The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G16470 AT1G16470 AT1G79210 AT1G79210 AT1G79210 |
| fragaria_vesca | FvH4_3g12361 FvH4_3g12361 |
| malus_domestica | MD05G1224600.v1.1 MD10G1206300.v1.1 |
| prunus_persica | Prupe.4G112500_v2.0.a1 Prupe.4G112500_v2.0.a1 Prupe.4G136000_v2.0.a1 Prupe.4G136000_v2.0.a1 Prupe.4G136000_v2.0.a1 Prupe.4G136000_v2.0.a1 Prupe.4G136000_v2.0.a1 |
| pyrus_communis | pycom05g20720 pycom10g17610 |
| rosa_chinensis | RchiOBHm_Chr5g0020171 |
| rosa_multiflora | Rmu_co8147062.1_g000001 Rmu_sc0000116.1_g000003 Rmu_sc0002087.1_g000016 |
| rosa_roxburghii | Rroxscaffold_1G00058040 |
| rosa_samantha | Rh5BG147300 Rh5CG158700 |
| rosa_wichuraiana | Rw5G013060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 104 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 215 |
| AciI | CCGC | 1 cut(s) | 83 |
| AcoI | YGGCCR | 2 cut(s) | 94, 693 |
| AcsI | RAATTY | 2 cut(s) | 192, 653 |
| AcyI | GRCGYC | 2 cut(s) | 101, 206 |
| AfaI | GTAC | 3 cut(s) | 17, 533, 663 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 215 |
| AgsI | TTSAA | 1 cut(s) | 599 |
| AhlI | ACTAGT | 1 cut(s) | 328 |
| AluBI | AGCT | 4 cut(s) | 55, 119, 479, 674 |
| AluI | AGCT | 4 cut(s) | 55, 119, 479, 674 |
| AoxI | GGCC | 3 cut(s) | 94, 383, 693 |
| ApeKI | GCWGC | 2 cut(s) | 119, 344 |
| ApoI | RAATTY | 2 cut(s) | 192, 653 |
| AspLEI | GCGC | 1 cut(s) | 76 |
| AspS9I | GGNCC | 3 cut(s) | 239, 428, 448 |
| AsuHPI | GGTGA | 1 cut(s) | 17 |
| AvaII | GGWCC | 3 cut(s) | 239, 428, 448 |
| BalI | TGGCCA | 1 cut(s) | 96 |
| BbvI | GCAGC | 2 cut(s) | 106, 331 |
| BccI | CCATC | 3 cut(s) | 166, 320, 460 |
| BceAI | ACGGC | 2 cut(s) | 96, 585 |
| BcuI | ACTAGT | 1 cut(s) | 328 |
| BfaI | CTAG | 1 cut(s) | 329 |
| BisI | GCNGC | 2 cut(s) | 120, 345 |
| BlsI | GCNGC | 2 cut(s) | 121, 346 |
| BmcAI | AGTACT | 2 cut(s) | 17, 663 |
| Bme18I | GGWCC | 3 cut(s) | 239, 428, 448 |
| BmgT120I | GGNCC | 3 cut(s) | 239, 428, 448 |
| BmiI | GGNNCC | 2 cut(s) | 240, 450 |
| BmsI | GCATC | 2 cut(s) | 188, 547 |
| BoxI | GACNNNNGTC | 1 cut(s) | 426 |
| BpuEI | CTTGAG | 1 cut(s) | 542 |
| BsaHI | GRCGYC | 2 cut(s) | 101, 206 |
| BsaJI | CCNNGG | 2 cut(s) | 486, 537 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 215 |
| Bse118I | RCCGGY | 1 cut(s) | 410 |
| Bse1I | ACTGG | 1 cut(s) | 13 |
| BseDI | CCNNGG | 2 cut(s) | 486, 537 |
| BseGI | GGATG | 1 cut(s) | 312 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 215 |
| BseNI | ACTGG | 1 cut(s) | 13 |
| BseXI | GCAGC | 2 cut(s) | 106, 331 |
| BshFI | GGCC | 3 cut(s) | 96, 385, 695 |
| BsiSI | CCGG | 1 cut(s) | 411 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 215 |
| BsnI | GGCC | 3 cut(s) | 96, 385, 695 |
| Bsp19I | CCATGG | 1 cut(s) | 486 |
| BspACI | CCGC | 1 cut(s) | 83 |
| BspANI | GGCC | 3 cut(s) | 96, 385, 695 |
| BspLI | GGNNCC | 2 cut(s) | 240, 450 |
| BsrFI | RCCGGY | 1 cut(s) | 410 |
| BsrI | ACTGG | 1 cut(s) | 13 |
| BssAI | RCCGGY | 1 cut(s) | 410 |
| BssECI | CCNNGG | 2 cut(s) | 486, 537 |
| BssNI | GRCGYC | 2 cut(s) | 101, 206 |
| BssT1I | CCWWGG | 1 cut(s) | 486 |
| Bst4CI | ACNGT | 2 cut(s) | 230, 369 |
| BstACI | GRCGYC | 2 cut(s) | 101, 206 |
| BstC8I | GCNNGC | 2 cut(s) | 72, 412 |
| BstDEI | CTNAG | 1 cut(s) | 166 |
| BstDSI | CCRYGG | 1 cut(s) | 486 |
| BstF5I | GGATG | 1 cut(s) | 312 |
| BstHHI | GCGC | 1 cut(s) | 76 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 80 |
| BstNSI | RCATGY | 1 cut(s) | 74 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 426 |
| BstV1I | GCAGC | 2 cut(s) | 106, 331 |
| BsuRI | GGCC | 3 cut(s) | 96, 385, 695 |
| BtgI | CCRYGG | 1 cut(s) | 486 |
| BtsCI | GGATG | 1 cut(s) | 312 |
| BtsI | GCAGTG | 1 cut(s) | 398 |
| BtsIMutI | CAGTG | 2 cut(s) | 235, 398 |
| Cac8I | GCNNGC | 2 cut(s) | 72, 412 |
| CfoI | GCGC | 1 cut(s) | 76 |
| Cfr10I | RCCGGY | 1 cut(s) | 410 |
| Cfr13I | GGNCC | 3 cut(s) | 239, 428, 448 |
| CseI | GACGC | 1 cut(s) | 214 |
| Csp6I | GTAC | 3 cut(s) | 16, 532, 662 |
| CviAII | CATG | 4 cut(s) | 71, 235, 487, 544 |
| CviJI | RGCY | 9 cut(s) | 12, 55, 96, 119, 385, 414, 479, 674, 695 |
| CviKI_1 | RGCY | 9 cut(s) | 12, 55, 96, 119, 385, 414, 479, 674, 695 |
| CviQI | GTAC | 3 cut(s) | 16, 532, 662 |
| DdeI | CTNAG | 1 cut(s) | 166 |
| EaeI | YGGCCR | 2 cut(s) | 94, 693 |
| Eco130I | CCWWGG | 1 cut(s) | 486 |
| Eco147I | AGGCCT | 1 cut(s) | 385 |
| Eco47I | GGWCC | 3 cut(s) | 239, 428, 448 |
| EcoT14I | CCWWGG | 1 cut(s) | 486 |
| ErhI | CCWWGG | 1 cut(s) | 486 |
| FaeI | CATG | 4 cut(s) | 74, 238, 490, 547 |
| FaiI | YATR | 8 cut(s) | 72, 137, 236, 303, 353, 488, 545, 635 |
| FatI | CATG | 4 cut(s) | 70, 234, 486, 543 |
| Fnu4HI | GCNGC | 2 cut(s) | 120, 345 |
| FokI | GGATG | 1 cut(s) | 299 |
| Fsp4HI | GCNGC | 2 cut(s) | 120, 345 |
| FspBI | CTAG | 1 cut(s) | 329 |
| GlaI | GCGC | 1 cut(s) | 75 |
| GluI | GCNGC | 2 cut(s) | 120, 345 |
| HaeIII | GGCC | 3 cut(s) | 96, 385, 695 |
| HapII | CCGG | 1 cut(s) | 411 |
| HgaI | GACGC | 1 cut(s) | 214 |
| HhaI | GCGC | 1 cut(s) | 76 |
| Hin1I | GRCGYC | 2 cut(s) | 101, 206 |
| Hin1II | CATG | 4 cut(s) | 74, 238, 490, 547 |
| Hin6I | GCGC | 1 cut(s) | 74 |
| HinP1I | GCGC | 1 cut(s) | 74 |
| HindIII | AAGCTT | 2 cut(s) | 53, 477 |
| HpaII | CCGG | 1 cut(s) | 411 |
| HphI | GGTGA | 1 cut(s) | 17 |
| Hpy166II | GTNNAC | 6 cut(s) | 226, 363, 431, 448, 534, 565 |
| Hpy188I | TCNGA | 6 cut(s) | 63, 189, 251, 264, 392, 659 |
| Hpy188III | TCNNGA | 1 cut(s) | 242 |
| Hpy8I | GTNNAC | 6 cut(s) | 226, 363, 431, 448, 534, 565 |
| Hpy99I | CGWCG | 1 cut(s) | 106 |
| HpyAV | CCTTC | 3 cut(s) | 54, 584, 593 |
| HpyCH4III | ACNGT | 2 cut(s) | 230, 369 |
| HpyCH4IV | ACGT | 1 cut(s) | 101 |
| HpyCH4V | TGCA | 2 cut(s) | 355, 509 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 80 |
| HpyF3I | CTNAG | 1 cut(s) | 166 |
| HpySE526I | ACGT | 1 cut(s) | 101 |
| Hsp92I | GRCGYC | 2 cut(s) | 101, 206 |
| Hsp92II | CATG | 4 cut(s) | 74, 238, 490, 547 |
| HspAI | GCGC | 1 cut(s) | 74 |
| KroI | GCCGGC | 1 cut(s) | 410 |
| KroNI | GCCGGC | 1 cut(s) | 412 |
| Lsp1109I | GCAGC | 2 cut(s) | 106, 331 |
| LweI | GCATC | 2 cut(s) | 188, 547 |
| MaeI | CTAG | 1 cut(s) | 329 |
| MaeII | ACGT | 1 cut(s) | 101 |
| MaeIII | GTNAC | 1 cut(s) | 319 |
| MboII | GAAGA | 2 cut(s) | 160, 695 |
| MlsI | TGGCCA | 1 cut(s) | 96 |
| MluCI | AATT | 3 cut(s) | 192, 636, 653 |
| MluNI | TGGCCA | 1 cut(s) | 96 |
| MnlI | CCTC | 2 cut(s) | 327, 532 |
| Mox20I | TGGCCA | 1 cut(s) | 96 |
| MroNI | GCCGGC | 1 cut(s) | 410 |
| MscI | TGGCCA | 1 cut(s) | 96 |
| MseI | TTAA | 1 cut(s) | 114 |
| Msp20I | TGGCCA | 1 cut(s) | 96 |
| MspA1I | CMGCKG | 1 cut(s) | 674 |
| MspI | CCGG | 1 cut(s) | 411 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 80 |
| NaeI | GCCGGC | 1 cut(s) | 412 |
| NcoI | CCATGG | 1 cut(s) | 486 |
| NgoMIV | GCCGGC | 1 cut(s) | 410 |
| NlaIII | CATG | 4 cut(s) | 74, 238, 490, 547 |
| NlaIV | GGNNCC | 2 cut(s) | 240, 450 |
| NmuCI | GTSAC | 1 cut(s) | 319 |
| NspI | RCATGY | 1 cut(s) | 74 |
| PaeI | GCATGC | 1 cut(s) | 74 |
| PceI | AGGCCT | 1 cut(s) | 385 |
| PdiI | GCCGGC | 1 cut(s) | 412 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 215 |
| PkrI | GCNGC | 2 cut(s) | 121, 346 |
| PshAI | GACNNNNGTC | 1 cut(s) | 426 |
| PspN4I | GGNNCC | 2 cut(s) | 240, 450 |
| PspPI | GGNCC | 3 cut(s) | 239, 428, 448 |
| PvuII | CAGCTG | 1 cut(s) | 674 |
| RsaI | GTAC | 3 cut(s) | 17, 533, 663 |
| RsaNI | GTAC | 3 cut(s) | 16, 532, 662 |
| SaqAI | TTAA | 1 cut(s) | 114 |
| SatI | GCNGC | 2 cut(s) | 120, 345 |
| Sau96I | GGNCC | 3 cut(s) | 239, 428, 448 |
| ScaI | AGTACT | 2 cut(s) | 17, 663 |
| SetI | ASST | 9 cut(s) | 57, 104, 121, 430, 447, 460, 481, 533, 676 |
| SfaNI | GCATC | 2 cut(s) | 188, 547 |
| SinI | GGWCC | 3 cut(s) | 239, 428, 448 |
| SmlI | CTYRAG | 1 cut(s) | 521 |
| SmoI | CTYRAG | 1 cut(s) | 521 |
| SpeI | ACTAGT | 1 cut(s) | 328 |
| SphI | GCATGC | 1 cut(s) | 74 |
| Sse9I | AATT | 3 cut(s) | 192, 636, 653 |
| SseBI | AGGCCT | 1 cut(s) | 385 |
| SsiI | CCGC | 1 cut(s) | 83 |
| SspI | AATATT | 1 cut(s) | 576 |
| SspMI | CTAG | 1 cut(s) | 329 |
| StuI | AGGCCT | 1 cut(s) | 385 |
| StyI | CCWWGG | 1 cut(s) | 486 |
| TaaI | ACNGT | 2 cut(s) | 230, 369 |
| TaiI | ACGT | 1 cut(s) | 104 |
| TasI | AATT | 3 cut(s) | 192, 636, 653 |
| TatI | WGTACW | 2 cut(s) | 15, 661 |
| Tru1I | TTAA | 1 cut(s) | 114 |
| Tru9I | TTAA | 1 cut(s) | 114 |
| TscAI | CASTG | 2 cut(s) | 235, 405 |
| TseFI | GTSAC | 1 cut(s) | 319 |
| TseI | GCWGC | 2 cut(s) | 119, 344 |
| Tsp45I | GTSAC | 1 cut(s) | 319 |
| TspDTI | ATGAA | 1 cut(s) | 189 |
| TspRI | CASTG | 2 cut(s) | 235, 405 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 215 |
| VpaK11BI | GGWCC | 3 cut(s) | 239, 428, 448 |
| XapI | RAATTY | 2 cut(s) | 192, 653 |
| XceI | RCATGY | 1 cut(s) | 74 |
| XspI | CTAG | 1 cut(s) | 329 |
| ZraI | GACGTC | 1 cut(s) | 102 |
| ZrmI | AGTACT | 2 cut(s) | 17, 663 |