PDDEXK-like family of unknown function
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G12030 AT1G62420 |
| fragaria_vesca | FvH4_3g01080 |
| malus_domestica | MD05G1356900.v1.1 MD10G1330600.v1.1 |
| prunus_persica | Prupe.4G011900_v2.0.a1 |
| pyrus_communis | pycom10g27990 pycom10g28000 |
| rosa_chinensis | RchiOBHm_Chr5g0001631 |
| rosa_laevigata | RLG00000030951 |
| rosa_multiflora | Rmu_sc0006320.1_g000001 Rmu_sc0008804.1_g000004 |
| rosa_roxburghii | Rroxscaffold_1G00074690 |
| rosa_rugosa | Rorug04G0391500.1 |
| rosa_samantha | Rh5AG013000 Rh5BG016300 Rh5CG014000 Rh5DG014000 |
| rosa_wichuraiana | Rw5G001240 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 2 cut(s) | 61, 411 |
| AciI | CCGC | 7 cut(s) | 41, 61, 101, 104, 107, 473, 657 |
| AcsI | RAATTY | 2 cut(s) | 485, 545 |
| AcuI | CTGAAG | 1 cut(s) | 650 |
| AfaI | GTAC | 2 cut(s) | 615, 719 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 475 |
| AgsI | TTSAA | 5 cut(s) | 152, 269, 338, 385, 527 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 330, 362 |
| AluBI | AGCT | 2 cut(s) | 114, 628 |
| AluI | AGCT | 2 cut(s) | 114, 628 |
| Alw21I | GWGCWC | 2 cut(s) | 96, 656 |
| Alw26I | GTCTC | 1 cut(s) | 245 |
| Alw44I | GTGCAC | 1 cut(s) | 652 |
| Ama87I | CYCGRG | 1 cut(s) | 376 |
| ApaLI | GTGCAC | 1 cut(s) | 652 |
| ApeKI | GCWGC | 3 cut(s) | 5, 38, 905 |
| ApoI | RAATTY | 2 cut(s) | 485, 545 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 419 |
| AspLEI | GCGC | 3 cut(s) | 61, 411, 753 |
| AsuC2I | CCSGG | 2 cut(s) | 377, 378 |
| AsuHPI | GGTGA | 1 cut(s) | 463 |
| AsuII | TTCGAA | 1 cut(s) | 549 |
| AsuNHI | GCTAGC | 1 cut(s) | 869 |
| AvaI | CYCGRG | 1 cut(s) | 376 |
| BaeGI | GKGCMC | 1 cut(s) | 656 |
| BauI | CACGAG | 1 cut(s) | 565 |
| BbsI | GAAGAC | 1 cut(s) | 586 |
| Bbv12I | GWGCWC | 2 cut(s) | 96, 656 |
| BbvCI | CCTCAGC | 1 cut(s) | 330 |
| BbvI | GCAGC | 3 cut(s) | 17, 50, 892 |
| BccI | CCATC | 3 cut(s) | 208, 391, 668 |
| BcnI | CCSGG | 2 cut(s) | 377, 378 |
| BcoDI | GTCTC | 1 cut(s) | 245 |
| BfaI | CTAG | 1 cut(s) | 870 |
| BisI | GCNGC | 6 cut(s) | 6, 39, 42, 102, 105, 906 |
| BlsI | GCNGC | 6 cut(s) | 7, 40, 43, 103, 106, 907 |
| Bme1390I | CCNGG | 2 cut(s) | 377, 378 |
| BmeT110I | CYCGRG | 1 cut(s) | 376 |
| BmiI | GGNNCC | 3 cut(s) | 15, 467, 742 |
| BmrFI | CCNGG | 2 cut(s) | 377, 378 |
| BmsI | GCATC | 3 cut(s) | 169, 415, 850 |
| BmtI | GCTAGC | 1 cut(s) | 873 |
| BoxI | GACNNNNGTC | 1 cut(s) | 608 |
| BpiI | GAAGAC | 1 cut(s) | 586 |
| Bpu10I | CCTNAGC | 1 cut(s) | 330 |
| Bpu14I | TTCGAA | 1 cut(s) | 549 |
| BpuMI | CCSGG | 2 cut(s) | 377, 378 |
| BsaI | GGTCTC | 1 cut(s) | 245 |
| BsaJI | CCNNGG | 6 cut(s) | 9, 375, 376, 377, 701, 774 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 209, 239 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 475 |
| Bse118I | RCCGGY | 1 cut(s) | 462 |
| Bse1I | ACTGG | 1 cut(s) | 17 |
| BseDI | CCNNGG | 6 cut(s) | 9, 375, 376, 377, 701, 774 |
| BseGI | GGATG | 2 cut(s) | 184, 301 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 475 |
| BseMII | CTCAG | 1 cut(s) | 321 |
| BseNI | ACTGG | 1 cut(s) | 17 |
| BseRI | GAGGAG | 4 cut(s) | 171, 183, 638, 721 |
| BseSI | GKGCMC | 1 cut(s) | 656 |
| BseXI | GCAGC | 3 cut(s) | 17, 50, 892 |
| BseYI | CCCAGC | 1 cut(s) | 469 |
| Bsh1236I | CGCG | 2 cut(s) | 61, 411 |
| BsiHKAI | GWGCWC | 2 cut(s) | 96, 656 |
| BsiHKCI | CYCGRG | 1 cut(s) | 376 |
| BsiSI | CCGG | 2 cut(s) | 377, 463 |
| BslFI | GGGAC | 3 cut(s) | 358, 523, 546 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 475 |
| BsmAI | GTCTC | 1 cut(s) | 245 |
| BsmFI | GGGAC | 3 cut(s) | 358, 523, 546 |
| Bso31I | GGTCTC | 1 cut(s) | 245 |
| BsoBI | CYCGRG | 1 cut(s) | 376 |
| Bsp119I | TTCGAA | 1 cut(s) | 549 |
| Bsp1286I | GDGCHC | 2 cut(s) | 96, 656 |
| Bsp143I | GATC | 1 cut(s) | 812 |
| Bsp19I | CCATGG | 1 cut(s) | 701 |
| BspACI | CCGC | 7 cut(s) | 41, 61, 101, 104, 107, 473, 657 |
| BspCNI | CTCAG | 1 cut(s) | 322 |
| BspFNI | CGCG | 2 cut(s) | 61, 411 |
| BspLI | GGNNCC | 3 cut(s) | 15, 467, 742 |
| BspOI | GCTAGC | 1 cut(s) | 873 |
| BspQI | GCTCTTC | 1 cut(s) | 671 |
| BspT104I | TTCGAA | 1 cut(s) | 549 |
| BspTNI | GGTCTC | 1 cut(s) | 245 |
| BsrFI | RCCGGY | 1 cut(s) | 462 |
| BsrI | ACTGG | 1 cut(s) | 17 |
| BssAI | RCCGGY | 1 cut(s) | 462 |
| BssECI | CCNNGG | 6 cut(s) | 9, 375, 376, 377, 701, 774 |
| BssMI | GATC | 1 cut(s) | 812 |
| BssSI | CACGAG | 1 cut(s) | 565 |
| BssT1I | CCWWGG | 3 cut(s) | 9, 701, 774 |
| Bst2BI | CACGAG | 1 cut(s) | 565 |
| Bst4CI | ACNGT | 1 cut(s) | 435 |
| Bst6I | CTCTTC | 2 cut(s) | 216, 671 |
| BstBI | TTCGAA | 1 cut(s) | 549 |
| BstC8I | GCNNGC | 4 cut(s) | 63, 92, 275, 871 |
| BstDEI | CTNAG | 2 cut(s) | 330, 587 |
| BstDSI | CCRYGG | 1 cut(s) | 701 |
| BstF5I | GGATG | 2 cut(s) | 184, 301 |
| BstFNI | CGCG | 2 cut(s) | 61, 411 |
| BstHHI | GCGC | 3 cut(s) | 61, 411, 753 |
| BstKTI | GATC | 1 cut(s) | 815 |
| BstMAI | GTCTC | 1 cut(s) | 245 |
| BstMBI | GATC | 1 cut(s) | 812 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 67, 87, 770 |
| BstNSI | RCATGY | 2 cut(s) | 691, 724 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 608 |
| BstSCI | CCNGG | 2 cut(s) | 375, 376 |
| BstSLI | GKGCMC | 1 cut(s) | 656 |
| BstUI | CGCG | 2 cut(s) | 61, 411 |
| BstV1I | GCAGC | 3 cut(s) | 17, 50, 892 |
| BstV2I | GAAGAC | 1 cut(s) | 586 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 781 |
| BtgI | CCRYGG | 1 cut(s) | 701 |
| BtsCI | GGATG | 2 cut(s) | 184, 301 |
| BtsI | GCAGTG | 1 cut(s) | 88 |
| BtsIMutI | CAGTG | 2 cut(s) | 24, 88 |
| Cac8I | GCNNGC | 4 cut(s) | 63, 92, 275, 871 |
| CfoI | GCGC | 3 cut(s) | 61, 411, 753 |
| Cfr10I | RCCGGY | 1 cut(s) | 462 |
| Cfr9I | CCCGGG | 1 cut(s) | 376 |
| Csp6I | GTAC | 2 cut(s) | 614, 718 |
| CviAII | CATG | 4 cut(s) | 649, 688, 702, 721 |
| CviQI | GTAC | 2 cut(s) | 614, 718 |
| DdeI | CTNAG | 2 cut(s) | 330, 587 |
| DpnI | GATC | 1 cut(s) | 814 |
| DpnII | GATC | 1 cut(s) | 812 |
| Eam1104I | CTCTTC | 2 cut(s) | 216, 671 |
| EarI | CTCTTC | 2 cut(s) | 216, 671 |
| EciI | GGCGGA | 1 cut(s) | 122 |
| Eco130I | CCWWGG | 3 cut(s) | 9, 701, 774 |
| Eco31I | GGTCTC | 1 cut(s) | 245 |
| Eco57I | CTGAAG | 1 cut(s) | 650 |
| Eco88I | CYCGRG | 1 cut(s) | 376 |
| EcoRI | GAATTC | 1 cut(s) | 545 |
| EcoT14I | CCWWGG | 3 cut(s) | 9, 701, 774 |
| ErhI | CCWWGG | 3 cut(s) | 9, 701, 774 |
| FaeI | CATG | 4 cut(s) | 652, 691, 705, 724 |
| FaiI | YATR | 7 cut(s) | 194, 483, 501, 650, 689, 703, 722 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 570, 602 |
| FaqI | GGGAC | 3 cut(s) | 358, 523, 546 |
| FatI | CATG | 4 cut(s) | 648, 687, 701, 720 |
| FauI | CCCGC | 2 cut(s) | 54, 466 |
| Fnu4HI | GCNGC | 6 cut(s) | 6, 39, 42, 102, 105, 906 |
| FokI | GGATG | 2 cut(s) | 191, 308 |
| Fsp4HI | GCNGC | 6 cut(s) | 6, 39, 42, 102, 105, 906 |
| FspBI | CTAG | 1 cut(s) | 870 |
| GlaI | GCGC | 3 cut(s) | 60, 410, 752 |
| GluI | GCNGC | 6 cut(s) | 6, 39, 42, 102, 105, 906 |
| GsaI | CCCAGC | 1 cut(s) | 473 |
| HapII | CCGG | 2 cut(s) | 377, 463 |
| HhaI | GCGC | 3 cut(s) | 61, 411, 753 |
| Hin1II | CATG | 4 cut(s) | 652, 691, 705, 724 |
| Hin6I | GCGC | 3 cut(s) | 59, 409, 751 |
| HinP1I | GCGC | 3 cut(s) | 59, 409, 751 |
| HincII | GTYRAC | 1 cut(s) | 139 |
| HindII | GTYRAC | 1 cut(s) | 139 |
| HinfI | GANTC | 4 cut(s) | 224, 245, 511, 568 |
| HpaII | CCGG | 2 cut(s) | 377, 463 |
| HphI | GGTGA | 1 cut(s) | 463 |
| Hpy166II | GTNNAC | 3 cut(s) | 139, 654, 685 |
| Hpy188I | TCNGA | 7 cut(s) | 30, 121, 167, 229, 244, 250, 923 |
| Hpy188III | TCNNGA | 1 cut(s) | 598 |
| Hpy8I | GTNNAC | 3 cut(s) | 139, 654, 685 |
| Hpy99I | CGWCG | 2 cut(s) | 604, 614 |
| HpyAV | CCTTC | 3 cut(s) | 167, 275, 409 |
| HpyCH4III | ACNGT | 1 cut(s) | 435 |
| HpyCH4V | TGCA | 5 cut(s) | 438, 654, 724, 764, 855 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 67, 87, 770 |
| HpyF3I | CTNAG | 2 cut(s) | 330, 587 |
| Hsp92II | CATG | 4 cut(s) | 652, 691, 705, 724 |
| HspAI | GCGC | 3 cut(s) | 59, 409, 751 |
| Kzo9I | GATC | 1 cut(s) | 812 |
| LguI | GCTCTTC | 1 cut(s) | 671 |
| LmnI | GCTCC | 3 cut(s) | 205, 625, 746 |
| LpnPI | CCDG | 9 cut(s) | 30, 287, 390, 414, 472, 476, 483, 783, 899 |
| Lsp1109I | GCAGC | 3 cut(s) | 17, 50, 892 |
| LweI | GCATC | 3 cut(s) | 169, 415, 850 |
| MaeI | CTAG | 1 cut(s) | 870 |
| MaeIII | GTNAC | 2 cut(s) | 287, 515 |
| MalI | GATC | 1 cut(s) | 814 |
| MboI | GATC | 1 cut(s) | 812 |
| MboII | GAAGA | 6 cut(s) | 200, 233, 526, 586, 643, 688 |
| MhlI | GDGCHC | 2 cut(s) | 96, 656 |
| MluCI | AATT | 3 cut(s) | 485, 545, 636 |
| MlyI | GAGTC | 3 cut(s) | 233, 505, 577 |
| MmeI | TCCRAC | 3 cut(s) | 207, 328, 762 |
| MroXI | GAANNNNTTC | 1 cut(s) | 419 |
| MseI | TTAA | 2 cut(s) | 884, 899 |
| MslI | CAYNNNNRTG | 1 cut(s) | 692 |
| MspA1I | CMGCKG | 2 cut(s) | 41, 473 |
| MspI | CCGG | 2 cut(s) | 377, 463 |
| MspR9I | CCNGG | 2 cut(s) | 377, 378 |
| MvnI | CGCG | 2 cut(s) | 61, 411 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 67, 87, 770 |
| NciI | CCSGG | 2 cut(s) | 377, 378 |
| NcoI | CCATGG | 1 cut(s) | 701 |
| NdeII | GATC | 1 cut(s) | 812 |
| NheI | GCTAGC | 1 cut(s) | 869 |
| NlaIII | CATG | 4 cut(s) | 652, 691, 705, 724 |
| NlaIV | GGNNCC | 3 cut(s) | 15, 467, 742 |
| NmeAIII | GCCGAG | 1 cut(s) | 77 |
| NmuCI | GTSAC | 1 cut(s) | 287 |
| NspI | RCATGY | 2 cut(s) | 691, 724 |
| NspV | TTCGAA | 1 cut(s) | 549 |
| PciSI | GCTCTTC | 1 cut(s) | 671 |
| PdmI | GAANNNNTTC | 1 cut(s) | 419 |
| PfeI | GAWTC | 1 cut(s) | 245 |
| PkrI | GCNGC | 6 cut(s) | 7, 40, 43, 103, 106, 907 |
| PleI | GAGTC | 3 cut(s) | 232, 505, 576 |
| PpsI | GAGTC | 3 cut(s) | 232, 505, 576 |
| PshAI | GACNNNNGTC | 1 cut(s) | 608 |
| PspFI | CCCAGC | 1 cut(s) | 469 |
| PspN4I | GGNNCC | 3 cut(s) | 15, 467, 742 |
| RsaI | GTAC | 2 cut(s) | 615, 719 |
| RsaNI | GTAC | 2 cut(s) | 614, 718 |
| RseI | CAYNNNNRTG | 1 cut(s) | 692 |
| SapI | GCTCTTC | 1 cut(s) | 671 |
| SaqAI | TTAA | 2 cut(s) | 884, 899 |
| SatI | GCNGC | 6 cut(s) | 6, 39, 42, 102, 105, 906 |
| Sau3AI | GATC | 1 cut(s) | 812 |
| SchI | GAGTC | 3 cut(s) | 233, 505, 577 |
| ScrFI | CCNGG | 2 cut(s) | 377, 378 |
| SduI | GDGCHC | 2 cut(s) | 96, 656 |
| SetI | ASST | 6 cut(s) | 15, 26, 116, 336, 371, 630 |
| SfaNI | GCATC | 3 cut(s) | 169, 415, 850 |
| SfuI | TTCGAA | 1 cut(s) | 549 |
| SmaI | CCCGGG | 1 cut(s) | 378 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 692 |
| Sse9I | AATT | 3 cut(s) | 485, 545, 636 |
| SsiI | CCGC | 7 cut(s) | 41, 61, 101, 104, 107, 473, 657 |
| SspMI | CTAG | 1 cut(s) | 870 |
| StyD4I | CCNGG | 2 cut(s) | 375, 376 |
| StyI | CCWWGG | 3 cut(s) | 9, 701, 774 |
| TaaI | ACNGT | 1 cut(s) | 435 |
| TaqI | TCGA | 4 cut(s) | 48, 423, 549, 671 |
| TasI | AATT | 3 cut(s) | 485, 545, 636 |
| TauI | GCSGC | 3 cut(s) | 44, 104, 107 |
| TfiI | GAWTC | 1 cut(s) | 245 |
| Tru1I | TTAA | 2 cut(s) | 884, 899 |
| Tru9I | TTAA | 2 cut(s) | 884, 899 |
| TscAI | CASTG | 2 cut(s) | 24, 88 |
| TseFI | GTSAC | 1 cut(s) | 287 |
| TseI | GCWGC | 3 cut(s) | 5, 38, 905 |
| Tsp45I | GTSAC | 1 cut(s) | 287 |
| TspDTI | ATGAA | 3 cut(s) | 136, 498, 689 |
| TspMI | CCCGGG | 1 cut(s) | 376 |
| TspRI | CASTG | 2 cut(s) | 24, 88 |
| VneI | GTGCAC | 1 cut(s) | 652 |
| XapI | RAATTY | 2 cut(s) | 485, 545 |
| XceI | RCATGY | 2 cut(s) | 691, 724 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 699 |
| XmaI | CCCGGG | 1 cut(s) | 376 |
| XmnI | GAANNNNTTC | 1 cut(s) | 419 |
| XspI | CTAG | 1 cut(s) | 870 |