Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0007305

Physical Location & Seq

Genomic Coordinates Reverse (-)

8469963 .. 8472932

Gene Structure 2970 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G148300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1059 bp

ATGCAAACCGCTTCGTATCTTCATCCGTTCTCTTATTACTCTGACAGAAGAAGCCTTTTAAAACCAGATGGGTGCGTTAAATTACAAATCCCATATTCAAGTCAGCTTGGTAGGAAAGTTCCGCTCACTGGAAGACCTCAGACATGTCAGTTTCTCATGCCTAAGCAACAAACCATATTGTTTGCAGTTCCCAACACAGATGATGGCCACCCTTCTGTCTCTGTGTTAGAAGATTCAAATACAAATCATGCACCCAATTCTGAGCCAGAGACGGTGTTGCGCAAATGGTCACCTCCCAGGTATATGTGGAGGGGATTCTCAGCTCTTATCCTTGCTGGGCAGGTAATTGTTAGAACTTTAAGGGGCAAAGTGCACTGGAGAAATACTCTCCAACAATTAAAGAGAGTTGGGCCAAATTCAGTCGGGGTCTGTCTCTTAACTTCAGCATTTGTTGGCATGGCCTTTACCATCCAATTTGTTAGAGAATTTACTAGATTAGGGTTAAGCAGAGCTGTTGGTGGGGTTTTAGCCCTGGCTTTCTCAAGGGAGTTGAGTCCTGTAATTACATCAATTGTGGTTGCTGGGCGTATTGGAAGTGCATTTGCAGCAGAGCTGGGAACAATGCAGGTTTCTGAACAAACTGACACACTGAGAGTTCTTGGGGCAGATCCTGTTGATTATCTTGTGACTCCAAGGGTGATTGCTACCTGCATTGCTCTGCCGTTTCTGACTCTAATGTGTTTTACAGTAGGGATGGCATCCAGCGCCCTCCTTGCTGATGGAATTTATGGTGTTAGCATTAACATTATTTTGGAGTCAGCTCGGAGAGCTCTTACCTCTTGGGATATAATTAGTGCAATGATCAAGTCACAGGCTTTTGGTGCAATTATATCTATAGTGAGTTGTGCTTGGGGAGTTACCACTATGGGAGGAGCCAAGGGTGTTGGGGAATCAACAACTTCGGCTGTGGTTATCTCTCTTGTTGGGATCTTTATAGCTGATTTTGTACTCTCTTATTGTTTCTTCCAGGGAGTTGGAGATTCATTGAAGAATCTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005319 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006810 GO:0006869 GO:0008150 GO:0009507 GO:0009526 GO:0009527 GO:0009528 GO:0009536 GO:0009706 GO:0009707 GO:0009941 GO:0010876 GO:0016020 GO:0019866 GO:0019867 GO:0031090 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0033036 GO:0042170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0071702 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MlaE PUNUT

Protein Analysis

353

Amino Acids

38.01

Weight (kDa)

9.33

Isoelectric Point (pI)

32.81

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007305)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19800 AT1G19800 AT1G19800 AT1G19800 AT1G19800 AT1G19800
fragaria_vesca	FvH4_3g16560
malus_domestica	MD05G1209200.v1.1 MD10G1195600.v1.1
prunus_persica	Prupe.4G148300_v2.0.a1 Prupe.4G148300_v2.0.a1
pyrus_communis	pycom05g19530
rosa_chinensis	RchiOBHm_Chr5g0027591
rosa_laevigata	RLG00000033031
rosa_multiflora	Rmu_sc0001647.1_g000008 Rmu_sc0011056.1_g000002
rosa_roxburghii	Rroxscaffold_1G00051940
rosa_rugosa	Rorug05G0099900 Rorug05G0099900 Rorug05G0100000
rosa_samantha	Rh5AG194300 Rh5BG192400 Rh5CG212400 Rh5DG194100
rosa_wichuraiana	Rw5G017710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	281
Acc36I	ACCTGC	3 cut(s)	331, 616, 716
AccBSI	CCGCTC	1 cut(s)	124
AciI	CCGC	2 cut(s)	9, 122
AclWI	GGATC	2 cut(s)	662, 995
AcoI	YGGCCR	1 cut(s)	205
AcsI	RAATTY	3 cut(s)	415, 485, 783
AcuI	CTGAAG	1 cut(s)	426
AfaI	GTAC	1 cut(s)	1008
AfiI	CCNNNNNNNGG	1 cut(s)	128
AflIII	ACRYGT	1 cut(s)	143
AgsI	TTSAA	3 cut(s)	99, 237, 1048
AjnI	CCWGG	3 cut(s)	296, 531, 1026
AluBI	AGCT	7 cut(s)	106, 323, 512, 613, 821, 830, 998
AluI	AGCT	7 cut(s)	106, 323, 512, 613, 821, 830, 998
Alw21I	GWGCWC	2 cut(s)	375, 832
Alw26I	GTCTC	3 cut(s)	223, 263, 437
Alw44I	GTGCAC	1 cut(s)	371
AlwI	GGATC	2 cut(s)	662, 995
AlwNI	CAGNNNCTG	1 cut(s)	671
AoxI	GGCC	3 cut(s)	205, 410, 459
ApaLI	GTGCAC	1 cut(s)	371
ApeKI	GCWGC	1 cut(s)	605
ApoI	RAATTY	3 cut(s)	415, 485, 783
AspLEI	GCGC	2 cut(s)	282, 767
AspS9I	GGNCC	1 cut(s)	410
AsuHPI	GGTGA	2 cut(s)	282, 709
BaeGI	GKGCMC	1 cut(s)	375
BalI	TGGCCA	1 cut(s)	207
BanII	GRGCYC	1 cut(s)	832
BbsI	GAAGAC	1 cut(s)	139
Bbv12I	GWGCWC	2 cut(s)	375, 832
BbvI	GCAGC	1 cut(s)	617
BccI	CCATC	5 cut(s)	62, 197, 476, 748, 773
BceAI	ACGGC	1 cut(s)	706
BciT130I	CCWGG	3 cut(s)	298, 533, 1028
BclI	TGATCA	1 cut(s)	861
BcoDI	GTCTC	3 cut(s)	223, 263, 437
BfaI	CTAG	1 cut(s)	492
BfmI	CTRYAG	1 cut(s)	894
BfoI	RGCGCY	1 cut(s)	768
BfuAI	ACCTGC	3 cut(s)	331, 616, 716
BisI	GCNGC	1 cut(s)	606
BlsI	GCNGC	1 cut(s)	607
Bme1390I	CCNGG	3 cut(s)	298, 533, 1028
BmgT120I	GGNCC	1 cut(s)	410
BmiI	GGNNCC	1 cut(s)	934
BmrFI	CCNGG	3 cut(s)	298, 533, 1028
BmsI	GCATC	1 cut(s)	767
BpiI	GAAGAC	1 cut(s)	139
BplI	GAGNNNNNCTC	2 cut(s)	370, 402
BpmI	CTGGAG	1 cut(s)	397
Bpu10I	CCTNAGC	1 cut(s)	162
BpuEI	CTTGAG	1 cut(s)	526
BsaJI	CCNNGG	5 cut(s)	296, 531, 692, 936, 1027
Bsc4I	CCNNNNNNNGG	1 cut(s)	128
Bse1I	ACTGG	2 cut(s)	133, 380
Bse3DI	GCAATG	2 cut(s)	711, 864
BseBI	CCWGG	3 cut(s)	298, 533, 1028
BseDI	CCNNGG	5 cut(s)	296, 531, 692, 936, 1027
BseGI	GGATG	4 cut(s)	22, 468, 758, 759
BseLI	CCNNNNNNNGG	1 cut(s)	128
BseMI	GCAATG	2 cut(s)	711, 864
BseMII	CTCAG	4 cut(s)	152, 252, 333, 641
BseNI	ACTGG	2 cut(s)	133, 380
BseRI	GAGGAG	1 cut(s)	945
BseSI	GKGCMC	1 cut(s)	375
BseXI	GCAGC	1 cut(s)	617
BseYI	CCCAGC	3 cut(s)	335, 581, 613
BshFI	GGCC	3 cut(s)	207, 412, 461
BsiHKAI	GWGCWC	2 cut(s)	375, 832
BslI	CCNNNNNNNGG	1 cut(s)	128
BsmAI	GTCTC	3 cut(s)	223, 263, 437
BsmBI	CGTCTC	1 cut(s)	263
BsnI	GGCC	3 cut(s)	207, 412, 461
Bsp1286I	GDGCHC	2 cut(s)	375, 832
Bsp143I	GATC	3 cut(s)	667, 861, 987
BspACI	CCGC	2 cut(s)	9, 122
BspANI	GGCC	3 cut(s)	207, 412, 461
BspCNI	CTCAG	4 cut(s)	151, 253, 332, 642
BspLI	GGNNCC	1 cut(s)	934
BspMI	ACCTGC	3 cut(s)	331, 616, 716
BspPI	GGATC	2 cut(s)	662, 995
BsrBI	CCGCTC	1 cut(s)	124
BsrDI	GCAATG	2 cut(s)	711, 864
BsrI	ACTGG	2 cut(s)	133, 380
BssECI	CCNNGG	5 cut(s)	296, 531, 692, 936, 1027
BssMI	GATC	3 cut(s)	667, 861, 987
BssT1I	CCWWGG	2 cut(s)	692, 936
Bst2UI	CCWGG	3 cut(s)	298, 533, 1028
Bst4CI	ACNGT	2 cut(s)	274, 748
BstDEI	CTNAG	5 cut(s)	138, 162, 261, 319, 650
BstEII	GGTNACC	1 cut(s)	288
BstF5I	GGATG	4 cut(s)	22, 468, 758, 759
BstH2I	RGCGCY	1 cut(s)	768
BstHHI	GCGC	2 cut(s)	282, 767
BstKTI	GATC	3 cut(s)	670, 864, 990
BstMAI	GTCTC	3 cut(s)	223, 263, 437
BstMBI	GATC	3 cut(s)	667, 861, 987
BstMWI	GCNNNNNNNGC	5 cut(s)	605, 764, 773, 827, 881
BstNI	CCWGG	3 cut(s)	298, 533, 1028
BstNSI	RCATGY	1 cut(s)	147
BstPI	GGTNACC	1 cut(s)	288
BstSCI	CCNGG	3 cut(s)	296, 531, 1026
BstSFI	CTRYAG	1 cut(s)	894
BstSLI	GKGCMC	1 cut(s)	375
BstV1I	GCAGC	1 cut(s)	617
BstV2I	GAAGAC	1 cut(s)	139
BstX2I	RGATCY	2 cut(s)	667, 987
BstXI	CCANNNNNNTGG	1 cut(s)	1034
BstYI	RGATCY	2 cut(s)	667, 987
BsuRI	GGCC	3 cut(s)	207, 412, 461
BtsCI	GGATG	4 cut(s)	22, 468, 758, 759
BtsIMutI	CAGTG	3 cut(s)	126, 373, 647
BveI	ACCTGC	3 cut(s)	331, 616, 716
CaiI	CAGNNNCTG	1 cut(s)	671
CfoI	GCGC	2 cut(s)	282, 767
Cfr13I	GGNCC	1 cut(s)	410
Csp6I	GTAC	1 cut(s)	1007
CviAII	CATG	4 cut(s)	144, 157, 248, 457
CviQI	GTAC	1 cut(s)	1007
DdeI	CTNAG	5 cut(s)	138, 162, 261, 319, 650
DpnI	GATC	3 cut(s)	669, 863, 989
DpnII	GATC	3 cut(s)	667, 861, 987
DraI	TTTAAA	1 cut(s)	60
EaeI	YGGCCR	1 cut(s)	205
Ecl136II	GAGCTC	1 cut(s)	830
Eco130I	CCWWGG	2 cut(s)	692, 936
Eco24I	GRGCYC	1 cut(s)	832
Eco53kI	GAGCTC	1 cut(s)	830
Eco57I	CTGAAG	1 cut(s)	426
Eco91I	GGTNACC	1 cut(s)	288
EcoICRI	GAGCTC	1 cut(s)	830
EcoO65I	GGTNACC	1 cut(s)	288
EcoRII	CCWGG	3 cut(s)	296, 531, 1026
EcoT14I	CCWWGG	2 cut(s)	692, 936
EcoT38I	GRGCYC	1 cut(s)	832
ErhI	CCWWGG	2 cut(s)	692, 936
Esp3I	CGTCTC	1 cut(s)	263
FaeI	CATG	4 cut(s)	147, 160, 251, 460
FatI	CATG	4 cut(s)	143, 156, 247, 456
FbaI	TGATCA	1 cut(s)	861
Fnu4HI	GCNGC	1 cut(s)	606
FokI	GGATG	4 cut(s)	9, 455, 745, 766
FriOI	GRGCYC	1 cut(s)	832
Fsp4HI	GCNGC	1 cut(s)	606
FspBI	CTAG	1 cut(s)	492
FspI	TGCGCA	1 cut(s)	281
GlaI	GCGC	2 cut(s)	281, 766
GluI	GCNGC	1 cut(s)	606
GsaI	CCCAGC	3 cut(s)	339, 585, 617
GsuI	CTGGAG	1 cut(s)	397
HaeII	RGCGCY	1 cut(s)	768
HaeIII	GGCC	3 cut(s)	207, 412, 461
HhaI	GCGC	2 cut(s)	282, 767
Hin1II	CATG	4 cut(s)	147, 160, 251, 460
Hin6I	GCGC	2 cut(s)	280, 765
HinP1I	GCGC	2 cut(s)	280, 765
HinfI	GANTC	9 cut(s)	233, 315, 553, 688, 730, 815, 950, 1040, 1051
HphI	GGTGA	2 cut(s)	282, 709
Hpy166II	GTNNAC	1 cut(s)	373
Hpy188I	TCNGA	6 cut(s)	43, 141, 262, 634, 729, 825
Hpy8I	GTNNAC	1 cut(s)	373
HpyAV	CCTTC	1 cut(s)	222
HpyCH4III	ACNGT	2 cut(s)	274, 748
HpyF10VI	GCNNNNNNNGC	5 cut(s)	605, 764, 773, 827, 881
HpyF3I	CTNAG	5 cut(s)	138, 162, 261, 319, 650
Hsp92II	CATG	4 cut(s)	147, 160, 251, 460
HspAI	GCGC	2 cut(s)	280, 765
Ksp22I	TGATCA	1 cut(s)	861
Kzo9I	GATC	3 cut(s)	667, 861, 987
LmnI	GCTCC	1 cut(s)	932
Lsp1109I	GCAGC	1 cut(s)	617
LweI	GCATC	1 cut(s)	767
MaeI	CTAG	1 cut(s)	492
MaeIII	GTNAC	4 cut(s)	288, 685, 867, 916
MalI	GATC	3 cut(s)	669, 863, 989
MbiI	CCGCTC	1 cut(s)	124
MboI	GATC	3 cut(s)	667, 861, 987
MboII	GAAGA	5 cut(s)	11, 60, 144, 242, 1015
MfeI	CAATTG	1 cut(s)	570
MflI	RGATCY	2 cut(s)	667, 987
MhlI	GDGCHC	2 cut(s)	375, 832
MlsI	TGGCCA	1 cut(s)	207
MluNI	TGGCCA	1 cut(s)	207
MlyI	GAGTC	4 cut(s)	562, 682, 724, 824
MmeI	TCCRAC	2 cut(s)	415, 1015
MnlI	CCTC	6 cut(s)	147, 303, 303, 779, 847, 923
Mox20I	TGGCCA	1 cut(s)	207
MscI	TGGCCA	1 cut(s)	207
MseI	TTAA	7 cut(s)	59, 78, 359, 398, 437, 503, 801
Msp20I	TGGCCA	1 cut(s)	207
MspR9I	CCNGG	3 cut(s)	298, 533, 1028
MunI	CAATTG	1 cut(s)	570
MvaI	CCWGG	3 cut(s)	298, 533, 1028
MwoI	GCNNNNNNNGC	5 cut(s)	605, 764, 773, 827, 881
NdeII	GATC	3 cut(s)	667, 861, 987
NlaIII	CATG	4 cut(s)	147, 160, 251, 460
NlaIV	GGNNCC	1 cut(s)	934
NmuCI	GTSAC	3 cut(s)	288, 685, 867
NsbI	TGCGCA	1 cut(s)	281
NspI	RCATGY	1 cut(s)	147
PciI	ACATGT	1 cut(s)	143
PfeI	GAWTC	5 cut(s)	233, 315, 950, 1040, 1051
PkrI	GCNGC	1 cut(s)	607
PleI	GAGTC	4 cut(s)	561, 682, 724, 823
PpsI	GAGTC	4 cut(s)	561, 682, 724, 823
PscI	ACATGT	1 cut(s)	143
Psp124BI	GAGCTC	1 cut(s)	832
Psp6I	CCWGG	3 cut(s)	296, 531, 1026
PspEI	GGTNACC	1 cut(s)	288
PspFI	CCCAGC	3 cut(s)	335, 581, 613
PspGI	CCWGG	3 cut(s)	296, 531, 1026
PspN4I	GGNNCC	1 cut(s)	934
PspPI	GGNCC	1 cut(s)	410
PstNI	CAGNNNCTG	1 cut(s)	671
PsuI	RGATCY	2 cut(s)	667, 987
RsaI	GTAC	1 cut(s)	1008
RsaNI	GTAC	1 cut(s)	1007
SacI	GAGCTC	1 cut(s)	832
SaqAI	TTAA	7 cut(s)	59, 78, 359, 398, 437, 503, 801
SatI	GCNGC	1 cut(s)	606
Sau3AI	GATC	3 cut(s)	667, 861, 987
Sau96I	GGNCC	1 cut(s)	410
SchI	GAGTC	4 cut(s)	562, 682, 724, 824
ScrFI	CCNGG	3 cut(s)	298, 533, 1028
SduI	GDGCHC	2 cut(s)	375, 832
SfaNI	GCATC	1 cut(s)	767
SfcI	CTRYAG	1 cut(s)	894
SmlI	CTYRAG	1 cut(s)	541
SmoI	CTYRAG	1 cut(s)	541
SsiI	CCGC	2 cut(s)	9, 122
SspMI	CTAG	1 cut(s)	492
SstI	GAGCTC	1 cut(s)	832
StyD4I	CCNGG	3 cut(s)	296, 531, 1026
StyI	CCWWGG	2 cut(s)	692, 936
TaaI	ACNGT	2 cut(s)	274, 748
TatI	WGTACW	1 cut(s)	1006
TfiI	GAWTC	5 cut(s)	233, 315, 950, 1040, 1051
Tru1I	TTAA	7 cut(s)	59, 78, 359, 398, 437, 503, 801
Tru9I	TTAA	7 cut(s)	59, 78, 359, 398, 437, 503, 801
TscAI	CASTG	3 cut(s)	133, 380, 654
TseFI	GTSAC	3 cut(s)	288, 685, 867
TseI	GCWGC	1 cut(s)	605
Tsp45I	GTSAC	3 cut(s)	288, 685, 867
TspDTI	ATGAA	2 cut(s)	11, 1032
TspGWI	ACGGA	1 cut(s)	15
TspRI	CASTG	3 cut(s)	133, 380, 654
VneI	GTGCAC	1 cut(s)	371
XapI	RAATTY	3 cut(s)	415, 485, 783
XceI	RCATGY	1 cut(s)	147
XspI	CTAG	1 cut(s)	492

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.