The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G16470 AT1G16470 AT1G79210 AT1G79210 AT1G79210 |
| fragaria_vesca | FvH4_3g12361 FvH4_3g12361 |
| malus_domestica | MD05G1224600.v1.1 MD10G1206300.v1.1 |
| prunus_persica | Prupe.4G112500_v2.0.a1 Prupe.4G112500_v2.0.a1 Prupe.4G136000_v2.0.a1 Prupe.4G136000_v2.0.a1 Prupe.4G136000_v2.0.a1 Prupe.4G136000_v2.0.a1 Prupe.4G136000_v2.0.a1 |
| pyrus_communis | pycom05g20720 pycom10g17610 |
| rosa_chinensis | RchiOBHm_Chr5g0020171 |
| rosa_multiflora | Rmu_co8147062.1_g000001 Rmu_sc0000116.1_g000003 Rmu_sc0002087.1_g000016 |
| rosa_roxburghii | Rroxscaffold_1G00058040 |
| rosa_samantha | Rh5BG147300 Rh5CG158700 |
| rosa_wichuraiana | Rw5G013060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 128 |
| AfaI | GTAC | 1 cut(s) | 141 |
| AjnI | CCWGG | 1 cut(s) | 135 |
| AluBI | AGCT | 1 cut(s) | 148 |
| AluI | AGCT | 1 cut(s) | 148 |
| Alw26I | GTCTC | 1 cut(s) | 215 |
| AoxI | GGCC | 1 cut(s) | 77 |
| ApeKI | GCWGC | 1 cut(s) | 38 |
| AspS9I | GGNCC | 1 cut(s) | 122 |
| AvaII | GGWCC | 1 cut(s) | 122 |
| BbvI | GCAGC | 1 cut(s) | 25 |
| BciT130I | CCWGG | 1 cut(s) | 137 |
| BcoDI | GTCTC | 1 cut(s) | 215 |
| BisI | GCNGC | 1 cut(s) | 39 |
| BlsI | GCNGC | 1 cut(s) | 40 |
| Bme1390I | CCNGG | 1 cut(s) | 137 |
| Bme18I | GGWCC | 1 cut(s) | 122 |
| BmgT120I | GGNCC | 1 cut(s) | 122 |
| BmiI | GGNNCC | 1 cut(s) | 124 |
| BmrFI | CCNGG | 1 cut(s) | 137 |
| BmsI | GCATC | 1 cut(s) | 36 |
| BoxI | GACNNNNGTC | 1 cut(s) | 120 |
| Bse3DI | GCAATG | 1 cut(s) | 202 |
| BseBI | CCWGG | 1 cut(s) | 137 |
| BseMI | GCAATG | 1 cut(s) | 202 |
| BseXI | GCAGC | 1 cut(s) | 25 |
| BshFI | GGCC | 1 cut(s) | 79 |
| BslFI | GGGAC | 1 cut(s) | 108 |
| BsmAI | GTCTC | 1 cut(s) | 215 |
| BsmFI | GGGAC | 1 cut(s) | 108 |
| BsnI | GGCC | 1 cut(s) | 79 |
| BspANI | GGCC | 1 cut(s) | 79 |
| BspLI | GGNNCC | 1 cut(s) | 124 |
| BsrDI | GCAATG | 1 cut(s) | 202 |
| Bst2UI | CCWGG | 1 cut(s) | 137 |
| Bst4CI | ACNGT | 1 cut(s) | 119 |
| Bst6I | CTCTTC | 1 cut(s) | 99 |
| BstMAI | GTCTC | 1 cut(s) | 215 |
| BstNI | CCWGG | 1 cut(s) | 137 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 120 |
| BstSCI | CCNGG | 1 cut(s) | 135 |
| BstV1I | GCAGC | 1 cut(s) | 25 |
| BsuRI | GGCC | 1 cut(s) | 79 |
| BtsIMutI | CAGTG | 1 cut(s) | 124 |
| Cfr13I | GGNCC | 1 cut(s) | 122 |
| Csp6I | GTAC | 1 cut(s) | 140 |
| CviAII | CATG | 1 cut(s) | 181 |
| CviJI | RGCY | 3 cut(s) | 79, 148, 189 |
| CviKI_1 | RGCY | 3 cut(s) | 79, 148, 189 |
| CviQI | GTAC | 1 cut(s) | 140 |
| Eam1104I | CTCTTC | 1 cut(s) | 99 |
| EarI | CTCTTC | 1 cut(s) | 99 |
| Eco147I | AGGCCT | 1 cut(s) | 79 |
| Eco47I | GGWCC | 1 cut(s) | 122 |
| Eco57I | CTGAAG | 1 cut(s) | 128 |
| EcoRII | CCWGG | 1 cut(s) | 135 |
| FaeI | CATG | 1 cut(s) | 184 |
| FaiI | YATR | 2 cut(s) | 173, 182 |
| FaqI | GGGAC | 1 cut(s) | 108 |
| FatI | CATG | 1 cut(s) | 180 |
| Fnu4HI | GCNGC | 1 cut(s) | 39 |
| Fsp4HI | GCNGC | 1 cut(s) | 39 |
| GluI | GCNGC | 1 cut(s) | 39 |
| HaeIII | GGCC | 1 cut(s) | 79 |
| Hin1II | CATG | 1 cut(s) | 184 |
| Hpy166II | GTNNAC | 1 cut(s) | 57 |
| Hpy188III | TCNNGA | 1 cut(s) | 231 |
| Hpy8I | GTNNAC | 1 cut(s) | 57 |
| HpyCH4III | ACNGT | 1 cut(s) | 119 |
| HpyCH4V | TGCA | 4 cut(s) | 49, 153, 195, 219 |
| Hsp92II | CATG | 1 cut(s) | 184 |
| LpnPI | CCDG | 6 cut(s) | 24, 51, 83, 90, 122, 149 |
| Lsp1109I | GCAGC | 1 cut(s) | 25 |
| LweI | GCATC | 1 cut(s) | 36 |
| MaeIII | GTNAC | 1 cut(s) | 13 |
| MboII | GAAGA | 1 cut(s) | 86 |
| MnlI | CCTC | 2 cut(s) | 21, 200 |
| MspR9I | CCNGG | 1 cut(s) | 137 |
| MvaI | CCWGG | 1 cut(s) | 137 |
| NlaIII | CATG | 1 cut(s) | 184 |
| NlaIV | GGNNCC | 1 cut(s) | 124 |
| PceI | AGGCCT | 1 cut(s) | 79 |
| PkrI | GCNGC | 1 cut(s) | 40 |
| PshAI | GACNNNNGTC | 1 cut(s) | 120 |
| Psp6I | CCWGG | 1 cut(s) | 135 |
| PspGI | CCWGG | 1 cut(s) | 135 |
| PspN4I | GGNNCC | 1 cut(s) | 124 |
| PspPI | GGNCC | 1 cut(s) | 122 |
| RsaI | GTAC | 1 cut(s) | 141 |
| RsaNI | GTAC | 1 cut(s) | 140 |
| SatI | GCNGC | 1 cut(s) | 39 |
| Sau96I | GGNCC | 1 cut(s) | 122 |
| ScrFI | CCNGG | 1 cut(s) | 137 |
| SetI | ASST | 2 cut(s) | 141, 150 |
| SfaNI | GCATC | 1 cut(s) | 36 |
| SgeI | CNNG | 9 cut(s) | 23, 35, 62, 78, 110, 117, 148, 149, 193 |
| SinI | GGWCC | 1 cut(s) | 122 |
| SseBI | AGGCCT | 1 cut(s) | 79 |
| SspI | AATATT | 1 cut(s) | 157 |
| StuI | AGGCCT | 1 cut(s) | 79 |
| StyD4I | CCNGG | 1 cut(s) | 135 |
| TaaI | ACNGT | 1 cut(s) | 119 |
| TscAI | CASTG | 1 cut(s) | 124 |
| TseI | GCWGC | 1 cut(s) | 38 |
| TspDTI | ATGAA | 2 cut(s) | 160, 169 |
| TspRI | CASTG | 1 cut(s) | 124 |
| VpaK11BI | GGWCC | 1 cut(s) | 122 |