Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0007305

Physical Location & Seq

Genomic Coordinates Reverse (-)

8832178 .. 8835647

Gene Structure 3470 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0100000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2385 bp

ATGGCTACCATTGTCACTTTGCTCGTTTATTTTTCCATTGCCTCTTCTTTCTTCGTTTCTTCTAATGCTGGAAGAAAACTTCTCGACTCTACCAATGGAGCCACTAACTTTACCATTGTGTGTGATCCTTCAACGTACTCCAACCTTGGCCTGAACATATCTGACTTTGCCTTCTGCGACTCAGCCTTGCCGTACGATGCTAGGGTCAAAGACTTGGTGGATAGGATGACCTTGGCAGAGAAAGTGCAGCAGCTCGGAAACAAAGCAGCTGGGGTGCCTAGACTAGGCTTGCCCAAGTACGAGTGGTGGTCTGAGGCACTCCACGGTGTATCCAACGTCGGTCCAGGTACGTACTTTGATGATGTTGTTCCCGGTGCAACAAGCTTCCCCCCTGTCATTCTCACCGCCGCGGCATTCAACGAGTCCTTGTGGAAGGAGATTGGTCAGGTTGTTTCAACAGAAGCAAGAGCCATGTACAACCTAGGAAGGGCTGGATTGACATATTGGAGTCCCAATATCAATGTAGTGAGGGATCCAAGGTGGGGAAGAGCCACAGAGACGCCCGGTGAAGACCCTTATGTTGTTGGAGCTTATGCTATAAACTATGTCCGAGGCTTGCAAGATGTTAAGGGTACAGAGAATTTTACAGACTTGAACTCTAGGCCTCTTAAGGTCTCCTCTTGCTGCAAGCACTATGCTGCCTATGATGTTGATAACTGGCTTGGTGTGGATCGTTACCATTTTGATGCCCAGGTTACGGAGCAAGATATGTCAGAGACTTTCCTTAAACCATTTGAGATGTGTGTTAAAGATGGTGATGTTAGTAGTGTAATGTGCTCCTACAACAGGATTAATGGAATACCAGCTTGTGCTGATACAAAGCTCTTGAAAGATACCATTAGAGGAGAATGGGATCTTCATGGATACATTGTCTCAGATTGTGACTCTCTAGAAGTAATGGTGAATGGCCATAAATGGCTTGGTGACACTGGAGTGGAAGCTTCTGCACAAGCATTAAAAGCAGGGATGGATTTGGACTGTGGAGTCTACTACCCTAATTTCACTGAGTCTGCTGTGAAACAAGGGAAGGTAAAGGTCAAAGAAATAGACAATTCTTTGAAGCAGCTTTATGTGGTACTTATGAGGCTAGGCTTTTTTGATGGAAACCCTATTTACAACTCACTTGGCAAGAAAGATGTGTGCTCCCAAGAACACATTGAATTGGCAAGAGAAGCAGCCAAAGAAGGAATTGTTTTACTAAAAAATGCCAATGAAACTTTGCCTGTCAACTCTTACAAGATCAAGAAATTGGCCGTGGTCGGGCCTCATGCCAATGCTACTACAGCTATGATTGGAAATTATGCAGGTATTCCTTGCAAGTTCATCTCACCTCTTGATGCTTTTTCGAAATATGGAGAAGTGAAGTATGAAGTGGGATGTGATGTTAAGTGTCCAAATGAGAGCCTGATATTCCCAGCCATGCAAGCTGCAAAGGAAGCTGATGTGACAATAATTTTTGCTGGATTAGACTTATCAGTTGAGGCTGAGAGCTTGGACAGGACTGATCTTCTTCTCCCGGGGTATCAAACCCAATTCATCAACCAAGTTGCTCAAGTGTCAAAAGGTCCGGTAATTCTTGTGATAATGTCTGCAGGGGGTGTTGATATCAACTTTGCCAAGAACAATGATAACATCAAAGCCATTTTGTGGGCTGGATACCCTGGTGAGCAAGGTGGCTGTGCCATTGCAGATGTTGTTTTTGGACATTACAATCCTGGTGGAAGATTACCTCTTACATGGTACCCAGCTGATTATGTGGATATGCTACCCTTAACCTCCATGCCATTGAGGCCAATTGATAGCTTAGGATATCCTGGTCGTACATACAAGTTCTACAATGGATCCACAGTTTACCCATTTGGATATGGTCTTAGCTACACCAAATTCAACTACACTATACTATCTGCAAAGAAATCTGTAGACATAAAGTTGGAGAAGACCCAACACTGCCGTGACTTGGAGTACAAAGGAGGGGAAAACAAACCAGCTTGCCCTTCAGTCCTTATTGATGACTTGGACCGCCAATATGATTTCGAGTTTGAGGTTGAAGTACAAAATGTGGGCGGAAGGGATGGAGGTGAAGTCATTATAGTTTACTCTAAACCCCCAAGTGGCATTGCCTCTACACATGCTAAGCAGGTTATTGGGTTTCAGAGGGTGTTTGTTGAAGCTGGCAAGAGTGAGAAAGTCAAATTTGTCTTCAATGTTTACAAGAGCTTGGGAATTGTTGATTATACAGCTTATAATCTTTTACCATCAGGCAGCCACACCATTTCGCTCGGAGACGATCTGGTTACATTCCCTCTCCAAGTTAACCTTGTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005319 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006810 GO:0006869 GO:0008150 GO:0009507 GO:0009526 GO:0009527 GO:0009528 GO:0009536 GO:0009706 GO:0009707 GO:0009941 GO:0010876 GO:0016020 GO:0019866 GO:0019867 GO:0031090 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0033036 GO:0042170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0071702 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MlaE PUNUT

Protein Analysis

794

Amino Acids

87.11

Weight (kDa)

5.23

Isoelectric Point (pI)

27.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_3	PF00933	125 - 376	2.7e-35	Glycosyl hydrolase family 3 N terminal domain
Glyco_hydro_3_C	PF01915	417 - 646	1.2e-49	Glycosyl hydrolase family 3 C-terminal domain
Fn3-like	PF14310	714 - 782	2.7e-09	Fibronectin type III-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007305)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19800 AT1G19800 AT1G19800 AT1G19800 AT1G19800 AT1G19800
fragaria_vesca	FvH4_3g16560
malus_domestica	MD05G1209200.v1.1 MD10G1195600.v1.1
prunus_persica	Prupe.4G148300_v2.0.a1 Prupe.4G148300_v2.0.a1
pyrus_communis	pycom05g19530
rosa_chinensis	RchiOBHm_Chr5g0027591
rosa_laevigata	RLG00000033031
rosa_multiflora	Rmu_sc0001647.1_g000008 Rmu_sc0011056.1_g000002
rosa_roxburghii	Rroxscaffold_1G00051940
rosa_rugosa	Rorug05G0099900 Rorug05G0099900 Rorug05G0100000
rosa_samantha	Rh5AG194300 Rh5BG192400 Rh5CG212400 Rh5DG194100
rosa_wichuraiana	Rw5G017710

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2304
AasI	GACNNNNNNGTC	1 cut(s)	1043
Acc36I	ACCTGC	2 cut(s)	1355, 2188
Acc65I	GGTACC	1 cut(s)	1800
AccB1I	GGYRCC	2 cut(s)	274, 1800
AccB7I	CCANNNNNTGG	1 cut(s)	1707
AccI	GTMKAC	2 cut(s)	1047, 1980
AccII	CGCG	1 cut(s)	410
AciI	CCGC	5 cut(s)	405, 408, 410, 2080, 2124
AclWI	GGATC	7 cut(s)	119, 527, 540, 738, 921, 1896, 1909
AcoI	YGGCCR	2 cut(s)	967, 1311
AcsI	RAATTY	3 cut(s)	640, 1943, 2252
AcuI	CTGAAG	1 cut(s)	2040
AcyI	GRCGYC	1 cut(s)	560
AfiI	CCNNNNNNNGG	9 cut(s)	284, 487, 542, 757, 846, 1320, 1707, 2017, 2171
AflII	CTTAAG	1 cut(s)	668
AjnI	CCWGG	5 cut(s)	343, 750, 1720, 1774, 1873
AleI	CACNNNNGTG	2 cut(s)	992, 2010
Alw21I	GWGCWC	2 cut(s)	839, 1205
Alw26I	GTCTC	5 cut(s)	551, 679, 770, 937, 2337
AlwI	GGATC	7 cut(s)	119, 527, 540, 738, 921, 1896, 1909
Ama87I	CYCGRG	1 cut(s)	1576
AoxI	GGCC	6 cut(s)	148, 662, 967, 1311, 1322, 1850
ApeKI	GCWGC	9 cut(s)	247, 250, 266, 684, 698, 1123, 1235, 1487, 2322
ApoI	RAATTY	3 cut(s)	640, 1943, 2252
AseI	ATTAAT	1 cut(s)	852
Asp718I	GGTACC	1 cut(s)	1800
AspA2I	CCTAGG	1 cut(s)	481
AspS9I	GGNCC	4 cut(s)	341, 1322, 1625, 2077
AsuC2I	CCSGG	4 cut(s)	372, 564, 1577, 1578
AsuHPI	GGTGA	8 cut(s)	394, 578, 827, 973, 995, 1380, 1736, 2150
AsuII	TTCGAA	1 cut(s)	1406
AvaI	CYCGRG	1 cut(s)	1576
AvaII	GGWCC	3 cut(s)	341, 1625, 2077
AvrII	CCTAGG	1 cut(s)	481
BaeI	ACNNNNGTAYC	2 cut(s)	1708, 1741
BalI	TGGCCA	1 cut(s)	969
BamHI	GGATCC	2 cut(s)	532, 1901
BanI	GGYRCC	2 cut(s)	274, 1800
BbsI	GAAGAC	3 cut(s)	576, 2003, 2251
Bbv12I	GWGCWC	2 cut(s)	839, 1205
BbvI	GCAGC	9 cut(s)	259, 262, 278, 671, 685, 1135, 1247, 1474, 2334
BccI	CCATC	5 cut(s)	806, 1021, 1154, 2126, 2323
BceAI	ACGGC	3 cut(s)	175, 1298, 1995
BciT130I	CCWGG	5 cut(s)	345, 752, 1722, 1776, 1875
BciVI	GTATCC	3 cut(s)	340, 917, 1709
BcnI	CCSGG	4 cut(s)	372, 564, 1577, 1578
BcoDI	GTCTC	5 cut(s)	551, 679, 770, 937, 2337
BfaI	CTAG	7 cut(s)	201, 279, 284, 482, 660, 950, 1148
BfmI	CTRYAG	3 cut(s)	1341, 1650, 1977
BfrI	CTTAAG	1 cut(s)	668
BfuAI	ACCTGC	2 cut(s)	1355, 2188
BfuI	GTATCC	3 cut(s)	340, 917, 1709
BglI	GCCNNNNNGGC	1 cut(s)	1849
BlnI	CCTAGG	1 cut(s)	481
BlpI	GCTNAGC	1 cut(s)	2193
Bme1390I	CCNGG	9 cut(s)	345, 372, 564, 752, 1577, 1578, 1722, 1776, 1875
Bme18I	GGWCC	3 cut(s)	341, 1625, 2077
BmeT110I	CYCGRG	1 cut(s)	1576
BmgT120I	GGNCC	4 cut(s)	341, 1322, 1625, 2077
BmiI	GGNNCC	5 cut(s)	100, 276, 534, 1802, 1903
BmrFI	CCNGG	9 cut(s)	345, 372, 564, 752, 1577, 1578, 1722, 1776, 1875
BmsI	GCATC	3 cut(s)	187, 736, 1387
BpiI	GAAGAC	3 cut(s)	576, 2003, 2251
BpmI	CTGGAG	1 cut(s)	1011
Bpu10I	CCTNAGC	1 cut(s)	1864
Bpu1102I	GCTNAGC	1 cut(s)	2193
Bpu14I	TTCGAA	1 cut(s)	1406
BpuEI	CTTGAG	1 cut(s)	1596
BpuMI	CCSGG	4 cut(s)	372, 564, 1577, 1578
BsaAI	YACGTR	1 cut(s)	351
BsaHI	GRCGYC	1 cut(s)	560
BsaI	GGTCTC	1 cut(s)	679
BsaWI	WCCGGW	1 cut(s)	1627
BsaXI	ACNNNNNCTCC	2 cut(s)	2127, 2157
Bsc4I	CCNNNNNNNGG	9 cut(s)	284, 487, 542, 757, 846, 1320, 1707, 2017, 2171
Bse1I	ACTGG	2 cut(s)	722, 994
Bse3DI	GCAATG	3 cut(s)	36, 1743, 2175
BseBI	CCWGG	5 cut(s)	345, 752, 1722, 1776, 1875
BseGI	GGATG	4 cut(s)	231, 1032, 1442, 2137
BseLI	CCNNNNNNNGG	9 cut(s)	284, 487, 542, 757, 846, 1320, 1707, 2017, 2171
BseMI	GCAATG	3 cut(s)	36, 1743, 2175
BseMII	CTCAG	5 cut(s)	195, 303, 948, 1056, 1536
BseNI	ACTGG	2 cut(s)	722, 994
BseRI	GAGGAG	2 cut(s)	667, 918
BseXI	GCAGC	9 cut(s)	259, 262, 278, 671, 685, 1135, 1247, 1474, 2334
BseYI	CCCAGC	3 cut(s)	269, 1474, 1804
BsgI	GTGCAG	2 cut(s)	266, 990
Bsh1236I	CGCG	1 cut(s)	410
BshFI	GGCC	6 cut(s)	150, 664, 969, 1313, 1324, 1852
BshNI	GGYRCC	2 cut(s)	274, 1800
BsiHKAI	GWGCWC	2 cut(s)	839, 1205
BsiHKCI	CYCGRG	1 cut(s)	1576
BsiSI	CCGG	4 cut(s)	372, 564, 1577, 1628
BsiWI	CGTACG	1 cut(s)	192
BslFI	GGGAC	1 cut(s)	495
BslI	CCNNNNNNNGG	9 cut(s)	284, 487, 542, 757, 846, 1320, 1707, 2017, 2171
BsmAI	GTCTC	5 cut(s)	551, 679, 770, 937, 2337
BsmBI	CGTCTC	2 cut(s)	551, 2337
BsmFI	GGGAC	1 cut(s)	495
BsmI	GAATGC	1 cut(s)	413
BsnI	GGCC	6 cut(s)	150, 664, 969, 1313, 1324, 1852
Bso31I	GGTCTC	1 cut(s)	679
BsoBI	CYCGRG	1 cut(s)	1576
Bsp119I	TTCGAA	1 cut(s)	1406
Bsp1286I	GDGCHC	2 cut(s)	839, 1205
Bsp1407I	TGTACA	1 cut(s)	474
Bsp143I	GATC	8 cut(s)	124, 532, 730, 913, 1299, 1564, 1901, 2347
Bsp1720I	GCTNAGC	1 cut(s)	2193
BspACI	CCGC	5 cut(s)	405, 408, 410, 2080, 2124
BspANI	GGCC	6 cut(s)	150, 664, 969, 1313, 1324, 1852
BspCNI	CTCAG	5 cut(s)	194, 304, 947, 1057, 1537
BspFNI	CGCG	1 cut(s)	410
BspLI	GGNNCC	5 cut(s)	100, 276, 534, 1802, 1903
BspMAI	CTGCAG	1 cut(s)	1654
BspMI	ACCTGC	2 cut(s)	1355, 2188
BspPI	GGATC	7 cut(s)	119, 527, 540, 738, 921, 1896, 1909
BspQI	GCTCTTC	1 cut(s)	541
BspT104I	TTCGAA	1 cut(s)	1406
BspT107I	GGYRCC	2 cut(s)	274, 1800
BspTI	CTTAAG	1 cut(s)	668
BspTNI	GGTCTC	1 cut(s)	679
BsrDI	GCAATG	3 cut(s)	36, 1743, 2175
BsrGI	TGTACA	1 cut(s)	474
BsrI	ACTGG	2 cut(s)	722, 994
BssMI	GATC	8 cut(s)	124, 532, 730, 913, 1299, 1564, 1901, 2347
BssNI	GRCGYC	1 cut(s)	560
BssT1I	CCWWGG	4 cut(s)	145, 231, 481, 536
Bst2UI	CCWGG	5 cut(s)	345, 752, 1722, 1776, 1875
Bst4CI	ACNGT	3 cut(s)	326, 1040, 1909
Bst6I	CTCTTC	2 cut(s)	49, 541
BstACI	GRCGYC	1 cut(s)	560
BstAFI	CTTAAG	1 cut(s)	668
BstAUI	TGTACA	1 cut(s)	474
BstBAI	YACGTR	1 cut(s)	351
BstBI	TTCGAA	1 cut(s)	1406
BstC8I	GCNNGC	6 cut(s)	290, 617, 689, 1485, 2050, 2233
BstDEI	CTNAG	8 cut(s)	181, 312, 934, 1065, 1545, 1864, 1931, 2193
BstDSI	CCRYGG	3 cut(s)	322, 408, 1314
BstENI	CCTNNNNNAGG	2 cut(s)	282, 844
BstF5I	GGATG	4 cut(s)	231, 1032, 1442, 2137
BstFNI	CGCG	1 cut(s)	410
BstKTI	GATC	8 cut(s)	127, 535, 733, 916, 1302, 1567, 1904, 2350
BstMAI	GTCTC	5 cut(s)	551, 679, 770, 937, 2337
BstMBI	GATC	8 cut(s)	124, 532, 730, 913, 1299, 1564, 1901, 2347
BstMWI	GCNNNNNNNGC	6 cut(s)	1019, 1232, 1343, 1484, 1496, 1849
BstNI	CCWGG	5 cut(s)	345, 752, 1722, 1776, 1875
BstNSI	RCATGY	1 cut(s)	2192
BstSCI	CCNGG	9 cut(s)	343, 370, 562, 750, 1575, 1576, 1720, 1774, 1873
BstSFI	CTRYAG	3 cut(s)	1341, 1650, 1977
BstSNI	TACGTA	1 cut(s)	351
BstUI	CGCG	1 cut(s)	410
BstV1I	GCAGC	9 cut(s)	259, 262, 278, 671, 685, 1135, 1247, 1474, 2334
BstV2I	GAAGAC	3 cut(s)	576, 2003, 2251
BstX2I	RGATCY	3 cut(s)	532, 913, 1901
BstYI	RGATCY	3 cut(s)	532, 913, 1901
BsuI	GTATCC	3 cut(s)	340, 917, 1709
BsuRI	GGCC	6 cut(s)	150, 664, 969, 1313, 1324, 1852
BtgI	CCRYGG	3 cut(s)	322, 408, 1314
BtsCI	GGATG	4 cut(s)	231, 1032, 1442, 2137
BtsI	GCAGTG	1 cut(s)	2005
BtsIMutI	CAGTG	3 cut(s)	987, 1062, 2005
BveI	ACCTGC	2 cut(s)	1355, 2188
Cac8I	GCNNGC	6 cut(s)	290, 617, 689, 1485, 2050, 2233
Cfr13I	GGNCC	4 cut(s)	341, 1322, 1625, 2077
Cfr42I	CCGCGG	1 cut(s)	411
Cfr9I	CCCGGG	1 cut(s)	1576
CseI	GACGC	1 cut(s)	568
CspCI	CAANNNNNGTGG	2 cut(s)	1759, 1794
CviAII	CATG	7 cut(s)	472, 920, 1328, 1480, 1797, 1840, 2189
DdeI	CTNAG	8 cut(s)	181, 312, 934, 1065, 1545, 1864, 1931, 2193
DpnI	GATC	8 cut(s)	126, 534, 732, 915, 1301, 1566, 1903, 2349
DpnII	GATC	8 cut(s)	124, 532, 730, 913, 1299, 1564, 1901, 2347
DrdI	GACNNNNNNGTC	1 cut(s)	1043
DseDI	GACNNNNNNGTC	1 cut(s)	1043
EaeI	YGGCCR	2 cut(s)	967, 1311
Eam1104I	CTCTTC	2 cut(s)	49, 541
EarI	CTCTTC	2 cut(s)	49, 541
EciI	GGCGGA	1 cut(s)	2139
Eco105I	TACGTA	1 cut(s)	351
Eco130I	CCWWGG	4 cut(s)	145, 231, 481, 536
Eco147I	AGGCCT	1 cut(s)	664
Eco31I	GGTCTC	1 cut(s)	679
Eco32I	GATATC	2 cut(s)	1666, 1871
Eco47I	GGWCC	3 cut(s)	341, 1625, 2077
Eco57I	CTGAAG	1 cut(s)	2040
Eco88I	CYCGRG	1 cut(s)	1576
EcoNI	CCTNNNNNAGG	2 cut(s)	282, 844
EcoRII	CCWGG	5 cut(s)	343, 750, 1720, 1774, 1873
EcoRV	GATATC	2 cut(s)	1666, 1871
EcoT14I	CCWWGG	4 cut(s)	145, 231, 481, 536
ErhI	CCWWGG	4 cut(s)	145, 231, 481, 536
Esp3I	CGTCTC	2 cut(s)	551, 2337
FaeI	CATG	7 cut(s)	475, 923, 1331, 1483, 1800, 1843, 2192
FalI	AAGNNNNNCTT	1 cut(s)	2361
FaqI	GGGAC	1 cut(s)	495
FatI	CATG	7 cut(s)	471, 919, 1327, 1479, 1796, 1839, 2188
FblI	GTMKAC	2 cut(s)	1047, 1980
FokI	GGATG	4 cut(s)	238, 1039, 1449, 2144
FspBI	CTAG	7 cut(s)	201, 279, 284, 482, 660, 950, 1148
GsaI	CCCAGC	3 cut(s)	273, 1478, 1808
GsuI	CTGGAG	1 cut(s)	1011
HaeIII	GGCC	6 cut(s)	150, 664, 969, 1313, 1324, 1852
HapII	CCGG	4 cut(s)	372, 564, 1577, 1628
HgaI	GACGC	1 cut(s)	568
Hin1I	GRCGYC	1 cut(s)	560
Hin1II	CATG	7 cut(s)	475, 923, 1331, 1483, 1800, 1843, 2192
HincII	GTYRAC	2 cut(s)	1288, 2374
HindII	GTYRAC	2 cut(s)	1288, 2374
HindIII	AAGCTT	2 cut(s)	382, 999
HinfI	GANTC	7 cut(s)	86, 179, 422, 508, 944, 1044, 1067
HpaI	GTTAAC	1 cut(s)	2374
HpaII	CCGG	4 cut(s)	372, 564, 1577, 1628
HphI	GGTGA	8 cut(s)	394, 578, 827, 973, 995, 1380, 1736, 2150
Hpy166II	GTNNAC	7 cut(s)	1048, 1288, 1912, 1981, 2155, 2269, 2374
Hpy188I	TCNGA	8 cut(s)	163, 257, 313, 611, 775, 937, 2214, 2342
Hpy188III	TCNNGA	5 cut(s)	83, 886, 950, 1303, 1394
Hpy8I	GTNNAC	7 cut(s)	1048, 1288, 1912, 1981, 2155, 2269, 2374
Hpy99I	CGWCG	1 cut(s)	341
HpyAV	CCTTC	8 cut(s)	138, 181, 427, 480, 1081, 1238, 2064, 2121
HpyCH4III	ACNGT	3 cut(s)	326, 1040, 1909
HpyCH4IV	ACGT	3 cut(s)	134, 336, 350
HpyF10VI	GCNNNNNNNGC	6 cut(s)	1019, 1232, 1343, 1484, 1496, 1849
HpyF3I	CTNAG	8 cut(s)	181, 312, 934, 1065, 1545, 1864, 1931, 2193
HpySE526I	ACGT	3 cut(s)	134, 336, 350
Hsp92I	GRCGYC	1 cut(s)	560
Hsp92II	CATG	7 cut(s)	475, 923, 1331, 1483, 1800, 1843, 2192
KpnI	GGTACC	1 cut(s)	1804
KspAI	GTTAAC	1 cut(s)	2374
KspI	CCGCGG	1 cut(s)	411
Kzo9I	GATC	8 cut(s)	124, 532, 730, 913, 1299, 1564, 1901, 2347
LguI	GCTCTTC	1 cut(s)	541
LmnI	GCTCC	5 cut(s)	98, 587, 760, 842, 1208
Lsp1109I	GCAGC	9 cut(s)	259, 262, 278, 671, 685, 1135, 1247, 1474, 2334
LweI	GCATC	3 cut(s)	187, 736, 1387
MaeI	CTAG	7 cut(s)	201, 279, 284, 482, 660, 950, 1148
MaeII	ACGT	3 cut(s)	134, 336, 350
MaeIII	GTNAC	8 cut(s)	13, 734, 754, 941, 983, 1504, 2012, 2353
MalI	GATC	8 cut(s)	126, 534, 732, 915, 1301, 1566, 1903, 2349
MboI	GATC	8 cut(s)	124, 532, 730, 913, 1299, 1564, 1901, 2347
MfeI	CAATTG	1 cut(s)	1854
MflI	RGATCY	3 cut(s)	532, 913, 1901
MhlI	GDGCHC	2 cut(s)	839, 1205
MlsI	TGGCCA	1 cut(s)	969
MluNI	TGGCCA	1 cut(s)	969
MlyI	GAGTC	7 cut(s)	80, 173, 431, 517, 938, 1053, 1076
MmeI	TCCRAC	4 cut(s)	165, 357, 565, 1971
Mox20I	TGGCCA	1 cut(s)	969
MscI	TGGCCA	1 cut(s)	969
MseI	TTAA	9 cut(s)	627, 669, 786, 807, 852, 1016, 1446, 1832, 2373
MslI	CAYNNNNRTG	4 cut(s)	744, 992, 1332, 2010
Msp20I	TGGCCA	1 cut(s)	969
MspA1I	CMGCKG	3 cut(s)	269, 410, 1808
MspCI	CTTAAG	1 cut(s)	668
MspI	CCGG	4 cut(s)	372, 564, 1577, 1628
MspR9I	CCNGG	9 cut(s)	345, 372, 564, 752, 1577, 1578, 1722, 1776, 1875
MunI	CAATTG	1 cut(s)	1854
Mva1269I	GAATGC	1 cut(s)	413
MvaI	CCWGG	5 cut(s)	345, 752, 1722, 1776, 1875
MvnI	CGCG	1 cut(s)	410
MwoI	GCNNNNNNNGC	6 cut(s)	1019, 1232, 1343, 1484, 1496, 1849
NciI	CCSGG	4 cut(s)	372, 564, 1577, 1578
NdeII	GATC	8 cut(s)	124, 532, 730, 913, 1299, 1564, 1901, 2347
NlaIII	CATG	7 cut(s)	475, 923, 1331, 1483, 1800, 1843, 2192
NlaIV	GGNNCC	5 cut(s)	100, 276, 534, 1802, 1903
NmuCI	GTSAC	5 cut(s)	13, 941, 983, 1504, 2012
NspI	RCATGY	1 cut(s)	2192
NspV	TTCGAA	1 cut(s)	1406
OliI	CACNNNNGTG	2 cut(s)	992, 2010
PceI	AGGCCT	1 cut(s)	664
PciSI	GCTCTTC	1 cut(s)	541
PctI	GAATGC	1 cut(s)	413
Pfl23II	CGTACG	1 cut(s)	192
PflMI	CCANNNNNTGG	1 cut(s)	1707
PleI	GAGTC	7 cut(s)	80, 173, 430, 516, 938, 1052, 1075
PpsI	GAGTC	7 cut(s)	80, 173, 430, 516, 938, 1052, 1075
Ppu21I	YACGTR	1 cut(s)	351
PshBI	ATTAAT	1 cut(s)	852
PsiI	TTATAA	1 cut(s)	2304
Psp6I	CCWGG	5 cut(s)	343, 750, 1720, 1774, 1873
PspFI	CCCAGC	3 cut(s)	269, 1474, 1804
PspGI	CCWGG	5 cut(s)	343, 750, 1720, 1774, 1873
PspLI	CGTACG	1 cut(s)	192
PspN4I	GGNNCC	5 cut(s)	100, 276, 534, 1802, 1903
PspPI	GGNCC	4 cut(s)	341, 1322, 1625, 2077
PstI	CTGCAG	1 cut(s)	1654
PsuI	RGATCY	3 cut(s)	532, 913, 1901
PvuII	CAGCTG	2 cut(s)	269, 1808
RseI	CAYNNNNRTG	4 cut(s)	744, 992, 1332, 2010
SacII	CCGCGG	1 cut(s)	411
SapI	GCTCTTC	1 cut(s)	541
SaqAI	TTAA	9 cut(s)	627, 669, 786, 807, 852, 1016, 1446, 1832, 2373
Sau3AI	GATC	8 cut(s)	124, 532, 730, 913, 1299, 1564, 1901, 2347
Sau96I	GGNCC	4 cut(s)	341, 1322, 1625, 2077
SchI	GAGTC	7 cut(s)	80, 173, 431, 517, 938, 1053, 1076
ScrFI	CCNGG	9 cut(s)	345, 372, 564, 752, 1577, 1578, 1722, 1776, 1875
SduI	GDGCHC	2 cut(s)	839, 1205
SfaNI	GCATC	3 cut(s)	187, 736, 1387
SfcI	CTRYAG	3 cut(s)	1341, 1650, 1977
Sfr303I	CCGCGG	1 cut(s)	411
SfuI	TTCGAA	1 cut(s)	1406
SgrBI	CCGCGG	1 cut(s)	411
SinI	GGWCC	3 cut(s)	341, 1625, 2077
SmaI	CCCGGG	1 cut(s)	1578
SmiMI	CAYNNNNRTG	4 cut(s)	744, 992, 1332, 2010
SmlI	CTYRAG	2 cut(s)	668, 1611
SmoI	CTYRAG	2 cut(s)	668, 1611
SnaBI	TACGTA	1 cut(s)	351
SseBI	AGGCCT	1 cut(s)	664
SsiI	CCGC	5 cut(s)	405, 408, 410, 2080, 2124
SspMI	CTAG	7 cut(s)	201, 279, 284, 482, 660, 950, 1148
StuI	AGGCCT	1 cut(s)	664
StyD4I	CCNGG	9 cut(s)	343, 370, 562, 750, 1575, 1576, 1720, 1774, 1873
StyI	CCWWGG	4 cut(s)	145, 231, 481, 536
TaaI	ACNGT	3 cut(s)	326, 1040, 1909
TaiI	ACGT	3 cut(s)	137, 339, 353
TaqI	TCGA	3 cut(s)	84, 1406, 2094
TaqII	GACCGA	1 cut(s)	329
TatI	WGTACW	3 cut(s)	474, 2022, 2110
TauI	GCSGC	2 cut(s)	410, 413
Tru1I	TTAA	9 cut(s)	627, 669, 786, 807, 852, 1016, 1446, 1832, 2373
Tru9I	TTAA	9 cut(s)	627, 669, 786, 807, 852, 1016, 1446, 1832, 2373
TscAI	CASTG	3 cut(s)	994, 1069, 2012
TseFI	GTSAC	5 cut(s)	13, 941, 983, 1504, 2012
TseI	GCWGC	9 cut(s)	247, 250, 266, 684, 698, 1123, 1235, 1487, 2322
Tsp45I	GTSAC	5 cut(s)	13, 941, 983, 1504, 2012
TspDTI	ATGAA	5 cut(s)	908, 1287, 1372, 1443, 1585
TspGWI	ACGGA	1 cut(s)	773
TspMI	CCCGGG	1 cut(s)	1576
TspRI	CASTG	3 cut(s)	994, 1069, 2012
Van91I	CCANNNNNTGG	1 cut(s)	1707
Vha464I	CTTAAG	1 cut(s)	668
VpaK11BI	GGWCC	3 cut(s)	341, 1625, 2077
VspI	ATTAAT	1 cut(s)	852
XagI	CCTNNNNNAGG	2 cut(s)	282, 844
XapI	RAATTY	3 cut(s)	640, 1943, 2252
XbaI	TCTAGA	1 cut(s)	949
XceI	RCATGY	1 cut(s)	2192
XcmI	CCANNNNNNNNNTGG	1 cut(s)	977
XmaI	CCCGGG	1 cut(s)	1576
XmaJI	CCTAGG	1 cut(s)	481
XmiI	GTMKAC	2 cut(s)	1047, 1980
XspI	CTAG	7 cut(s)	201, 279, 284, 482, 660, 950, 1148

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.