The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G16470 AT1G16470 AT1G79210 AT1G79210 AT1G79210 |
| fragaria_vesca | FvH4_3g12361 FvH4_3g12361 |
| malus_domestica | MD05G1224600.v1.1 MD10G1206300.v1.1 |
| prunus_persica | Prupe.4G112500_v2.0.a1 Prupe.4G112500_v2.0.a1 Prupe.4G136000_v2.0.a1 Prupe.4G136000_v2.0.a1 Prupe.4G136000_v2.0.a1 Prupe.4G136000_v2.0.a1 Prupe.4G136000_v2.0.a1 |
| pyrus_communis | pycom05g20720 pycom10g17610 |
| rosa_chinensis | RchiOBHm_Chr5g0020171 |
| rosa_multiflora | Rmu_co8147062.1_g000001 Rmu_sc0000116.1_g000003 Rmu_sc0002087.1_g000016 |
| rosa_roxburghii | Rroxscaffold_1G00058040 |
| rosa_samantha | Rh5BG147300 Rh5CG158700 |
| rosa_wichuraiana | Rw5G013060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 218 |
| AccI | GTMKAC | 1 cut(s) | 536 |
| AciI | CCGC | 2 cut(s) | 347, 429 |
| AclWI | GGATC | 2 cut(s) | 122, 446 |
| AcsI | RAATTY | 1 cut(s) | 656 |
| AcuI | CTGAAG | 3 cut(s) | 33, 441, 608 |
| AfaI | GTAC | 1 cut(s) | 17 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 111, 218 |
| AgsI | TTSAA | 3 cut(s) | 165, 602, 686 |
| AjnI | CCWGG | 1 cut(s) | 444 |
| AluBI | AGCT | 3 cut(s) | 58, 122, 157 |
| AluI | AGCT | 3 cut(s) | 58, 122, 157 |
| Alw21I | GWGCWC | 2 cut(s) | 75, 570 |
| Alw26I | GTCTC | 1 cut(s) | 508 |
| Alw44I | GTGCAC | 1 cut(s) | 566 |
| AlwI | GGATC | 2 cut(s) | 122, 446 |
| AoxI | GGCC | 3 cut(s) | 97, 386, 430 |
| ApaLI | GTGCAC | 1 cut(s) | 566 |
| ApeKI | GCWGC | 1 cut(s) | 122 |
| ApoI | RAATTY | 1 cut(s) | 656 |
| AspS9I | GGNCC | 3 cut(s) | 97, 242, 431 |
| AsuHPI | GGTGA | 1 cut(s) | 22 |
| AsuII | TTCGAA | 1 cut(s) | 265 |
| AvaII | GGWCC | 1 cut(s) | 242 |
| BaeGI | GKGCMC | 1 cut(s) | 570 |
| BauI | CACGAG | 1 cut(s) | 472 |
| Bbv12I | GWGCWC | 2 cut(s) | 75, 570 |
| BbvI | GCAGC | 1 cut(s) | 109 |
| BceAI | ACGGC | 1 cut(s) | 588 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 75, 109 |
| BciT130I | CCWGG | 1 cut(s) | 446 |
| BcoDI | GTCTC | 1 cut(s) | 508 |
| BfaI | CTAG | 1 cut(s) | 59 |
| BisI | GCNGC | 3 cut(s) | 123, 348, 430 |
| BlsI | GCNGC | 3 cut(s) | 124, 349, 431 |
| BmcAI | AGTACT | 1 cut(s) | 17 |
| Bme1390I | CCNGG | 1 cut(s) | 446 |
| Bme18I | GGWCC | 1 cut(s) | 242 |
| BmgT120I | GGNCC | 3 cut(s) | 97, 242, 431 |
| BmiI | GGNNCC | 3 cut(s) | 243, 312, 433 |
| BmrFI | CCNGG | 1 cut(s) | 446 |
| BmsI | GCATC | 2 cut(s) | 191, 550 |
| Bpu14I | TTCGAA | 1 cut(s) | 265 |
| BpuEI | CTTGAG | 1 cut(s) | 545 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 111, 218 |
| Bse3DI | GCAATG | 1 cut(s) | 495 |
| BseBI | CCWGG | 1 cut(s) | 446 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 111, 218 |
| BseMI | GCAATG | 1 cut(s) | 495 |
| BseMII | CTCAG | 2 cut(s) | 138, 627 |
| BseSI | GKGCMC | 1 cut(s) | 570 |
| BseXI | GCAGC | 1 cut(s) | 109 |
| BseYI | CCCAGC | 2 cut(s) | 413, 673 |
| BsgI | GTGCAG | 1 cut(s) | 83 |
| BshFI | GGCC | 3 cut(s) | 99, 388, 432 |
| BsiHKAI | GWGCWC | 2 cut(s) | 75, 570 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 111, 218 |
| BsmAI | GTCTC | 1 cut(s) | 508 |
| BsnI | GGCC | 3 cut(s) | 99, 388, 432 |
| Bsp119I | TTCGAA | 1 cut(s) | 265 |
| Bsp1286I | GDGCHC | 2 cut(s) | 75, 570 |
| Bsp143I | GATC | 3 cut(s) | 66, 114, 451 |
| BspACI | CCGC | 2 cut(s) | 347, 429 |
| BspANI | GGCC | 3 cut(s) | 99, 388, 432 |
| BspCNI | CTCAG | 2 cut(s) | 139, 626 |
| BspLI | GGNNCC | 3 cut(s) | 243, 312, 433 |
| BspPI | GGATC | 2 cut(s) | 122, 446 |
| BspT104I | TTCGAA | 1 cut(s) | 265 |
| BsrDI | GCAATG | 1 cut(s) | 495 |
| BssMI | GATC | 3 cut(s) | 66, 114, 451 |
| BssNAI | GTATAC | 1 cut(s) | 537 |
| BssSI | CACGAG | 1 cut(s) | 472 |
| Bst1107I | GTATAC | 1 cut(s) | 537 |
| Bst2BI | CACGAG | 1 cut(s) | 472 |
| Bst2UI | CCWGG | 1 cut(s) | 446 |
| Bst4CI | ACNGT | 2 cut(s) | 11, 233 |
| Bst6I | CTCTTC | 1 cut(s) | 524 |
| BstBI | TTCGAA | 1 cut(s) | 265 |
| BstC8I | GCNNGC | 2 cut(s) | 75, 282 |
| BstDEI | CTNAG | 2 cut(s) | 147, 613 |
| BstKTI | GATC | 3 cut(s) | 69, 117, 454 |
| BstMAI | GTCTC | 1 cut(s) | 508 |
| BstMBI | GATC | 3 cut(s) | 66, 114, 451 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 70, 83 |
| BstNI | CCWGG | 1 cut(s) | 446 |
| BstSCI | CCNGG | 1 cut(s) | 444 |
| BstSLI | GKGCMC | 1 cut(s) | 570 |
| BstV1I | GCAGC | 1 cut(s) | 109 |
| BstZ17I | GTATAC | 1 cut(s) | 537 |
| BsuRI | GGCC | 3 cut(s) | 99, 388, 432 |
| BtsIMutI | CAGTG | 1 cut(s) | 238 |
| Cac8I | GCNNGC | 2 cut(s) | 75, 282 |
| Cfr13I | GGNCC | 3 cut(s) | 97, 242, 431 |
| CsiI | ACCWGGT | 1 cut(s) | 444 |
| Csp6I | GTAC | 1 cut(s) | 16 |
| CviQI | GTAC | 1 cut(s) | 16 |
| DdeI | CTNAG | 2 cut(s) | 147, 613 |
| DpnI | GATC | 3 cut(s) | 68, 116, 453 |
| DpnII | GATC | 3 cut(s) | 66, 114, 451 |
| Eam1104I | CTCTTC | 1 cut(s) | 524 |
| EarI | CTCTTC | 1 cut(s) | 524 |
| Eco147I | AGGCCT | 1 cut(s) | 388 |
| Eco47I | GGWCC | 1 cut(s) | 242 |
| Eco57I | CTGAAG | 3 cut(s) | 33, 441, 608 |
| EcoO109I | RGGNCCY | 1 cut(s) | 242 |
| EcoRII | CCWGG | 1 cut(s) | 444 |
| FaiI | YATR | 8 cut(s) | 239, 304, 306, 356, 442, 466, 537, 548 |
| FblI | GTMKAC | 1 cut(s) | 536 |
| Fnu4HI | GCNGC | 3 cut(s) | 123, 348, 430 |
| Fsp4HI | GCNGC | 3 cut(s) | 123, 348, 430 |
| FspBI | CTAG | 1 cut(s) | 59 |
| GluI | GCNGC | 3 cut(s) | 123, 348, 430 |
| GsaI | CCCAGC | 2 cut(s) | 417, 677 |
| HaeIII | GGCC | 3 cut(s) | 99, 388, 432 |
| HinfI | GANTC | 2 cut(s) | 255, 583 |
| HphI | GGTGA | 1 cut(s) | 22 |
| Hpy166II | GTNNAC | 4 cut(s) | 229, 366, 537, 568 |
| Hpy188I | TCNGA | 2 cut(s) | 588, 662 |
| Hpy188III | TCNNGA | 3 cut(s) | 245, 524, 615 |
| Hpy8I | GTNNAC | 4 cut(s) | 229, 366, 537, 568 |
| HpyAV | CCTTC | 5 cut(s) | 57, 171, 465, 583, 596 |
| HpyCH4III | ACNGT | 2 cut(s) | 11, 233 |
| HpyCH4V | TGCA | 6 cut(s) | 64, 143, 358, 488, 512, 568 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 70, 83 |
| HpyF3I | CTNAG | 2 cut(s) | 147, 613 |
| Kzo9I | GATC | 3 cut(s) | 66, 114, 451 |
| Lsp1109I | GCAGC | 1 cut(s) | 109 |
| LweI | GCATC | 2 cut(s) | 191, 550 |
| MabI | ACCWGGT | 1 cut(s) | 444 |
| MaeI | CTAG | 1 cut(s) | 59 |
| MaeIII | GTNAC | 1 cut(s) | 322 |
| MalI | GATC | 3 cut(s) | 68, 116, 453 |
| MboI | GATC | 3 cut(s) | 66, 114, 451 |
| MboII | GAAGA | 4 cut(s) | 163, 508, 541, 698 |
| MhlI | GDGCHC | 2 cut(s) | 75, 570 |
| MluCI | AATT | 2 cut(s) | 639, 656 |
| MlyI | GAGTC | 2 cut(s) | 264, 577 |
| MnlI | CCTC | 5 cut(s) | 115, 330, 493, 525, 586 |
| MseI | TTAA | 1 cut(s) | 189 |
| MspA1I | CMGCKG | 1 cut(s) | 429 |
| MspR9I | CCNGG | 1 cut(s) | 446 |
| MvaI | CCWGG | 1 cut(s) | 446 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 70, 83 |
| NdeII | GATC | 3 cut(s) | 66, 114, 451 |
| NlaIV | GGNNCC | 3 cut(s) | 243, 312, 433 |
| NspV | TTCGAA | 1 cut(s) | 265 |
| PceI | AGGCCT | 1 cut(s) | 388 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 218 |
| PkrI | GCNGC | 3 cut(s) | 124, 349, 431 |
| PleI | GAGTC | 2 cut(s) | 263, 577 |
| PpsI | GAGTC | 2 cut(s) | 263, 577 |
| PpuMI | RGGWCCY | 1 cut(s) | 242 |
| Psp5II | RGGWCCY | 1 cut(s) | 242 |
| Psp6I | CCWGG | 1 cut(s) | 444 |
| PspFI | CCCAGC | 2 cut(s) | 413, 673 |
| PspGI | CCWGG | 1 cut(s) | 444 |
| PspN4I | GGNNCC | 3 cut(s) | 243, 312, 433 |
| PspPI | GGNCC | 3 cut(s) | 97, 242, 431 |
| PspPPI | RGGWCCY | 1 cut(s) | 242 |
| RsaI | GTAC | 1 cut(s) | 17 |
| RsaNI | GTAC | 1 cut(s) | 16 |
| SaqAI | TTAA | 1 cut(s) | 189 |
| SatI | GCNGC | 3 cut(s) | 123, 348, 430 |
| Sau3AI | GATC | 3 cut(s) | 66, 114, 451 |
| Sau96I | GGNCC | 3 cut(s) | 97, 242, 431 |
| ScaI | AGTACT | 1 cut(s) | 17 |
| SchI | GAGTC | 2 cut(s) | 264, 577 |
| ScrFI | CCNGG | 1 cut(s) | 446 |
| SduI | GDGCHC | 2 cut(s) | 75, 570 |
| SetI | ASST | 8 cut(s) | 60, 107, 124, 159, 163, 450, 463, 536 |
| SexAI | ACCWGGT | 1 cut(s) | 444 |
| SfaNI | GCATC | 2 cut(s) | 191, 550 |
| SfuI | TTCGAA | 1 cut(s) | 265 |
| SinI | GGWCC | 1 cut(s) | 242 |
| SmlI | CTYRAG | 1 cut(s) | 524 |
| SmoI | CTYRAG | 1 cut(s) | 524 |
| Sse9I | AATT | 2 cut(s) | 639, 656 |
| SseBI | AGGCCT | 1 cut(s) | 388 |
| SsiI | CCGC | 2 cut(s) | 347, 429 |
| SspI | AATATT | 2 cut(s) | 217, 625 |
| SspMI | CTAG | 1 cut(s) | 59 |
| StuI | AGGCCT | 1 cut(s) | 388 |
| StyD4I | CCNGG | 1 cut(s) | 444 |
| TaaI | ACNGT | 2 cut(s) | 11, 233 |
| TaqI | TCGA | 3 cut(s) | 69, 253, 265 |
| TasI | AATT | 2 cut(s) | 639, 656 |
| TatI | WGTACW | 1 cut(s) | 15 |
| TauI | GCSGC | 2 cut(s) | 350, 432 |
| Tru1I | TTAA | 1 cut(s) | 189 |
| Tru9I | TTAA | 1 cut(s) | 189 |
| TscAI | CASTG | 1 cut(s) | 238 |
| TseI | GCWGC | 1 cut(s) | 122 |
| TspDTI | ATGAA | 2 cut(s) | 192, 453 |
| TspRI | CASTG | 1 cut(s) | 238 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 218 |
| VneI | GTGCAC | 1 cut(s) | 566 |
| VpaK11BI | GGWCC | 1 cut(s) | 242 |
| XapI | RAATTY | 1 cut(s) | 656 |
| XmiI | GTMKAC | 1 cut(s) | 536 |
| XspI | CTAG | 1 cut(s) | 59 |
| ZrmI | AGTACT | 1 cut(s) | 17 |