Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0017752

Physical Location & Seq

Genomic Coordinates Reverse (-)

8348355 .. 8350383

Gene Structure 2029 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G145200.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 540 bp

ATGTTTGAGCTTGAAGACAACAAGGCCAAGCTCTGGTGTGACTGTCCCTTTTGGACCGAAGATGGTATGTGCCTGTTGCGTGACTGCAGCATCTGTGAATGCCCAGAAAATGAATTTCCAGAACCTTTTAAGAGGCCCTTGCTCCAGGGCCTTCCACCTGACAGTTTTGTGTGTCAAGAGGGAAAGCAGCAGGGGACTTTTGACTGGACGCTAGACAGTAGAGCTTTCAGAGGCTGGGTTGAGACAGATAATCCTTGGACAAATGATGAGGAGACGGATAATGGTGAGATGACATATGTGAACCTTCTATTGAACCCTGAACGTTACACTGGCAATGCTGGTCCATCACCAAGAAGGATATGGGATGCTGTGTATTCTGAAAATTGCCCGAAATATTCATCTCAGGACATTTGCCAGGAGAAAAAAGTATTATACAAATTAATATCTGGTCTTCACTCCTCAATTTCGATCCACATAGCTGCTGATTATCTTCTTGATAAGACTACTAATCTGGTTCTCCTTCTGCCTCATATCATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003756 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006457 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0012505 GO:0015035 GO:0015036 GO:0016020 GO:0016491 GO:0016667 GO:0016853 GO:0016860 GO:0016864 GO:0019538 GO:0031984 GO:0034975 GO:0036211 GO:0042175 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0055114 GO:0071704 GO:0098827 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04141 ko05110 map04141 map05110

Pfam Domains

Protein Families

ERO1

Protein Analysis

180

Amino Acids

20.65

Weight (kDa)

4.55

Isoelectric Point (pI)

53.94

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0017752)

Species	Orthologous Gene IDs
prunus_persica	Prupe.4G145200_v2.0.a1 Prupe.4G145200_v2.0.a1
rosa_multiflora	Rmu_sc0000689.1_g000027 Rmu_sc0000882.1_g000037 Rmu_sc0002522.1_g000031 Rmu_sc0006065.1_g000014 Rmu_sc0014478.1_g000016
rosa_rugosa	Rorug02G0232200 Rorug06G0256800
rosa_samantha	Rh2CG037300 Rh5AG086600 Rh5AG304000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	33
AclI	AACGTT	1 cut(s)	322
AclWI	GGATC	1 cut(s)	463
AcsI	RAATTY	1 cut(s)	113
AfiI	CCNNNNNNNGG	1 cut(s)	33
AgsI	TTSAA	2 cut(s)	14, 313
AjnI	CCWGG	2 cut(s)	144, 414
AluBI	AGCT	4 cut(s)	10, 31, 224, 479
AluI	AGCT	4 cut(s)	10, 31, 224, 479
Alw26I	GTCTC	2 cut(s)	236, 266
AlwI	GGATC	1 cut(s)	463
AlwNI	CAGNNNCTG	2 cut(s)	93, 234
AoxI	GGCC	3 cut(s)	24, 134, 148
ApeKI	GCWGC	3 cut(s)	87, 187, 479
ApoI	RAATTY	1 cut(s)	113
AseI	ATTAAT	1 cut(s)	440
AspS9I	GGNCC	4 cut(s)	54, 135, 148, 341
AsuHPI	GGTGA	2 cut(s)	296, 339
AvaII	GGWCC	2 cut(s)	54, 341
BbsI	GAAGAC	2 cut(s)	21, 443
BbvI	GCAGC	3 cut(s)	99, 199, 466
BccI	CCATC	2 cut(s)	56, 352
BciT130I	CCWGG	2 cut(s)	146, 416
BcoDI	GTCTC	2 cut(s)	236, 266
BfaI	CTAG	1 cut(s)	212
BfmI	CTRYAG	1 cut(s)	85
BisI	GCNGC	3 cut(s)	88, 188, 480
BlsI	GCNGC	3 cut(s)	89, 189, 481
Bme1390I	CCNGG	2 cut(s)	146, 416
Bme18I	GGWCC	2 cut(s)	54, 341
BmgT120I	GGNCC	4 cut(s)	54, 135, 148, 341
BmrFI	CCNGG	2 cut(s)	146, 416
BmsI	GCATC	2 cut(s)	99, 355
BpiI	GAAGAC	2 cut(s)	21, 443
BpmI	CTGGAG	1 cut(s)	128
BsaJI	CCNNGG	2 cut(s)	145, 254
Bsc4I	CCNNNNNNNGG	1 cut(s)	33
Bse1I	ACTGG	2 cut(s)	209, 334
Bse3DI	GCAATG	1 cut(s)	340
BseBI	CCWGG	2 cut(s)	146, 416
BseDI	CCNNGG	2 cut(s)	145, 254
BseGI	GGATG	1 cut(s)	370
BseLI	CCNNNNNNNGG	1 cut(s)	33
BseMI	GCAATG	1 cut(s)	340
BseMII	CTCAG	1 cut(s)	416
BseNI	ACTGG	2 cut(s)	209, 334
BseRI	GAGGAG	2 cut(s)	284, 448
BseXI	GCAGC	3 cut(s)	99, 199, 466
BseYI	CCCAGC	1 cut(s)	234
BshFI	GGCC	3 cut(s)	26, 136, 150
BslFI	GGGAC	2 cut(s)	30, 208
BslI	CCNNNNNNNGG	1 cut(s)	33
BsmAI	GTCTC	2 cut(s)	236, 266
BsmBI	CGTCTC	1 cut(s)	266
BsmFI	GGGAC	2 cut(s)	30, 208
BsmI	GAATGC	1 cut(s)	104
BsnI	GGCC	3 cut(s)	26, 136, 150
Bsp143I	GATC	1 cut(s)	468
BspANI	GGCC	3 cut(s)	26, 136, 150
BspCNI	CTCAG	1 cut(s)	415
BspMAI	CTGCAG	1 cut(s)	89
BspPI	GGATC	1 cut(s)	463
BsrDI	GCAATG	1 cut(s)	340
BsrI	ACTGG	2 cut(s)	209, 334
BssECI	CCNNGG	2 cut(s)	145, 254
BssMI	GATC	1 cut(s)	468
BssT1I	CCWWGG	1 cut(s)	254
Bst2UI	CCWGG	2 cut(s)	146, 416
Bst4CI	ACNGT	3 cut(s)	44, 164, 218
BstDEI	CTNAG	1 cut(s)	402
BstF5I	GGATG	1 cut(s)	370
BstKTI	GATC	1 cut(s)	471
BstMAI	GTCTC	2 cut(s)	236, 266
BstMBI	GATC	1 cut(s)	468
BstNI	CCWGG	2 cut(s)	146, 416
BstSCI	CCNGG	2 cut(s)	144, 414
BstSFI	CTRYAG	1 cut(s)	85
BstV1I	GCAGC	3 cut(s)	99, 199, 466
BstV2I	GAAGAC	2 cut(s)	21, 443
BsuRI	GGCC	3 cut(s)	26, 136, 150
BtsCI	GGATG	1 cut(s)	370
BtsIMutI	CAGTG	1 cut(s)	327
CaiI	CAGNNNCTG	2 cut(s)	93, 234
Cfr13I	GGNCC	4 cut(s)	54, 135, 148, 341
CseI	GACGC	1 cut(s)	217
CviAII	CATG	1 cut(s)	535
CviJI	RGCY	8 cut(s)	10, 26, 31, 136, 150, 224, 234, 479
CviKI_1	RGCY	8 cut(s)	10, 26, 31, 136, 150, 224, 234, 479
DdeI	CTNAG	1 cut(s)	402
DpnI	GATC	1 cut(s)	470
DpnII	GATC	1 cut(s)	468
Eco130I	CCWWGG	1 cut(s)	254
Eco47I	GGWCC	2 cut(s)	54, 341
EcoO109I	RGGNCCY	2 cut(s)	135, 148
EcoRII	CCWGG	2 cut(s)	144, 414
EcoT14I	CCWWGG	1 cut(s)	254
ErhI	CCWWGG	1 cut(s)	254
Esp3I	CGTCTC	1 cut(s)	266
FaeI	CATG	1 cut(s)	538
FaiI	YATR	8 cut(s)	68, 295, 297, 361, 433, 476, 531, 536
FalI	AAGNNNNNCTT	2 cut(s)	122, 154
FaqI	GGGAC	2 cut(s)	30, 208
FatI	CATG	1 cut(s)	534
FauNDI	CATATG	1 cut(s)	295
Fnu4HI	GCNGC	3 cut(s)	88, 188, 480
FokI	GGATG	1 cut(s)	377
Fsp4HI	GCNGC	3 cut(s)	88, 188, 480
FspBI	CTAG	1 cut(s)	212
GluI	GCNGC	3 cut(s)	88, 188, 480
GsaI	CCCAGC	1 cut(s)	238
GsuI	CTGGAG	1 cut(s)	128
HaeIII	GGCC	3 cut(s)	26, 136, 150
HgaI	GACGC	1 cut(s)	217
Hin1II	CATG	1 cut(s)	538
HphI	GGTGA	2 cut(s)	296, 339
Hpy166II	GTNNAC	1 cut(s)	301
Hpy188I	TCNGA	2 cut(s)	230, 379
Hpy188III	TCNNGA	4 cut(s)	119, 176, 404, 494
Hpy8I	GTNNAC	1 cut(s)	301
HpyAV	CCTTC	4 cut(s)	161, 314, 348, 530
HpyCH4III	ACNGT	3 cut(s)	44, 164, 218
HpyCH4IV	ACGT	1 cut(s)	322
HpyCH4V	TGCA	1 cut(s)	87
HpyF3I	CTNAG	1 cut(s)	402
HpySE526I	ACGT	1 cut(s)	322
Hsp92II	CATG	1 cut(s)	538
Kzo9I	GATC	1 cut(s)	468
LmnI	GCTCC	1 cut(s)	147
Lsp1109I	GCAGC	3 cut(s)	99, 199, 466
LweI	GCATC	2 cut(s)	99, 355
MaeI	CTAG	1 cut(s)	212
MaeII	ACGT	1 cut(s)	322
MaeIII	GTNAC	3 cut(s)	38, 80, 323
MalI	GATC	1 cut(s)	470
MboI	GATC	1 cut(s)	468
MboII	GAAGA	4 cut(s)	26, 71, 443, 482
MluCI	AATT	4 cut(s)	113, 382, 437, 462
MnlI	CCTC	6 cut(s)	126, 172, 224, 262, 469, 537
MseI	TTAA	2 cut(s)	129, 440
MspR9I	CCNGG	2 cut(s)	146, 416
Mva1269I	GAATGC	1 cut(s)	104
MvaI	CCWGG	2 cut(s)	146, 416
NdeI	CATATG	1 cut(s)	295
NdeII	GATC	1 cut(s)	468
NlaIII	CATG	1 cut(s)	538
NmuCI	GTSAC	2 cut(s)	38, 80
PctI	GAATGC	1 cut(s)	104
PflMI	CCANNNNNTGG	1 cut(s)	33
PkrI	GCNGC	3 cut(s)	89, 189, 481
PshBI	ATTAAT	1 cut(s)	440
Psp1406I	AACGTT	1 cut(s)	322
Psp6I	CCWGG	2 cut(s)	144, 414
PspFI	CCCAGC	1 cut(s)	234
PspGI	CCWGG	2 cut(s)	144, 414
PspPI	GGNCC	4 cut(s)	54, 135, 148, 341
PstI	CTGCAG	1 cut(s)	89
PstNI	CAGNNNCTG	2 cut(s)	93, 234
SaqAI	TTAA	2 cut(s)	129, 440
SatI	GCNGC	3 cut(s)	88, 188, 480
Sau3AI	GATC	1 cut(s)	468
Sau96I	GGNCC	4 cut(s)	54, 135, 148, 341
ScrFI	CCNGG	2 cut(s)	146, 416
SetI	ASST	8 cut(s)	12, 33, 127, 160, 226, 306, 325, 481
SfaNI	GCATC	2 cut(s)	99, 355
SfcI	CTRYAG	1 cut(s)	85
SinI	GGWCC	2 cut(s)	54, 341
Sse9I	AATT	4 cut(s)	113, 382, 437, 462
SspI	AATATT	1 cut(s)	395
SspMI	CTAG	1 cut(s)	212
StyD4I	CCNGG	2 cut(s)	144, 414
StyI	CCWWGG	1 cut(s)	254
TaaI	ACNGT	3 cut(s)	44, 164, 218
TaiI	ACGT	1 cut(s)	325
TaqI	TCGA	1 cut(s)	467
TaqII	GACCGA	1 cut(s)	71
TasI	AATT	4 cut(s)	113, 382, 437, 462
Tru1I	TTAA	2 cut(s)	129, 440
Tru9I	TTAA	2 cut(s)	129, 440
TscAI	CASTG	1 cut(s)	334
TseFI	GTSAC	2 cut(s)	38, 80
TseI	GCWGC	3 cut(s)	87, 187, 479
Tsp45I	GTSAC	2 cut(s)	38, 80
TspDTI	ATGAA	2 cut(s)	126, 387
TspGWI	ACGGA	1 cut(s)	290
TspRI	CASTG	1 cut(s)	334
Van91I	CCANNNNNTGG	1 cut(s)	33
VpaK11BI	GGWCC	2 cut(s)	54, 341
VspI	ATTAAT	1 cut(s)	440
XapI	RAATTY	1 cut(s)	113
XcmI	CCANNNNNNNNNTGG	1 cut(s)	357
XspI	CTAG	1 cut(s)	212

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.