Prupe.4G124700_v2.0.a1

UPF0678 fatty acid-binding protein-like protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
6803579 .. 6806410
2832 bp
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UTR
Exon/CDS
Intron
Prupe.4G124700.1

Sequence Viewer

Length: 483 bp
ATGGAGGATACTACAGAATCACCGGCTATACACCCAGCAATAGCACCACTCTCATACCTGCTGGGAACATGGAGAGGCCAAGGGGAAGGTGGGTTTCCCACCATCAACTCCTTCTCGTACGTTGAACAACTCCATTTCTCTCACTCTGGCAAGCCCTTCATAGCTTACACTCAGAAGACCTGGAAATTGAACTCTGGGGAGCCTATGCACGCTGAGAGTGGCTTTTGGAGACCCAAACCAGATGGTACTATTGAAGTTGTCATTTCCCAAAGCACTGGCCTTGTTGAAGTTCAGAAAGGGACATACAGTGCAGAAGAGAAAGTAATAAAGCTTCAAAGTGAGCTTGTCGGCAATGCTTCTAAGGTGAGAGAGATAACCAGAGTTTTTAAGTTGGTAGATGAAGAACTGTTTTATGAGGTTAAGATGGCTACAAATCTCACAAGTCTTCAACCACATCTGAAAGCTTCGCTCCAAAGAATCTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

161

Amino Acids

17.87

Weight (kDa)

6.21

Isoelectric Point (pI)

40.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0013155)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 66
AfaI GTAC 2 cut(s) 119, 247
AgsI TTSAA 6 cut(s) 125, 190, 254, 287, 335, 449
AjnI CCWGG 1 cut(s) 179
AluBI AGCT 4 cut(s) 164, 331, 343, 464
AluI AGCT 4 cut(s) 164, 331, 343, 464
Alw26I GTCTC 1 cut(s) 223
AoxI GGCC 2 cut(s) 76, 277
AsuHPI GGTGA 2 cut(s) 12, 376
BarI GAAGNNNNNNTAC 2 cut(s) 315, 347
BbsI GAAGAC 2 cut(s) 182, 437
BccI CCATC 3 cut(s) 110, 236, 418
BciT130I CCWGG 1 cut(s) 181
BcoDI GTCTC 1 cut(s) 223
BfmI CTRYAG 1 cut(s) 12
BfuAI ACCTGC 1 cut(s) 66
Bme1390I CCNGG 1 cut(s) 181
BmiI GGNNCC 1 cut(s) 201
BmrFI CCNGG 1 cut(s) 181
BpiI GAAGAC 2 cut(s) 182, 437
BsaI GGTCTC 1 cut(s) 223
BsaJI CCNNGG 1 cut(s) 79
Bse118I RCCGGY 1 cut(s) 22
Bse1I ACTGG 1 cut(s) 280
Bse3DI GCAATG 1 cut(s) 358
BseBI CCWGG 1 cut(s) 181
BseDI CCNNGG 1 cut(s) 79
BseMI GCAATG 1 cut(s) 358
BseMII CTCAG 2 cut(s) 185, 204
BseNI ACTGG 1 cut(s) 280
BseYI CCCAGC 2 cut(s) 34, 61
BsgI GTGCAG 1 cut(s) 330
BshFI GGCC 2 cut(s) 78, 279
BsiSI CCGG 1 cut(s) 23
BsiWI CGTACG 1 cut(s) 117
BslFI GGGAC 1 cut(s) 313
BsmAI GTCTC 1 cut(s) 223
BsmFI GGGAC 1 cut(s) 313
BsnI GGCC 2 cut(s) 78, 279
Bso31I GGTCTC 1 cut(s) 223
BspANI GGCC 2 cut(s) 78, 279
BspCNI CTCAG 2 cut(s) 184, 205
BspLI GGNNCC 1 cut(s) 201
BspMI ACCTGC 1 cut(s) 66
BspTNI GGTCTC 1 cut(s) 223
BsrDI GCAATG 1 cut(s) 358
BsrFI RCCGGY 1 cut(s) 22
BsrI ACTGG 1 cut(s) 280
BssAI RCCGGY 1 cut(s) 22
BssECI CCNNGG 1 cut(s) 79
BssT1I CCWWGG 1 cut(s) 79
Bst2UI CCWGG 1 cut(s) 181
Bst4CI ACNGT 2 cut(s) 308, 408
Bst6I CTCTTC 1 cut(s) 309
BstC8I GCNNGC 2 cut(s) 152, 210
BstDEI CTNAG 3 cut(s) 171, 213, 360
BstMAI GTCTC 1 cut(s) 223
BstNI CCWGG 1 cut(s) 181
BstSCI CCNGG 1 cut(s) 179
BstSFI CTRYAG 1 cut(s) 12
BstV2I GAAGAC 2 cut(s) 182, 437
BstXI CCANNNNNNTGG 1 cut(s) 275
BsuRI GGCC 2 cut(s) 78, 279
BtsIMutI CAGTG 2 cut(s) 273, 313
BveI ACCTGC 1 cut(s) 66
Cac8I GCNNGC 2 cut(s) 152, 210
Cfr10I RCCGGY 1 cut(s) 22
Csp6I GTAC 2 cut(s) 118, 246
CviAII CATG 1 cut(s) 69
CviQI GTAC 2 cut(s) 118, 246
DdeI CTNAG 3 cut(s) 171, 213, 360
Eam1104I CTCTTC 1 cut(s) 309
EarI CTCTTC 1 cut(s) 309
Eco130I CCWWGG 1 cut(s) 79
Eco31I GGTCTC 1 cut(s) 223
EcoRII CCWGG 1 cut(s) 179
EcoT14I CCWWGG 1 cut(s) 79
ErhI CCWWGG 1 cut(s) 79
FaeI CATG 1 cut(s) 72
FaiI YATR 7 cut(s) 29, 55, 70, 161, 206, 304, 414
FaqI GGGAC 1 cut(s) 313
FatI CATG 1 cut(s) 68
GsaI CCCAGC 2 cut(s) 38, 65
HaeIII GGCC 2 cut(s) 78, 279
HapII CCGG 1 cut(s) 23
Hin1II CATG 1 cut(s) 72
HindIII AAGCTT 2 cut(s) 329, 462
HinfI GANTC 2 cut(s) 17, 477
HpaII CCGG 1 cut(s) 23
HphI GGTGA 2 cut(s) 12, 376
Hpy188I TCNGA 4 cut(s) 174, 294, 459, 482
HpyAV CCTTC 3 cut(s) 80, 121, 166
HpyCH4III ACNGT 2 cut(s) 308, 408
HpyCH4IV ACGT 1 cut(s) 120
HpyCH4V TGCA 2 cut(s) 208, 311
HpyF3I CTNAG 3 cut(s) 171, 213, 360
HpySE526I ACGT 1 cut(s) 120
Hsp92II CATG 1 cut(s) 72
LmnI GCTCC 2 cut(s) 199, 474
MaeII ACGT 1 cut(s) 120
MboII GAAGA 4 cut(s) 187, 326, 413, 437
MluCI AATT 1 cut(s) 185
MnlI CCTC 2 cut(s) 68, 409
MseI TTAA 2 cut(s) 387, 420
MspI CCGG 1 cut(s) 23
MspR9I CCNGG 1 cut(s) 181
MvaI CCWGG 1 cut(s) 181
NlaIII CATG 1 cut(s) 72
NlaIV GGNNCC 1 cut(s) 201
PfeI GAWTC 2 cut(s) 17, 477
Pfl23II CGTACG 1 cut(s) 117
Psp6I CCWGG 1 cut(s) 179
PspFI CCCAGC 2 cut(s) 34, 61
PspGI CCWGG 1 cut(s) 179
PspLI CGTACG 1 cut(s) 117
PspN4I GGNNCC 1 cut(s) 201
RsaI GTAC 2 cut(s) 119, 247
RsaNI GTAC 2 cut(s) 118, 246
SaqAI TTAA 2 cut(s) 387, 420
ScrFI CCNGG 1 cut(s) 181
SfcI CTRYAG 1 cut(s) 12
Sse9I AATT 1 cut(s) 185
StyD4I CCNGG 1 cut(s) 179
StyI CCWWGG 1 cut(s) 79
TaaI ACNGT 2 cut(s) 308, 408
TaiI ACGT 1 cut(s) 123
TasI AATT 1 cut(s) 185
TfiI GAWTC 2 cut(s) 17, 477
Tru1I TTAA 2 cut(s) 387, 420
Tru9I TTAA 2 cut(s) 387, 420
TscAI CASTG 2 cut(s) 280, 313
TspDTI ATGAA 2 cut(s) 148, 414
TspRI CASTG 2 cut(s) 280, 313
XcmI CCANNNNNNNNNTGG 1 cut(s) 86
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.