Prupe.4G036600_v2.0.a1

Telomerase Cajal body protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
1734629 .. 1738890
4262 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G036600.1

Sequence Viewer

Length: 1272 bp
ATGGGAGAAGAAGAGCAGCGTCGCCAACCCCATTCGCCCAACCCAGACACAGAAATTACTGAAAACCCAACGGAGCAAGACTACGCTTGGCCTGCGATTCGGTTCGATGTTCCTCCACAGAGAACCTACCACTTCTGCCACCAGTTCAGAGCTTCTCCAAACCCCAACAACTTTCTCAAGGGCGTCAAATGGTCTCCAGATGGGTCGTGCTTTCTTACCAGTTCCGAGGACAATATGCTTCGTGTTTTCGCATTACCAGATTATGGGAGTGATAATGTTAACGCGTGTTCTGTAGCTGCTGATGAAGATTCCTATGCTGCAAACAGTGTTGTGAATGAGGGAGAGTCCGTATATGACTTCTGTTGGTACCCGTACATGTCTGCTTCAGACCCGGTTACCAGTGTTTTTGCAACAACATCTCGTGACCATCCAATTCATCTTTGGGATGCTTCTTCGGGGCAGCTACGTTGCACGTATCGTGCTTATGATGCCGTGGATGAAATCACAGCTGCCTTTTCAATTGCCTTTAATCCCACTGGAACGAAGATTTTTGCTGGATACAACAAATCTGTTAGGGTGTTTGATTTACATCGTCCTGGTAGGGATTTTGAACAGTATTCAACTGTTCAAGGAAACAAAGAAGGCCAAACTGGTATAATGTCTGCAATGGCTTTTTGTCCAACCCATAGTGGAATGCTAGCTATAGGTTCTTACAGCAAGACAGCTGCAATATATAGAGAAGATAATATGGAACTCTTATATGTATTGCATGGTCATGAAGGTGGGATTACTCATGTCCAGTTTTCAAAGGATGGAAATTATTTATATACTGGAGGCCGGAAGGATCCTTATATACTATGCTGGGATATGCGCAAAGCTGTAGATGTTGTGTACAAGTTATACAGGTCATCGGAAGATACCAACCAGCGAATTCTGTTTGATATTGACCCACTTGGCCGACATCTTTGTACAGGTGGCCAGGACGGTATTGTTCATACCTATGATCTTCAAACTGGACAATGGGTATCAGGCTTCCAAGCTGCATTGGATACCATTAACGGGTTCTCTTTTCATCCCTTTCTCCCCATGGCTACATCTTCTTCTGGGCAGCGAAGATTTGTTGGTCCTGATGATGGCAATGAGGAATTGCATTTAAGTGGTGAAGAAAACTGTGCTTCTGTGTGGAGTTTCTCTGTTGCTTCAGTGGTGGAGAATGATGTTAACATTGACGGTGATGATCATAATAGCCATAACCTGCACCAAGATCCCTAG

Protein Analysis

424

Amino Acids

47.29

Weight (kDa)

4.85

Isoelectric Point (pI)

44.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 872
Acc36I ACCTGC 1 cut(s) 1263
Acc65I GGTACC 1 cut(s) 366
AccB1I GGYRCC 1 cut(s) 366
AccB7I CCANNNNNTGG 1 cut(s) 263
AccII CGCG 1 cut(s) 284
AclWI GGATC 3 cut(s) 839, 852, 1259
AcoI YGGCCR 2 cut(s) 955, 976
AcsI RAATTY 1 cut(s) 930
AcuI CTGAAG 2 cut(s) 369, 1185
AcyI GRCGYC 1 cut(s) 183
AfaI GTAC 4 cut(s) 368, 374, 893, 970
AfiI CCNNNNNNNGG 3 cut(s) 263, 1059, 1133
AflIII ACRYGT 2 cut(s) 282, 375
AgsI TTSAA 6 cut(s) 519, 611, 621, 629, 807, 1010
AjnI CCWGG 2 cut(s) 595, 978
AluBI AGCT 8 cut(s) 152, 296, 463, 509, 701, 725, 878, 1040
AluI AGCT 8 cut(s) 152, 296, 463, 509, 701, 725, 878, 1040
Alw26I GTCTC 1 cut(s) 198
AlwI GGATC 3 cut(s) 839, 852, 1259
AoxI GGCC 5 cut(s) 89, 643, 835, 955, 976
ApeKI GCWGC 8 cut(s) 16, 296, 317, 460, 509, 725, 1040, 1108
ApoI RAATTY 1 cut(s) 930
Asp718I GGTACC 1 cut(s) 366
AspLEI GCGC 1 cut(s) 873
AspS9I GGNCC 1 cut(s) 1124
AsuC2I CCSGG 1 cut(s) 392
AsuHPI GGTGA 2 cut(s) 1172, 1244
AsuNHI GCTAGC 1 cut(s) 697
AvaII GGWCC 1 cut(s) 1124
BalI TGGCCA 1 cut(s) 978
BamHI GGATCC 1 cut(s) 844
BanI GGYRCC 1 cut(s) 366
BauI CACGAG 1 cut(s) 420
BbvI GCAGC 8 cut(s) 28, 283, 304, 472, 496, 712, 1027, 1120
BccI CCATC 4 cut(s) 194, 435, 806, 1127
BceAI ACGGC 1 cut(s) 476
BciT130I CCWGG 2 cut(s) 597, 980
BciVI GTATCC 2 cut(s) 551, 1042
BclI TGATCA 1 cut(s) 1237
BcnI CCSGG 1 cut(s) 392
BcoDI GTCTC 1 cut(s) 198
BfaI CTAG 2 cut(s) 698, 1270
BfmI CTRYAG 3 cut(s) 291, 702, 879
BfuAI ACCTGC 1 cut(s) 1263
BfuI GTATCC 2 cut(s) 551, 1042
BisI GCNGC 8 cut(s) 17, 297, 318, 461, 510, 726, 1041, 1109
BlsI GCNGC 8 cut(s) 18, 298, 319, 462, 511, 727, 1042, 1110
Bme1390I CCNGG 3 cut(s) 392, 597, 980
Bme18I GGWCC 1 cut(s) 1124
BmgT120I GGNCC 1 cut(s) 1124
BmiI GGNNCC 2 cut(s) 368, 846
BmrFI CCNGG 3 cut(s) 392, 597, 980
BmsI GCATC 2 cut(s) 436, 478
BmtI GCTAGC 1 cut(s) 701
BpmI CTGGAG 2 cut(s) 180, 852
BpuEI CTTGAG 1 cut(s) 161
BpuMI CCSGG 1 cut(s) 392
BsaAI YACGTR 1 cut(s) 474
BsaBI GATNNNNATC 1 cut(s) 588
BsaHI GRCGYC 1 cut(s) 183
BsaI GGTCTC 1 cut(s) 198
BsaJI CCNNGG 3 cut(s) 225, 492, 1086
BsaXI ACNNNNNCTCC 2 cut(s) 333, 363
Bsc4I CCNNNNNNNGG 3 cut(s) 263, 1059, 1133
Bse1I ACTGG 8 cut(s) 142, 219, 399, 541, 655, 799, 835, 1018
Bse3DI GCAATG 2 cut(s) 672, 1144
Bse8I GATNNNNATC 1 cut(s) 588
BseBI CCWGG 2 cut(s) 597, 980
BseDI CCNNGG 3 cut(s) 225, 492, 1086
BseGI GGATG 5 cut(s) 427, 451, 502, 817, 1072
BseJI GATNNNNATC 1 cut(s) 588
BseLI CCNNNNNNNGG 3 cut(s) 263, 1059, 1133
BseMI GCAATG 2 cut(s) 672, 1144
BseNI ACTGG 8 cut(s) 142, 219, 399, 541, 655, 799, 835, 1018
BseXI GCAGC 8 cut(s) 28, 283, 304, 472, 496, 712, 1027, 1120
BseYI CCCAGC 1 cut(s) 861
BsgI GTGCAG 1 cut(s) 1241
Bsh1236I CGCG 1 cut(s) 284
BshFI GGCC 5 cut(s) 91, 645, 837, 957, 978
BshNI GGYRCC 1 cut(s) 366
BsiSI CCGG 2 cut(s) 392, 838
BslI CCNNNNNNNGG 3 cut(s) 263, 1059, 1133
BsmAI GTCTC 1 cut(s) 198
BsmI GAATGC 1 cut(s) 699
BsnI GGCC 5 cut(s) 91, 645, 837, 957, 978
Bso31I GGTCTC 1 cut(s) 198
Bsp1407I TGTACA 2 cut(s) 891, 968
Bsp143I GATC 4 cut(s) 844, 1003, 1237, 1264
Bsp19I CCATGG 1 cut(s) 1086
BspANI GGCC 5 cut(s) 91, 645, 837, 957, 978
BspFNI CGCG 1 cut(s) 284
BspHI TCATGA 1 cut(s) 775
BspLI GGNNCC 2 cut(s) 368, 846
BspMI ACCTGC 1 cut(s) 1263
BspOI GCTAGC 1 cut(s) 701
BspPI GGATC 3 cut(s) 839, 852, 1259
BspQI GCTCTTC 1 cut(s) 6
BspT107I GGYRCC 1 cut(s) 366
BspTNI GGTCTC 1 cut(s) 198
BsrDI GCAATG 2 cut(s) 672, 1144
BsrGI TGTACA 2 cut(s) 891, 968
BsrI ACTGG 8 cut(s) 142, 219, 399, 541, 655, 799, 835, 1018
BssECI CCNNGG 3 cut(s) 225, 492, 1086
BssMI GATC 4 cut(s) 844, 1003, 1237, 1264
BssNI GRCGYC 1 cut(s) 183
BssSI CACGAG 1 cut(s) 420
BssT1I CCWWGG 1 cut(s) 1086
Bst2BI CACGAG 1 cut(s) 420
Bst2UI CCWGG 2 cut(s) 597, 980
Bst4CI ACNGT 6 cut(s) 326, 615, 625, 986, 1172, 1232
Bst6I CTCTTC 1 cut(s) 6
BstACI GRCGYC 1 cut(s) 183
BstAUI TGTACA 2 cut(s) 891, 968
BstBAI YACGTR 1 cut(s) 474
BstC8I GCNNGC 2 cut(s) 93, 699
BstDSI CCRYGG 2 cut(s) 492, 1086
BstEII GGTNACC 1 cut(s) 394
BstF5I GGATG 5 cut(s) 427, 451, 502, 817, 1072
BstFNI CGCG 1 cut(s) 284
BstHHI GCGC 1 cut(s) 873
BstKTI GATC 4 cut(s) 847, 1006, 1240, 1267
BstMAI GTCTC 1 cut(s) 198
BstMBI GATC 4 cut(s) 844, 1003, 1237, 1264
BstMWI GCNNNNNNNGC 2 cut(s) 92, 488
BstNI CCWGG 2 cut(s) 597, 980
BstNSI RCATGY 1 cut(s) 379
BstPI GGTNACC 1 cut(s) 394
BstSCI CCNGG 3 cut(s) 390, 595, 978
BstSFI CTRYAG 3 cut(s) 291, 702, 879
BstUI CGCG 1 cut(s) 284
BstV1I GCAGC 8 cut(s) 28, 283, 304, 472, 496, 712, 1027, 1120
BstX2I RGATCY 2 cut(s) 844, 1264
BstYI RGATCY 2 cut(s) 844, 1264
BsuI GTATCC 2 cut(s) 551, 1042
BsuRI GGCC 5 cut(s) 91, 645, 837, 957, 978
BtgI CCRYGG 2 cut(s) 492, 1086
BtsCI GGATG 5 cut(s) 427, 451, 502, 817, 1072
BtsIMutI CAGTG 4 cut(s) 331, 406, 534, 1209
BveI ACCTGC 1 cut(s) 1263
Cac8I GCNNGC 2 cut(s) 93, 699
CciI TCATGA 1 cut(s) 775
CfoI GCGC 1 cut(s) 873
Cfr13I GGNCC 1 cut(s) 1124
CseI GACGC 2 cut(s) 8, 172
Csp6I GTAC 4 cut(s) 367, 373, 892, 969
CviAII CATG 5 cut(s) 376, 770, 776, 794, 1087
CviQI GTAC 4 cut(s) 367, 373, 892, 969
DpnI GATC 4 cut(s) 846, 1005, 1239, 1266
DpnII GATC 4 cut(s) 844, 1003, 1237, 1264
EaeI YGGCCR 2 cut(s) 955, 976
Eam1104I CTCTTC 1 cut(s) 6
EarI CTCTTC 1 cut(s) 6
Eco130I CCWWGG 1 cut(s) 1086
Eco31I GGTCTC 1 cut(s) 198
Eco47I GGWCC 1 cut(s) 1124
Eco57I CTGAAG 2 cut(s) 369, 1185
Eco91I GGTNACC 1 cut(s) 394
EcoO65I GGTNACC 1 cut(s) 394
EcoRI GAATTC 1 cut(s) 930
EcoRII CCWGG 2 cut(s) 595, 978
EcoT14I CCWWGG 1 cut(s) 1086
ErhI CCWWGG 1 cut(s) 1086
FaeI CATG 5 cut(s) 379, 773, 779, 797, 1090
FatI CATG 5 cut(s) 375, 769, 775, 793, 1086
FbaI TGATCA 1 cut(s) 1237
Fnu4HI GCNGC 8 cut(s) 17, 297, 318, 461, 510, 726, 1041, 1109
FokI GGATG 5 cut(s) 414, 458, 509, 824, 1059
Fsp4HI GCNGC 8 cut(s) 17, 297, 318, 461, 510, 726, 1041, 1109
FspBI CTAG 2 cut(s) 698, 1270
FspI TGCGCA 1 cut(s) 872
GlaI GCGC 1 cut(s) 872
GluI GCNGC 8 cut(s) 17, 297, 318, 461, 510, 726, 1041, 1109
GsaI CCCAGC 1 cut(s) 865
GsuI CTGGAG 2 cut(s) 180, 852
HaeIII GGCC 5 cut(s) 91, 645, 837, 957, 978
HapII CCGG 2 cut(s) 392, 838
HgaI GACGC 2 cut(s) 8, 172
HhaI GCGC 1 cut(s) 873
Hin1I GRCGYC 1 cut(s) 183
Hin1II CATG 5 cut(s) 379, 773, 779, 797, 1090
Hin6I GCGC 1 cut(s) 871
HinP1I GCGC 1 cut(s) 871
HincII GTYRAC 2 cut(s) 280, 1222
HindII GTYRAC 2 cut(s) 280, 1222
HinfI GANTC 3 cut(s) 97, 308, 344
HpaI GTTAAC 2 cut(s) 280, 1222
HpaII CCGG 2 cut(s) 392, 838
HphI GGTGA 2 cut(s) 1172, 1244
Hpy166II GTNNAC 3 cut(s) 280, 892, 1222
Hpy188I TCNGA 4 cut(s) 149, 226, 388, 913
Hpy188III TCNNGA 4 cut(s) 197, 422, 776, 1127
Hpy8I GTNNAC 3 cut(s) 280, 892, 1222
Hpy99I CGWCG 1 cut(s) 24
HpyAV CCTTC 3 cut(s) 635, 773, 835
HpyCH4III ACNGT 6 cut(s) 326, 615, 625, 986, 1172, 1232
HpyCH4IV ACGT 2 cut(s) 466, 473
HpyCH4V TGCA 9 cut(s) 320, 410, 471, 665, 728, 769, 1043, 1150, 1258
HpyF10VI GCNNNNNNNGC 2 cut(s) 92, 488
HpySE526I ACGT 2 cut(s) 466, 473
Hsp92I GRCGYC 1 cut(s) 183
Hsp92II CATG 5 cut(s) 379, 773, 779, 797, 1090
HspAI GCGC 1 cut(s) 871
KpnI GGTACC 1 cut(s) 370
Ksp22I TGATCA 1 cut(s) 1237
KspAI GTTAAC 2 cut(s) 280, 1222
Kzo9I GATC 4 cut(s) 844, 1003, 1237, 1264
LguI GCTCTTC 1 cut(s) 6
LmnI GCTCC 1 cut(s) 73
Lsp1109I GCAGC 8 cut(s) 28, 283, 304, 472, 496, 712, 1027, 1120
LweI GCATC 2 cut(s) 436, 478
MaeI CTAG 2 cut(s) 698, 1270
MaeII ACGT 2 cut(s) 466, 473
MaeIII GTNAC 2 cut(s) 394, 422
MalI GATC 4 cut(s) 846, 1005, 1239, 1266
MboI GATC 4 cut(s) 844, 1003, 1237, 1264
MfeI CAATTG 1 cut(s) 519
MflI RGATCY 2 cut(s) 844, 1264
MlsI TGGCCA 1 cut(s) 978
MluCI AATT 6 cut(s) 54, 432, 519, 817, 930, 1145
MluI ACGCGT 1 cut(s) 282
MluNI TGGCCA 1 cut(s) 978
MlyI GAGTC 1 cut(s) 353
MmeI TCCRAC 1 cut(s) 704
MnlI CCTC 5 cut(s) 123, 220, 331, 827, 1135
Mox20I TGGCCA 1 cut(s) 978
MscI TGGCCA 1 cut(s) 978
MseI TTAA 5 cut(s) 279, 528, 1056, 1154, 1221
MslI CAYNNNNRTG 4 cut(s) 774, 780, 999, 1155
Msp20I TGGCCA 1 cut(s) 978
MspA1I CMGCKG 2 cut(s) 509, 725
MspI CCGG 2 cut(s) 392, 838
MspR9I CCNGG 3 cut(s) 392, 597, 980
MunI CAATTG 1 cut(s) 519
Mva1269I GAATGC 1 cut(s) 699
MvaI CCWGG 2 cut(s) 597, 980
MvnI CGCG 1 cut(s) 284
MwoI GCNNNNNNNGC 2 cut(s) 92, 488
NciI CCSGG 1 cut(s) 392
NcoI CCATGG 1 cut(s) 1086
NdeII GATC 4 cut(s) 844, 1003, 1237, 1264
NheI GCTAGC 1 cut(s) 697
NlaIII CATG 5 cut(s) 379, 773, 779, 797, 1090
NlaIV GGNNCC 2 cut(s) 368, 846
NmuCI GTSAC 1 cut(s) 422
NsbI TGCGCA 1 cut(s) 872
NspI RCATGY 1 cut(s) 379
PagI TCATGA 1 cut(s) 775
PciI ACATGT 1 cut(s) 375
PciSI GCTCTTC 1 cut(s) 6
PctI GAATGC 1 cut(s) 699
PfeI GAWTC 2 cut(s) 97, 308
PflMI CCANNNNNTGG 1 cut(s) 263
PkrI GCNGC 8 cut(s) 18, 298, 319, 462, 511, 727, 1042, 1110
PleI GAGTC 1 cut(s) 352
PpsI GAGTC 1 cut(s) 352
Ppu21I YACGTR 1 cut(s) 474
PscI ACATGT 1 cut(s) 375
Psp6I CCWGG 2 cut(s) 595, 978
PspEI GGTNACC 1 cut(s) 394
PspFI CCCAGC 1 cut(s) 861
PspGI CCWGG 2 cut(s) 595, 978
PspN4I GGNNCC 2 cut(s) 368, 846
PspPI GGNCC 1 cut(s) 1124
PsuI RGATCY 2 cut(s) 844, 1264
PvuII CAGCTG 2 cut(s) 509, 725
RsaI GTAC 4 cut(s) 368, 374, 893, 970
RsaNI GTAC 4 cut(s) 367, 373, 892, 969
RseI CAYNNNNRTG 4 cut(s) 774, 780, 999, 1155
SapI GCTCTTC 1 cut(s) 6
SaqAI TTAA 5 cut(s) 279, 528, 1056, 1154, 1221
SatI GCNGC 8 cut(s) 17, 297, 318, 461, 510, 726, 1041, 1109
Sau3AI GATC 4 cut(s) 844, 1003, 1237, 1264
Sau96I GGNCC 1 cut(s) 1124
SchI GAGTC 1 cut(s) 353
ScrFI CCNGG 3 cut(s) 392, 597, 980
SfaNI GCATC 2 cut(s) 436, 478
SfcI CTRYAG 3 cut(s) 291, 702, 879
SinI GGWCC 1 cut(s) 1124
SmiMI CAYNNNNRTG 4 cut(s) 774, 780, 999, 1155
SmlI CTYRAG 1 cut(s) 176
SmoI CTYRAG 1 cut(s) 176
Sse9I AATT 6 cut(s) 54, 432, 519, 817, 930, 1145
SspMI CTAG 2 cut(s) 698, 1270
StyD4I CCNGG 3 cut(s) 390, 595, 978
StyI CCWWGG 1 cut(s) 1086
TaaI ACNGT 6 cut(s) 326, 615, 625, 986, 1172, 1232
TaiI ACGT 2 cut(s) 469, 476
TaqI TCGA 1 cut(s) 105
TasI AATT 6 cut(s) 54, 432, 519, 817, 930, 1145
TatI WGTACW 2 cut(s) 891, 968
TfiI GAWTC 2 cut(s) 97, 308
Tru1I TTAA 5 cut(s) 279, 528, 1056, 1154, 1221
Tru9I TTAA 5 cut(s) 279, 528, 1056, 1154, 1221
TscAI CASTG 4 cut(s) 331, 406, 541, 1209
TseFI GTSAC 1 cut(s) 422
TseI GCWGC 8 cut(s) 16, 296, 317, 460, 509, 725, 1040, 1108
Tsp45I GTSAC 1 cut(s) 422
TspDTI ATGAA 6 cut(s) 318, 425, 513, 792, 983, 1061
TspGWI ACGGA 2 cut(s) 86, 337
TspRI CASTG 4 cut(s) 331, 406, 541, 1209
Van91I CCANNNNNTGG 1 cut(s) 263
VpaK11BI GGWCC 1 cut(s) 1124
XapI RAATTY 1 cut(s) 930
XceI RCATGY 1 cut(s) 379
XcmI CCANNNNNNNNNTGG 1 cut(s) 438
XspI CTAG 2 cut(s) 698, 1270
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.