Prupe.4G109100_v2.0.a1

Zinc finger protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
5714789 .. 5721619
6831 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G109100.1

Sequence Viewer

Length: 1518 bp
ATGGAAGGAGGTATTGGTGGTAGCCAAAGCAAAGACCAAAATCAAATCGTGGATGTGAGGTCGGTGGTCGAATCCGTCTCCGCCGAAGACTCCGACGCCCCTCTCTACCAAGTCGAAAGCCTCTGCATGCGTTGCGGCGAAAACGGCACTACCAGTTTTCTGCTGACTCTAATTCCTCACTTCAGAAAGATTTTGTTGTCTGCGTTTGAGTGTCCGCATTGCAATGAGAGGAATAACGAAGTTCAGTTTGCTGGTGAGCTCCAACCGAAGGGTTGTTGCTACCAGTTGAAAGTGCCTTCCGGGGACCCCAAGATGCTTAATCGACAAGTGGTGAAATCTGAGTTTGCTACTATTAAGATTCCTGAATTAGATTTTGAGATCCCTCCAGAGTCTCAGCGTGGATCTCTGTCAACGGTGGAAGGTATATTGTTACGAGCAGCGGATGAATTGCAGGCACTCCAAGAAGAACGCAAGAAAGTGGACCCTCAGACAGCTGAAGCAATAGACCAGTTTTTGTTGAAGCTGAGAGCCTGTGCTACAGCAGATTCATCCTTCACCTTCATCCTTGATGATCCAGCTGGAAACAGCTTTGTTGAGAACCTGTTTGCTCCATCCCCTGATCCATCTTTGAGTATCAAGTTTTATGAACGAACGTCAGAGCAACAATCAACATTAGGGTATGTTGTGGAATCGTCACAAACGGGAAGTGTTCGTGAAGCAGCATCAACAGAAGCAGTTGGTACTTCTGACCAAGTACAAAGAGCCCCACATGGATCAATTGGAGCAGCAGCAGGTCATCGGGCCATTGCTCAGAGTAATAGTGCAGAAATTGCTGAATCTTTGTTTCGATACACGGCTCCAGAGGAGGTGATGACTTTCCCATCAACATGTGGAGTTTGCACTGCAAGGTGTGAGACTCGAATGTTTGTCACCAACATTCCATACTTCCAAGAAGTAATTGTCATGGCATCCACTTGTGACGCTTGCGGTTATCGCAATTCTGAGTTGAAGCCTGGTGGACGAGTTCCTGAGAAAGGGAAGAAAATTATTCTCCGTGTGGAGAATGTTAAGGATCTTAGTCGTGATGTAATAAAGTCAGATACTGCAAGCGTGACAATTCCAGAAATTGAGTTGGAGCTGACGAGTGGCACTCTGGGAGGGGTTGTTACAACTGTTGAAGGCTTGATCATGAAAATCAGTGAAAGCCTTGAGAGGGTACATGGATTTAGTTTTGGTGATAGTATTGATGAGCATAAGAGAAGCAAGTGGCTCAACTTTCAAGCAAGCCTAAAGAAGCTTTTGTGTTTAGAAGAGCCTTGGAATTTAATTCTTGATGATGCATTGGCTAATTCTTTTGTTGCACCGGGAACTGACGATATCAAAGATGACCATCAGTTGATGTTTGAGGAATATGAGAGGTCATGGGAGCAAAATGAGGAATTGGGTCTGAATGACATCGATACCTCTTCCGCCGATGCTGCTTATGACTCTAAGGATGCGACTACAGAAGAGAAGTAA

Protein Analysis

506

Amino Acids

55.46

Weight (kDa)

4.63

Isoelectric Point (pI)

45.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 782
AciI CCGC 6 cut(s) 81, 135, 215, 440, 987, 1470
AclWI GGATC 6 cut(s) 373, 409, 566, 614, 781, 1080
AcsI RAATTY 1 cut(s) 1321
AcuI CTGAAG 2 cut(s) 166, 516
AcyI GRCGYC 1 cut(s) 96
AfaI GTAC 3 cut(s) 742, 756, 1218
AfiI CCNNNNNNNGG 3 cut(s) 268, 1034, 1213
AflIII ACRYGT 1 cut(s) 887
AgsI TTSAA 5 cut(s) 289, 520, 1009, 1178, 1280
AjnI CCWGG 1 cut(s) 1012
AjuI GAANNNNNNNTTGG 1 cut(s) 29
AluBI AGCT 7 cut(s) 259, 494, 523, 578, 588, 1138, 1297
AluI AGCT 7 cut(s) 259, 494, 523, 578, 588, 1138, 1297
Alw21I GWGCWC 1 cut(s) 261
Alw26I GTCTC 3 cut(s) 82, 396, 908
AlwI GGATC 6 cut(s) 373, 409, 566, 614, 781, 1080
AlwNI CAGNNNCTG 1 cut(s) 1103
AoxI GGCC 1 cut(s) 801
ApeKI GCWGC 5 cut(s) 437, 719, 785, 788, 1478
ApoI RAATTY 1 cut(s) 1321
AspS9I GGNCC 3 cut(s) 304, 481, 801
AsuC2I CCSGG 2 cut(s) 301, 1365
AsuHPI GGTGA 6 cut(s) 266, 343, 547, 880, 922, 1247
AvaII GGWCC 2 cut(s) 304, 481
BanII GRGCYC 2 cut(s) 261, 766
BbsI GAAGAC 1 cut(s) 93
Bbv12I GWGCWC 1 cut(s) 261
BbvI GCAGC 5 cut(s) 449, 731, 797, 800, 1465
BccI CCATC 4 cut(s) 619, 631, 889, 1398
BceAI ACGGC 2 cut(s) 160, 870
BciT130I CCWGG 1 cut(s) 1014
BclI TGATCA 1 cut(s) 1185
BcnI CCSGG 2 cut(s) 301, 1365
BcoDI GTCTC 3 cut(s) 82, 396, 908
BfmI CTRYAG 2 cut(s) 537, 1503
BfuAI ACCTGC 1 cut(s) 782
BisI GCNGC 6 cut(s) 136, 438, 720, 786, 789, 1479
BlsI GCNGC 6 cut(s) 137, 439, 721, 787, 790, 1480
Bme1390I CCNGG 3 cut(s) 301, 1014, 1365
Bme18I GGWCC 2 cut(s) 304, 481
BmgT120I GGNCC 3 cut(s) 304, 481, 801
BmiI GGNNCC 4 cut(s) 305, 306, 483, 858
BmrFI CCNGG 3 cut(s) 301, 1014, 1365
BmsI GCATC 6 cut(s) 303, 731, 977, 1327, 1465, 1486
BpiI GAAGAC 1 cut(s) 93
BplI GAGNNNNNCTC 2 cut(s) 1135, 1167
BpmI CTGGAG 2 cut(s) 369, 843
BpuEI CTTGAG 1 cut(s) 1229
BpuMI CCSGG 2 cut(s) 301, 1365
Bsa29I ATCGAT 1 cut(s) 1458
BsaBI GATNNNNATC 1 cut(s) 1389
BsaHI GRCGYC 1 cut(s) 96
BsaJI CCNNGG 2 cut(s) 300, 1316
BsaXI ACNNNNNCTCC 2 cut(s) 1149, 1179
Bsc4I CCNNNNNNNGG 3 cut(s) 268, 1034, 1213
Bse1I ACTGG 3 cut(s) 153, 283, 508
Bse3DI GCAATG 3 cut(s) 217, 229, 804
Bse8I GATNNNNATC 1 cut(s) 1389
BseBI CCWGG 1 cut(s) 1014
BseCI ATCGAT 1 cut(s) 1458
BseDI CCNNGG 2 cut(s) 300, 1316
BseGI GGATG 7 cut(s) 58, 448, 548, 561, 611, 968, 1501
BseJI GATNNNNATC 1 cut(s) 1389
BseLI CCNNNNNNNGG 3 cut(s) 268, 1034, 1213
BseMI GCAATG 3 cut(s) 217, 229, 804
BseMII CTCAG 7 cut(s) 330, 407, 500, 515, 824, 993, 1020
BseNI ACTGG 3 cut(s) 153, 283, 508
BseRI GAGGAG 1 cut(s) 878
BseXI GCAGC 5 cut(s) 449, 731, 797, 800, 1465
BsgI GTGCAG 1 cut(s) 843
BshFI GGCC 1 cut(s) 803
BshVI ATCGAT 1 cut(s) 1458
BsiHKAI GWGCWC 1 cut(s) 261
BsiSI CCGG 2 cut(s) 300, 1364
BslFI GGGAC 1 cut(s) 317
BslI CCNNNNNNNGG 3 cut(s) 268, 1034, 1213
BsmAI GTCTC 3 cut(s) 82, 396, 908
BsmBI CGTCTC 1 cut(s) 82
BsmFI GGGAC 1 cut(s) 317
BsnI GGCC 1 cut(s) 803
Bsp1286I GDGCHC 2 cut(s) 261, 766
Bsp143I GATC 7 cut(s) 378, 401, 571, 619, 773, 1072, 1185
BspACI CCGC 6 cut(s) 81, 135, 215, 440, 987, 1470
BspANI GGCC 1 cut(s) 803
BspCNI CTCAG 7 cut(s) 331, 406, 499, 516, 823, 994, 1021
BspDI ATCGAT 1 cut(s) 1458
BspHI TCATGA 1 cut(s) 1188
BspLI GGNNCC 4 cut(s) 305, 306, 483, 858
BspMI ACCTGC 1 cut(s) 782
BspPI GGATC 6 cut(s) 373, 409, 566, 614, 781, 1080
BspQI GCTCTTC 1 cut(s) 1305
BsrDI GCAATG 3 cut(s) 217, 229, 804
BsrI ACTGG 3 cut(s) 153, 283, 508
BssECI CCNNGG 2 cut(s) 300, 1316
BssMI GATC 7 cut(s) 378, 401, 571, 619, 773, 1072, 1185
BssNI GRCGYC 1 cut(s) 96
BssT1I CCWWGG 1 cut(s) 1316
Bst2UI CCWGG 1 cut(s) 1014
Bst4CI ACNGT 2 cut(s) 415, 1174
Bst6I CTCTTC 3 cut(s) 1305, 1471, 1503
BstACI GRCGYC 1 cut(s) 96
BstAPI GCANNNNNTGC 2 cut(s) 132, 830
BstC8I GCNNGC 5 cut(s) 128, 453, 985, 1108, 1285
BstDEI CTNAG 9 cut(s) 339, 393, 486, 524, 810, 1002, 1029, 1076, 1491
BstENI CCTNNNNNAGG 1 cut(s) 1032
BstF5I GGATG 7 cut(s) 58, 448, 548, 561, 611, 968, 1501
BstKTI GATC 7 cut(s) 381, 404, 574, 622, 776, 1075, 1188
BstMAI GTCTC 3 cut(s) 82, 396, 908
BstMBI GATC 7 cut(s) 378, 401, 571, 619, 773, 1072, 1185
BstMWI GCNNNNNNNGC 5 cut(s) 132, 144, 830, 993, 1478
BstNI CCWGG 1 cut(s) 1014
BstNSI RCATGY 2 cut(s) 130, 891
BstSCI CCNGG 3 cut(s) 299, 1012, 1363
BstSFI CTRYAG 2 cut(s) 537, 1503
BstV1I GCAGC 5 cut(s) 449, 731, 797, 800, 1465
BstV2I GAAGAC 1 cut(s) 93
BstX2I RGATCY 3 cut(s) 378, 401, 1072
BstYI RGATCY 3 cut(s) 378, 401, 1072
Bsu15I ATCGAT 1 cut(s) 1458
BsuRI GGCC 1 cut(s) 803
BsuTUI ATCGAT 1 cut(s) 1458
BtsCI GGATG 7 cut(s) 58, 448, 548, 561, 611, 968, 1501
BtsI GCAGTG 1 cut(s) 900
BtsIMutI CAGTG 2 cut(s) 900, 1204
BveI ACCTGC 1 cut(s) 782
Cac8I GCNNGC 5 cut(s) 128, 453, 985, 1108, 1285
CaiI CAGNNNCTG 1 cut(s) 1103
CciI TCATGA 1 cut(s) 1188
Cfr13I GGNCC 3 cut(s) 304, 481, 801
ClaI ATCGAT 1 cut(s) 1458
CseI GACGC 2 cut(s) 104, 989
Csp6I GTAC 3 cut(s) 741, 755, 1217
CviAII CATG 7 cut(s) 127, 770, 888, 964, 1189, 1220, 1422
CviQI GTAC 3 cut(s) 741, 755, 1217
DdeI CTNAG 9 cut(s) 339, 393, 486, 524, 810, 1002, 1029, 1076, 1491
DpnI GATC 7 cut(s) 380, 403, 573, 621, 775, 1074, 1187
DpnII GATC 7 cut(s) 378, 401, 571, 619, 773, 1072, 1185
Eam1104I CTCTTC 3 cut(s) 1305, 1471, 1503
EarI CTCTTC 3 cut(s) 1305, 1471, 1503
EciI GGCGGA 2 cut(s) 70, 1459
Ecl136II GAGCTC 1 cut(s) 259
Eco130I CCWWGG 1 cut(s) 1316
Eco24I GRGCYC 2 cut(s) 261, 766
Eco32I GATATC 1 cut(s) 1378
Eco47I GGWCC 2 cut(s) 304, 481
Eco53kI GAGCTC 1 cut(s) 259
Eco57I CTGAAG 2 cut(s) 166, 516
EcoICRI GAGCTC 1 cut(s) 259
EcoNI CCTNNNNNAGG 1 cut(s) 1032
EcoO109I RGGNCCY 1 cut(s) 304
EcoRII CCWGG 1 cut(s) 1012
EcoRV GATATC 1 cut(s) 1378
EcoT14I CCWWGG 1 cut(s) 1316
EcoT22I ATGCAT 1 cut(s) 1342
EcoT38I GRGCYC 2 cut(s) 261, 766
ErhI CCWWGG 1 cut(s) 1316
Esp3I CGTCTC 1 cut(s) 82
FaeI CATG 7 cut(s) 130, 773, 891, 967, 1192, 1223, 1425
FaqI GGGAC 1 cut(s) 317
FatI CATG 7 cut(s) 126, 769, 887, 963, 1188, 1219, 1421
FbaI TGATCA 1 cut(s) 1185
Fnu4HI GCNGC 6 cut(s) 136, 438, 720, 786, 789, 1479
FokI GGATG 7 cut(s) 65, 455, 535, 548, 598, 955, 1508
FriOI GRGCYC 2 cut(s) 261, 766
Fsp4HI GCNGC 6 cut(s) 136, 438, 720, 786, 789, 1479
GluI GCNGC 6 cut(s) 136, 438, 720, 786, 789, 1479
GsuI CTGGAG 2 cut(s) 369, 843
HaeIII GGCC 1 cut(s) 803
HapII CCGG 2 cut(s) 300, 1364
HgaI GACGC 2 cut(s) 104, 989
Hin1I GRCGYC 1 cut(s) 96
Hin1II CATG 7 cut(s) 130, 773, 891, 967, 1192, 1223, 1425
HincII GTYRAC 1 cut(s) 411
HindII GTYRAC 1 cut(s) 411
HindIII AAGCTT 1 cut(s) 1295
HpaII CCGG 2 cut(s) 300, 1364
HphI GGTGA 6 cut(s) 266, 343, 547, 880, 922, 1247
Hpy166II GTNNAC 3 cut(s) 411, 481, 1019
Hpy188III TCNNGA 9 cut(s) 362, 386, 713, 860, 1028, 1082, 1121, 1189, 1331
Hpy8I GTNNAC 3 cut(s) 411, 481, 1019
Hpy99I CGWCG 1 cut(s) 98
HpyAV CCTTC 6 cut(s) 262, 306, 413, 562, 568, 1172
HpyCH4III ACNGT 2 cut(s) 415, 1174
HpyCH4IV ACGT 1 cut(s) 653
HpyCH4V TGCA 9 cut(s) 126, 222, 451, 824, 900, 905, 1106, 1340, 1361
HpyF10VI GCNNNNNNNGC 5 cut(s) 132, 144, 830, 993, 1478
HpyF3I CTNAG 9 cut(s) 339, 393, 486, 524, 810, 1002, 1029, 1076, 1491
HpySE526I ACGT 1 cut(s) 653
Hsp92I GRCGYC 1 cut(s) 96
Hsp92II CATG 7 cut(s) 130, 773, 891, 967, 1192, 1223, 1425
KflI GGGWCCC 1 cut(s) 304
Ksp22I TGATCA 1 cut(s) 1185
Kzo9I GATC 7 cut(s) 378, 401, 571, 619, 773, 1072, 1185
LguI GCTCTTC 1 cut(s) 1305
LmnI GCTCC 6 cut(s) 264, 613, 782, 862, 1135, 1426
Lsp1109I GCAGC 5 cut(s) 449, 731, 797, 800, 1465
LweI GCATC 6 cut(s) 303, 731, 977, 1327, 1465, 1486
MaeII ACGT 1 cut(s) 653
MaeIII GTNAC 6 cut(s) 429, 693, 928, 977, 1111, 1165
MalI GATC 7 cut(s) 380, 403, 573, 621, 775, 1074, 1187
MboI GATC 7 cut(s) 378, 401, 571, 619, 773, 1072, 1185
MboII GAAGA 5 cut(s) 98, 476, 1051, 1322, 1458
MfeI CAATTG 1 cut(s) 777
MflI RGATCY 3 cut(s) 378, 401, 1072
MhlI GDGCHC 2 cut(s) 261, 766
MlyI GAGTC 5 cut(s) 83, 160, 398, 910, 1481
MmeI TCCRAC 3 cut(s) 117, 286, 1113
Mph1103I ATGCAT 1 cut(s) 1342
MseI TTAA 4 cut(s) 318, 354, 1068, 1325
MslI CAYNNNNRTG 2 cut(s) 222, 886
MspA1I CMGCKG 3 cut(s) 440, 494, 578
MspI CCGG 2 cut(s) 300, 1364
MspR9I CCNGG 3 cut(s) 301, 1014, 1365
MunI CAATTG 1 cut(s) 777
MvaI CCWGG 1 cut(s) 1014
MwoI GCNNNNNNNGC 5 cut(s) 132, 144, 830, 993, 1478
NciI CCSGG 2 cut(s) 301, 1365
NdeII GATC 7 cut(s) 378, 401, 571, 619, 773, 1072, 1185
NlaIII CATG 7 cut(s) 130, 773, 891, 967, 1192, 1223, 1425
NlaIV GGNNCC 4 cut(s) 305, 306, 483, 858
NmuCI GTSAC 4 cut(s) 693, 928, 977, 1111
NsiI ATGCAT 1 cut(s) 1342
NspI RCATGY 2 cut(s) 130, 891
PaeI GCATGC 1 cut(s) 130
PagI TCATGA 1 cut(s) 1188
PciI ACATGT 1 cut(s) 887
PciSI GCTCTTC 1 cut(s) 1305
PfeI GAWTC 5 cut(s) 71, 358, 545, 689, 836
PkrI GCNGC 6 cut(s) 137, 439, 721, 787, 790, 1480
PleI GAGTC 5 cut(s) 83, 160, 397, 910, 1481
PpsI GAGTC 5 cut(s) 83, 160, 397, 910, 1481
PpuMI RGGWCCY 1 cut(s) 304
PscI ACATGT 1 cut(s) 887
Psp124BI GAGCTC 1 cut(s) 261
Psp5II RGGWCCY 1 cut(s) 304
Psp6I CCWGG 1 cut(s) 1012
PspGI CCWGG 1 cut(s) 1012
PspN4I GGNNCC 4 cut(s) 305, 306, 483, 858
PspPI GGNCC 3 cut(s) 304, 481, 801
PspPPI RGGWCCY 1 cut(s) 304
PstNI CAGNNNCTG 1 cut(s) 1103
PsuI RGATCY 3 cut(s) 378, 401, 1072
PvuII CAGCTG 2 cut(s) 494, 578
RsaI GTAC 3 cut(s) 742, 756, 1218
RsaNI GTAC 3 cut(s) 741, 755, 1217
RseI CAYNNNNRTG 2 cut(s) 222, 886
SacI GAGCTC 1 cut(s) 261
SapI GCTCTTC 1 cut(s) 1305
SaqAI TTAA 4 cut(s) 318, 354, 1068, 1325
SatI GCNGC 6 cut(s) 136, 438, 720, 786, 789, 1479
Sau3AI GATC 7 cut(s) 378, 401, 571, 619, 773, 1072, 1185
Sau96I GGNCC 3 cut(s) 304, 481, 801
SchI GAGTC 5 cut(s) 83, 160, 398, 910, 1481
ScrFI CCNGG 3 cut(s) 301, 1014, 1365
SduI GDGCHC 2 cut(s) 261, 766
SfaNI GCATC 6 cut(s) 303, 731, 977, 1327, 1465, 1486
SfcI CTRYAG 2 cut(s) 537, 1503
SinI GGWCC 2 cut(s) 304, 481
SmiMI CAYNNNNRTG 2 cut(s) 222, 886
SmlI CTYRAG 1 cut(s) 1208
SmoI CTYRAG 1 cut(s) 1208
SphI GCATGC 1 cut(s) 130
SsiI CCGC 6 cut(s) 81, 135, 215, 440, 987, 1470
SstI GAGCTC 1 cut(s) 261
StyD4I CCNGG 3 cut(s) 299, 1012, 1363
StyI CCWWGG 1 cut(s) 1316
TaaI ACNGT 2 cut(s) 415, 1174
TaiI ACGT 1 cut(s) 656
TaqI TCGA 6 cut(s) 69, 114, 322, 847, 919, 1458
TatI WGTACW 1 cut(s) 754
TauI GCSGC 1 cut(s) 138
TfiI GAWTC 5 cut(s) 71, 358, 545, 689, 836
Tru1I TTAA 4 cut(s) 318, 354, 1068, 1325
Tru9I TTAA 4 cut(s) 318, 354, 1068, 1325
TscAI CASTG 2 cut(s) 907, 1204
TseFI GTSAC 4 cut(s) 693, 928, 977, 1111
TseI GCWGC 5 cut(s) 437, 719, 785, 788, 1478
Tsp45I GTSAC 4 cut(s) 693, 928, 977, 1111
TspDTI ATGAA 5 cut(s) 459, 537, 550, 660, 1205
TspGWI ACGGA 2 cut(s) 64, 1043
TspRI CASTG 2 cut(s) 907, 1204
VpaK11BI GGWCC 2 cut(s) 304, 481
XagI CCTNNNNNAGG 1 cut(s) 1032
XapI RAATTY 1 cut(s) 1321
XceI RCATGY 2 cut(s) 130, 891
Zsp2I ATGCAT 1 cut(s) 1342
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.