Prupe.4G075300_v2.0.a1

Potassium channel

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0009345
Physical Location & Seq
Forward (+)
3684738 .. 3689310
4573 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G075300.2

Sequence Viewer

Length: 1287 bp
ATGGAGAAAGAGCCTCTGCTTCCCTATGTAGGCAGCCCGAGAAGAAAGCTCTCACCTTTACATACTCTCTGTCCGCTACCAGAAGAGAATGAATTCACTGCCCCTTTAACCCCTTCAGAGTTCAAAGACCGTATCATCTTTGGCCCTTCCCCCTCATCACCACAAGACTCTTCTCCTCTAGTTGATGCCTTGACTCTGCCTTACAGTTCACCAAGAGCCTCAAGGCCTCCTTCCTCTTCTTCTTTATTAGACGCCATAGCCACAACCCCAAAAGACCCACAACCTCAACAACCCCTACAATCTTGGCTCATTGACCCCAACTATTCATGGACCAAAACCAACCTCCATCGCTCCAAAACTGCACCTGCTATGGCTGTTATAAATGAGGTGGAAAACCGGCGTTCTGATCCTAGACCCCAATTTGGTTCACAGTCTATTGTAAGACAAGCTTTTATTCTTCTTGTTATATATTTGTCATTGGGTGTGACTATATATTGGTTTAACCGTCATCATTTCTCGGCAATTGAGACACACCCGGTAGTTGATGCATTGTACTTTTGTATTGTGACAATGTGCACAATTGGTTATGGAGATATTACACCCACTAGTACGGCAACCAAGTTGTTTTCTATAATGTTTGTGTTGGTGGGGTTTGGATTTATTGATATTTTGCTTAGTGGGATGGTCAGTTATGTGCTGGATTTGCAAGAGAATTATTTGCTAAGGAGTCTTAAGGGTGTGGGTGAGAAAAAGGAGTCCTACATATTTGATGTCAAGAAGGGGAGGATGAGGATTAGAATGAAGGTAGGATTGGCATTGGGAGTTGTGGTGCTATGTATTGGGATTGGTGTTGGTGTTATGCATTTTGTGGAAAGGCTTGGATGGTTGGATTCATTTTATCTTTCGGTTATGTCAGTTACCACCGTTGGGTATGGTGACCGCGCTTTCCAGTCTTTGTCGGGTCGCATCTTTGCTTCAATTTGGTTGCTTGTATCGACGCTTGCGGTTGCTCGAGCATTTCTGTATTTAGCTGAGGCAAGGGTGGATAAACGGCATAGGATAATGGCAAAGTGGGTTCTTGGTCAGGATATGACTGTTTCTGAGTTTCTTGCTGCTGACATTGACAATAATGGCTTTGTGAGTAAGTCAGAATATGTCATATACAAACTCAAGGAGATGGGAAAGGTATCAGAGAAAGATGTTATGCAGATCTGCACCCAATTTGATAGGCTAGACTCTGGGAACTGCGGAAAGATAAGCCTTGCGGATCTTATGAGTCGTCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000325 GO:0003674 GO:0003824 GO:0004788 GO:0005215 GO:0005216 GO:0005261 GO:0005267 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005829 GO:0005886 GO:0005887 GO:0006725 GO:0006732 GO:0006766 GO:0006767 GO:0006772 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006996 GO:0008150 GO:0008152 GO:0008324 GO:0009058 GO:0009108 GO:0009229 GO:0009314 GO:0009416 GO:0009507 GO:0009532 GO:0009533 GO:0009534 GO:0009536 GO:0009570 GO:0009579 GO:0009628 GO:0009657 GO:0009668 GO:0009705 GO:0009987 GO:0010027 GO:0010196 GO:0015075 GO:0015077 GO:0015079 GO:0015267 GO:0015318 GO:0015672 GO:0016020 GO:0016021 GO:0016043 GO:0016740 GO:0016772 GO:0016778 GO:0017144 GO:0018130 GO:0019438 GO:0019637 GO:0022607 GO:0022803 GO:0022838 GO:0022840 GO:0022841 GO:0022842 GO:0022857 GO:0022890 GO:0030001 GO:0030322 GO:0031090 GO:0031224 GO:0031226 GO:0031976 GO:0031984 GO:0034220 GO:0034641 GO:0042357 GO:0042391 GO:0042723 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044249 GO:0044271 GO:0044272 GO:0044281 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0046483 GO:0046873 GO:0050896 GO:0051179 GO:0051186 GO:0051188 GO:0051234 GO:0051259 GO:0051260 GO:0055085 GO:0061024 GO:0065003 GO:0065007 GO:0065008 GO:0071704 GO:0071804 GO:0071805 GO:0071840 GO:0071944 GO:0072527 GO:0072528 GO:0090407 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098805 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1990066
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ion_trans_2

Protein Analysis

429

Amino Acids

47.86

Weight (kDa)

8.74

Isoelectric Point (pI)

47.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 380
AarI CACCTGC 1 cut(s) 373
Acc36I ACCTGC 1 cut(s) 373
AccII CGCG 1 cut(s) 942
AciI CCGC 5 cut(s) 74, 940, 1004, 1248, 1265
AclWI GGATC 2 cut(s) 401, 1275
AcsI RAATTY 1 cut(s) 92
AcuI CTGAAG 1 cut(s) 99
AcyI GRCGYC 1 cut(s) 252
AfaI GTAC 2 cut(s) 554, 610
AfiI CCNNNNNNNGG 3 cut(s) 29, 422, 927
AflII CTTAAG 1 cut(s) 731
AgsI TTSAA 2 cut(s) 124, 978
AhlI ACTAGT 1 cut(s) 605
AjuI GAANNNNNNNTTGG 2 cut(s) 794, 826
AluBI AGCT 3 cut(s) 49, 449, 1031
AluI AGCT 3 cut(s) 49, 449, 1031
Alw21I GWGCWC 1 cut(s) 578
Alw26I GTCTC 1 cut(s) 521
Alw44I GTGCAC 1 cut(s) 574
AlwI GGATC 2 cut(s) 401, 1275
Ama87I CYCGRG 2 cut(s) 37, 1011
AoxI GGCC 2 cut(s) 142, 224
ApaLI GTGCAC 1 cut(s) 574
ApeKI GCWGC 2 cut(s) 33, 1112
ApoI RAATTY 1 cut(s) 92
Asp700I GAANNNNTTC 1 cut(s) 92
AspLEI GCGC 1 cut(s) 944
AspS9I GGNCC 2 cut(s) 143, 330
AsuC2I CCSGG 1 cut(s) 536
AsuHPI GGTGA 5 cut(s) 45, 150, 201, 755, 947
AvaI CYCGRG 2 cut(s) 37, 1011
AvaII GGWCC 1 cut(s) 330
BaeGI GKGCMC 1 cut(s) 578
Bbv12I GWGCWC 1 cut(s) 578
BbvCI CCTCAGC 1 cut(s) 1032
BbvI GCAGC 2 cut(s) 45, 1099
BccI CCATC 4 cut(s) 354, 676, 876, 1171
BceAI ACGGC 2 cut(s) 627, 1067
BcnI CCSGG 1 cut(s) 536
BcoDI GTCTC 1 cut(s) 521
BcuI ACTAGT 1 cut(s) 605
BfaI CTAG 4 cut(s) 179, 411, 606, 1232
BfrI CTTAAG 1 cut(s) 731
BfuAI ACCTGC 1 cut(s) 373
BglII AGATCT 1 cut(s) 1209
BisI GCNGC 2 cut(s) 34, 1113
BlsI GCNGC 2 cut(s) 35, 1114
Bme1390I CCNGG 1 cut(s) 536
Bme18I GGWCC 1 cut(s) 330
BmeT110I CYCGRG 2 cut(s) 37, 1011
BmgT120I GGNCC 2 cut(s) 143, 330
BmrFI CCNGG 1 cut(s) 536
BmsI GCATC 3 cut(s) 175, 535, 975
Bpu10I CCTNAGC 2 cut(s) 722, 1032
BpuEI CTTGAG 2 cut(s) 205, 1154
BpuMI CCSGG 1 cut(s) 536
BsaHI GRCGYC 1 cut(s) 252
BsaXI ACNNNNNCTCC 2 cut(s) 813, 843
Bsc4I CCNNNNNNNGG 3 cut(s) 29, 422, 927
Bse118I RCCGGY 1 cut(s) 396
Bse1I ACTGG 1 cut(s) 949
BseGI GGATG 3 cut(s) 687, 792, 887
BseLI CCNNNNNNNGG 3 cut(s) 29, 422, 927
BseMII CTCAG 2 cut(s) 1023, 1092
BseNI ACTGG 1 cut(s) 949
BseRI GAGGAG 1 cut(s) 165
BseSI GKGCMC 1 cut(s) 578
BseXI GCAGC 2 cut(s) 45, 1099
BsgI GTGCAG 2 cut(s) 345, 1198
Bsh1236I CGCG 1 cut(s) 942
BshFI GGCC 2 cut(s) 144, 226
BsiHKAI GWGCWC 1 cut(s) 578
BsiHKCI CYCGRG 2 cut(s) 37, 1011
BsiSI CCGG 2 cut(s) 397, 536
BslI CCNNNNNNNGG 3 cut(s) 29, 422, 927
BsmAI GTCTC 1 cut(s) 521
BsnI GGCC 2 cut(s) 144, 226
BsoBI CYCGRG 2 cut(s) 37, 1011
Bsp1286I GDGCHC 1 cut(s) 578
Bsp143I GATC 3 cut(s) 406, 1209, 1267
BspACI CCGC 5 cut(s) 74, 940, 1004, 1248, 1265
BspANI GGCC 2 cut(s) 144, 226
BspCNI CTCAG 2 cut(s) 1024, 1093
BspFNI CGCG 1 cut(s) 942
BspMI ACCTGC 1 cut(s) 373
BspPI GGATC 2 cut(s) 401, 1275
BspTI CTTAAG 1 cut(s) 731
BsrFI RCCGGY 1 cut(s) 396
BsrI ACTGG 1 cut(s) 949
BssAI RCCGGY 1 cut(s) 396
BssMI GATC 3 cut(s) 406, 1209, 1267
BssNI GRCGYC 1 cut(s) 252
Bst4CI ACNGT 6 cut(s) 131, 206, 432, 506, 925, 1096
Bst6I CTCTTC 3 cut(s) 78, 175, 241
BstACI GRCGYC 1 cut(s) 252
BstAFI CTTAAG 1 cut(s) 731
BstC8I GCNNGC 1 cut(s) 1002
BstDEI CTNAG 4 cut(s) 674, 722, 1032, 1101
BstEII GGTNACC 1 cut(s) 935
BstF5I GGATG 3 cut(s) 687, 792, 887
BstFNI CGCG 1 cut(s) 942
BstHHI GCGC 1 cut(s) 944
BstKTI GATC 3 cut(s) 409, 1212, 1270
BstMAI GTCTC 1 cut(s) 521
BstMBI GATC 3 cut(s) 406, 1209, 1267
BstMWI GCNNNNNNNGC 1 cut(s) 703
BstPI GGTNACC 1 cut(s) 935
BstSCI CCNGG 1 cut(s) 534
BstSLI GKGCMC 1 cut(s) 578
BstUI CGCG 1 cut(s) 942
BstV1I GCAGC 2 cut(s) 45, 1099
BstX2I RGATCY 2 cut(s) 1209, 1267
BstYI RGATCY 2 cut(s) 1209, 1267
BsuRI GGCC 2 cut(s) 144, 226
BtgZI GCGATG 1 cut(s) 332
BtsCI GGATG 3 cut(s) 687, 792, 887
BtsI GCAGTG 1 cut(s) 96
BtsIMutI CAGTG 1 cut(s) 96
BveI ACCTGC 1 cut(s) 373
Cac8I GCNNGC 1 cut(s) 1002
CfoI GCGC 1 cut(s) 944
Cfr10I RCCGGY 1 cut(s) 396
Cfr13I GGNCC 2 cut(s) 143, 330
CseI GACGC 2 cut(s) 260, 1006
Csp6I GTAC 2 cut(s) 553, 609
CviAII CATG 1 cut(s) 327
CviQI GTAC 2 cut(s) 553, 609
DdeI CTNAG 4 cut(s) 674, 722, 1032, 1101
DpnI GATC 3 cut(s) 408, 1211, 1269
DpnII GATC 3 cut(s) 406, 1209, 1267
Eam1104I CTCTTC 3 cut(s) 78, 175, 241
EarI CTCTTC 3 cut(s) 78, 175, 241
Eco147I AGGCCT 1 cut(s) 226
Eco47I GGWCC 1 cut(s) 330
Eco57I CTGAAG 1 cut(s) 99
Eco88I CYCGRG 2 cut(s) 37, 1011
Eco91I GGTNACC 1 cut(s) 935
EcoO65I GGTNACC 1 cut(s) 935
EcoRI GAATTC 1 cut(s) 92
EcoT22I ATGCAT 2 cut(s) 550, 864
FaeI CATG 1 cut(s) 330
FalI AAGNNNNNCTT 4 cut(s) 214, 246, 433, 465
FatI CATG 1 cut(s) 326
Fnu4HI GCNGC 2 cut(s) 34, 1113
FokI GGATG 3 cut(s) 694, 799, 894
Fsp4HI GCNGC 2 cut(s) 34, 1113
FspBI CTAG 4 cut(s) 179, 411, 606, 1232
GlaI GCGC 1 cut(s) 943
GluI GCNGC 2 cut(s) 34, 1113
HaeIII GGCC 2 cut(s) 144, 226
HapII CCGG 2 cut(s) 397, 536
HgaI GACGC 2 cut(s) 260, 1006
HhaI GCGC 1 cut(s) 944
Hin1I GRCGYC 1 cut(s) 252
Hin1II CATG 1 cut(s) 330
Hin6I GCGC 1 cut(s) 942
HinP1I GCGC 1 cut(s) 942
HindIII AAGCTT 1 cut(s) 447
HinfI GANTC 7 cut(s) 167, 193, 727, 755, 890, 1235, 1276
HpaII CCGG 2 cut(s) 397, 536
HphI GGTGA 5 cut(s) 45, 150, 201, 755, 947
Hpy166II GTNNAC 3 cut(s) 209, 428, 576
Hpy188I TCNGA 5 cut(s) 118, 406, 1102, 1150, 1192
Hpy188III TCNNGA 2 cut(s) 775, 1085
Hpy8I GTNNAC 3 cut(s) 209, 428, 576
Hpy99I CGWCG 1 cut(s) 1000
HpyAV CCTTC 5 cut(s) 123, 156, 240, 772, 796
HpyCH4III ACNGT 6 cut(s) 131, 206, 432, 506, 925, 1096
HpyCH4V TGCA 7 cut(s) 362, 548, 576, 706, 862, 1207, 1215
HpyF10VI GCNNNNNNNGC 1 cut(s) 703
HpyF3I CTNAG 4 cut(s) 674, 722, 1032, 1101
Hsp92I GRCGYC 1 cut(s) 252
Hsp92II CATG 1 cut(s) 330
HspAI GCGC 1 cut(s) 942
Kzo9I GATC 3 cut(s) 406, 1209, 1267
LmnI GCTCC 1 cut(s) 356
LpnPI CCDG 8 cut(s) 93, 378, 410, 549, 683, 962, 1070, 1224
Lsp1109I GCAGC 2 cut(s) 45, 1099
LweI GCATC 3 cut(s) 175, 535, 975
MaeI CTAG 4 cut(s) 179, 411, 606, 1232
MaeIII GTNAC 4 cut(s) 484, 565, 916, 935
MalI GATC 3 cut(s) 408, 1211, 1269
MboI GATC 3 cut(s) 406, 1209, 1267
MboII GAAGA 6 cut(s) 54, 95, 162, 228, 231, 449
MfeI CAATTG 2 cut(s) 522, 579
MflI RGATCY 2 cut(s) 1209, 1267
MhlI GDGCHC 1 cut(s) 578
MluCI AATT 7 cut(s) 92, 419, 522, 579, 712, 978, 1220
MlyI GAGTC 6 cut(s) 161, 187, 736, 764, 1229, 1285
MmeI TCCRAC 1 cut(s) 867
Mph1103I ATGCAT 2 cut(s) 550, 864
MroXI GAANNNNTTC 1 cut(s) 92
MseI TTAA 3 cut(s) 107, 501, 732
MspCI CTTAAG 1 cut(s) 731
MspI CCGG 2 cut(s) 397, 536
MspR9I CCNGG 1 cut(s) 536
MunI CAATTG 2 cut(s) 522, 579
MvnI CGCG 1 cut(s) 942
MwoI GCNNNNNNNGC 1 cut(s) 703
NciI CCSGG 1 cut(s) 536
NdeII GATC 3 cut(s) 406, 1209, 1267
NlaIII CATG 1 cut(s) 330
NmeAIII GCCGAG 1 cut(s) 497
NmuCI GTSAC 3 cut(s) 484, 565, 935
NsiI ATGCAT 2 cut(s) 550, 864
PaeR7I CTCGAG 1 cut(s) 1011
PaqCI CACCTGC 1 cut(s) 373
PceI AGGCCT 1 cut(s) 226
PdmI GAANNNNTTC 1 cut(s) 92
PfeI GAWTC 1 cut(s) 890
PkrI GCNGC 2 cut(s) 35, 1114
PleI GAGTC 6 cut(s) 161, 187, 735, 763, 1229, 1284
PpsI GAGTC 6 cut(s) 161, 187, 735, 763, 1229, 1284
PsiI TTATAA 1 cut(s) 380
PspEI GGTNACC 1 cut(s) 935
PspPI GGNCC 2 cut(s) 143, 330
PspXI VCTCGAGB 1 cut(s) 1011
PsuI RGATCY 2 cut(s) 1209, 1267
RsaI GTAC 2 cut(s) 554, 610
RsaNI GTAC 2 cut(s) 553, 609
SaqAI TTAA 3 cut(s) 107, 501, 732
SatI GCNGC 2 cut(s) 34, 1113
Sau3AI GATC 3 cut(s) 406, 1209, 1267
Sau96I GGNCC 2 cut(s) 143, 330
SchI GAGTC 6 cut(s) 161, 187, 736, 764, 1229, 1285
ScrFI CCNGG 1 cut(s) 536
SduI GDGCHC 1 cut(s) 578
SfaNI GCATC 3 cut(s) 175, 535, 975
Sfr274I CTCGAG 1 cut(s) 1011
SinI GGWCC 1 cut(s) 330
SlaI CTCGAG 1 cut(s) 1011
SmlI CTYRAG 4 cut(s) 220, 731, 1011, 1169
SmoI CTYRAG 4 cut(s) 220, 731, 1011, 1169
SpeI ACTAGT 1 cut(s) 605
Sse9I AATT 7 cut(s) 92, 419, 522, 579, 712, 978, 1220
SseBI AGGCCT 1 cut(s) 226
SsiI CCGC 5 cut(s) 74, 940, 1004, 1248, 1265
SspMI CTAG 4 cut(s) 179, 411, 606, 1232
StuI AGGCCT 1 cut(s) 226
StyD4I CCNGG 1 cut(s) 534
TaaI ACNGT 6 cut(s) 131, 206, 432, 506, 925, 1096
TaqI TCGA 2 cut(s) 995, 1012
TasI AATT 7 cut(s) 92, 419, 522, 579, 712, 978, 1220
TatI WGTACW 1 cut(s) 552
TfiI GAWTC 1 cut(s) 890
Tru1I TTAA 3 cut(s) 107, 501, 732
Tru9I TTAA 3 cut(s) 107, 501, 732
TscAI CASTG 1 cut(s) 103
TseFI GTSAC 3 cut(s) 484, 565, 935
TseI GCWGC 2 cut(s) 33, 1112
Tsp45I GTSAC 3 cut(s) 484, 565, 935
TspDTI ATGAA 4 cut(s) 105, 315, 815, 882
TspRI CASTG 1 cut(s) 103
Vha464I CTTAAG 1 cut(s) 731
VneI GTGCAC 1 cut(s) 574
VpaK11BI GGWCC 1 cut(s) 330
XapI RAATTY 1 cut(s) 92
XhoI CTCGAG 1 cut(s) 1011
XmnI GAANNNNTTC 1 cut(s) 92
XspI CTAG 4 cut(s) 179, 411, 606, 1232
Zsp2I ATGCAT 2 cut(s) 550, 864
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.