Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0007972

Physical Location & Seq

Genomic Coordinates Reverse (-)

5079219 .. 5082899

Gene Structure 3681 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G004900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1296 bp

ATGGGAGAAGAAGAAGAAGAAGAGCAGCAACACCTATCCAATTCGCCCAACCCAGATACGGAAATTACCGAAAACCCAAGGCAGCAGCAAGAAGAAGAGTACTCGTCAGCATGGCCGGCGTTTCGGTTCGACGTTCCTCCACAGAGAACCTACCACTTCTCCCGCCAGTTCAGAACTCCCTCAAACCCTAACAATTTTCTCAAGGCCGTCAAATGGTCGCCGGATGGTTCTTGCTTTCTCACCAGCTCTGAGGACAACACCCTCCGTGTTTTCGCAATACCGGAAAGTGGGAATGAATATGTTAACGGCTATTCTGCGCCCGCTGATGAAGACTCCTATGCTGCAAGCCTTGTTATCAATGAGGGAGAGTCGGTATATGACTATTGTTGGTACCCTTACATGTCTGCTTCAGACCCAGTTACCTGTGTTTTCGCAAGTACAGCTCGTGATCATCCGATTCATCTTTGGGATGCTTCTTCTGGTCAGCTACGTTGCACGTACCGTGCTTATGATGCTGTGGATGAAATCACTGCTGCTTTTTCAATTGCCTTTAATCCCAGTGGAACAAAGATTTTTGCTGGATACAACAAACTAGTCAGGGTGTTTGATTTACATCGCCCTGGTAGAGATTACAACCAGTATTCGACTGTTCAAGGAAATAAAGAAGGCCAAACAGGTATAATGTCTGCAATGGCTTTTTCTCCAACCCATAATGGAATGCTAGCTATAGGCTCTTACAGCAAGACTACTGCAATATATAGAGAAGATAATATGGAACTTTTATATGTATTACATGGACATGAAGGTGGGATTACACATGTCCAGTTCTCAAAGGATGGAAATTACTTGTATACTGGAGGTCGGAAGGATCCTTATATACTATGCTGGGATATACGCAAATCTGTTGATGTTGTCTACAAGTTATATAGGTCTGCAGAACATACCAACCAGCGGATTCTGTTTGATATTGAGCCACTTGGCCGCCATCTTTGTACAGGTGGTCAGGATGGTTTTGTTCATATATATGATCTTCAAACTGGACAATGGGTGTCAGGCTTCCAGGCTGCATTGGATACTGTTAATGGATTCTCTTTTCATCCCTTTCTGCCAATGGCTACAACTTCTTCGGGCCACCGAAGATTTCTTCCTCCTGATGATGGGATTGACGAATTGCATTTGAGTGGTCATGAAAACTGTGCTTCTGTGTGGAGTTTCTCTGTTGCTTCAATGGAAGAGAACGTTGTTGAAATTAATGGCAATGATCACAACAGCCAGAACCGGCTCCAGAATCTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005697 GO:0006996 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010556 GO:0010557 GO:0010604 GO:0015030 GO:0016043 GO:0016604 GO:0019219 GO:0019222 GO:0022607 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0032200 GO:0032202 GO:0032203 GO:0032991 GO:0043085 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044085 GO:0044093 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0051052 GO:0051054 GO:0051171 GO:0051173 GO:0051276 GO:0051338 GO:0051347 GO:0051972 GO:0051973 GO:0060255 GO:0065007 GO:0065009 GO:0070013 GO:0071840 GO:0080090 GO:0097159 GO:1901363 GO:1990904 GO:2000112 GO:2000278 GO:2000573

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WD40

Protein Analysis

431

Amino Acids

48.6

Weight (kDa)

4.98

Isoelectric Point (pI)

47.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_THOC3	PF25174	67 - 301	6.8e-20	THOC3 beta-propeller domain
Beta-prop_WDR5	PF25175	69 - 205	7.7e-06	WDR5 beta-propeller domain
Beta-prop_EML_2	PF23414	137 - 301	2.9e-13	Echinoderm microtubule-associated protein second beta-propeller
EIF3I	PF24805	140 - 298	7.9e-06	EIF3I
WD40_Prp19	PF24814	142 - 369	1.8e-15	Prp19 WD40 domain
Beta-prop_EML	PF23409	144 - 298	2e-06	Echinoderm microtubule-associated protein first beta-propeller
WD40_WDHD1_1st	PF24817	147 - 304	2.4e-08	WDHD1 first WD40 domain
WD40_CDC20-Fz	PF24807	150 - 315	5.6e-08	CDC20/Fizzy WD40 domain
Beta-prop_WDR3_1st	PF25173	212 - 368	1.3e-14	WDR3 first beta-propeller domain
Beta-prop_WDR5	PF25175	223 - 376	9.1e-17	WDR5 beta-propeller domain
WD40_CDC20-Fz	PF24807	224 - 370	1.2e-10	CDC20/Fizzy WD40 domain
WDR55	PF24796	229 - 365	4.8e-09	WDR55
Beta-prop_TEP1_2nd	PF25047	241 - 356	5e-10	TEP-1 second beta-propeller
WD40	PF00400	259 - 297	6.3e-07	WD domain, G-beta repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0007972)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G21520 AT4G21520
fragaria_vesca	FvH4_3g04030 FvH4_3g04030 FvH4_3g04030 FvH4_3g04030 FvH4_3g04030 FvH4_3g04030
malus_domestica	MD05G1325300.v1.1 MD10G1303200.v1.1
prunus_persica	Prupe.4G036600_v2.0.a1
pyrus_communis	pycom05g29930 pycom10g25570
rosa_chinensis	RchiOBHm_Chr5g0006371
rosa_laevigata	RLG00000031362
rosa_multiflora	Rmu_sc0037704.1_g000001
rosa_roxburghii	Rroxscaffold_1G00069560
rosa_rugosa	Rorug04G0421200 Rorug04G0421200
rosa_samantha	Rh5AG049200 Rh5BG048500 Rh5CG056700 Rh5DG047800
rosa_wichuraiana	Rw5G004900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	390
AccB1I	GGYRCC	1 cut(s)	390
AccI	GTMKAC	2 cut(s)	851, 915
AciI	CCGC	4 cut(s)	163, 321, 952, 982
AclI	AACGTT	1 cut(s)	1239
AclWI	GGATC	2 cut(s)	863, 876
AcoI	YGGCCR	2 cut(s)	113, 979
AcuI	CTGAAG	1 cut(s)	393
AfaI	GTAC	5 cut(s)	101, 392, 439, 500, 994
AfiI	CCNNNNNNNGG	5 cut(s)	58, 213, 287, 951, 1157
AflIII	ACRYGT	2 cut(s)	399, 817
AgsI	TTSAA	5 cut(s)	543, 653, 1034, 1227, 1247
AhlI	ACTAGT	1 cut(s)	592
AjnI	CCWGG	2 cut(s)	619, 1059
AluBI	AGCT	4 cut(s)	246, 443, 487, 725
AluI	AGCT	4 cut(s)	246, 443, 487, 725
AlwI	GGATC	2 cut(s)	863, 876
AlwNI	CAGNNNCTG	1 cut(s)	1291
AoxI	GGCC	5 cut(s)	113, 204, 667, 979, 1129
ApeKI	GCWGC	6 cut(s)	25, 82, 85, 341, 533, 1064
AseI	ATTAAT	1 cut(s)	1251
Asp718I	GGTACC	1 cut(s)	390
AspLEI	GCGC	1 cut(s)	319
AspS9I	GGNCC	1 cut(s)	1129
AsuHPI	GGTGA	1 cut(s)	232
AsuNHI	GCTAGC	1 cut(s)	721
BamHI	GGATCC	1 cut(s)	868
BanI	GGYRCC	1 cut(s)	390
BauI	CACGAG	1 cut(s)	444
BbsI	GAAGAC	1 cut(s)	336
BbvI	GCAGC	6 cut(s)	37, 94, 97, 328, 520, 1051
BccI	CCATC	5 cut(s)	218, 830, 993, 1001, 1151
BceAI	ACGGC	2 cut(s)	191, 322
BciT130I	CCWGG	2 cut(s)	621, 1061
BciVI	GTATCC	2 cut(s)	575, 1066
BclI	TGATCA	2 cut(s)	448, 1261
BcuI	ACTAGT	1 cut(s)	592
BfaI	CTAG	2 cut(s)	593, 722
BfmI	CTRYAG	3 cut(s)	726, 933, 1292
BfuI	GTATCC	2 cut(s)	575, 1066
BisI	GCNGC	7 cut(s)	26, 83, 86, 342, 534, 982, 1065
BlsI	GCNGC	7 cut(s)	27, 84, 87, 343, 535, 983, 1066
BmcAI	AGTACT	1 cut(s)	101
Bme1390I	CCNGG	2 cut(s)	621, 1061
BmgT120I	GGNCC	1 cut(s)	1129
BmiI	GGNNCC	3 cut(s)	392, 870, 1283
BmrFI	CCNGG	2 cut(s)	621, 1061
BmrI	ACTGGG	2 cut(s)	410, 552
BmsI	GCATC	2 cut(s)	460, 502
BmtI	GCTAGC	1 cut(s)	725
BmuI	ACTGGG	2 cut(s)	410, 552
BpiI	GAAGAC	1 cut(s)	336
BpmI	CTGGAG	2 cut(s)	876, 1268
BpuEI	CTTGAG	1 cut(s)	185
BsaAI	YACGTR	1 cut(s)	498
BsaBI	GATNNNNATC	1 cut(s)	612
BsaJI	CCNNGG	2 cut(s)	77, 619
BsaWI	WCCGGW	1 cut(s)	280
BsaXI	ACNNNNNCTCC	4 cut(s)	143, 173, 357, 387
Bsc4I	CCNNNNNNNGG	5 cut(s)	58, 213, 287, 951, 1157
Bse118I	RCCGGY	2 cut(s)	115, 1278
Bse1I	ACTGG	7 cut(s)	166, 416, 558, 637, 823, 859, 1042
Bse3DI	GCAATG	2 cut(s)	696, 1264
Bse8I	GATNNNNATC	1 cut(s)	612
BseBI	CCWGG	2 cut(s)	621, 1061
BseDI	CCNNGG	2 cut(s)	77, 619
BseGI	GGATG	7 cut(s)	229, 451, 475, 526, 841, 1012, 1096
BseJI	GATNNNNATC	1 cut(s)	612
BseLI	CCNNNNNNNGG	5 cut(s)	58, 213, 287, 951, 1157
BseMI	GCAATG	2 cut(s)	696, 1264
BseMII	CTCAG	1 cut(s)	240
BseNI	ACTGG	7 cut(s)	166, 416, 558, 637, 823, 859, 1042
BseXI	GCAGC	6 cut(s)	37, 94, 97, 328, 520, 1051
BseYI	CCCAGC	1 cut(s)	885
BshFI	GGCC	5 cut(s)	115, 206, 669, 981, 1131
BshNI	GGYRCC	1 cut(s)	390
BsiSI	CCGG	4 cut(s)	116, 221, 281, 1279
BslI	CCNNNNNNNGG	5 cut(s)	58, 213, 287, 951, 1157
BsmI	GAATGC	1 cut(s)	723
BsnI	GGCC	5 cut(s)	115, 206, 669, 981, 1131
Bsp1407I	TGTACA	1 cut(s)	992
Bsp143I	GATC	4 cut(s)	448, 868, 1027, 1261
BspACI	CCGC	4 cut(s)	163, 321, 952, 982
BspANI	GGCC	5 cut(s)	115, 206, 669, 981, 1131
BspCNI	CTCAG	1 cut(s)	241
BspHI	TCATGA	1 cut(s)	1186
BspLI	GGNNCC	3 cut(s)	392, 870, 1283
BspMAI	CTGCAG	1 cut(s)	937
BspOI	GCTAGC	1 cut(s)	725
BspPI	GGATC	2 cut(s)	863, 876
BspQI	GCTCTTC	1 cut(s)	15
BspT107I	GGYRCC	1 cut(s)	390
BsrDI	GCAATG	2 cut(s)	696, 1264
BsrFI	RCCGGY	2 cut(s)	115, 1278
BsrGI	TGTACA	1 cut(s)	992
BsrI	ACTGG	7 cut(s)	166, 416, 558, 637, 823, 859, 1042
BssAI	RCCGGY	2 cut(s)	115, 1278
BssECI	CCNNGG	2 cut(s)	77, 619
BssMI	GATC	4 cut(s)	448, 868, 1027, 1261
BssNAI	GTATAC	1 cut(s)	852
BssSI	CACGAG	1 cut(s)	444
BssT1I	CCWWGG	1 cut(s)	77
Bst1107I	GTATAC	1 cut(s)	852
Bst2BI	CACGAG	1 cut(s)	444
Bst2UI	CCWGG	2 cut(s)	621, 1061
Bst4CI	ACNGT	4 cut(s)	503, 649, 1078, 1196
Bst6I	CTCTTC	3 cut(s)	15, 90, 1227
BstAUI	TGTACA	1 cut(s)	992
BstBAI	YACGTR	1 cut(s)	498
BstC8I	GCNNGC	4 cut(s)	117, 321, 346, 723
BstDEI	CTNAG	1 cut(s)	249
BstF5I	GGATG	7 cut(s)	229, 451, 475, 526, 841, 1012, 1096
BstHHI	GCGC	1 cut(s)	319
BstKTI	GATC	4 cut(s)	451, 871, 1030, 1264
BstMBI	GATC	4 cut(s)	448, 868, 1027, 1261
BstMWI	GCNNNNNNNGC	4 cut(s)	116, 440, 512, 738
BstNI	CCWGG	2 cut(s)	621, 1061
BstNSI	RCATGY	2 cut(s)	403, 821
BstSCI	CCNGG	2 cut(s)	619, 1059
BstSFI	CTRYAG	3 cut(s)	726, 933, 1292
BstV1I	GCAGC	6 cut(s)	37, 94, 97, 328, 520, 1051
BstV2I	GAAGAC	1 cut(s)	336
BstX2I	RGATCY	1 cut(s)	868
BstYI	RGATCY	1 cut(s)	868
BstZ17I	GTATAC	1 cut(s)	852
BsuI	GTATCC	2 cut(s)	575, 1066
BsuRI	GGCC	5 cut(s)	115, 206, 669, 981, 1131
BtgZI	GCGATG	1 cut(s)	599
BtsCI	GGATG	7 cut(s)	229, 451, 475, 526, 841, 1012, 1096
BtsI	GCAGTG	1 cut(s)	528
BtsIMutI	CAGTG	2 cut(s)	528, 565
Cac8I	GCNNGC	4 cut(s)	117, 321, 346, 723
CaiI	CAGNNNCTG	1 cut(s)	1291
CciI	TCATGA	1 cut(s)	1186
CfoI	GCGC	1 cut(s)	319
Cfr10I	RCCGGY	2 cut(s)	115, 1278
Cfr13I	GGNCC	1 cut(s)	1129
Csp6I	GTAC	5 cut(s)	100, 391, 438, 499, 993
CviAII	CATG	6 cut(s)	111, 400, 794, 800, 818, 1187
CviQI	GTAC	5 cut(s)	100, 391, 438, 499, 993
DdeI	CTNAG	1 cut(s)	249
DpnI	GATC	4 cut(s)	450, 870, 1029, 1263
DpnII	GATC	4 cut(s)	448, 868, 1027, 1261
EaeI	YGGCCR	2 cut(s)	113, 979
Eam1104I	CTCTTC	3 cut(s)	15, 90, 1227
EarI	CTCTTC	3 cut(s)	15, 90, 1227
Eco130I	CCWWGG	1 cut(s)	77
Eco57I	CTGAAG	1 cut(s)	393
EcoRII	CCWGG	2 cut(s)	619, 1059
EcoT14I	CCWWGG	1 cut(s)	77
ErhI	CCWWGG	1 cut(s)	77
FaeI	CATG	6 cut(s)	114, 403, 797, 803, 821, 1190
FatI	CATG	6 cut(s)	110, 399, 793, 799, 817, 1186
FauI	CCCGC	2 cut(s)	170, 328
FbaI	TGATCA	2 cut(s)	448, 1261
FblI	GTMKAC	2 cut(s)	851, 915
Fnu4HI	GCNGC	7 cut(s)	26, 83, 86, 342, 534, 982, 1065
FokI	GGATG	7 cut(s)	236, 438, 482, 533, 848, 1019, 1083
Fsp4HI	GCNGC	7 cut(s)	26, 83, 86, 342, 534, 982, 1065
FspBI	CTAG	2 cut(s)	593, 722
GlaI	GCGC	1 cut(s)	318
GluI	GCNGC	7 cut(s)	26, 83, 86, 342, 534, 982, 1065
GsaI	CCCAGC	1 cut(s)	889
GsuI	CTGGAG	2 cut(s)	876, 1268
HaeIII	GGCC	5 cut(s)	115, 206, 669, 981, 1131
HapII	CCGG	4 cut(s)	116, 221, 281, 1279
HhaI	GCGC	1 cut(s)	319
Hin1II	CATG	6 cut(s)	114, 403, 797, 803, 821, 1190
Hin6I	GCGC	1 cut(s)	317
HinP1I	GCGC	1 cut(s)	317
HincII	GTYRAC	1 cut(s)	304
HindII	GTYRAC	1 cut(s)	304
HinfI	GANTC	6 cut(s)	332, 368, 457, 955, 1086, 1288
HpaI	GTTAAC	1 cut(s)	304
HpaII	CCGG	4 cut(s)	116, 221, 281, 1279
HphI	GGTGA	1 cut(s)	232
Hpy166II	GTNNAC	3 cut(s)	304, 852, 916
Hpy188I	TCNGA	5 cut(s)	173, 250, 412, 456, 864
Hpy188III	TCNNGA	5 cut(s)	446, 1004, 1151, 1187, 1285
Hpy8I	GTNNAC	3 cut(s)	304, 852, 916
Hpy99I	CGWCG	1 cut(s)	134
HpyAV	CCTTC	3 cut(s)	659, 797, 859
HpyCH4III	ACNGT	4 cut(s)	503, 649, 1078, 1196
HpyCH4IV	ACGT	4 cut(s)	132, 490, 497, 1239
HpyCH4V	TGCA	7 cut(s)	344, 495, 689, 752, 935, 1067, 1174
HpyF10VI	GCNNNNNNNGC	4 cut(s)	116, 440, 512, 738
HpyF3I	CTNAG	1 cut(s)	249
HpySE526I	ACGT	4 cut(s)	132, 490, 497, 1239
Hsp92II	CATG	6 cut(s)	114, 403, 797, 803, 821, 1190
HspAI	GCGC	1 cut(s)	317
KpnI	GGTACC	1 cut(s)	394
KroI	GCCGGC	1 cut(s)	115
KroNI	GCCGGC	1 cut(s)	117
Ksp22I	TGATCA	2 cut(s)	448, 1261
KspAI	GTTAAC	1 cut(s)	304
Kzo9I	GATC	4 cut(s)	448, 868, 1027, 1261
LguI	GCTCTTC	1 cut(s)	15
LmnI	GCTCC	1 cut(s)	1287
Lsp1109I	GCAGC	6 cut(s)	37, 94, 97, 328, 520, 1051
LweI	GCATC	2 cut(s)	460, 502
MaeI	CTAG	2 cut(s)	593, 722
MaeII	ACGT	4 cut(s)	132, 490, 497, 1239
MaeIII	GTNAC	1 cut(s)	418
MalI	GATC	4 cut(s)	450, 870, 1029, 1263
MboI	GATC	4 cut(s)	448, 868, 1027, 1261
MfeI	CAATTG	1 cut(s)	543
MflI	RGATCY	1 cut(s)	868
MluCI	AATT	7 cut(s)	40, 63, 193, 543, 841, 1169, 1248
MlyI	GAGTC	2 cut(s)	326, 377
MmeI	TCCRAC	2 cut(s)	728, 842
MnlI	CCTC	7 cut(s)	147, 190, 244, 272, 355, 851, 1158
MroNI	GCCGGC	1 cut(s)	115
MseI	TTAA	4 cut(s)	303, 552, 1080, 1251
MslI	CAYNNNNRTG	4 cut(s)	798, 804, 1023, 1179
MspA1I	CMGCKG	2 cut(s)	323, 952
MspI	CCGG	4 cut(s)	116, 221, 281, 1279
MspR9I	CCNGG	2 cut(s)	621, 1061
MunI	CAATTG	1 cut(s)	543
Mva1269I	GAATGC	1 cut(s)	723
MvaI	CCWGG	2 cut(s)	621, 1061
MwoI	GCNNNNNNNGC	4 cut(s)	116, 440, 512, 738
NaeI	GCCGGC	1 cut(s)	117
NdeII	GATC	4 cut(s)	448, 868, 1027, 1261
NgoMIV	GCCGGC	1 cut(s)	115
NheI	GCTAGC	1 cut(s)	721
NlaIII	CATG	6 cut(s)	114, 403, 797, 803, 821, 1190
NlaIV	GGNNCC	3 cut(s)	392, 870, 1283
NspI	RCATGY	2 cut(s)	403, 821
PagI	TCATGA	1 cut(s)	1186
PciI	ACATGT	2 cut(s)	399, 817
PciSI	GCTCTTC	1 cut(s)	15
PctI	GAATGC	1 cut(s)	723
PdiI	GCCGGC	1 cut(s)	117
PfeI	GAWTC	4 cut(s)	457, 955, 1086, 1288
PkrI	GCNGC	7 cut(s)	27, 84, 87, 343, 535, 983, 1066
PleI	GAGTC	2 cut(s)	326, 376
PpsI	GAGTC	2 cut(s)	326, 376
Ppu21I	YACGTR	1 cut(s)	498
PscI	ACATGT	2 cut(s)	399, 817
PshBI	ATTAAT	1 cut(s)	1251
Psp1406I	AACGTT	1 cut(s)	1239
Psp6I	CCWGG	2 cut(s)	619, 1059
PspFI	CCCAGC	1 cut(s)	885
PspGI	CCWGG	2 cut(s)	619, 1059
PspN4I	GGNNCC	3 cut(s)	392, 870, 1283
PspPI	GGNCC	1 cut(s)	1129
PstI	CTGCAG	1 cut(s)	937
PstNI	CAGNNNCTG	1 cut(s)	1291
PsuI	RGATCY	1 cut(s)	868
RsaI	GTAC	5 cut(s)	101, 392, 439, 500, 994
RsaNI	GTAC	5 cut(s)	100, 391, 438, 499, 993
RseI	CAYNNNNRTG	4 cut(s)	798, 804, 1023, 1179
SapI	GCTCTTC	1 cut(s)	15
SaqAI	TTAA	4 cut(s)	303, 552, 1080, 1251
SatI	GCNGC	7 cut(s)	26, 83, 86, 342, 534, 982, 1065
Sau3AI	GATC	4 cut(s)	448, 868, 1027, 1261
Sau96I	GGNCC	1 cut(s)	1129
ScaI	AGTACT	1 cut(s)	101
SchI	GAGTC	2 cut(s)	326, 377
ScrFI	CCNGG	2 cut(s)	621, 1061
SfaNI	GCATC	2 cut(s)	460, 502
SfcI	CTRYAG	3 cut(s)	726, 933, 1292
SmiMI	CAYNNNNRTG	4 cut(s)	798, 804, 1023, 1179
SmlI	CTYRAG	1 cut(s)	200
SmoI	CTYRAG	1 cut(s)	200
SpeI	ACTAGT	1 cut(s)	592
Sse9I	AATT	7 cut(s)	40, 63, 193, 543, 841, 1169, 1248
SsiI	CCGC	4 cut(s)	163, 321, 952, 982
SspMI	CTAG	2 cut(s)	593, 722
StyD4I	CCNGG	2 cut(s)	619, 1059
StyI	CCWWGG	1 cut(s)	77
TaaI	ACNGT	4 cut(s)	503, 649, 1078, 1196
TaiI	ACGT	4 cut(s)	135, 493, 500, 1242
TaqI	TCGA	2 cut(s)	129, 644
TasI	AATT	7 cut(s)	40, 63, 193, 543, 841, 1169, 1248
TatI	WGTACW	3 cut(s)	99, 437, 992
TauI	GCSGC	1 cut(s)	984
TfiI	GAWTC	4 cut(s)	457, 955, 1086, 1288
Tru1I	TTAA	4 cut(s)	303, 552, 1080, 1251
Tru9I	TTAA	4 cut(s)	303, 552, 1080, 1251
TscAI	CASTG	2 cut(s)	535, 565
TseI	GCWGC	6 cut(s)	25, 82, 85, 341, 533, 1064
TspDTI	ATGAA	8 cut(s)	309, 342, 449, 537, 816, 1007, 1085, 1203
TspGWI	ACGGA	2 cut(s)	74, 254
TspRI	CASTG	2 cut(s)	535, 565
VspI	ATTAAT	1 cut(s)	1251
XceI	RCATGY	2 cut(s)	403, 821
XmiI	GTMKAC	2 cut(s)	851, 915
XspI	CTAG	2 cut(s)	593, 722
ZrmI	AGTACT	1 cut(s)	101

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.