Tubby-like F-box protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G53320 |
| fragaria_vesca | FvH4_3g18240 FvH4_3g18250 |
| malus_domestica | MD03G1243700.v1.1 MD11G1264100.v1.1 |
| prunus_persica | Prupe.4G164400_v2.0.a1 |
| pyrus_communis | pycom03g19050 pycom11g23260 |
| rosa_chinensis | RchiOBHm_Chr5g0030861 RchiOBHm_Chr5g0030871 |
| rosa_laevigata | RLG00000033258 RLG00000033259 |
| rosa_multiflora | Rmu_sc0001974.1_g000029 |
| rosa_roxburghii | Rroxscaffold_1G00049390 Rroxscaffold_1G00049400 |
| rosa_rugosa | Rorug05G0121000 Rorug05G0121000 |
| rosa_samantha | Rh5AG214000 Rh5AG214100 Rh5BG213200 Rh5BG213300 Rh5CG237000 Rh5CG237100 Rh5DG217600 Rh5DG217700 |
| rosa_wichuraiana | Rw5G019560 Rw5G019570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 98 |
| Acc36I | ACCTGC | 2 cut(s) | 645, 715 |
| AccB1I | GGYRCC | 1 cut(s) | 593 |
| AccI | GTMKAC | 2 cut(s) | 173, 659 |
| AccII | CGCG | 7 cut(s) | 82, 104, 106, 108, 137, 308, 310 |
| AciI | CCGC | 9 cut(s) | 94, 108, 137, 244, 280, 623, 626, 664, 782 |
| AcoI | YGGCCR | 1 cut(s) | 117 |
| AcsI | RAATTY | 3 cut(s) | 32, 59, 931 |
| AcuI | CTGAAG | 1 cut(s) | 1019 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 136, 632, 800, 882, 943, 1006 |
| AgsI | TTSAA | 5 cut(s) | 58, 716, 742, 931, 974 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 154 |
| AjnI | CCWGG | 2 cut(s) | 361, 1098 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 798, 830 |
| AluBI | AGCT | 4 cut(s) | 190, 579, 893, 1125 |
| AluI | AGCT | 4 cut(s) | 190, 579, 893, 1125 |
| Alw21I | GWGCWC | 1 cut(s) | 192 |
| Alw26I | GTCTC | 4 cut(s) | 9, 60, 84, 733 |
| AoxI | GGCC | 2 cut(s) | 117, 236 |
| ApeKI | GCWGC | 4 cut(s) | 181, 479, 651, 1081 |
| ApoI | RAATTY | 3 cut(s) | 32, 59, 931 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1029 |
| AspLEI | GCGC | 6 cut(s) | 82, 106, 108, 266, 310, 312 |
| AspS9I | GGNCC | 4 cut(s) | 127, 365, 761, 991 |
| AsuHPI | GGTGA | 2 cut(s) | 815, 1064 |
| AsuNHI | GCTAGC | 1 cut(s) | 647 |
| AvaII | GGWCC | 4 cut(s) | 127, 365, 761, 991 |
| BaeGI | GKGCMC | 1 cut(s) | 596 |
| BanI | GGYRCC | 1 cut(s) | 593 |
| BanII | GRGCYC | 1 cut(s) | 192 |
| BauI | CACGAG | 1 cut(s) | 166 |
| BbsI | GAAGAC | 1 cut(s) | 416 |
| Bbv12I | GWGCWC | 1 cut(s) | 192 |
| BbvI | GCAGC | 4 cut(s) | 168, 491, 663, 1093 |
| BccI | CCATC | 7 cut(s) | 390, 454, 766, 805, 884, 894, 1063 |
| BceAI | ACGGC | 1 cut(s) | 651 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 163, 197 |
| BciT130I | CCWGG | 2 cut(s) | 363, 1100 |
| BclI | TGATCA | 2 cut(s) | 73, 907 |
| BcoDI | GTCTC | 4 cut(s) | 9, 60, 84, 733 |
| BfaI | CTAG | 1 cut(s) | 648 |
| BfmI | CTRYAG | 1 cut(s) | 322 |
| BfuAI | ACCTGC | 2 cut(s) | 645, 715 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1100 |
| BisI | GCNGC | 7 cut(s) | 109, 182, 480, 623, 626, 652, 1082 |
| BlsI | GCNGC | 7 cut(s) | 110, 183, 481, 624, 627, 653, 1083 |
| Bme1390I | CCNGG | 2 cut(s) | 363, 1100 |
| Bme18I | GGWCC | 4 cut(s) | 127, 365, 761, 991 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 154 |
| BmgT120I | GGNCC | 4 cut(s) | 127, 365, 761, 991 |
| BmiI | GGNNCC | 2 cut(s) | 595, 993 |
| BmrFI | CCNGG | 2 cut(s) | 363, 1100 |
| BmsI | GCATC | 2 cut(s) | 520, 965 |
| BmtI | GCTAGC | 1 cut(s) | 651 |
| BpiI | GAAGAC | 1 cut(s) | 416 |
| BpuEI | CTTGAG | 1 cut(s) | 901 |
| BsaI | GGTCTC | 2 cut(s) | 84, 733 |
| BsaJI | CCNNGG | 4 cut(s) | 193, 547, 764, 937 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 136, 632, 800, 882, 943, 1006 |
| Bse1I | ACTGG | 5 cut(s) | 637, 861, 981, 1000, 1143 |
| Bse3DI | GCAATG | 1 cut(s) | 562 |
| BseBI | CCWGG | 2 cut(s) | 363, 1100 |
| BseDI | CCNNGG | 4 cut(s) | 193, 547, 764, 937 |
| BseGI | GGATG | 1 cut(s) | 777 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 136, 632, 800, 882, 943, 1006 |
| BseMI | GCAATG | 1 cut(s) | 562 |
| BseMII | CTCAG | 1 cut(s) | 501 |
| BseNI | ACTGG | 5 cut(s) | 637, 861, 981, 1000, 1143 |
| BsePI | GCGCGC | 2 cut(s) | 104, 308 |
| BseRI | GAGGAG | 1 cut(s) | 182 |
| BseSI | GKGCMC | 1 cut(s) | 596 |
| BseX3I | CGGCCG | 1 cut(s) | 117 |
| BseXI | GCAGC | 4 cut(s) | 168, 491, 663, 1093 |
| Bsh1236I | CGCG | 7 cut(s) | 82, 104, 106, 108, 137, 308, 310 |
| Bsh1285I | CGRYCG | 1 cut(s) | 120 |
| BshFI | GGCC | 2 cut(s) | 119, 238 |
| BshNI | GGYRCC | 1 cut(s) | 593 |
| BsiEI | CGRYCG | 1 cut(s) | 120 |
| BsiHKAI | GWGCWC | 1 cut(s) | 192 |
| BsiSI | CCGG | 1 cut(s) | 185 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 136, 632, 800, 882, 943, 1006 |
| BsmAI | GTCTC | 4 cut(s) | 9, 60, 84, 733 |
| BsmBI | CGTCTC | 1 cut(s) | 60 |
| BsnI | GGCC | 2 cut(s) | 119, 238 |
| Bso31I | GGTCTC | 2 cut(s) | 84, 733 |
| Bsp1286I | GDGCHC | 2 cut(s) | 192, 596 |
| Bsp143I | GATC | 4 cut(s) | 73, 201, 303, 907 |
| Bsp19I | CCATGG | 1 cut(s) | 937 |
| BspACI | CCGC | 9 cut(s) | 94, 108, 137, 244, 280, 623, 626, 664, 782 |
| BspANI | GGCC | 2 cut(s) | 119, 238 |
| BspCNI | CTCAG | 1 cut(s) | 502 |
| BspFNI | CGCG | 7 cut(s) | 82, 104, 106, 108, 137, 308, 310 |
| BspLI | GGNNCC | 2 cut(s) | 595, 993 |
| BspMI | ACCTGC | 2 cut(s) | 645, 715 |
| BspOI | GCTAGC | 1 cut(s) | 651 |
| BspT107I | GGYRCC | 1 cut(s) | 593 |
| BspTNI | GGTCTC | 2 cut(s) | 84, 733 |
| BsrDI | GCAATG | 1 cut(s) | 562 |
| BsrI | ACTGG | 5 cut(s) | 637, 861, 981, 1000, 1143 |
| BssECI | CCNNGG | 4 cut(s) | 193, 547, 764, 937 |
| BssHII | GCGCGC | 2 cut(s) | 104, 308 |
| BssMI | GATC | 4 cut(s) | 73, 201, 303, 907 |
| BssSI | CACGAG | 1 cut(s) | 166 |
| BssT1I | CCWWGG | 3 cut(s) | 547, 764, 937 |
| Bst2BI | CACGAG | 1 cut(s) | 166 |
| Bst2UI | CCWGG | 2 cut(s) | 363, 1100 |
| Bst4CI | ACNGT | 4 cut(s) | 326, 952, 988, 1030 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 644 |
| BstDEI | CTNAG | 3 cut(s) | 8, 510, 575 |
| BstDSI | CCRYGG | 1 cut(s) | 937 |
| BstF5I | GGATG | 1 cut(s) | 777 |
| BstFNI | CGCG | 7 cut(s) | 82, 104, 106, 108, 137, 308, 310 |
| BstHHI | GCGC | 6 cut(s) | 82, 106, 108, 266, 310, 312 |
| BstKTI | GATC | 4 cut(s) | 76, 204, 306, 910 |
| BstMAI | GTCTC | 4 cut(s) | 9, 60, 84, 733 |
| BstMBI | GATC | 4 cut(s) | 73, 201, 303, 907 |
| BstMCI | CGRYCG | 1 cut(s) | 120 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 143, 187, 307, 644, 1100, 1122 |
| BstNI | CCWGG | 2 cut(s) | 363, 1100 |
| BstSCI | CCNGG | 2 cut(s) | 361, 1098 |
| BstSFI | CTRYAG | 1 cut(s) | 322 |
| BstSLI | GKGCMC | 1 cut(s) | 596 |
| BstUI | CGCG | 7 cut(s) | 82, 104, 106, 108, 137, 308, 310 |
| BstV1I | GCAGC | 4 cut(s) | 168, 491, 663, 1093 |
| BstV2I | GAAGAC | 1 cut(s) | 416 |
| BstZI | CGGCCG | 1 cut(s) | 117 |
| BsuRI | GGCC | 2 cut(s) | 119, 238 |
| BtgI | CCRYGG | 1 cut(s) | 937 |
| BtsCI | GGATG | 1 cut(s) | 777 |
| BtsI | GCAGTG | 1 cut(s) | 923 |
| BtsIMutI | CAGTG | 5 cut(s) | 331, 507, 923, 966, 993 |
| BveI | ACCTGC | 2 cut(s) | 645, 715 |
| CfoI | GCGC | 6 cut(s) | 82, 106, 108, 266, 310, 312 |
| Cfr13I | GGNCC | 4 cut(s) | 127, 365, 761, 991 |
| CviAII | CATG | 3 cut(s) | 369, 905, 938 |
| DdeI | CTNAG | 3 cut(s) | 8, 510, 575 |
| DpnI | GATC | 4 cut(s) | 75, 203, 305, 909 |
| DpnII | GATC | 4 cut(s) | 73, 201, 303, 907 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 98 |
| DriI | GACNNNNNGTC | 1 cut(s) | 154 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 98 |
| EaeI | YGGCCR | 1 cut(s) | 117 |
| EagI | CGGCCG | 1 cut(s) | 117 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 154 |
| Ecl136II | GAGCTC | 1 cut(s) | 190 |
| EclXI | CGGCCG | 1 cut(s) | 117 |
| Eco130I | CCWWGG | 3 cut(s) | 547, 764, 937 |
| Eco24I | GRGCYC | 1 cut(s) | 192 |
| Eco31I | GGTCTC | 2 cut(s) | 84, 733 |
| Eco47I | GGWCC | 4 cut(s) | 127, 365, 761, 991 |
| Eco52I | CGGCCG | 1 cut(s) | 117 |
| Eco53kI | GAGCTC | 1 cut(s) | 190 |
| Eco57I | CTGAAG | 1 cut(s) | 1019 |
| EcoICRI | GAGCTC | 1 cut(s) | 190 |
| EcoRII | CCWGG | 2 cut(s) | 361, 1098 |
| EcoT14I | CCWWGG | 3 cut(s) | 547, 764, 937 |
| EcoT38I | GRGCYC | 1 cut(s) | 192 |
| ErhI | CCWWGG | 3 cut(s) | 547, 764, 937 |
| Esp3I | CGTCTC | 1 cut(s) | 60 |
| FaeI | CATG | 3 cut(s) | 372, 908, 941 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 544, 576 |
| FatI | CATG | 3 cut(s) | 368, 904, 937 |
| FauI | CCCGC | 2 cut(s) | 671, 789 |
| FbaI | TGATCA | 2 cut(s) | 73, 907 |
| FblI | GTMKAC | 2 cut(s) | 173, 659 |
| Fnu4HI | GCNGC | 7 cut(s) | 109, 182, 480, 623, 626, 652, 1082 |
| FokI | GGATG | 1 cut(s) | 784 |
| FriOI | GRGCYC | 1 cut(s) | 192 |
| Fsp4HI | GCNGC | 7 cut(s) | 109, 182, 480, 623, 626, 652, 1082 |
| FspBI | CTAG | 1 cut(s) | 648 |
| GlaI | GCGC | 6 cut(s) | 81, 105, 107, 265, 309, 311 |
| GluI | GCNGC | 7 cut(s) | 109, 182, 480, 623, 626, 652, 1082 |
| HaeIII | GGCC | 2 cut(s) | 119, 238 |
| HapII | CCGG | 1 cut(s) | 185 |
| HhaI | GCGC | 6 cut(s) | 82, 106, 108, 266, 310, 312 |
| Hin1II | CATG | 3 cut(s) | 372, 908, 941 |
| Hin6I | GCGC | 6 cut(s) | 80, 104, 106, 264, 308, 310 |
| HinP1I | GCGC | 6 cut(s) | 80, 104, 106, 264, 308, 310 |
| HincII | GTYRAC | 1 cut(s) | 174 |
| HindII | GTYRAC | 1 cut(s) | 174 |
| HinfI | GANTC | 5 cut(s) | 99, 113, 132, 149, 854 |
| HpaII | CCGG | 1 cut(s) | 185 |
| HphI | GGTGA | 2 cut(s) | 815, 1064 |
| Hpy166II | GTNNAC | 5 cut(s) | 174, 660, 821, 991, 1065 |
| Hpy188I | TCNGA | 3 cut(s) | 9, 30, 583 |
| Hpy188III | TCNNGA | 4 cut(s) | 65, 756, 880, 1066 |
| Hpy8I | GTNNAC | 5 cut(s) | 174, 660, 821, 991, 1065 |
| Hpy99I | CGWCG | 3 cut(s) | 157, 257, 260 |
| HpyAV | CCTTC | 4 cut(s) | 327, 354, 755, 1105 |
| HpyCH4III | ACNGT | 4 cut(s) | 326, 952, 988, 1030 |
| HpyCH4IV | ACGT | 3 cut(s) | 252, 338, 1061 |
| HpyCH4V | TGCA | 5 cut(s) | 276, 437, 638, 812, 916 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 143, 187, 307, 644, 1100, 1122 |
| HpyF3I | CTNAG | 3 cut(s) | 8, 510, 575 |
| HpySE526I | ACGT | 3 cut(s) | 252, 338, 1061 |
| Hsp92II | CATG | 3 cut(s) | 372, 908, 941 |
| HspAI | GCGC | 6 cut(s) | 80, 104, 106, 264, 308, 310 |
| Ksp22I | TGATCA | 2 cut(s) | 73, 907 |
| Kzo9I | GATC | 4 cut(s) | 73, 201, 303, 907 |
| LmnI | GCTCC | 3 cut(s) | 187, 195, 898 |
| Lsp1109I | GCAGC | 4 cut(s) | 168, 491, 663, 1093 |
| LweI | GCATC | 2 cut(s) | 520, 965 |
| MaeI | CTAG | 1 cut(s) | 648 |
| MaeII | ACGT | 3 cut(s) | 252, 338, 1061 |
| MaeIII | GTNAC | 1 cut(s) | 946 |
| MalI | GATC | 4 cut(s) | 75, 203, 305, 909 |
| MauBI | CGCGCGCG | 1 cut(s) | 104 |
| MboI | GATC | 4 cut(s) | 73, 201, 303, 907 |
| MboII | GAAGA | 5 cut(s) | 421, 498, 856, 976, 1025 |
| MfeI | CAATTG | 1 cut(s) | 813 |
| MhlI | GDGCHC | 2 cut(s) | 192, 596 |
| MluCI | AATT | 8 cut(s) | 32, 53, 59, 333, 598, 787, 813, 931 |
| MlyI | GAGTC | 4 cut(s) | 107, 108, 141, 143 |
| MmeI | TCCRAC | 1 cut(s) | 105 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1029 |
| MseI | TTAA | 2 cut(s) | 354, 786 |
| MslI | CAYNNNNRTG | 1 cut(s) | 633 |
| MspI | CCGG | 1 cut(s) | 185 |
| MspR9I | CCNGG | 2 cut(s) | 363, 1100 |
| MunI | CAATTG | 1 cut(s) | 813 |
| MvaI | CCWGG | 2 cut(s) | 363, 1100 |
| MvnI | CGCG | 7 cut(s) | 82, 104, 106, 108, 137, 308, 310 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 143, 187, 307, 644, 1100, 1122 |
| NcoI | CCATGG | 1 cut(s) | 937 |
| NdeII | GATC | 4 cut(s) | 73, 201, 303, 907 |
| NheI | GCTAGC | 1 cut(s) | 647 |
| NlaIII | CATG | 3 cut(s) | 372, 908, 941 |
| NlaIV | GGNNCC | 2 cut(s) | 595, 993 |
| NmeAIII | GCCGAG | 4 cut(s) | 95, 122, 145, 174 |
| NmuCI | GTSAC | 1 cut(s) | 946 |
| PauI | GCGCGC | 2 cut(s) | 104, 308 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 108, 158 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1029 |
| PfeI | GAWTC | 1 cut(s) | 854 |
| PflFI | GACNNNGTC | 1 cut(s) | 131 |
| PkrI | GCNGC | 7 cut(s) | 110, 183, 481, 624, 627, 653, 1083 |
| PleI | GAGTC | 4 cut(s) | 107, 107, 140, 143 |
| PpsI | GAGTC | 4 cut(s) | 107, 107, 140, 143 |
| Psp124BI | GAGCTC | 1 cut(s) | 192 |
| Psp6I | CCWGG | 2 cut(s) | 361, 1098 |
| PspGI | CCWGG | 2 cut(s) | 361, 1098 |
| PspN4I | GGNNCC | 2 cut(s) | 595, 993 |
| PspPI | GGNCC | 4 cut(s) | 127, 365, 761, 991 |
| PsyI | GACNNNGTC | 1 cut(s) | 131 |
| PteI | GCGCGC | 2 cut(s) | 104, 308 |
| RseI | CAYNNNNRTG | 1 cut(s) | 633 |
| SacI | GAGCTC | 1 cut(s) | 192 |
| SalI | GTCGAC | 1 cut(s) | 172 |
| SaqAI | TTAA | 2 cut(s) | 354, 786 |
| SatI | GCNGC | 7 cut(s) | 109, 182, 480, 623, 626, 652, 1082 |
| Sau3AI | GATC | 4 cut(s) | 73, 201, 303, 907 |
| Sau96I | GGNCC | 4 cut(s) | 127, 365, 761, 991 |
| SchI | GAGTC | 4 cut(s) | 107, 108, 141, 143 |
| ScrFI | CCNGG | 2 cut(s) | 363, 1100 |
| SduI | GDGCHC | 2 cut(s) | 192, 596 |
| SfaNI | GCATC | 2 cut(s) | 520, 965 |
| SfcI | CTRYAG | 1 cut(s) | 322 |
| SinI | GGWCC | 4 cut(s) | 127, 365, 761, 991 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 633 |
| SmlI | CTYRAG | 1 cut(s) | 880 |
| SmoI | CTYRAG | 1 cut(s) | 880 |
| Sse9I | AATT | 8 cut(s) | 32, 53, 59, 333, 598, 787, 813, 931 |
| SsiI | CCGC | 9 cut(s) | 94, 108, 137, 244, 280, 623, 626, 664, 782 |
| SspMI | CTAG | 1 cut(s) | 648 |
| SstI | GAGCTC | 1 cut(s) | 192 |
| StyD4I | CCNGG | 2 cut(s) | 361, 1098 |
| StyI | CCWWGG | 3 cut(s) | 547, 764, 937 |
| TaaI | ACNGT | 4 cut(s) | 326, 952, 988, 1030 |
| TaiI | ACGT | 3 cut(s) | 255, 341, 1064 |
| TaqI | TCGA | 2 cut(s) | 64, 173 |
| TaqII | GACCGA | 1 cut(s) | 144 |
| TasI | AATT | 8 cut(s) | 32, 53, 59, 333, 598, 787, 813, 931 |
| TauI | GCSGC | 3 cut(s) | 111, 625, 628 |
| TfiI | GAWTC | 1 cut(s) | 854 |
| Tru1I | TTAA | 2 cut(s) | 354, 786 |
| Tru9I | TTAA | 2 cut(s) | 354, 786 |
| TscAI | CASTG | 5 cut(s) | 331, 514, 923, 966, 993 |
| TseFI | GTSAC | 1 cut(s) | 946 |
| TseI | GCWGC | 4 cut(s) | 181, 479, 651, 1081 |
| Tsp45I | GTSAC | 1 cut(s) | 946 |
| TspDTI | ATGAA | 1 cut(s) | 857 |
| TspRI | CASTG | 5 cut(s) | 331, 514, 923, 966, 993 |
| Tth111I | GACNNNGTC | 1 cut(s) | 131 |
| VpaK11BI | GGWCC | 4 cut(s) | 127, 365, 761, 991 |
| XapI | RAATTY | 3 cut(s) | 32, 59, 931 |
| XmiI | GTMKAC | 2 cut(s) | 173, 659 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1029 |
| XspI | CTAG | 1 cut(s) | 648 |