Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0011291

Physical Location & Seq

Genomic Coordinates Forward (+)

5181078 .. 5189748

Gene Structure 8671 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G101500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2709 bp

ATGGTGGGAATGATTATGACAAATGCTCAACTGGGCGTCTCCAATTTTCAAAGAAATGATATTTTCGTTGCGAATTGTAGCTCAAAGCCAGGTCCTTTATCTGGGTTTTCGCTTTTTCGGAGACCCATCTTCTGTGTTGGCTTATATGAGAAGAATGTGAAGAAGAATCGGGGTTTTGGTATTAAAATTCCGAATCGAAGAACAGTTATTAGTGCTGTGTCGAAGGAAGGGTCTGATAACAGGTCGGTTGGTGGTGAAATTCTAGAGAAAGAGTTTGAATTTAAGCCATCATTTGATCAGTACTTGAAGGTTATGGGGACTGTTAGACTTAGAAGTGATAGAGATAAGCAGGACAGCTCAAAAGAGCAGAATCCAAAGCATAATTTGAGGAGTAGAGGTGTTTCCAGGAGTCTGGTGTCTGAGGGTAATGAAGAGCATGTAAAATTGGGGGAGTCTGAAGAGCATTCTAATCAAGAGAAGGCGTCAAAAGCTGCAAAGCAAAATGAGGCACTTGGAAATAGAAACGGAATTATGGGAAAAAGCAAAAGGCAAGGAGTTAAAGGATTTAAGGATGAATATGATAGCAGACAGAGCAACAGGGATGAAAAGGAAAAGAAGAAGATAAGGGGAGAGGCAAGAGATGGAAGGTCAAAATATTCGGGTAGGCTAGAACCAGAGTTGAACTTCAGAGGTAAAAGTACAATGGCACGAAATGTGAAAGATGACCTAAGAGTTTACAAGTCAACAGATAAATCCTTCGACAGAGGGAAAGTTGGTGTTAAAATTCAAGGTGGACTTGAGAGGAACCACATCAATGCTGAGAATGCCACTGATAGAGGTTTTTCTCGTAGAAGTGAGAAGTTAACTAAGAGTGGTAGGGATTTCCCCAAAAAAAATTATGACAATAGCATGGAGGTGGAAAGAGCTGCATTTAAGAATTTTGATGAATTCGGTGATATTATGGACAAGCCACGAGTTTCACAAATGGAAATGGAGGAGAGGATCCAGAAGCTAGCAAAATGGCTGAATGGTGCAGACATTGACATGCCTGAGTGGATGTTTTCAAAGATGATGCGAAGTGCACAAATCAGATTCACAGATCATTCAATATTGAGAGTTATCCAGCTATTGGGAAAACTAGGAAACTGGAGACGGGTGTTACAAGTCATTGAGTGGCTTCAAATGCGTGAGCGTTTCAAATCCCACAAGCTCAGATACATATACACAACTGCACTTGATGTACTTGGAAAGGCAAGGAGACCTGTGGAGGCACTTAATGTATTTCATGCAATGCTGCAAGAAATGTCCTCATATCCTGACTTGGTAGCTTATCATTCTATTGCCGTAACTCTTGGACAAGCGGGACATATGAGGGAACTTTTTGATGTGATTGATACTATGAGATCTCCTCCCAAGAAGAAGTTCAAAACAGGGGCACTTGGGAAGTGGGACCCTCGGTTGGAACCAGATATTGTTGTCTTCCATGCGGTATTAAATGCTTGTGTCCAGCGCAAACAATGGGAAGGAGCATTTTGGGTTTTGCAGCAGTTACAGCAACAAGGCCTACAGCCTGCGGCTACAACATATGGACTTGTCATGGAGGTGATGTTAGCATGTGGCAAGTACAACTTGGTTCACGAATTTTTCAAGAAAGTGCAGAAATCTTCTATACCAAATGCTTTAACTTTCAGAGTTATTGTGAACACTCTTTGGAGAGAAGGTAAAGTAGGTGAAGCTGTATTGGTTGTTCAGAACATGGAAAGACGAGGAATAGTAGGTTCTGCAGCTCTTTATTATGACTTTGCTCGATGTCTTTGTAGTGCTGGACGGTGCCAAGAAGCACTGATGCAGATTGAGAAGATATGTAAGGTTGCAAATAAGCCTCTAGTAGTGACTTACACTGGTTTAATTCAAGCTTGTTTGGACGCTGGAAGCATTAAAAATGGGGCATATGTTTTCAAACAAATGGAGAACTTTTGCTCCCCAAATCTTGTTACTTGCAACACAATGCTGAAAGGTTATTTGGACCATGGGATGTTTGAAGAAGCAAAAGAGCTGTTCCTGAAGATGTTAGATAATGGGAATAATATCAGCAGCAAATCTGACTGTAAGGCTCGGGTGAAACCAGATAGCTACACGTTCAACACTTTGTTAGATGCCTGCATCACAGAAAAGAGGTGGGACGATTTCGAATTTGTTTACAAAATGATGCTACACCATGGGTATCACTTCAATGCTAAACGCCATCTTCGGATGATATTGGATGCTTGCGAAGCTGGAAAGGGTGAGCTACTGGACATAACTTGGACGCACTTGACGGAGGCAGGCCGGAGTCCACCTCCTCCTCTCATCAAGGAAAGGTTTTGCACAAAGCTAGAGAAAGATGACTATGCTGCTGCTCTCACCTGTATTACGGATCCAAATCTCAGTGAGCTGCAGACATTCTTCTCAAAGAATGCATGGTTGAAGTTGTTCAAGGAAAATGCAGAAAAGTTTCAGAAAGACACTTTTGTACGGTTAGTTCATGAGGGTAGCATTCTTATCAACAGAACTGATAGGTCGAACCCTGTTTTTCAAAATCTTATGGCGGCTTGTGGAGAACTTGATAGAACCTGTTTAGTGGGAGTTGATTTTAAACAAAGTGAAACTGTATGTACAACTCATACTGAACCAGCTATGAATTCTTTGATGAATAGTATTCATATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009451 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0016070 GO:0016787 GO:0016788 GO:0022414 GO:0032501 GO:0032502 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

903

Amino Acids

102.95

Weight (kDa)

9.34

Isoelectric Point (pI)

39.26

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011291)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30610 AT1G30610
fragaria_vesca	FvH4_3g11350
malus_domestica	MD05G1264100.v1.1 MD10G1242100.v1.1
prunus_persica	Prupe.4G101500_v2.0.a1
pyrus_communis	pycom05g24820
rosa_chinensis	RchiOBHm_Chr5g0018311
rosa_laevigata	RLG00000032350
rosa_multiflora	Rmu_sc0007362.1_g000034 Rmu_sc0011919.1_g000006 Rmu_sc0038151.1_g000001 Rmu_sc0038657.1_g000001
rosa_roxburghii	Rroxscaffold_1G00059430
rosa_rugosa	Rorug05G0041300
rosa_samantha	Rh5AG134400 Rh5BG133200 Rh5CG144900 Rh5DG134600
rosa_wichuraiana	Rw5G011750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1830
AccB7I	CCANNNNNTGG	1 cut(s)	1129
AciI	CCGC	4 cut(s)	1361, 1487, 1574, 2588
AclWI	GGATC	4 cut(s)	997, 1010, 2411, 2424
AcsI	RAATTY	9 cut(s)	186, 258, 278, 783, 937, 947, 1640, 2192, 2680
AcuI	CTGAAG	3 cut(s)	477, 670, 2084
AcyI	GRCGYC	2 cut(s)	36, 482
AfaI	GTAC	6 cut(s)	302, 700, 1242, 1625, 2514, 2656
AfiI	CCNNNNNNNGG	3 cut(s)	101, 1129, 1459
AflIII	ACRYGT	1 cut(s)	2136
AjnI	CCWGG	2 cut(s)	88, 404
AjuI	GAANNNNNNNTTGG	4 cut(s)	1406, 1438, 2006, 2038
AloI	GAACNNNNNNTCC	2 cut(s)	1964, 1996
Alw21I	GWGCWC	1 cut(s)	1084
Alw26I	GTCTC	4 cut(s)	43, 115, 1144, 1252
Alw44I	GTGCAC	1 cut(s)	1080
AlwI	GGATC	4 cut(s)	997, 1010, 2411, 2424
Ama87I	CYCGRG	1 cut(s)	2115
AoxI	GGCC	2 cut(s)	1561, 2326
ApaLI	GTGCAC	1 cut(s)	1080
ApeKI	GCWGC	9 cut(s)	491, 926, 1294, 1543, 1784, 2094, 2393, 2396, 2434
ApoI	RAATTY	9 cut(s)	186, 258, 278, 783, 937, 947, 1640, 2192, 2680
ArsI	GACNNNNNNTTYG	2 cut(s)	215, 247
Asp700I	GAANNNNTTC	3 cut(s)	1421, 2471, 2493
AspLEI	GCGC	1 cut(s)	1512
AspS9I	GGNCC	3 cut(s)	92, 1450, 2026
AsuHPI	GGTGA	7 cut(s)	266, 965, 1615, 1742, 2131, 2297, 2395
AsuII	TTCGAA	1 cut(s)	2190
AsuNHI	GCTAGC	1 cut(s)	1012
AvaI	CYCGRG	1 cut(s)	2115
AvaII	GGWCC	3 cut(s)	92, 1450, 2026
BaeGI	GKGCMC	2 cut(s)	1084, 1438
BamHI	GGATCC	2 cut(s)	1002, 2416
BanI	GGYRCC	1 cut(s)	1830
BauI	CACGAG	1 cut(s)	972
BbsI	GAAGAC	1 cut(s)	1471
Bbv12I	GWGCWC	1 cut(s)	1084
BbvI	GCAGC	9 cut(s)	478, 913, 1281, 1555, 1796, 2106, 2380, 2383, 2421
BccI	CCATC	4 cut(s)	134, 295, 635, 2253
BceAI	ACGGC	1 cut(s)	1328
BciT130I	CCWGG	2 cut(s)	90, 406
BclI	TGATCA	1 cut(s)	295
BcoDI	GTCTC	4 cut(s)	43, 115, 1144, 1252
BfaI	CTAG	6 cut(s)	263, 668, 1013, 1139, 1886, 2375
BfmI	CTRYAG	3 cut(s)	1565, 1782, 2435
BglII	AGATCT	1 cut(s)	1403
BmcAI	AGTACT	1 cut(s)	302
Bme1390I	CCNGG	2 cut(s)	90, 406
Bme18I	GGWCC	3 cut(s)	92, 1450, 2026
BmeT110I	CYCGRG	1 cut(s)	2115
BmgT120I	GGNCC	3 cut(s)	92, 1450, 2026
BmiI	GGNNCC	7 cut(s)	806, 1004, 1451, 1452, 1464, 1832, 2418
BmrFI	CCNGG	2 cut(s)	90, 406
BmrI	ACTGGG	1 cut(s)	41
BmsI	GCATC	6 cut(s)	1062, 1836, 2146, 2172, 2199, 2254
BmtI	GCTAGC	1 cut(s)	1016
BmuI	ACTGGG	1 cut(s)	41
BpiI	GAAGAC	1 cut(s)	1471
BplI	GAGNNNNNCTC	4 cut(s)	1393, 1425, 2323, 2355
BpmI	CTGGAG	1 cut(s)	1168
Bpu14I	TTCGAA	1 cut(s)	2190
BpuEI	CTTGAG	1 cut(s)	818
BsaBI	GATNNNNATC	1 cut(s)	2421
BsaHI	GRCGYC	2 cut(s)	36, 482
BsaI	GGTCTC	2 cut(s)	115, 1252
BsaJI	CCNNGG	3 cut(s)	1454, 2029, 2218
BsaXI	ACNNNNNCTCC	8 cut(s)	382, 412, 1592, 1622, 1705, 1735, 1964, 1994
Bsc4I	CCNNNNNNNGG	3 cut(s)	101, 1129, 1459
Bse1I	ACTGG	4 cut(s)	36, 1151, 1906, 2298
Bse3DI	GCAATG	1 cut(s)	1296
Bse8I	GATNNNNATC	1 cut(s)	2421
BseBI	CCWGG	2 cut(s)	90, 406
BseDI	CCNNGG	3 cut(s)	1454, 2029, 2218
BseGI	GGATG	6 cut(s)	577, 607, 1062, 2040, 2259, 2269
BseJI	GATNNNNATC	1 cut(s)	2421
BseLI	CCNNNNNNNGG	3 cut(s)	101, 1129, 1459
BseMI	GCAATG	1 cut(s)	1296
BseMII	CTCAG	5 cut(s)	411, 810, 1041, 1225, 2440
BseNI	ACTGG	4 cut(s)	36, 1151, 1906, 2298
BseRI	GAGGAG	5 cut(s)	403, 1010, 1398, 2331, 2334
BseSI	GKGCMC	2 cut(s)	1084, 1438
BseXI	GCAGC	9 cut(s)	478, 913, 1281, 1555, 1796, 2106, 2380, 2383, 2421
BsgI	GTGCAG	3 cut(s)	1053, 1215, 1676
BshFI	GGCC	2 cut(s)	1563, 2328
BshNI	GGYRCC	1 cut(s)	1830
BsiHKAI	GWGCWC	1 cut(s)	1084
BsiHKCI	CYCGRG	1 cut(s)	2115
BsiSI	CCGG	1 cut(s)	2329
BslFI	GGGAC	4 cut(s)	331, 1377, 1463, 2195
BslI	CCNNNNNNNGG	3 cut(s)	101, 1129, 1459
BsmAI	GTCTC	4 cut(s)	43, 115, 1144, 1252
BsmBI	CGTCTC	2 cut(s)	43, 1144
BsmFI	GGGAC	4 cut(s)	331, 1377, 1463, 2195
BsmI	GAATGC	4 cut(s)	463, 829, 2461, 2535
BsnI	GGCC	2 cut(s)	1563, 2328
Bso31I	GGTCTC	2 cut(s)	115, 1252
BsoBI	CYCGRG	1 cut(s)	2115
Bsp119I	TTCGAA	1 cut(s)	2190
Bsp1286I	GDGCHC	2 cut(s)	1084, 1438
Bsp1407I	TGTACA	1 cut(s)	2654
Bsp143I	GATC	5 cut(s)	295, 1002, 1099, 1403, 2416
Bsp19I	CCATGG	2 cut(s)	2029, 2218
BspACI	CCGC	4 cut(s)	1361, 1487, 1574, 2588
BspANI	GGCC	2 cut(s)	1563, 2328
BspCNI	CTCAG	5 cut(s)	412, 811, 1042, 1224, 2439
BspHI	TCATGA	1 cut(s)	2524
BspLI	GGNNCC	7 cut(s)	806, 1004, 1451, 1452, 1464, 1832, 2418
BspMAI	CTGCAG	2 cut(s)	1786, 2439
BspOI	GCTAGC	1 cut(s)	1016
BspPI	GGATC	4 cut(s)	997, 1010, 2411, 2424
BspQI	GCTCTTC	2 cut(s)	426, 453
BspT104I	TTCGAA	1 cut(s)	2190
BspT107I	GGYRCC	1 cut(s)	1830
BspTNI	GGTCTC	2 cut(s)	115, 1252
BsrDI	GCAATG	1 cut(s)	1296
BsrGI	TGTACA	1 cut(s)	2654
BsrI	ACTGG	4 cut(s)	36, 1151, 1906, 2298
BssECI	CCNNGG	3 cut(s)	1454, 2029, 2218
BssMI	GATC	5 cut(s)	295, 1002, 1099, 1403, 2416
BssNI	GRCGYC	2 cut(s)	36, 482
BssSI	CACGAG	1 cut(s)	972
BssT1I	CCWWGG	2 cut(s)	2029, 2218
Bst2BI	CACGAG	1 cut(s)	972
Bst2UI	CCWGG	2 cut(s)	90, 406
Bst4CI	ACNGT	6 cut(s)	205, 322, 1830, 2108, 2517, 2650
Bst6I	CTCTTC	2 cut(s)	426, 453
BstACI	GRCGYC	2 cut(s)	36, 482
BstAUI	TGTACA	1 cut(s)	2654
BstBI	TTCGAA	1 cut(s)	2190
BstC8I	GCNNGC	5 cut(s)	1014, 1572, 2161, 2269, 2326
BstDEI	CTNAG	8 cut(s)	329, 420, 728, 819, 867, 1050, 1211, 2426
BstDSI	CCRYGG	2 cut(s)	2029, 2218
BstF5I	GGATG	6 cut(s)	577, 607, 1062, 2040, 2259, 2269
BstHHI	GCGC	1 cut(s)	1512
BstKTI	GATC	5 cut(s)	298, 1005, 1102, 1406, 2419
BstMAI	GTCTC	4 cut(s)	43, 115, 1144, 1252
BstMBI	GATC	5 cut(s)	295, 1002, 1099, 1403, 2416
BstMWI	GCNNNNNNNGC	6 cut(s)	488, 591, 824, 1183, 1552, 2273
BstNI	CCWGG	2 cut(s)	90, 406
BstNSI	RCATGY	3 cut(s)	440, 1048, 1617
BstSCI	CCNGG	2 cut(s)	88, 404
BstSFI	CTRYAG	3 cut(s)	1565, 1782, 2435
BstSLI	GKGCMC	2 cut(s)	1084, 1438
BstV1I	GCAGC	9 cut(s)	478, 913, 1281, 1555, 1796, 2106, 2380, 2383, 2421
BstV2I	GAAGAC	1 cut(s)	1471
BstX2I	RGATCY	3 cut(s)	1002, 1403, 2416
BstXI	CCANNNNNNTGG	1 cut(s)	412
BstYI	RGATCY	3 cut(s)	1002, 1403, 2416
BsuRI	GGCC	2 cut(s)	1563, 2328
BtgI	CCRYGG	2 cut(s)	2029, 2218
BtsCI	GGATG	6 cut(s)	577, 607, 1062, 2040, 2259, 2269
BtsIMutI	CAGTG	4 cut(s)	828, 1841, 1899, 2434
Cac8I	GCNNGC	5 cut(s)	1014, 1572, 2161, 2269, 2326
CciI	TCATGA	1 cut(s)	2524
CfoI	GCGC	1 cut(s)	1512
Cfr13I	GGNCC	3 cut(s)	92, 1450, 2026
CseI	GACGC	4 cut(s)	25, 471, 1934, 2317
Csp6I	GTAC	6 cut(s)	301, 699, 1241, 1624, 2513, 2655
CviQI	GTAC	6 cut(s)	301, 699, 1241, 1624, 2513, 2655
DdeI	CTNAG	8 cut(s)	329, 420, 728, 819, 867, 1050, 1211, 2426
DpnI	GATC	5 cut(s)	297, 1004, 1101, 1405, 2418
DpnII	GATC	5 cut(s)	295, 1002, 1099, 1403, 2416
DraI	TTTAAA	1 cut(s)	2635
Eam1104I	CTCTTC	2 cut(s)	426, 453
EarI	CTCTTC	2 cut(s)	426, 453
Eco130I	CCWWGG	2 cut(s)	2029, 2218
Eco147I	AGGCCT	1 cut(s)	1563
Eco31I	GGTCTC	2 cut(s)	115, 1252
Eco47I	GGWCC	3 cut(s)	92, 1450, 2026
Eco57I	CTGAAG	3 cut(s)	477, 670, 2084
Eco88I	CYCGRG	1 cut(s)	2115
EcoO109I	RGGNCCY	2 cut(s)	92, 1450
EcoRI	GAATTC	2 cut(s)	947, 2680
EcoRII	CCWGG	2 cut(s)	88, 404
EcoT14I	CCWWGG	2 cut(s)	2029, 2218
EcoT22I	ATGCAT	1 cut(s)	2461
ErhI	CCWWGG	2 cut(s)	2029, 2218
Esp3I	CGTCTC	2 cut(s)	43, 1144
FalI	AAGNNNNNCTT	4 cut(s)	780, 812, 1613, 1645
FaqI	GGGAC	4 cut(s)	331, 1377, 1463, 2195
FauI	CCCGC	1 cut(s)	1354
FauNDI	CATATG	3 cut(s)	1368, 1585, 1951
FbaI	TGATCA	1 cut(s)	295
FokI	GGATG	6 cut(s)	584, 614, 1069, 2047, 2266, 2276
FspBI	CTAG	6 cut(s)	263, 668, 1013, 1139, 1886, 2375
GlaI	GCGC	1 cut(s)	1511
GsuI	CTGGAG	1 cut(s)	1168
HaeIII	GGCC	2 cut(s)	1563, 2328
HapII	CCGG	1 cut(s)	2329
HgaI	GACGC	4 cut(s)	25, 471, 1934, 2317
HhaI	GCGC	1 cut(s)	1512
Hin1I	GRCGYC	2 cut(s)	36, 482
Hin6I	GCGC	1 cut(s)	1510
HinP1I	GCGC	1 cut(s)	1510
HincII	GTYRAC	2 cut(s)	744, 864
HindII	GTYRAC	2 cut(s)	744, 864
HindIII	AAGCTT	1 cut(s)	1914
HinfI	GANTC	7 cut(s)	166, 193, 370, 409, 452, 1092, 2332
HpaI	GTTAAC	1 cut(s)	864
HpaII	CCGG	1 cut(s)	2329
HphI	GGTGA	7 cut(s)	266, 965, 1615, 1742, 2131, 2297, 2395
Hpy166II	GTNNAC	9 cut(s)	736, 744, 794, 864, 1082, 1636, 1702, 2200, 2336
Hpy188III	TCNNGA	8 cut(s)	263, 473, 1006, 1316, 1637, 1648, 2062, 2525
Hpy8I	GTNNAC	9 cut(s)	736, 744, 794, 864, 1082, 1636, 1702, 2200, 2336
HpyAV	CCTTC	8 cut(s)	217, 221, 301, 472, 639, 766, 1517, 1712
HpyCH4III	ACNGT	6 cut(s)	205, 322, 1830, 2108, 2517, 2650
HpyCH4IV	ACGT	1 cut(s)	2138
HpyF10VI	GCNNNNNNNGC	6 cut(s)	488, 591, 824, 1183, 1552, 2273
HpyF3I	CTNAG	8 cut(s)	329, 420, 728, 819, 867, 1050, 1211, 2426
HpySE526I	ACGT	1 cut(s)	2138
Hsp92I	GRCGYC	2 cut(s)	36, 482
HspAI	GCGC	1 cut(s)	1510
KflI	GGGWCCC	1 cut(s)	1450
Ksp22I	TGATCA	1 cut(s)	295
KspAI	GTTAAC	1 cut(s)	864
Kzo9I	GATC	5 cut(s)	295, 1002, 1099, 1403, 2416
LguI	GCTCTTC	2 cut(s)	426, 453
LmnI	GCTCC	2 cut(s)	1526, 1985
Lsp1109I	GCAGC	9 cut(s)	478, 913, 1281, 1555, 1796, 2106, 2380, 2383, 2421
LweI	GCATC	6 cut(s)	1062, 1836, 2146, 2172, 2199, 2254
MaeI	CTAG	6 cut(s)	263, 668, 1013, 1139, 1886, 2375
MaeII	ACGT	1 cut(s)	2138
MaeIII	GTNAC	5 cut(s)	1158, 1345, 1548, 1891, 1993
MalI	GATC	5 cut(s)	297, 1004, 1101, 1405, 2418
MboI	GATC	5 cut(s)	295, 1002, 1099, 1403, 2416
MflI	RGATCY	3 cut(s)	1002, 1403, 2416
MhlI	GDGCHC	2 cut(s)	1084, 1438
MlyI	GAGTC	3 cut(s)	418, 461, 2341
MmeI	TCCRAC	1 cut(s)	1440
Mph1103I	ATGCAT	1 cut(s)	2461
MroXI	GAANNNNTTC	3 cut(s)	1421, 2471, 2493
MslI	CAYNNNNRTG	5 cut(s)	813, 914, 1043, 1601, 2232
MspI	CCGG	1 cut(s)	2329
MspR9I	CCNGG	2 cut(s)	90, 406
Mva1269I	GAATGC	4 cut(s)	463, 829, 2461, 2535
MvaI	CCWGG	2 cut(s)	90, 406
MwoI	GCNNNNNNNGC	6 cut(s)	488, 591, 824, 1183, 1552, 2273
NcoI	CCATGG	2 cut(s)	2029, 2218
NdeI	CATATG	3 cut(s)	1368, 1585, 1951
NdeII	GATC	5 cut(s)	295, 1002, 1099, 1403, 2416
NheI	GCTAGC	1 cut(s)	1012
NlaIV	GGNNCC	7 cut(s)	806, 1004, 1451, 1452, 1464, 1832, 2418
NmuCI	GTSAC	1 cut(s)	1891
NsiI	ATGCAT	1 cut(s)	2461
NspI	RCATGY	3 cut(s)	440, 1048, 1617
NspV	TTCGAA	1 cut(s)	2190
PagI	TCATGA	1 cut(s)	2524
PceI	AGGCCT	1 cut(s)	1563
PciSI	GCTCTTC	2 cut(s)	426, 453
PctI	GAATGC	4 cut(s)	463, 829, 2461, 2535
PdmI	GAANNNNTTC	3 cut(s)	1421, 2471, 2493
PfeI	GAWTC	4 cut(s)	166, 193, 370, 1092
PflMI	CCANNNNNTGG	1 cut(s)	1129
PfoI	TCCNGGA	1 cut(s)	404
PleI	GAGTC	3 cut(s)	417, 460, 2340
PpsI	GAGTC	3 cut(s)	417, 460, 2340
PpuMI	RGGWCCY	2 cut(s)	92, 1450
Psp5II	RGGWCCY	2 cut(s)	92, 1450
Psp6I	CCWGG	2 cut(s)	88, 404
PspGI	CCWGG	2 cut(s)	88, 404
PspN4I	GGNNCC	7 cut(s)	806, 1004, 1451, 1452, 1464, 1832, 2418
PspPI	GGNCC	3 cut(s)	92, 1450, 2026
PspPPI	RGGWCCY	2 cut(s)	92, 1450
PsrI	GAACNNNNNNTAC	4 cut(s)	1731, 1763, 2505, 2537
PstI	CTGCAG	2 cut(s)	1786, 2439
PsuI	RGATCY	3 cut(s)	1002, 1403, 2416
RsaI	GTAC	6 cut(s)	302, 700, 1242, 1625, 2514, 2656
RsaNI	GTAC	6 cut(s)	301, 699, 1241, 1624, 2513, 2655
RseI	CAYNNNNRTG	5 cut(s)	813, 914, 1043, 1601, 2232
SapI	GCTCTTC	2 cut(s)	426, 453
Sau3AI	GATC	5 cut(s)	295, 1002, 1099, 1403, 2416
Sau96I	GGNCC	3 cut(s)	92, 1450, 2026
ScaI	AGTACT	1 cut(s)	302
SchI	GAGTC	3 cut(s)	418, 461, 2341
ScrFI	CCNGG	2 cut(s)	90, 406
SduI	GDGCHC	2 cut(s)	1084, 1438
SfaNI	GCATC	6 cut(s)	1062, 1836, 2146, 2172, 2199, 2254
SfcI	CTRYAG	3 cut(s)	1565, 1782, 2435
SfuI	TTCGAA	1 cut(s)	2190
SinI	GGWCC	3 cut(s)	92, 1450, 2026
SmiMI	CAYNNNNRTG	5 cut(s)	813, 914, 1043, 1601, 2232
SmlI	CTYRAG	1 cut(s)	797
SmoI	CTYRAG	1 cut(s)	797
SseBI	AGGCCT	1 cut(s)	1563
SsiI	CCGC	4 cut(s)	1361, 1487, 1574, 2588
SspI	AATATT	2 cut(s)	656, 1110
SspMI	CTAG	6 cut(s)	263, 668, 1013, 1139, 1886, 2375
StuI	AGGCCT	1 cut(s)	1563
StyD4I	CCNGG	2 cut(s)	88, 404
StyI	CCWWGG	2 cut(s)	2029, 2218
TaaI	ACNGT	6 cut(s)	205, 322, 1830, 2108, 2517, 2650
TaiI	ACGT	1 cut(s)	2141
TaqI	TCGA	6 cut(s)	196, 221, 759, 1807, 2190, 2561
TatI	WGTACW	5 cut(s)	300, 698, 1240, 1623, 2654
TauI	GCSGC	2 cut(s)	1577, 2591
TfiI	GAWTC	4 cut(s)	166, 193, 370, 1092
TscAI	CASTG	4 cut(s)	835, 1848, 1906, 2434
TseFI	GTSAC	1 cut(s)	1891
TseI	GCWGC	9 cut(s)	491, 926, 1294, 1543, 1784, 2094, 2393, 2396, 2434
Tsp45I	GTSAC	1 cut(s)	1891
TspDTI	ATGAA	9 cut(s)	444, 588, 618, 960, 1274, 2513, 2690, 2693, 2705
TspGWI	ACGGA	3 cut(s)	540, 2333, 2429
TspRI	CASTG	4 cut(s)	835, 1848, 1906, 2434
Van91I	CCANNNNNTGG	1 cut(s)	1129
VneI	GTGCAC	1 cut(s)	1080
VpaK11BI	GGWCC	3 cut(s)	92, 1450, 2026
XapI	RAATTY	9 cut(s)	186, 258, 278, 783, 937, 947, 1640, 2192, 2680
XbaI	TCTAGA	1 cut(s)	262
XceI	RCATGY	3 cut(s)	440, 1048, 1617
XmnI	GAANNNNTTC	3 cut(s)	1421, 2471, 2493
XspI	CTAG	6 cut(s)	263, 668, 1013, 1139, 1886, 2375
ZrmI	AGTACT	1 cut(s)	302
Zsp2I	ATGCAT	1 cut(s)	2461

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.