Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0015507

Physical Location & Seq

Genomic Coordinates Forward (+)

2141784 .. 2143956

Gene Structure 2173 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G044600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 999 bp

ATGGGAAGAGGGGGACAGGGAAGAGGGGGACATGGAGAGGCAGAAGAGGAGGGAGTGATGGCTACTGACTTTTTTTGGTCTTATACAGATGAGCCTCACGCTTCTAGGCGCCGTCAGATCCTCTCTCAGTACCCTCAGATAAAGGAGCTCTTTGGTCCTGACCCCTGGGCTTTCCTCAAGATTACAGTGGTTGTCTTGCTTCAGCTCTGGACTGCCACAGCCCTCCACAATGCAGGCTGGCTGAAGATACTGGCAATAGCCTACTTCTTTGGCTCTTTCCTCAACCACAACCTCTTCTTGGCCATCCATGAGCTCAGTCACAATCTCGCCTTCTCAACTCCAGTCTACAACCGTTGGCTCGGTATTTTTGCTAACCTCCCAATCGGTGTTCCCATGTCCGTCACCTTCCAAAAATATCACCTTGAGCACCACCGTTTTCAAGGAGTAGACGGAATTGATATGGACATCCCGAGCAAGGTTGAAGCCCATTTGGTGACAAATGTAGTCAACAAAGCCATATGGGTTCTCCTTCAACTCTTCTTCTATGCTTTTCGGCCTGTGTTTCTCAAACCAAAGCCCCCTGGTTGTTGGGAGTTCCTCAACCTTTTCATTCAGATAGCCCTTGATGTTTCCATGGTCTATTTTTGTGGGTGGAAATCTTTTGCTTATTTGATCCTCTCTACATTTGTTGGGGGTGGGATGCACCCAATGGCTGGTCACTTCATTTCAGAGCATTATGTCTTCAACCCTGATCAGGAGACATATTCTTACTATGGCCCTCTTAATCTCCTCACTTGGAGCGTGGGGTACCACAACGAGCACCATGATTTCCCCAGAATTCCTGGGAGCAAGCTCCATAAGGTGAAGGGCATTGCACCAGAATACTATGAGGGTTTGGAGTCATATAAATCTTGGAGCCAAGTCATCTACATGTACATAATGGATCGAACAGTCGGGCCGTTCAGTCGAATGAAGAGAAATCCATCAAAATCTGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006629 GO:0006643 GO:0006665 GO:0006672 GO:0006807 GO:0008150 GO:0008152 GO:0008610 GO:0009058 GO:0009987 GO:0016491 GO:0016705 GO:0030148 GO:0034641 GO:0042284 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044271 GO:0046467 GO:0046513 GO:0055114 GO:0071704 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00600 ko01100 ko04071 map00600 map01100 map04071

Pfam Domains

Protein Families

FA_desaturase Lipid_DES

Protein Analysis

333

Amino Acids

38.21

Weight (kDa)

7.32

Isoelectric Point (pI)

41.75

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015507)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G04930
fragaria_vesca	FvH4_3g04930
malus_domestica	MD10G1295900.v1.1
prunus_persica	Prupe.4G044600_v2.0.a1
pyrus_communis	pycom10g24850
rosa_chinensis	RchiOBHm_Chr5g0008091
rosa_laevigata	RLG00000031535
rosa_multiflora	Rmu_sc0017465.1_g000005 Rmu_sc0039673.1_g000001
rosa_roxburghii	Rroxscaffold_1G00068390
rosa_rugosa	Rorug04G0433300
rosa_samantha	Rh5AG061400 Rh5BG058200 Rh5CG068300 Rh5DG057500
rosa_wichuraiana	Rw5G005920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	807
AccB1I	GGYRCC	2 cut(s)	108, 807
AccB7I	CCANNNNNTGG	1 cut(s)	713
AccI	GTMKAC	2 cut(s)	345, 447
AclWI	GGATC	3 cut(s)	112, 667, 951
AcoI	YGGCCR	1 cut(s)	300
AcsI	RAATTY	1 cut(s)	837
AcuI	CTGAAG	2 cut(s)	185, 263
AcyI	GRCGYC	1 cut(s)	109
AfaI	GTAC	3 cut(s)	131, 809, 935
AfiI	CCNNNNNNNGG	4 cut(s)	298, 475, 713, 754
AflIII	ACRYGT	1 cut(s)	930
AgsI	TTSAA	4 cut(s)	440, 482, 533, 745
AjnI	CCWGG	3 cut(s)	164, 580, 841
AluBI	AGCT	4 cut(s)	148, 205, 313, 853
AluI	AGCT	4 cut(s)	148, 205, 313, 853
Alw21I	GWGCWC	4 cut(s)	150, 315, 429, 822
Alw26I	GTCTC	1 cut(s)	752
AlwI	GGATC	3 cut(s)	112, 667, 951
Ama87I	CYCGRG	1 cut(s)	469
AoxI	GGCC	4 cut(s)	300, 554, 775, 956
ApoI	RAATTY	1 cut(s)	837
Asp718I	GGTACC	1 cut(s)	807
AspLEI	GCGC	1 cut(s)	111
AspS9I	GGNCC	3 cut(s)	155, 776, 956
AsuHPI	GGTGA	4 cut(s)	394, 410, 505, 874
AvaI	CYCGRG	1 cut(s)	469
AvaII	GGWCC	1 cut(s)	155
BalI	TGGCCA	1 cut(s)	302
BanI	GGYRCC	2 cut(s)	108, 807
BanII	GRGCYC	2 cut(s)	150, 315
BbsI	GAAGAC	1 cut(s)	733
Bbv12I	GWGCWC	4 cut(s)	150, 315, 429, 822
BccI	CCATC	3 cut(s)	52, 311, 991
BceAI	ACGGC	2 cut(s)	96, 943
BciT130I	CCWGG	3 cut(s)	166, 582, 843
BclI	TGATCA	1 cut(s)	751
BcoDI	GTCTC	1 cut(s)	752
BfaI	CTAG	1 cut(s)	105
BfoI	RGCGCY	1 cut(s)	112
Bme1390I	CCNGG	3 cut(s)	166, 582, 843
Bme18I	GGWCC	1 cut(s)	155
BmeT110I	CYCGRG	1 cut(s)	469
BmgT120I	GGNCC	3 cut(s)	155, 776, 956
BmiI	GGNNCC	3 cut(s)	110, 809, 917
BmrFI	CCNGG	3 cut(s)	166, 582, 843
BmsI	GCATC	1 cut(s)	690
BpiI	GAAGAC	1 cut(s)	733
BpmI	CTGGAG	1 cut(s)	324
BpuEI	CTTGAG	2 cut(s)	161, 443
BsaHI	GRCGYC	1 cut(s)	109
BsaJI	CCNNGG	5 cut(s)	164, 165, 580, 633, 842
Bsc4I	CCNNNNNNNGG	4 cut(s)	298, 475, 713, 754
Bse1I	ACTGG	2 cut(s)	255, 341
Bse3DI	GCAATG	1 cut(s)	870
BseBI	CCWGG	3 cut(s)	166, 582, 843
BseDI	CCNNGG	5 cut(s)	164, 165, 580, 633, 842
BseGI	GGATG	3 cut(s)	303, 465, 705
BseLI	CCNNNNNNNGG	4 cut(s)	298, 475, 713, 754
BseMI	GCAATG	1 cut(s)	870
BseMII	CTCAG	3 cut(s)	140, 149, 328
BseNI	ACTGG	2 cut(s)	255, 341
BseRI	GAGGAG	2 cut(s)	62, 779
BshFI	GGCC	4 cut(s)	302, 556, 777, 958
BshNI	GGYRCC	2 cut(s)	108, 807
BsiHKAI	GWGCWC	4 cut(s)	150, 315, 429, 822
BsiHKCI	CYCGRG	1 cut(s)	469
BslFI	GGGAC	2 cut(s)	27, 42
BslI	CCNNNNNNNGG	4 cut(s)	298, 475, 713, 754
BsmAI	GTCTC	1 cut(s)	752
BsmFI	GGGAC	2 cut(s)	27, 42
BsnI	GGCC	4 cut(s)	302, 556, 777, 958
BsoBI	CYCGRG	1 cut(s)	469
Bsp1286I	GDGCHC	4 cut(s)	150, 315, 429, 822
Bsp1407I	TGTACA	1 cut(s)	933
Bsp143I	GATC	4 cut(s)	117, 672, 751, 943
Bsp19I	CCATGG	1 cut(s)	633
BspANI	GGCC	4 cut(s)	302, 556, 777, 958
BspCNI	CTCAG	3 cut(s)	139, 148, 327
BspLI	GGNNCC	3 cut(s)	110, 809, 917
BspPI	GGATC	3 cut(s)	112, 667, 951
BspT107I	GGYRCC	2 cut(s)	108, 807
BsrDI	GCAATG	1 cut(s)	870
BsrGI	TGTACA	1 cut(s)	933
BsrI	ACTGG	2 cut(s)	255, 341
BssECI	CCNNGG	5 cut(s)	164, 165, 580, 633, 842
BssMI	GATC	4 cut(s)	117, 672, 751, 943
BssNI	GRCGYC	1 cut(s)	109
BssT1I	CCWWGG	1 cut(s)	633
Bst2UI	CCWGG	3 cut(s)	166, 582, 843
Bst4CI	ACNGT	4 cut(s)	187, 353, 434, 952
Bst6I	CTCTTC	5 cut(s)	16, 39, 299, 542, 968
BstACI	GRCGYC	1 cut(s)	109
BstAUI	TGTACA	1 cut(s)	933
BstC8I	GCNNGC	3 cut(s)	235, 239, 851
BstDEI	CTNAG	3 cut(s)	126, 135, 314
BstDSI	CCRYGG	1 cut(s)	633
BstF5I	GGATG	3 cut(s)	303, 465, 705
BstH2I	RGCGCY	1 cut(s)	112
BstHHI	GCGC	1 cut(s)	111
BstKTI	GATC	4 cut(s)	120, 675, 754, 946
BstMAI	GTCTC	1 cut(s)	752
BstMBI	GATC	4 cut(s)	117, 672, 751, 943
BstNI	CCWGG	3 cut(s)	166, 582, 843
BstNSI	RCATGY	1 cut(s)	934
BstSCI	CCNGG	3 cut(s)	164, 580, 841
BstV2I	GAAGAC	1 cut(s)	733
BstX2I	RGATCY	1 cut(s)	117
BstYI	RGATCY	1 cut(s)	117
BsuRI	GGCC	4 cut(s)	302, 556, 777, 958
BtgI	CCRYGG	1 cut(s)	633
BtsCI	GGATG	3 cut(s)	303, 465, 705
BtsIMutI	CAGTG	1 cut(s)	192
Cac8I	GCNNGC	3 cut(s)	235, 239, 851
CfoI	GCGC	1 cut(s)	111
Cfr13I	GGNCC	3 cut(s)	155, 776, 956
Csp6I	GTAC	3 cut(s)	130, 808, 934
CviAII	CATG	6 cut(s)	32, 308, 394, 634, 824, 931
CviQI	GTAC	3 cut(s)	130, 808, 934
DdeI	CTNAG	3 cut(s)	126, 135, 314
DinI	GGCGCC	1 cut(s)	110
DpnI	GATC	4 cut(s)	119, 674, 753, 945
DpnII	GATC	4 cut(s)	117, 672, 751, 943
EaeI	YGGCCR	1 cut(s)	300
Eam1104I	CTCTTC	5 cut(s)	16, 39, 299, 542, 968
EarI	CTCTTC	5 cut(s)	16, 39, 299, 542, 968
Ecl136II	GAGCTC	2 cut(s)	148, 313
Eco130I	CCWWGG	1 cut(s)	633
Eco24I	GRGCYC	2 cut(s)	150, 315
Eco47I	GGWCC	1 cut(s)	155
Eco53kI	GAGCTC	2 cut(s)	148, 313
Eco57I	CTGAAG	2 cut(s)	185, 263
Eco88I	CYCGRG	1 cut(s)	469
EcoICRI	GAGCTC	2 cut(s)	148, 313
EcoRI	GAATTC	1 cut(s)	837
EcoRII	CCWGG	3 cut(s)	164, 580, 841
EcoT14I	CCWWGG	1 cut(s)	633
EcoT38I	GRGCYC	2 cut(s)	150, 315
EgeI	GGCGCC	1 cut(s)	110
EheI	GGCGCC	1 cut(s)	110
ErhI	CCWWGG	1 cut(s)	633
FaeI	CATG	6 cut(s)	35, 311, 397, 637, 827, 934
FalI	AAGNNNNNCTT	2 cut(s)	134, 166
FaqI	GGGAC	2 cut(s)	27, 42
FatI	CATG	6 cut(s)	31, 307, 393, 633, 823, 930
FauNDI	CATATG	1 cut(s)	518
FbaI	TGATCA	1 cut(s)	751
FblI	GTMKAC	2 cut(s)	345, 447
FokI	GGATG	3 cut(s)	290, 452, 712
FriOI	GRGCYC	2 cut(s)	150, 315
FspBI	CTAG	1 cut(s)	105
GlaI	GCGC	1 cut(s)	110
GsuI	CTGGAG	1 cut(s)	324
HaeII	RGCGCY	1 cut(s)	112
HaeIII	GGCC	4 cut(s)	302, 556, 777, 958
HhaI	GCGC	1 cut(s)	111
Hin1I	GRCGYC	1 cut(s)	109
Hin1II	CATG	6 cut(s)	35, 311, 397, 637, 827, 934
Hin6I	GCGC	1 cut(s)	109
HinP1I	GCGC	1 cut(s)	109
HincII	GTYRAC	1 cut(s)	508
HindII	GTYRAC	1 cut(s)	508
HinfI	GANTC	1 cut(s)	899
HphI	GGTGA	4 cut(s)	394, 410, 505, 874
Hpy166II	GTNNAC	3 cut(s)	346, 448, 508
Hpy188I	TCNGA	5 cut(s)	117, 138, 615, 730, 994
Hpy188III	TCNNGA	5 cut(s)	158, 178, 208, 469, 755
Hpy8I	GTNNAC	3 cut(s)	346, 448, 508
HpyAV	CCTTC	4 cut(s)	340, 415, 539, 859
HpyCH4III	ACNGT	4 cut(s)	187, 353, 434, 952
HpyCH4V	TGCA	3 cut(s)	233, 703, 875
HpyF3I	CTNAG	3 cut(s)	126, 135, 314
Hsp92I	GRCGYC	1 cut(s)	109
Hsp92II	CATG	6 cut(s)	35, 311, 397, 637, 827, 934
HspAI	GCGC	1 cut(s)	109
KasI	GGCGCC	1 cut(s)	108
KpnI	GGTACC	1 cut(s)	811
Ksp22I	TGATCA	1 cut(s)	751
Kzo9I	GATC	4 cut(s)	117, 672, 751, 943
LmnI	GCTCC	5 cut(s)	145, 798, 846, 858, 915
LweI	GCATC	1 cut(s)	690
MaeI	CTAG	1 cut(s)	105
MaeIII	GTNAC	4 cut(s)	317, 400, 493, 716
MalI	GATC	4 cut(s)	119, 674, 753, 945
MboI	GATC	4 cut(s)	117, 672, 751, 943
MboII	GAAGA	9 cut(s)	18, 33, 56, 256, 286, 529, 532, 733, 985
MflI	RGATCY	1 cut(s)	117
MhlI	GDGCHC	4 cut(s)	150, 315, 429, 822
MlsI	TGGCCA	1 cut(s)	302
MluCI	AATT	2 cut(s)	453, 837
MluNI	TGGCCA	1 cut(s)	302
Mly113I	GGCGCC	1 cut(s)	109
MlyI	GAGTC	1 cut(s)	908
Mox20I	TGGCCA	1 cut(s)	302
MscI	TGGCCA	1 cut(s)	302
MseI	TTAA	1 cut(s)	783
MslI	CAYNNNNRTG	1 cut(s)	929
Msp20I	TGGCCA	1 cut(s)	302
MspR9I	CCNGG	3 cut(s)	166, 582, 843
MvaI	CCWGG	3 cut(s)	166, 582, 843
NarI	GGCGCC	1 cut(s)	109
NcoI	CCATGG	1 cut(s)	633
NdeI	CATATG	1 cut(s)	518
NdeII	GATC	4 cut(s)	117, 672, 751, 943
NlaIII	CATG	6 cut(s)	35, 311, 397, 637, 827, 934
NlaIV	GGNNCC	3 cut(s)	110, 809, 917
NmuCI	GTSAC	4 cut(s)	317, 400, 493, 716
NspI	RCATGY	1 cut(s)	934
PasI	CCCWGGG	1 cut(s)	165
PciI	ACATGT	1 cut(s)	930
PflMI	CCANNNNNTGG	1 cut(s)	713
PleI	GAGTC	1 cut(s)	907
PluTI	GGCGCC	1 cut(s)	112
PpsI	GAGTC	1 cut(s)	907
PscI	ACATGT	1 cut(s)	930
Psp124BI	GAGCTC	2 cut(s)	150, 315
Psp6I	CCWGG	3 cut(s)	164, 580, 841
PspGI	CCWGG	3 cut(s)	164, 580, 841
PspN4I	GGNNCC	3 cut(s)	110, 809, 917
PspPI	GGNCC	3 cut(s)	155, 776, 956
PsuI	RGATCY	1 cut(s)	117
RsaI	GTAC	3 cut(s)	131, 809, 935
RsaNI	GTAC	3 cut(s)	130, 808, 934
RseI	CAYNNNNRTG	1 cut(s)	929
SacI	GAGCTC	2 cut(s)	150, 315
SaqAI	TTAA	1 cut(s)	783
Sau3AI	GATC	4 cut(s)	117, 672, 751, 943
Sau96I	GGNCC	3 cut(s)	155, 776, 956
SchI	GAGTC	1 cut(s)	908
ScrFI	CCNGG	3 cut(s)	166, 582, 843
SduI	GDGCHC	4 cut(s)	150, 315, 429, 822
SfaNI	GCATC	1 cut(s)	690
SfoI	GGCGCC	1 cut(s)	110
SinI	GGWCC	1 cut(s)	155
SmiMI	CAYNNNNRTG	1 cut(s)	929
SmlI	CTYRAG	2 cut(s)	176, 422
SmoI	CTYRAG	2 cut(s)	176, 422
Sse9I	AATT	2 cut(s)	453, 837
SspDI	GGCGCC	1 cut(s)	108
SspMI	CTAG	1 cut(s)	105
SstI	GAGCTC	2 cut(s)	150, 315
StyD4I	CCNGG	3 cut(s)	164, 580, 841
StyI	CCWWGG	1 cut(s)	633
TaaI	ACNGT	4 cut(s)	187, 353, 434, 952
TaqI	TCGA	2 cut(s)	946, 967
TasI	AATT	2 cut(s)	453, 837
TatI	WGTACW	1 cut(s)	933
Tru1I	TTAA	1 cut(s)	783
Tru9I	TTAA	1 cut(s)	783
TscAI	CASTG	1 cut(s)	192
TseFI	GTSAC	4 cut(s)	317, 400, 493, 716
Tsp45I	GTSAC	4 cut(s)	317, 400, 493, 716
TspDTI	ATGAA	3 cut(s)	598, 712, 986
TspGWI	ACGGA	2 cut(s)	388, 465
TspRI	CASTG	1 cut(s)	192
Van91I	CCANNNNNTGG	1 cut(s)	713
VpaK11BI	GGWCC	1 cut(s)	155
XapI	RAATTY	1 cut(s)	837
XceI	RCATGY	1 cut(s)	934
XmiI	GTMKAC	2 cut(s)	345, 447
XspI	CTAG	1 cut(s)	105

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.