCY | 3 cut(s) | 132, 274, 718 |
| PspXI | VCTCGAGB | 1 cut(s) | 257 |
| PstI | CTGCAG | 1 cut(s) | 108 |
| PstNI | CAGNNNCTG | 1 cut(s) | 340 |
| PsuI | RGATCY | 2 cut(s) | 172, 237 |
| PteI | GCGCGC | 1 cut(s) | 25 |
| PvuI | CGATCG | 1 cut(s) | 288 |
| RsaI | GTAC | 3 cut(s) | 5, 263, 446 |
| RsaNI | GTAC | 3 cut(s) | 4, 262, 445 |
| SacII | CCGCGG | 1 cut(s) | 52 |
| SalI | GTCGAC | 1 cut(s) | 11 |
| Sau3AI | GATC | 5 cut(s) | 172, 237, 285, 331, 384 |
| Sau96I | GGNCC | 5 cut(s) | 94, 132, 274, 507, 718 |
| ScrFI | CCNGG | 4 cut(s) | 92, 215, 251, 716 |
| SduI | GDGCHC | 2 cut(s) | 258, 565 |
| SexAI | ACCWGGT | 1 cut(s) | 714 |
| SfcI | CTRYAG | 1 cut(s) | 104 |
| Sfr274I | CTCGAG | 1 cut(s) | 257 |
| Sfr303I | CCGCGG | 1 cut(s) | 52 |
| SgrBI | CCGCGG | 1 cut(s) | 52 |
| SgrDI | CGTCGACG | 1 cut(s) | 11 |
| SinI | GGWCC | 5 cut(s) | 94, 132, 274, 507, 718 |
| SlaI | CTCGAG | 1 cut(s) | 257 |
| SmlI | CTYRAG | 2 cut(s) | 257, 302 |
| SmoI | CTYRAG | 2 cut(s) | 257, 302 |
| SspMI | CTAG | 1 cut(s) | 651 |
| StyD4I | CCNGG | 4 cut(s) | 90, 213, 249, 714 |
| StyI | CCWWGG | 1 cut(s) | 168 |
| TaaI | ACNGT | 3 cut(s) | 10, 44, 70 |
| TaiI | ACGT | 2 cut(s) | 360, 426 |
| TaqI | TCGA | 7 cut(s) | 12, 39, 60, 123, 258, 284, 471 |
| TatI | WGTACW | 1 cut(s) | 3 |
| TauI | GCSGC | 6 cut(s) | 21, 54, 352, 355, 611, 668 |
| TfiI | GAWTC | 1 cut(s) | 578 |
| TseFI | GTSAC | 1 cut(s) | 620 |
| TseI | GCWGC | 4 cut(s) | 103, 490, 548, 611 |
| Tsp45I | GTSAC | 1 cut(s) | 620 |
| TspGWI | ACGGA | 1 cut(s) | 359 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 91 |
| VpaK11BI | GGWCC | 5 cut(s) | 94, 132, 274, 507, 718 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 704 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 517 |
| XhoI | CTCGAG | 1 cut(s) | 257 |
| XmiI | GTMKAC | 1 cut(s) | 12 |
| XspI | CTAG | 1 cut(s) | 651 |