Zinc finger protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G22480 AT5G37340 AT5G37340 AT5G37340 AT5G37340 |
| fragaria_vesca | FvH4_3g12070 FvH4_3g12070 FvH4_3g12070 |
| malus_domestica | MD05G1254800.v1.1 MD10G1234900.v1.1 |
| prunus_persica | Prupe.4G109100_v2.0.a1 |
| pyrus_communis | pycom05g23280 pycom10g19670 |
| rosa_chinensis | RchiOBHm_Chr5g0019781 |
| rosa_laevigata | RLG00000032469 |
| rosa_multiflora | Rmu_ssc0000062.1_g000029 |
| rosa_roxburghii | Rroxscaffold_1G00058350 |
| rosa_rugosa | Rorug05G0054000 |
| rosa_samantha | Rh2AG311200 Rh5AG144400 Rh5BG143100 Rh5CG154900 Rh5DG143400 |
| rosa_wichuraiana | Rw5G012770 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 782 |
| AciI | CCGC | 6 cut(s) | 81, 135, 215, 440, 987, 1470 |
| AclWI | GGATC | 6 cut(s) | 373, 409, 566, 614, 781, 1080 |
| AcsI | RAATTY | 1 cut(s) | 1321 |
| AcuI | CTGAAG | 2 cut(s) | 166, 516 |
| AcyI | GRCGYC | 1 cut(s) | 96 |
| AfaI | GTAC | 3 cut(s) | 742, 756, 1218 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 268, 1034, 1213 |
| AflIII | ACRYGT | 1 cut(s) | 887 |
| AgsI | TTSAA | 5 cut(s) | 289, 520, 1009, 1178, 1280 |
| AjnI | CCWGG | 1 cut(s) | 1012 |
| AjuI | GAANNNNNNNTTGG | 1 cut(s) | 29 |
| AluBI | AGCT | 7 cut(s) | 259, 494, 523, 578, 588, 1138, 1297 |
| AluI | AGCT | 7 cut(s) | 259, 494, 523, 578, 588, 1138, 1297 |
| Alw21I | GWGCWC | 1 cut(s) | 261 |
| Alw26I | GTCTC | 3 cut(s) | 82, 396, 908 |
| AlwI | GGATC | 6 cut(s) | 373, 409, 566, 614, 781, 1080 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1103 |
| AoxI | GGCC | 1 cut(s) | 801 |
| ApeKI | GCWGC | 5 cut(s) | 437, 719, 785, 788, 1478 |
| ApoI | RAATTY | 1 cut(s) | 1321 |
| AspS9I | GGNCC | 3 cut(s) | 304, 481, 801 |
| AsuC2I | CCSGG | 2 cut(s) | 301, 1365 |
| AsuHPI | GGTGA | 6 cut(s) | 266, 343, 547, 880, 922, 1247 |
| AvaII | GGWCC | 2 cut(s) | 304, 481 |
| BanII | GRGCYC | 2 cut(s) | 261, 766 |
| BbsI | GAAGAC | 1 cut(s) | 93 |
| Bbv12I | GWGCWC | 1 cut(s) | 261 |
| BbvI | GCAGC | 5 cut(s) | 449, 731, 797, 800, 1465 |
| BccI | CCATC | 4 cut(s) | 619, 631, 889, 1398 |
| BceAI | ACGGC | 2 cut(s) | 160, 870 |
| BciT130I | CCWGG | 1 cut(s) | 1014 |
| BclI | TGATCA | 1 cut(s) | 1185 |
| BcnI | CCSGG | 2 cut(s) | 301, 1365 |
| BcoDI | GTCTC | 3 cut(s) | 82, 396, 908 |
| BfmI | CTRYAG | 2 cut(s) | 537, 1503 |
| BfuAI | ACCTGC | 1 cut(s) | 782 |
| BisI | GCNGC | 6 cut(s) | 136, 438, 720, 786, 789, 1479 |
| BlsI | GCNGC | 6 cut(s) | 137, 439, 721, 787, 790, 1480 |
| Bme1390I | CCNGG | 3 cut(s) | 301, 1014, 1365 |
| Bme18I | GGWCC | 2 cut(s) | 304, 481 |
| BmgT120I | GGNCC | 3 cut(s) | 304, 481, 801 |
| BmiI | GGNNCC | 4 cut(s) | 305, 306, 483, 858 |
| BmrFI | CCNGG | 3 cut(s) | 301, 1014, 1365 |
| BmsI | GCATC | 6 cut(s) | 303, 731, 977, 1327, 1465, 1486 |
| BpiI | GAAGAC | 1 cut(s) | 93 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1135, 1167 |
| BpmI | CTGGAG | 2 cut(s) | 369, 843 |
| BpuEI | CTTGAG | 1 cut(s) | 1229 |
| BpuMI | CCSGG | 2 cut(s) | 301, 1365 |
| Bsa29I | ATCGAT | 1 cut(s) | 1458 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1389 |
| BsaHI | GRCGYC | 1 cut(s) | 96 |
| BsaJI | CCNNGG | 2 cut(s) | 300, 1316 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1149, 1179 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 268, 1034, 1213 |
| Bse1I | ACTGG | 3 cut(s) | 153, 283, 508 |
| Bse3DI | GCAATG | 3 cut(s) | 217, 229, 804 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1389 |
| BseBI | CCWGG | 1 cut(s) | 1014 |
| BseCI | ATCGAT | 1 cut(s) | 1458 |
| BseDI | CCNNGG | 2 cut(s) | 300, 1316 |
| BseGI | GGATG | 7 cut(s) | 58, 448, 548, 561, 611, 968, 1501 |
| BseJI | GATNNNNATC | 1 cut(s) | 1389 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 268, 1034, 1213 |
| BseMI | GCAATG | 3 cut(s) | 217, 229, 804 |
| BseMII | CTCAG | 7 cut(s) | 330, 407, 500, 515, 824, 993, 1020 |
| BseNI | ACTGG | 3 cut(s) | 153, 283, 508 |
| BseRI | GAGGAG | 1 cut(s) | 878 |
| BseXI | GCAGC | 5 cut(s) | 449, 731, 797, 800, 1465 |
| BsgI | GTGCAG | 1 cut(s) | 843 |
| BshFI | GGCC | 1 cut(s) | 803 |
| BshVI | ATCGAT | 1 cut(s) | 1458 |
| BsiHKAI | GWGCWC | 1 cut(s) | 261 |
| BsiSI | CCGG | 2 cut(s) | 300, 1364 |
| BslFI | GGGAC | 1 cut(s) | 317 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 268, 1034, 1213 |
| BsmAI | GTCTC | 3 cut(s) | 82, 396, 908 |
| BsmBI | CGTCTC | 1 cut(s) | 82 |
| BsmFI | GGGAC | 1 cut(s) | 317 |
| BsnI | GGCC | 1 cut(s) | 803 |
| Bsp1286I | GDGCHC | 2 cut(s) | 261, 766 |
| Bsp143I | GATC | 7 cut(s) | 378, 401, 571, 619, 773, 1072, 1185 |
| BspACI | CCGC | 6 cut(s) | 81, 135, 215, 440, 987, 1470 |
| BspANI | GGCC | 1 cut(s) | 803 |
| BspCNI | CTCAG | 7 cut(s) | 331, 406, 499, 516, 823, 994, 1021 |
| BspDI | ATCGAT | 1 cut(s) | 1458 |
| BspHI | TCATGA | 1 cut(s) | 1188 |
| BspLI | GGNNCC | 4 cut(s) | 305, 306, 483, 858 |
| BspMI | ACCTGC | 1 cut(s) | 782 |
| BspPI | GGATC | 6 cut(s) | 373, 409, 566, 614, 781, 1080 |
| BspQI | GCTCTTC | 1 cut(s) | 1305 |
| BsrDI | GCAATG | 3 cut(s) | 217, 229, 804 |
| BsrI | ACTGG | 3 cut(s) | 153, 283, 508 |
| BssECI | CCNNGG | 2 cut(s) | 300, 1316 |
| BssMI | GATC | 7 cut(s) | 378, 401, 571, 619, 773, 1072, 1185 |
| BssNI | GRCGYC | 1 cut(s) | 96 |
| BssT1I | CCWWGG | 1 cut(s) | 1316 |
| Bst2UI | CCWGG | 1 cut(s) | 1014 |
| Bst4CI | ACNGT | 2 cut(s) | 415, 1174 |
| Bst6I | CTCTTC | 3 cut(s) | 1305, 1471, 1503 |
| BstACI | GRCGYC | 1 cut(s) | 96 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 132, 830 |
| BstC8I | GCNNGC | 5 cut(s) | 128, 453, 985, 1108, 1285 |
| BstDEI | CTNAG | 9 cut(s) | 339, 393, 486, 524, 810, 1002, 1029, 1076, 1491 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1032 |
| BstF5I | GGATG | 7 cut(s) | 58, 448, 548, 561, 611, 968, 1501 |
| BstKTI | GATC | 7 cut(s) | 381, 404, 574, 622, 776, 1075, 1188 |
| BstMAI | GTCTC | 3 cut(s) | 82, 396, 908 |
| BstMBI | GATC | 7 cut(s) | 378, 401, 571, 619, 773, 1072, 1185 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 132, 144, 830, 993, 1478 |
| BstNI | CCWGG | 1 cut(s) | 1014 |
| BstNSI | RCATGY | 2 cut(s) | 130, 891 |
| BstSCI | CCNGG | 3 cut(s) | 299, 1012, 1363 |
| BstSFI | CTRYAG | 2 cut(s) | 537, 1503 |
| BstV1I | GCAGC | 5 cut(s) | 449, 731, 797, 800, 1465 |
| BstV2I | GAAGAC | 1 cut(s) | 93 |
| BstX2I | RGATCY | 3 cut(s) | 378, 401, 1072 |
| BstYI | RGATCY | 3 cut(s) | 378, 401, 1072 |
| Bsu15I | ATCGAT | 1 cut(s) | 1458 |
| BsuRI | GGCC | 1 cut(s) | 803 |
| BsuTUI | ATCGAT | 1 cut(s) | 1458 |
| BtsCI | GGATG | 7 cut(s) | 58, 448, 548, 561, 611, 968, 1501 |
| BtsI | GCAGTG | 1 cut(s) | 900 |
| BtsIMutI | CAGTG | 2 cut(s) | 900, 1204 |
| BveI | ACCTGC | 1 cut(s) | 782 |
| Cac8I | GCNNGC | 5 cut(s) | 128, 453, 985, 1108, 1285 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1103 |
| CciI | TCATGA | 1 cut(s) | 1188 |
| Cfr13I | GGNCC | 3 cut(s) | 304, 481, 801 |
| ClaI | ATCGAT | 1 cut(s) | 1458 |
| CseI | GACGC | 2 cut(s) | 104, 989 |
| Csp6I | GTAC | 3 cut(s) | 741, 755, 1217 |
| CviAII | CATG | 7 cut(s) | 127, 770, 888, 964, 1189, 1220, 1422 |
| CviQI | GTAC | 3 cut(s) | 741, 755, 1217 |
| DdeI | CTNAG | 9 cut(s) | 339, 393, 486, 524, 810, 1002, 1029, 1076, 1491 |
| DpnI | GATC | 7 cut(s) | 380, 403, 573, 621, 775, 1074, 1187 |
| DpnII | GATC | 7 cut(s) | 378, 401, 571, 619, 773, 1072, 1185 |
| Eam1104I | CTCTTC | 3 cut(s) | 1305, 1471, 1503 |
| EarI | CTCTTC | 3 cut(s) | 1305, 1471, 1503 |
| EciI | GGCGGA | 2 cut(s) | 70, 1459 |
| Ecl136II | GAGCTC | 1 cut(s) | 259 |
| Eco130I | CCWWGG | 1 cut(s) | 1316 |
| Eco24I | GRGCYC | 2 cut(s) | 261, 766 |
| Eco32I | GATATC | 1 cut(s) | 1378 |
| Eco47I | GGWCC | 2 cut(s) | 304, 481 |
| Eco53kI | GAGCTC | 1 cut(s) | 259 |
| Eco57I | CTGAAG | 2 cut(s) | 166, 516 |
| EcoICRI | GAGCTC | 1 cut(s) | 259 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1032 |
| EcoO109I | RGGNCCY | 1 cut(s) | 304 |
| EcoRII | CCWGG | 1 cut(s) | 1012 |
| EcoRV | GATATC | 1 cut(s) | 1378 |
| EcoT14I | CCWWGG | 1 cut(s) | 1316 |
| EcoT22I | ATGCAT | 1 cut(s) | 1342 |
| EcoT38I | GRGCYC | 2 cut(s) | 261, 766 |
| ErhI | CCWWGG | 1 cut(s) | 1316 |
| Esp3I | CGTCTC | 1 cut(s) | 82 |
| FaeI | CATG | 7 cut(s) | 130, 773, 891, 967, 1192, 1223, 1425 |
| FaqI | GGGAC | 1 cut(s) | 317 |
| FatI | CATG | 7 cut(s) | 126, 769, 887, 963, 1188, 1219, 1421 |
| FbaI | TGATCA | 1 cut(s) | 1185 |
| Fnu4HI | GCNGC | 6 cut(s) | 136, 438, 720, 786, 789, 1479 |
| FokI | GGATG | 7 cut(s) | 65, 455, 535, 548, 598, 955, 1508 |
| FriOI | GRGCYC | 2 cut(s) | 261, 766 |
| Fsp4HI | GCNGC | 6 cut(s) | 136, 438, 720, 786, 789, 1479 |
| GluI | GCNGC | 6 cut(s) | 136, 438, 720, 786, 789, 1479 |
| GsuI | CTGGAG | 2 cut(s) | 369, 843 |
| HaeIII | GGCC | 1 cut(s) | 803 |
| HapII | CCGG | 2 cut(s) | 300, 1364 |
| HgaI | GACGC | 2 cut(s) | 104, 989 |
| Hin1I | GRCGYC | 1 cut(s) | 96 |
| Hin1II | CATG | 7 cut(s) | 130, 773, 891, 967, 1192, 1223, 1425 |
| HincII | GTYRAC | 1 cut(s) | 411 |
| HindII | GTYRAC | 1 cut(s) | 411 |
| HindIII | AAGCTT | 1 cut(s) | 1295 |
| HpaII | CCGG | 2 cut(s) | 300, 1364 |
| HphI | GGTGA | 6 cut(s) | 266, 343, 547, 880, 922, 1247 |
| Hpy166II | GTNNAC | 3 cut(s) | 411, 481, 1019 |
| Hpy188III | TCNNGA | 9 cut(s) | 362, 386, 713, 860, 1028, 1082, 1121, 1189, 1331 |
| Hpy8I | GTNNAC | 3 cut(s) | 411, 481, 1019 |
| Hpy99I | CGWCG | 1 cut(s) | 98 |
| HpyAV | CCTTC | 6 cut(s) | 262, 306, 413, 562, 568, 1172 |
| HpyCH4III | ACNGT | 2 cut(s) | 415, 1174 |
| HpyCH4IV | ACGT | 1 cut(s) | 653 |
| HpyCH4V | TGCA | 9 cut(s) | 126, 222, 451, 824, 900, 905, 1106, 1340, 1361 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 132, 144, 830, 993, 1478 |
| HpyF3I | CTNAG | 9 cut(s) | 339, 393, 486, 524, 810, 1002, 1029, 1076, 1491 |
| HpySE526I | ACGT | 1 cut(s) | 653 |
| Hsp92I | GRCGYC | 1 cut(s) | 96 |
| Hsp92II | CATG | 7 cut(s) | 130, 773, 891, 967, 1192, 1223, 1425 |
| KflI | GGGWCCC | 1 cut(s) | 304 |
| Ksp22I | TGATCA | 1 cut(s) | 1185 |
| Kzo9I | GATC | 7 cut(s) | 378, 401, 571, 619, 773, 1072, 1185 |
| LguI | GCTCTTC | 1 cut(s) | 1305 |
| LmnI | GCTCC | 6 cut(s) | 264, 613, 782, 862, 1135, 1426 |
| Lsp1109I | GCAGC | 5 cut(s) | 449, 731, 797, 800, 1465 |
| LweI | GCATC | 6 cut(s) | 303, 731, 977, 1327, 1465, 1486 |
| MaeII | ACGT | 1 cut(s) | 653 |
| MaeIII | GTNAC | 6 cut(s) | 429, 693, 928, 977, 1111, 1165 |
| MalI | GATC | 7 cut(s) | 380, 403, 573, 621, 775, 1074, 1187 |
| MboI | GATC | 7 cut(s) | 378, 401, 571, 619, 773, 1072, 1185 |
| MboII | GAAGA | 5 cut(s) | 98, 476, 1051, 1322, 1458 |
| MfeI | CAATTG | 1 cut(s) | 777 |
| MflI | RGATCY | 3 cut(s) | 378, 401, 1072 |
| MhlI | GDGCHC | 2 cut(s) | 261, 766 |
| MlyI | GAGTC | 5 cut(s) | 83, 160, 398, 910, 1481 |
| MmeI | TCCRAC | 3 cut(s) | 117, 286, 1113 |
| Mph1103I | ATGCAT | 1 cut(s) | 1342 |
| MseI | TTAA | 4 cut(s) | 318, 354, 1068, 1325 |
| MslI | CAYNNNNRTG | 2 cut(s) | 222, 886 |
| MspA1I | CMGCKG | 3 cut(s) | 440, 494, 578 |
| MspI | CCGG | 2 cut(s) | 300, 1364 |
| MspR9I | CCNGG | 3 cut(s) | 301, 1014, 1365 |
| MunI | CAATTG | 1 cut(s) | 777 |
| MvaI | CCWGG | 1 cut(s) | 1014 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 132, 144, 830, 993, 1478 |
| NciI | CCSGG | 2 cut(s) | 301, 1365 |
| NdeII | GATC | 7 cut(s) | 378, 401, 571, 619, 773, 1072, 1185 |
| NlaIII | CATG | 7 cut(s) | 130, 773, 891, 967, 1192, 1223, 1425 |
| NlaIV | GGNNCC | 4 cut(s) | 305, 306, 483, 858 |
| NmuCI | GTSAC | 4 cut(s) | 693, 928, 977, 1111 |
| NsiI | ATGCAT | 1 cut(s) | 1342 |
| NspI | RCATGY | 2 cut(s) | 130, 891 |
| PaeI | GCATGC | 1 cut(s) | 130 |
| PagI | TCATGA | 1 cut(s) | 1188 |
| PciI | ACATGT | 1 cut(s) | 887 |
| PciSI | GCTCTTC | 1 cut(s) | 1305 |
| PfeI | GAWTC | 5 cut(s) | 71, 358, 545, 689, 836 |
| PkrI | GCNGC | 6 cut(s) | 137, 439, 721, 787, 790, 1480 |
| PleI | GAGTC | 5 cut(s) | 83, 160, 397, 910, 1481 |
| PpsI | GAGTC | 5 cut(s) | 83, 160, 397, 910, 1481 |
| PpuMI | RGGWCCY | 1 cut(s) | 304 |
| PscI | ACATGT | 1 cut(s) | 887 |
| Psp124BI | GAGCTC | 1 cut(s) | 261 |
| Psp5II | RGGWCCY | 1 cut(s) | 304 |
| Psp6I | CCWGG | 1 cut(s) | 1012 |
| PspGI | CCWGG | 1 cut(s) | 1012 |
| PspN4I | GGNNCC | 4 cut(s) | 305, 306, 483, 858 |
| PspPI | GGNCC | 3 cut(s) | 304, 481, 801 |
| PspPPI | RGGWCCY | 1 cut(s) | 304 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1103 |
| PsuI | RGATCY | 3 cut(s) | 378, 401, 1072 |
| PvuII | CAGCTG | 2 cut(s) | 494, 578 |
| RsaI | GTAC | 3 cut(s) | 742, 756, 1218 |
| RsaNI | GTAC | 3 cut(s) | 741, 755, 1217 |
| RseI | CAYNNNNRTG | 2 cut(s) | 222, 886 |
| SacI | GAGCTC | 1 cut(s) | 261 |
| SapI | GCTCTTC | 1 cut(s) | 1305 |
| SaqAI | TTAA | 4 cut(s) | 318, 354, 1068, 1325 |
| SatI | GCNGC | 6 cut(s) | 136, 438, 720, 786, 789, 1479 |
| Sau3AI | GATC | 7 cut(s) | 378, 401, 571, 619, 773, 1072, 1185 |
| Sau96I | GGNCC | 3 cut(s) | 304, 481, 801 |
| SchI | GAGTC | 5 cut(s) | 83, 160, 398, 910, 1481 |
| ScrFI | CCNGG | 3 cut(s) | 301, 1014, 1365 |
| SduI | GDGCHC | 2 cut(s) | 261, 766 |
| SfaNI | GCATC | 6 cut(s) | 303, 731, 977, 1327, 1465, 1486 |
| SfcI | CTRYAG | 2 cut(s) | 537, 1503 |
| SinI | GGWCC | 2 cut(s) | 304, 481 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 222, 886 |
| SmlI | CTYRAG | 1 cut(s) | 1208 |
| SmoI | CTYRAG | 1 cut(s) | 1208 |
| SphI | GCATGC | 1 cut(s) | 130 |
| SsiI | CCGC | 6 cut(s) | 81, 135, 215, 440, 987, 1470 |
| SstI | GAGCTC | 1 cut(s) | 261 |
| StyD4I | CCNGG | 3 cut(s) | 299, 1012, 1363 |
| StyI | CCWWGG | 1 cut(s) | 1316 |
| TaaI | ACNGT | 2 cut(s) | 415, 1174 |
| TaiI | ACGT | 1 cut(s) | 656 |
| TaqI | TCGA | 6 cut(s) | 69, 114, 322, 847, 919, 1458 |
| TatI | WGTACW | 1 cut(s) | 754 |
| TauI | GCSGC | 1 cut(s) | 138 |
| TfiI | GAWTC | 5 cut(s) | 71, 358, 545, 689, 836 |
| Tru1I | TTAA | 4 cut(s) | 318, 354, 1068, 1325 |
| Tru9I | TTAA | 4 cut(s) | 318, 354, 1068, 1325 |
| TscAI | CASTG | 2 cut(s) | 907, 1204 |
| TseFI | GTSAC | 4 cut(s) | 693, 928, 977, 1111 |
| TseI | GCWGC | 5 cut(s) | 437, 719, 785, 788, 1478 |
| Tsp45I | GTSAC | 4 cut(s) | 693, 928, 977, 1111 |
| TspDTI | ATGAA | 5 cut(s) | 459, 537, 550, 660, 1205 |
| TspGWI | ACGGA | 2 cut(s) | 64, 1043 |
| TspRI | CASTG | 2 cut(s) | 907, 1204 |
| VpaK11BI | GGWCC | 2 cut(s) | 304, 481 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1032 |
| XapI | RAATTY | 1 cut(s) | 1321 |
| XceI | RCATGY | 2 cut(s) | 130, 891 |
| Zsp2I | ATGCAT | 1 cut(s) | 1342 |