Prupe.3G309900_v2.0.a1

Pollen proteins Ole e I like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0015014
Physical Location & Seq
Forward (+)
26945195 .. 26945846
652 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G309900.1

Sequence Viewer

Length: 528 bp
ATGAATCCACTATTTCTCTTGGTTATTTCATCTTTGTTTTTCCAGTCAGTATATTTGGGAGTTGAAGCAGCAAAAGCTAAACCAGTAAAAGGTACCACCCGGTCCCAGATTATTGTAATGGGTCTTGTTTATTGTGACATCTGCTCCAACAACACCTTCTCCAGACACAGCTACTTCATACCAGGTGCTGAAGTTAAAATAGATTGCATATTCCAAGCAGTCTCACCAAGAACCTCAGAACATATATCATTCTCAGTGAACAGAACTACGAACAAATATGGGGTCTACAAGTTGGAAATCCCAGCTGTTGAGGGGATCAAGTGTGCACAAGATTCAGCAATAGTGTCTTCCTGCCAGGCAACCTTAATGTGGAGTTCATCTTCAGTATGCAATGTTCCTGGTTACAAATCCACATCAGATGAAATAACAGTCAAGTCAAAACAAGCCAATCTCTGCATCTACAGCCTAAACGCATTGAATTTCAGACCATCAAAGAGAGAGATCACCTTATGTGGGAAGAAAAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pollen_Ole_e_I

Protein Analysis

176

Amino Acids

19.26

Weight (kDa)

9.13

Isoelectric Point (pI)

37.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015014)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G26960 AT5G41050
fragaria_vesca FvH4_6g53930
malus_domestica MD17G1011000.v1.1
prunus_persica Prupe.3G309900_v2.0.a1
pyrus_communis pycom17g00570
rosa_chinensis RchiOBHm_Chr2g0176091
rosa_laevigata RLG00000022380
rosa_multiflora Rmu_sc0009879.1_g000002
rosa_roxburghii Rroxscaffold_2G00076780
rosa_rugosa Rorug02G0590400
rosa_samantha Rh2AG669200 Rh2BG680800 Rh2CG643700 Rh2DG694500
rosa_wichuraiana Rw2G054890

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 92
AccB1I GGYRCC 1 cut(s) 92
AccI GTMKAC 1 cut(s) 285
AclWI GGATC 1 cut(s) 323
AcsI RAATTY 1 cut(s) 478
AcuI CTGAAG 2 cut(s) 210, 366
AfaI GTAC 1 cut(s) 94
AfiI CCNNNNNNNGG 3 cut(s) 89, 369, 513
AgsI TTSAA 2 cut(s) 65, 478
AjnI CCWGG 3 cut(s) 181, 354, 397
AjuI GAANNNNNNNTTGG 2 cut(s) 140, 172
AluBI AGCT 3 cut(s) 77, 171, 305
AluI AGCT 3 cut(s) 77, 171, 305
Alw21I GWGCWC 1 cut(s) 328
Alw26I GTCTC 1 cut(s) 226
Alw44I GTGCAC 1 cut(s) 324
AlwI GGATC 1 cut(s) 323
AlwNI CAGNNNCTG 1 cut(s) 188
ApaLI GTGCAC 1 cut(s) 324
ApeKI GCWGC 1 cut(s) 68
ApoI RAATTY 1 cut(s) 478
ArsI GACNNNNNNTTYG 2 cut(s) 267, 299
Asp718I GGTACC 1 cut(s) 92
AspS9I GGNCC 1 cut(s) 102
AsuC2I CCSGG 1 cut(s) 100
AsuHPI GGTGA 2 cut(s) 216, 496
AvaII GGWCC 1 cut(s) 102
BaeGI GKGCMC 1 cut(s) 328
BanI GGYRCC 1 cut(s) 92
BbsI GAAGAC 1 cut(s) 339
Bbv12I GWGCWC 1 cut(s) 328
BbvI GCAGC 1 cut(s) 80
BccI CCATC 1 cut(s) 496
BciT130I CCWGG 3 cut(s) 183, 356, 399
BcnI CCSGG 1 cut(s) 100
BcoDI GTCTC 1 cut(s) 226
BfmI CTRYAG 1 cut(s) 460
BisI GCNGC 1 cut(s) 69
BlsI GCNGC 1 cut(s) 70
Bme1390I CCNGG 4 cut(s) 100, 183, 356, 399
Bme18I GGWCC 1 cut(s) 102
BmgT120I GGNCC 1 cut(s) 102
BmiI GGNNCC 2 cut(s) 94, 104
BmrFI CCNGG 4 cut(s) 100, 183, 356, 399
BmsI GCATC 1 cut(s) 465
BpiI GAAGAC 1 cut(s) 339
BpmI CTGGAG 1 cut(s) 145
BpuMI CCSGG 1 cut(s) 100
BsaXI ACNNNNNCTCC 4 cut(s) 128, 143, 158, 173
Bsc4I CCNNNNNNNGG 3 cut(s) 89, 369, 513
Bse1I ACTGG 2 cut(s) 43, 83
Bse3DI GCAATG 1 cut(s) 397
BseBI CCWGG 3 cut(s) 183, 356, 399
BseLI CCNNNNNNNGG 3 cut(s) 89, 369, 513
BseMI GCAATG 1 cut(s) 397
BseMII CTCAG 2 cut(s) 249, 267
BseNI ACTGG 2 cut(s) 43, 83
BseSI GKGCMC 1 cut(s) 328
BseXI GCAGC 1 cut(s) 80
BseYI CCCAGC 1 cut(s) 301
BshNI GGYRCC 1 cut(s) 92
BsiHKAI GWGCWC 1 cut(s) 328
BsiSI CCGG 1 cut(s) 100
BslFI GGGAC 1 cut(s) 88
BslI CCNNNNNNNGG 3 cut(s) 89, 369, 513
BsmAI GTCTC 1 cut(s) 226
BsmFI GGGAC 1 cut(s) 88
Bsp1286I GDGCHC 1 cut(s) 328
Bsp143I GATC 2 cut(s) 315, 501
BspCNI CTCAG 2 cut(s) 248, 266
BspLI GGNNCC 2 cut(s) 94, 104
BspPI GGATC 1 cut(s) 323
BspT107I GGYRCC 1 cut(s) 92
BsrDI GCAATG 1 cut(s) 397
BsrI ACTGG 2 cut(s) 43, 83
BssMI GATC 2 cut(s) 315, 501
Bst2UI CCWGG 3 cut(s) 183, 356, 399
Bst4CI ACNGT 1 cut(s) 430
BstDEI CTNAG 2 cut(s) 235, 253
BstKTI GATC 2 cut(s) 318, 504
BstMAI GTCTC 1 cut(s) 226
BstMBI GATC 2 cut(s) 315, 501
BstMWI GCNNNNNNNGC 2 cut(s) 74, 462
BstNI CCWGG 3 cut(s) 183, 356, 399
BstSCI CCNGG 4 cut(s) 98, 181, 354, 397
BstSFI CTRYAG 1 cut(s) 460
BstSLI GKGCMC 1 cut(s) 328
BstV1I GCAGC 1 cut(s) 80
BstV2I GAAGAC 1 cut(s) 339
BtsIMutI CAGTG 1 cut(s) 261
CaiI CAGNNNCTG 1 cut(s) 188
Cfr13I GGNCC 1 cut(s) 102
CsiI ACCWGGT 1 cut(s) 181
Csp6I GTAC 1 cut(s) 93
CviJI RGCY 5 cut(s) 77, 171, 305, 446, 465
CviKI_1 RGCY 5 cut(s) 77, 171, 305, 446, 465
CviQI GTAC 1 cut(s) 93
DdeI CTNAG 2 cut(s) 235, 253
DpnI GATC 2 cut(s) 317, 503
DpnII GATC 2 cut(s) 315, 501
Eco47I GGWCC 1 cut(s) 102
Eco57I CTGAAG 2 cut(s) 210, 366
EcoRII CCWGG 3 cut(s) 181, 354, 397
FaiI YATR 8 cut(s) 52, 179, 209, 243, 245, 279, 388, 511
FaqI GGGAC 1 cut(s) 88
FblI GTMKAC 1 cut(s) 285
Fnu4HI GCNGC 1 cut(s) 69
Fsp4HI GCNGC 1 cut(s) 69
GluI GCNGC 1 cut(s) 69
GsaI CCCAGC 1 cut(s) 305
GsuI CTGGAG 1 cut(s) 145
HapII CCGG 1 cut(s) 100
HinfI GANTC 2 cut(s) 4, 332
HpaII CCGG 1 cut(s) 100
HphI GGTGA 2 cut(s) 216, 496
Hpy166II GTNNAC 3 cut(s) 259, 286, 326
Hpy188I TCNGA 3 cut(s) 238, 418, 485
Hpy188III TCNNGA 1 cut(s) 162
Hpy8I GTNNAC 3 cut(s) 259, 286, 326
HpyAV CCTTC 1 cut(s) 166
HpyCH4III ACNGT 1 cut(s) 430
HpyCH4V TGCA 4 cut(s) 207, 326, 390, 456
HpyF10VI GCNNNNNNNGC 2 cut(s) 74, 462
HpyF3I CTNAG 2 cut(s) 235, 253
KpnI GGTACC 1 cut(s) 96
Kzo9I GATC 2 cut(s) 315, 501
LmnI GCTCC 1 cut(s) 149
Lsp1109I GCAGC 1 cut(s) 80
LweI GCATC 1 cut(s) 465
MabI ACCWGGT 1 cut(s) 181
MaeIII GTNAC 2 cut(s) 134, 401
MalI GATC 2 cut(s) 317, 503
MboI GATC 2 cut(s) 315, 501
MboII GAAGA 2 cut(s) 339, 372
MhlI GDGCHC 1 cut(s) 328
MluCI AATT 2 cut(s) 478, 523
MmeI TCCRAC 2 cut(s) 171, 273
MnlI CCTC 2 cut(s) 244, 304
MseI TTAA 2 cut(s) 195, 365
MspA1I CMGCKG 1 cut(s) 305
MspI CCGG 1 cut(s) 100
MspR9I CCNGG 4 cut(s) 100, 183, 356, 399
MvaI CCWGG 3 cut(s) 183, 356, 399
MwoI GCNNNNNNNGC 2 cut(s) 74, 462
NciI CCSGG 1 cut(s) 100
NdeII GATC 2 cut(s) 315, 501
NlaIV GGNNCC 2 cut(s) 94, 104
NmuCI GTSAC 1 cut(s) 134
PfeI GAWTC 2 cut(s) 4, 332
PkrI GCNGC 1 cut(s) 70
Psp6I CCWGG 3 cut(s) 181, 354, 397
PspFI CCCAGC 1 cut(s) 301
PspGI CCWGG 3 cut(s) 181, 354, 397
PspN4I GGNNCC 2 cut(s) 94, 104
PspPI GGNCC 1 cut(s) 102
PsrI GAACNNNNNNTAC 2 cut(s) 378, 410
PstNI CAGNNNCTG 1 cut(s) 188
PvuII CAGCTG 1 cut(s) 305
RsaI GTAC 1 cut(s) 94
RsaNI GTAC 1 cut(s) 93
SaqAI TTAA 2 cut(s) 195, 365
SatI GCNGC 1 cut(s) 69
Sau3AI GATC 2 cut(s) 315, 501
Sau96I GGNCC 1 cut(s) 102
ScrFI CCNGG 4 cut(s) 100, 183, 356, 399
SduI GDGCHC 1 cut(s) 328
SetI ASST 9 cut(s) 79, 94, 158, 173, 187, 236, 307, 365, 509
SexAI ACCWGGT 1 cut(s) 181
SfaNI GCATC 1 cut(s) 465
SfcI CTRYAG 1 cut(s) 460
SinI GGWCC 1 cut(s) 102
Sse9I AATT 2 cut(s) 478, 523
StyD4I CCNGG 4 cut(s) 98, 181, 354, 397
TaaI ACNGT 1 cut(s) 430
TasI AATT 2 cut(s) 478, 523
TfiI GAWTC 2 cut(s) 4, 332
Tru1I TTAA 2 cut(s) 195, 365
Tru9I TTAA 2 cut(s) 195, 365
TscAI CASTG 1 cut(s) 261
TseFI GTSAC 1 cut(s) 134
TseI GCWGC 1 cut(s) 68
Tsp45I GTSAC 1 cut(s) 134
TspDTI ATGAA 5 cut(s) 17, 18, 166, 366, 435
TspRI CASTG 1 cut(s) 261
VneI GTGCAC 1 cut(s) 324
VpaK11BI GGWCC 1 cut(s) 102
XapI RAATTY 1 cut(s) 478
XmiI GTMKAC 1 cut(s) 285
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.