The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G16470 AT1G16470 AT1G79210 AT1G79210 AT1G79210 |
| fragaria_vesca | FvH4_3g12361 FvH4_3g12361 |
| malus_domestica | MD05G1224600.v1.1 MD10G1206300.v1.1 |
| prunus_persica | Prupe.4G112500_v2.0.a1 Prupe.4G112500_v2.0.a1 Prupe.4G136000_v2.0.a1 Prupe.4G136000_v2.0.a1 Prupe.4G136000_v2.0.a1 Prupe.4G136000_v2.0.a1 Prupe.4G136000_v2.0.a1 |
| pyrus_communis | pycom05g20720 pycom10g17610 |
| rosa_chinensis | RchiOBHm_Chr5g0020171 |
| rosa_multiflora | Rmu_co8147062.1_g000001 Rmu_sc0000116.1_g000003 Rmu_sc0002087.1_g000016 |
| rosa_roxburghii | Rroxscaffold_1G00058040 |
| rosa_samantha | Rh5BG147300 Rh5CG158700 |
| rosa_wichuraiana | Rw5G013060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 215 |
| AclWI | GGATC | 2 cut(s) | 119, 443 |
| AcuI | CTGAAG | 2 cut(s) | 30, 438 |
| AfaI | GTAC | 3 cut(s) | 17, 285, 533 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 108, 215 |
| AgsI | TTSAA | 5 cut(s) | 162, 188, 586, 599, 683 |
| AjnI | CCWGG | 1 cut(s) | 441 |
| AluBI | AGCT | 4 cut(s) | 55, 119, 154, 550 |
| AluI | AGCT | 4 cut(s) | 55, 119, 154, 550 |
| Alw21I | GWGCWC | 3 cut(s) | 72, 552, 567 |
| Alw26I | GTCTC | 1 cut(s) | 505 |
| Alw44I | GTGCAC | 1 cut(s) | 563 |
| AlwI | GGATC | 2 cut(s) | 119, 443 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 202 |
| AoxI | GGCC | 1 cut(s) | 383 |
| ApaLI | GTGCAC | 1 cut(s) | 563 |
| ApeKI | GCWGC | 1 cut(s) | 344 |
| AspS9I | GGNCC | 2 cut(s) | 239, 428 |
| AsuHPI | GGTGA | 1 cut(s) | 22 |
| AvaII | GGWCC | 2 cut(s) | 239, 428 |
| BaeGI | GKGCMC | 1 cut(s) | 567 |
| BanII | GRGCYC | 1 cut(s) | 552 |
| BauI | CACGAG | 1 cut(s) | 469 |
| BbsI | GAAGAC | 1 cut(s) | 651 |
| Bbv12I | GWGCWC | 3 cut(s) | 72, 552, 567 |
| BbvI | GCAGC | 1 cut(s) | 331 |
| BceAI | ACGGC | 1 cut(s) | 585 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 72, 106 |
| BciT130I | CCWGG | 1 cut(s) | 443 |
| BcoDI | GTCTC | 1 cut(s) | 505 |
| BisI | GCNGC | 1 cut(s) | 345 |
| BlsI | GCNGC | 1 cut(s) | 346 |
| BmcAI | AGTACT | 1 cut(s) | 17 |
| Bme1390I | CCNGG | 1 cut(s) | 443 |
| Bme18I | GGWCC | 2 cut(s) | 239, 428 |
| BmgT120I | GGNCC | 2 cut(s) | 239, 428 |
| BmiI | GGNNCC | 3 cut(s) | 240, 309, 430 |
| BmrFI | CCNGG | 1 cut(s) | 443 |
| BmsI | GCATC | 3 cut(s) | 188, 342, 547 |
| BoxI | GACNNNNGTC | 1 cut(s) | 83 |
| BpiI | GAAGAC | 1 cut(s) | 651 |
| BpuEI | CTTGAG | 1 cut(s) | 542 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 108, 215 |
| Bse3DI | GCAATG | 1 cut(s) | 492 |
| BseBI | CCWGG | 1 cut(s) | 443 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 108, 215 |
| BseMI | GCAATG | 1 cut(s) | 492 |
| BseMII | CTCAG | 1 cut(s) | 624 |
| BseSI | GKGCMC | 1 cut(s) | 567 |
| BseXI | GCAGC | 1 cut(s) | 331 |
| BseYI | CCCAGC | 1 cut(s) | 670 |
| BsgI | GTGCAG | 1 cut(s) | 80 |
| BshFI | GGCC | 1 cut(s) | 385 |
| BsiHKAI | GWGCWC | 3 cut(s) | 72, 552, 567 |
| BslFI | GGGAC | 1 cut(s) | 414 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 108, 215 |
| BsmAI | GTCTC | 1 cut(s) | 505 |
| BsmFI | GGGAC | 1 cut(s) | 414 |
| BsmI | GAATGC | 1 cut(s) | 511 |
| BsnI | GGCC | 1 cut(s) | 385 |
| Bsp1286I | GDGCHC | 3 cut(s) | 72, 552, 567 |
| Bsp143I | GATC | 3 cut(s) | 63, 111, 448 |
| BspANI | GGCC | 1 cut(s) | 385 |
| BspCNI | CTCAG | 1 cut(s) | 623 |
| BspLI | GGNNCC | 3 cut(s) | 240, 309, 430 |
| BspPI | GGATC | 2 cut(s) | 119, 443 |
| BsrDI | GCAATG | 1 cut(s) | 492 |
| BssMI | GATC | 3 cut(s) | 63, 111, 448 |
| BssSI | CACGAG | 1 cut(s) | 469 |
| Bst2BI | CACGAG | 1 cut(s) | 469 |
| Bst2UI | CCWGG | 1 cut(s) | 443 |
| Bst4CI | ACNGT | 4 cut(s) | 11, 198, 230, 288 |
| Bst6I | CTCTTC | 2 cut(s) | 405, 521 |
| BstC8I | GCNNGC | 2 cut(s) | 72, 279 |
| BstDEI | CTNAG | 1 cut(s) | 610 |
| BstKTI | GATC | 3 cut(s) | 66, 114, 451 |
| BstMAI | GTCTC | 1 cut(s) | 505 |
| BstMBI | GATC | 3 cut(s) | 63, 111, 448 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 67, 80 |
| BstNI | CCWGG | 1 cut(s) | 443 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 83 |
| BstSCI | CCNGG | 1 cut(s) | 441 |
| BstSLI | GKGCMC | 1 cut(s) | 567 |
| BstV1I | GCAGC | 1 cut(s) | 331 |
| BstV2I | GAAGAC | 1 cut(s) | 651 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 374 |
| BsuRI | GGCC | 1 cut(s) | 385 |
| BtsIMutI | CAGTG | 3 cut(s) | 203, 235, 534 |
| Cac8I | GCNNGC | 2 cut(s) | 72, 279 |
| CaiI | CAGNNNCTG | 1 cut(s) | 202 |
| Cfr13I | GGNCC | 2 cut(s) | 239, 428 |
| Csp6I | GTAC | 3 cut(s) | 16, 284, 532 |
| CviJI | RGCY | 8 cut(s) | 55, 119, 154, 385, 479, 550, 572, 695 |
| CviKI_1 | RGCY | 8 cut(s) | 55, 119, 154, 385, 479, 550, 572, 695 |
| CviQI | GTAC | 3 cut(s) | 16, 284, 532 |
| DdeI | CTNAG | 1 cut(s) | 610 |
| DpnI | GATC | 3 cut(s) | 65, 113, 450 |
| DpnII | GATC | 3 cut(s) | 63, 111, 448 |
| Eam1104I | CTCTTC | 2 cut(s) | 405, 521 |
| EarI | CTCTTC | 2 cut(s) | 405, 521 |
| Ecl136II | GAGCTC | 1 cut(s) | 550 |
| Eco147I | AGGCCT | 1 cut(s) | 385 |
| Eco24I | GRGCYC | 1 cut(s) | 552 |
| Eco47I | GGWCC | 2 cut(s) | 239, 428 |
| Eco53kI | GAGCTC | 1 cut(s) | 550 |
| Eco57I | CTGAAG | 2 cut(s) | 30, 438 |
| EcoICRI | GAGCTC | 1 cut(s) | 550 |
| EcoO109I | RGGNCCY | 1 cut(s) | 239 |
| EcoRII | CCWGG | 1 cut(s) | 441 |
| EcoT38I | GRGCYC | 1 cut(s) | 552 |
| FaiI | YATR | 4 cut(s) | 236, 301, 303, 463 |
| FaqI | GGGAC | 1 cut(s) | 414 |
| Fnu4HI | GCNGC | 1 cut(s) | 345 |
| FriOI | GRGCYC | 1 cut(s) | 552 |
| Fsp4HI | GCNGC | 1 cut(s) | 345 |
| GluI | GCNGC | 1 cut(s) | 345 |
| GsaI | CCCAGC | 1 cut(s) | 674 |
| HaeIII | GGCC | 1 cut(s) | 385 |
| HindIII | AAGCTT | 2 cut(s) | 53, 117 |
| HinfI | GANTC | 1 cut(s) | 252 |
| HphI | GGTGA | 1 cut(s) | 22 |
| Hpy166II | GTNNAC | 4 cut(s) | 226, 363, 534, 565 |
| Hpy188I | TCNGA | 3 cut(s) | 99, 204, 264 |
| Hpy188III | TCNNGA | 4 cut(s) | 242, 502, 521, 612 |
| Hpy8I | GTNNAC | 4 cut(s) | 226, 363, 534, 565 |
| HpyAV | CCTTC | 5 cut(s) | 54, 168, 462, 580, 593 |
| HpyCH4III | ACNGT | 4 cut(s) | 11, 198, 230, 288 |
| HpyCH4V | TGCA | 5 cut(s) | 61, 355, 485, 509, 565 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 67, 80 |
| HpyF3I | CTNAG | 1 cut(s) | 610 |
| Kzo9I | GATC | 3 cut(s) | 63, 111, 448 |
| Lsp1109I | GCAGC | 1 cut(s) | 331 |
| LweI | GCATC | 3 cut(s) | 188, 342, 547 |
| MaeIII | GTNAC | 1 cut(s) | 319 |
| MalI | GATC | 3 cut(s) | 65, 113, 450 |
| MboI | GATC | 3 cut(s) | 63, 111, 448 |
| MboII | GAAGA | 6 cut(s) | 160, 392, 538, 566, 656, 695 |
| MhlI | GDGCHC | 3 cut(s) | 72, 552, 567 |
| MluCI | AATT | 2 cut(s) | 543, 636 |
| MlyI | GAGTC | 1 cut(s) | 261 |
| MnlI | CCTC | 5 cut(s) | 112, 327, 490, 522, 583 |
| MspR9I | CCNGG | 1 cut(s) | 443 |
| Mva1269I | GAATGC | 1 cut(s) | 511 |
| MvaI | CCWGG | 1 cut(s) | 443 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 67, 80 |
| NdeII | GATC | 3 cut(s) | 63, 111, 448 |
| NlaIV | GGNNCC | 3 cut(s) | 240, 309, 430 |
| PceI | AGGCCT | 1 cut(s) | 385 |
| PctI | GAATGC | 1 cut(s) | 511 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 215 |
| PkrI | GCNGC | 1 cut(s) | 346 |
| PleI | GAGTC | 1 cut(s) | 260 |
| PpsI | GAGTC | 1 cut(s) | 260 |
| PpuMI | RGGWCCY | 1 cut(s) | 239 |
| PshAI | GACNNNNGTC | 1 cut(s) | 83 |
| Psp124BI | GAGCTC | 1 cut(s) | 552 |
| Psp5II | RGGWCCY | 1 cut(s) | 239 |
| Psp6I | CCWGG | 1 cut(s) | 441 |
| PspFI | CCCAGC | 1 cut(s) | 670 |
| PspGI | CCWGG | 1 cut(s) | 441 |
| PspN4I | GGNNCC | 3 cut(s) | 240, 309, 430 |
| PspPI | GGNCC | 2 cut(s) | 239, 428 |
| PspPPI | RGGWCCY | 1 cut(s) | 239 |
| PstNI | CAGNNNCTG | 1 cut(s) | 202 |
| RsaI | GTAC | 3 cut(s) | 17, 285, 533 |
| RsaNI | GTAC | 3 cut(s) | 16, 284, 532 |
| SacI | GAGCTC | 1 cut(s) | 552 |
| SatI | GCNGC | 1 cut(s) | 345 |
| Sau3AI | GATC | 3 cut(s) | 63, 111, 448 |
| Sau96I | GGNCC | 2 cut(s) | 239, 428 |
| ScaI | AGTACT | 1 cut(s) | 17 |
| SchI | GAGTC | 1 cut(s) | 261 |
| ScrFI | CCNGG | 1 cut(s) | 443 |
| SduI | GDGCHC | 3 cut(s) | 72, 552, 567 |
| SetI | ASST | 9 cut(s) | 57, 104, 121, 156, 160, 447, 460, 533, 552 |
| SfaNI | GCATC | 3 cut(s) | 188, 342, 547 |
| SinI | GGWCC | 2 cut(s) | 239, 428 |
| SmlI | CTYRAG | 1 cut(s) | 521 |
| SmoI | CTYRAG | 1 cut(s) | 521 |
| Sse9I | AATT | 2 cut(s) | 543, 636 |
| SseBI | AGGCCT | 1 cut(s) | 385 |
| SspI | AATATT | 2 cut(s) | 214, 654 |
| SstI | GAGCTC | 1 cut(s) | 552 |
| StuI | AGGCCT | 1 cut(s) | 385 |
| StyD4I | CCNGG | 1 cut(s) | 441 |
| TaaI | ACNGT | 4 cut(s) | 11, 198, 230, 288 |
| TaqI | TCGA | 6 cut(s) | 66, 250, 417, 503, 552, 702 |
| TasI | AATT | 2 cut(s) | 543, 636 |
| TatI | WGTACW | 2 cut(s) | 15, 283 |
| TscAI | CASTG | 3 cut(s) | 203, 235, 541 |
| TseI | GCWGC | 1 cut(s) | 344 |
| TspDTI | ATGAA | 2 cut(s) | 189, 450 |
| TspRI | CASTG | 3 cut(s) | 203, 235, 541 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 215 |
| VneI | GTGCAC | 1 cut(s) | 563 |
| VpaK11BI | GGWCC | 2 cut(s) | 239, 428 |
| ZrmI | AGTACT | 1 cut(s) | 17 |