Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0006125

Physical Location & Seq

Genomic Coordinates Reverse (-)

24674132 .. 24676476

Gene Structure 2345 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG213200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1677 bp

ATGGACCACATCCAGATCGACGCCGATGAGGTCCCGATGACTCTCCAGAACACCGATACTCAAGATTCCTGTTCCGATTGCGATACCGTCCGCTCCGAATCGAATTCCTCTTCTTCTGAAGAAATCGAAATCGATCAGGATTCCCAGTCCGATTGCGAATCGGAGTCGCCGGTTTCCGATCCGATTGGGGCTTTCACTGAAAACGAAATCACGGTTAGAGTGGACGGCCTGGAGCGTGAGACTATTACGAAGAGCTTCGTCTCCGGTATGGGACCCGCCGGCGGAGAAACCAGAGTGGTGGCTGTGCATAAGAATTCGAGCTCTGGTCTGACACGGCGGGCGAGGTTCGATTCGTTTCGGGTTTTCACGGAGGCGGCGGCCCGGAAATGCGGCGGGAATCCGAATATTAAGTATGGTTGGTATGGCGGATCGAAGGATGAGATTGCTGAGATTTTGGTTCATGGATTTAGTGCTAAGAATGAAAAGGTTGGTGGTGGAATACAATTGGTTCCGGTGAAATTCGCTTTGGATGCTGCGGTGGGTTCTGGTGTTGATGAAGATGGGATGAGGCATGTGCTGATGTGCCGGGTTATACTGGGGAAGAGTGAGTTGATGCCTAATGGTTCGGATCAAATTCGGCCCCGTTCGATTGAGTTTGATTCTGGTGTGGATAGTCTGGTGACCCCTAGGAAGTATGTTGTGTGGAGCAATTTGATGAACTCGCATATCTGTCCTGCTTATGTTGTCAGCTTCAAGGCTCCTGGTTGCTTAGAGAAGTATGCAGCTCCTCCTCAGAAGTCTATTAGCTTCCTTGATCTGTTGCCTGTGCTCGCTAGGTTCTTGCCTCCTTCGAAAATGGCTGTGCTGTGCCAATTGCGTGATGATTACTGGGACAAGAAGATTAGTTTAGCTGAGCTGCATCGGAAGTTGAAGCAAGAAGTTGATGGGAAGGTTCTGGCTTCTGCGATGAGATTGGTGACACCTAGACAGGCGAGTGCTGGTGCTTTTCCTGCTCCTGGAACTGTTAATTTGCCACATTTGATGAAAGTGCTGCCGTTGTTGTTACCTGCTTCGGAAATGGCTGTAGTTGCCAAATCGCGCGACGATTACTTGGCAAAGAAGATTAGCCTGGCTGAGGTGAGTCGACAATTGAGACTCGTGGTTGATAAAAAGGTTATGGCTTCAGCCATGAAATTGATGAAACCTGCTCAGAGAAGTTCTGGTTTACACCGCGGATCTCTTGTGATGGCTGCGCTGGCAAGGTTCTTGCCTCCTTCACAGATGAAAATACTTGGCAGATTGGTCATGGATTTCAAGGCAAAGAAGATTAGTGGAGATGAGTTGGATCGAAAATTTAAGCTCATAGTTGATGACAAGGTGTTGGCTTCAGCTATCAAATTGGTGACACCAAGTACTCAGCAGAGGAGTAACACTGCTAGTGATATTAGAGATCTTTTGAAGGTGCCAAATTCTTCAATATATTTCCCTGCTCTGATGCCCGTGTTCGAAAGGTCCCTATCTCCTCAAAAGATGGCCTTGCTTACCAAAAGCCTCAATGATTTGAAGGCCAAGAAGATAACCAGACCTCAGCTGCTTCAAAGAGTGAAACTCATAGTTGGTAATGAGTTGTTGGTTGCAGCAGTCAAATCTTACAGAAGCAGCCAGCAACAGGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PARP RST

Protein Analysis

558

Amino Acids

61.17

Weight (kDa)

9.2

Isoelectric Point (pI)

47.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RST	PF12174	263 - 323	2e-07	RCD1-SRO-TAF4 (RST) plant domain
RST	PF12174	414 - 467	9.8e-09	RCD1-SRO-TAF4 (RST) plant domain
RST	PF12174	491 - 552	1.5e-15	RCD1-SRO-TAF4 (RST) plant domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006125)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53320
fragaria_vesca	FvH4_3g18240 FvH4_3g18250
malus_domestica	MD03G1243700.v1.1 MD11G1264100.v1.1
prunus_persica	Prupe.4G164400_v2.0.a1
pyrus_communis	pycom03g19050 pycom11g23260
rosa_chinensis	RchiOBHm_Chr5g0030861 RchiOBHm_Chr5g0030871
rosa_laevigata	RLG00000033258 RLG00000033259
rosa_multiflora	Rmu_sc0001974.1_g000029
rosa_roxburghii	Rroxscaffold_1G00049390 Rroxscaffold_1G00049400
rosa_rugosa	Rorug05G0121000 Rorug05G0121000
rosa_samantha	Rh5AG214000 Rh5AG214100 Rh5BG213200 Rh5BG213300 Rh5CG237000 Rh5CG237100 Rh5DG217600 Rh5DG217700
rosa_wichuraiana	Rw5G019560 Rw5G019570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1075, 1213
AccB1I	GGYRCC	1 cut(s)	1462
AccBSI	CCGCTC	1 cut(s)	93
AccI	GTMKAC	1 cut(s)	1144
AccII	CGCG	3 cut(s)	1099, 1101, 1233
AclWI	GGATC	5 cut(s)	173, 436, 636, 1243, 1353
AcsI	RAATTY	6 cut(s)	103, 313, 518, 633, 1352, 1468
AcuI	CTGAAG	3 cut(s)	138, 1167, 1371
AcyI	GRCGYC	1 cut(s)	21
AfaI	GTAC	1 cut(s)	1414
AfiI	CCNNNNNNNGG	4 cut(s)	281, 1016, 1135, 1669
AgsI	TTSAA	7 cut(s)	754, 931, 1315, 1459, 1476, 1564, 1598
AjnI	CCWGG	4 cut(s)	228, 760, 1015, 1128
AjuI	GAANNNNNNNTTGG	2 cut(s)	509, 541
Alw21I	GWGCWC	2 cut(s)	323, 831
Alw26I	GTCTC	3 cut(s)	233, 265, 1147
AlwI	GGATC	5 cut(s)	173, 436, 636, 1243, 1353
AoxI	GGCC	5 cut(s)	226, 378, 638, 1533, 1566
ApeKI	GCWGC	8 cut(s)	533, 782, 916, 1051, 1250, 1591, 1637, 1659
ApoI	RAATTY	6 cut(s)	103, 313, 518, 633, 1352, 1468
Asp700I	GAANNNNTTC	1 cut(s)	254
AspA2I	CCTAGG	1 cut(s)	686
AspLEI	GCGC	2 cut(s)	1101, 1255
AspS9I	GGNCC	6 cut(s)	4, 31, 272, 379, 639, 1512
AsuC2I	CCSGG	2 cut(s)	382, 587
AsuHPI	GGTGA	5 cut(s)	526, 691, 988, 1150, 1414
AsuII	TTCGAA	2 cut(s)	851, 1506
AvaII	GGWCC	4 cut(s)	4, 31, 272, 1512
AvrII	CCTAGG	1 cut(s)	686
BanI	GGYRCC	1 cut(s)	1462
BanII	GRGCYC	1 cut(s)	323
BauI	CACGAG	1 cut(s)	1157
Bbv12I	GWGCWC	2 cut(s)	323, 831
BbvCI	CCTCAGC	2 cut(s)	1134, 1587
BbvI	GCAGC	8 cut(s)	520, 794, 903, 1038, 1237, 1578, 1649, 1671
BccI	CCATC	4 cut(s)	554, 938, 1240, 1525
BceAI	ACGGC	3 cut(s)	241, 350, 1039
BciT130I	CCWGG	4 cut(s)	230, 762, 1017, 1130
BcnI	CCSGG	2 cut(s)	382, 587
BcoDI	GTCTC	3 cut(s)	233, 265, 1147
BfaI	CTAG	4 cut(s)	687, 834, 984, 1437
BfmI	CTRYAG	1 cut(s)	1083
BfuAI	ACCTGC	2 cut(s)	1075, 1213
BglII	AGATCT	1 cut(s)	1450
BlnI	CCTAGG	1 cut(s)	686
BlpI	GCTNAGC	1 cut(s)	912
BmcAI	AGTACT	1 cut(s)	1414
Bme1390I	CCNGG	6 cut(s)	230, 382, 587, 762, 1017, 1130
Bme18I	GGWCC	4 cut(s)	4, 31, 272, 1512
BmgT120I	GGNCC	6 cut(s)	4, 31, 272, 379, 639, 1512
BmiI	GGNNCC	8 cut(s)	33, 273, 274, 510, 641, 759, 1464, 1514
BmrFI	CCNGG	6 cut(s)	230, 382, 587, 762, 1017, 1130
BmrI	ACTGGG	3 cut(s)	139, 605, 898
BmsI	GCATC	4 cut(s)	520, 603, 928, 1485
BmuI	ACTGGG	3 cut(s)	139, 605, 898
BplI	GAGNNNNNCTC	2 cut(s)	1593, 1625
BpmI	CTGGAG	2 cut(s)	29, 251
Bpu10I	CCTNAGC	2 cut(s)	1134, 1587
Bpu1102I	GCTNAGC	1 cut(s)	912
Bpu14I	TTCGAA	2 cut(s)	851, 1506
BpuEI	CTTGAG	1 cut(s)	45
BpuMI	CCSGG	2 cut(s)	382, 587
Bsa29I	ATCGAT	1 cut(s)	132
BsaHI	GRCGYC	1 cut(s)	21
BsaJI	CCNNGG	2 cut(s)	686, 1231
BsaWI	WCCGGW	2 cut(s)	263, 511
Bsc4I	CCNNNNNNNGG	4 cut(s)	281, 1016, 1135, 1669
Bse118I	RCCGGY	2 cut(s)	169, 278
Bse1I	ACTGG	3 cut(s)	145, 600, 893
BseBI	CCWGG	4 cut(s)	230, 762, 1017, 1130
BseCI	ATCGAT	1 cut(s)	132
BseDI	CCNNGG	2 cut(s)	686, 1231
BseGI	GGATG	4 cut(s)	9, 442, 535, 570
BseLI	CCNNNNNNNGG	4 cut(s)	281, 1016, 1135, 1669
BseMII	CTCAG	7 cut(s)	438, 806, 903, 1125, 1223, 1430, 1601
BseNI	ACTGG	3 cut(s)	145, 600, 893
BseRI	GAGGAG	4 cut(s)	777, 780, 1438, 1512
BseXI	GCAGC	8 cut(s)	520, 794, 903, 1038, 1237, 1578, 1649, 1671
Bsh1236I	CGCG	3 cut(s)	1099, 1101, 1233
BshFI	GGCC	5 cut(s)	228, 380, 640, 1535, 1568
BshNI	GGYRCC	1 cut(s)	1462
BshVI	ATCGAT	1 cut(s)	132
BsiHKAI	GWGCWC	2 cut(s)	323, 831
BsiSI	CCGG	6 cut(s)	170, 264, 279, 382, 512, 586
BslFI	GGGAC	4 cut(s)	17, 285, 905, 1498
BslI	CCNNNNNNNGG	4 cut(s)	281, 1016, 1135, 1669
BsmAI	GTCTC	3 cut(s)	233, 265, 1147
BsmBI	CGTCTC	1 cut(s)	265
BsmFI	GGGAC	4 cut(s)	17, 285, 905, 1498
BsnI	GGCC	5 cut(s)	228, 380, 640, 1535, 1568
Bsp119I	TTCGAA	2 cut(s)	851, 1506
Bsp1286I	GDGCHC	2 cut(s)	323, 831
Bsp143I	GATC	9 cut(s)	15, 133, 178, 428, 628, 814, 1235, 1345, 1450
Bsp1720I	GCTNAGC	1 cut(s)	912
BspANI	GGCC	5 cut(s)	228, 380, 640, 1535, 1568
BspCNI	CTCAG	7 cut(s)	439, 805, 904, 1126, 1222, 1429, 1600
BspDI	ATCGAT	1 cut(s)	132
BspFNI	CGCG	3 cut(s)	1099, 1101, 1233
BspLI	GGNNCC	8 cut(s)	33, 273, 274, 510, 641, 759, 1464, 1514
BspMI	ACCTGC	2 cut(s)	1075, 1213
BspPI	GGATC	5 cut(s)	173, 436, 636, 1243, 1353
BspQI	GCTCTTC	1 cut(s)	245
BspT104I	TTCGAA	2 cut(s)	851, 1506
BspT107I	GGYRCC	1 cut(s)	1462
BsrBI	CCGCTC	1 cut(s)	93
BsrFI	RCCGGY	2 cut(s)	169, 278
BsrI	ACTGG	3 cut(s)	145, 600, 893
BssAI	RCCGGY	2 cut(s)	169, 278
BssECI	CCNNGG	2 cut(s)	686, 1231
BssMI	GATC	9 cut(s)	15, 133, 178, 428, 628, 814, 1235, 1345, 1450
BssNI	GRCGYC	1 cut(s)	21
BssSI	CACGAG	1 cut(s)	1157
BssT1I	CCWWGG	1 cut(s)	686
Bst2BI	CACGAG	1 cut(s)	1157
Bst2UI	CCWGG	4 cut(s)	230, 762, 1017, 1130
Bst4CI	ACNGT	3 cut(s)	88, 214, 1024
Bst6I	CTCTTC	3 cut(s)	115, 245, 596
BstACI	GRCGYC	1 cut(s)	21
BstBI	TTCGAA	2 cut(s)	851, 1506
BstC8I	GCNNGC	5 cut(s)	280, 339, 831, 1257, 1664
BstDEI	CTNAG	9 cut(s)	447, 474, 769, 792, 912, 1134, 1209, 1416, 1587
BstDSI	CCRYGG	1 cut(s)	1231
BstEII	GGTNACC	1 cut(s)	679
BstENI	CCTNNNNNAGG	1 cut(s)	1133
BstF5I	GGATG	4 cut(s)	9, 442, 535, 570
BstFNI	CGCG	3 cut(s)	1099, 1101, 1233
BstHHI	GCGC	2 cut(s)	1101, 1255
BstKTI	GATC	9 cut(s)	18, 136, 181, 431, 631, 817, 1238, 1348, 1453
BstMAI	GTCTC	3 cut(s)	233, 265, 1147
BstMBI	GATC	9 cut(s)	15, 133, 178, 428, 628, 814, 1235, 1345, 1450
BstMWI	GCNNNNNNNGC	4 cut(s)	530, 1010, 1088, 1256
BstNI	CCWGG	4 cut(s)	230, 762, 1017, 1130
BstNSI	RCATGY	1 cut(s)	575
BstPI	GGTNACC	1 cut(s)	679
BstSCI	CCNGG	6 cut(s)	228, 380, 585, 760, 1015, 1128
BstSFI	CTRYAG	1 cut(s)	1083
BstUI	CGCG	3 cut(s)	1099, 1101, 1233
BstV1I	GCAGC	8 cut(s)	520, 794, 903, 1038, 1237, 1578, 1649, 1671
BstX2I	RGATCY	2 cut(s)	1235, 1450
BstXI	CCANNNNNNTGG	1 cut(s)	298
BstYI	RGATCY	2 cut(s)	1235, 1450
Bsu15I	ATCGAT	1 cut(s)	132
BsuRI	GGCC	5 cut(s)	228, 380, 640, 1535, 1568
BsuTUI	ATCGAT	1 cut(s)	132
BtgI	CCRYGG	1 cut(s)	1231
BtgZI	GCGATG	1 cut(s)	980
BtsCI	GGATG	4 cut(s)	9, 442, 535, 570
BtsI	GCAGTG	1 cut(s)	1431
BtsIMutI	CAGTG	2 cut(s)	195, 1431
BveI	ACCTGC	2 cut(s)	1075, 1213
Cac8I	GCNNGC	5 cut(s)	280, 339, 831, 1257, 1664
CfoI	GCGC	2 cut(s)	1101, 1255
Cfr10I	RCCGGY	2 cut(s)	169, 278
Cfr13I	GGNCC	6 cut(s)	4, 31, 272, 379, 639, 1512
Cfr42I	CCGCGG	1 cut(s)	1234
ClaI	ATCGAT	1 cut(s)	132
CseI	GACGC	1 cut(s)	29
Csp6I	GTAC	1 cut(s)	1413
CviAII	CATG	4 cut(s)	461, 572, 1189, 1306
CviQI	GTAC	1 cut(s)	1413
DdeI	CTNAG	9 cut(s)	447, 474, 769, 792, 912, 1134, 1209, 1416, 1587
DpnI	GATC	9 cut(s)	17, 135, 180, 430, 630, 816, 1237, 1347, 1452
DpnII	GATC	9 cut(s)	15, 133, 178, 428, 628, 814, 1235, 1345, 1450
Eam1104I	CTCTTC	3 cut(s)	115, 245, 596
EarI	CTCTTC	3 cut(s)	115, 245, 596
EciI	GGCGGA	2 cut(s)	297, 441
Ecl136II	GAGCTC	1 cut(s)	321
Eco130I	CCWWGG	1 cut(s)	686
Eco24I	GRGCYC	1 cut(s)	323
Eco47I	GGWCC	4 cut(s)	4, 31, 272, 1512
Eco53kI	GAGCTC	1 cut(s)	321
Eco57I	CTGAAG	3 cut(s)	138, 1167, 1371
Eco91I	GGTNACC	1 cut(s)	679
EcoICRI	GAGCTC	1 cut(s)	321
EcoNI	CCTNNNNNAGG	1 cut(s)	1133
EcoO109I	RGGNCCY	3 cut(s)	31, 272, 1512
EcoO65I	GGTNACC	1 cut(s)	679
EcoRI	GAATTC	2 cut(s)	103, 313
EcoRII	CCWGG	4 cut(s)	228, 760, 1015, 1128
EcoT14I	CCWWGG	1 cut(s)	686
EcoT38I	GRGCYC	1 cut(s)	323
ErhI	CCWWGG	1 cut(s)	686
Esp3I	CGTCTC	1 cut(s)	265
FaeI	CATG	4 cut(s)	464, 575, 1192, 1309
FalI	AAGNNNNNCTT	2 cut(s)	1520, 1552
FaqI	GGGAC	4 cut(s)	17, 285, 905, 1498
FatI	CATG	4 cut(s)	460, 571, 1188, 1305
FauI	CCCGC	3 cut(s)	283, 330, 386
FblI	GTMKAC	1 cut(s)	1144
FokI	GGATG	3 cut(s)	449, 542, 577
FriOI	GRGCYC	1 cut(s)	323
FspBI	CTAG	4 cut(s)	687, 834, 984, 1437
GlaI	GCGC	2 cut(s)	1100, 1254
GsuI	CTGGAG	2 cut(s)	29, 251
HaeIII	GGCC	5 cut(s)	228, 380, 640, 1535, 1568
HapII	CCGG	6 cut(s)	170, 264, 279, 382, 512, 586
HgaI	GACGC	1 cut(s)	29
HhaI	GCGC	2 cut(s)	1101, 1255
Hin1I	GRCGYC	1 cut(s)	21
Hin1II	CATG	4 cut(s)	464, 575, 1192, 1309
Hin6I	GCGC	2 cut(s)	1099, 1253
HinP1I	GCGC	2 cut(s)	1099, 1253
HincII	GTYRAC	1 cut(s)	1145
HindII	GTYRAC	1 cut(s)	1145
HpaII	CCGG	6 cut(s)	170, 264, 279, 382, 512, 586
HphI	GGTGA	5 cut(s)	526, 691, 988, 1150, 1414
Hpy166II	GTNNAC	3 cut(s)	223, 1145, 1226
Hpy188III	TCNNGA	5 cut(s)	13, 34, 46, 62, 137
Hpy8I	GTNNAC	3 cut(s)	223, 1145, 1226
Hpy99I	CGWCG	2 cut(s)	23, 1106
HpyAV	CCTTC	6 cut(s)	427, 858, 943, 1284, 1453, 1558
HpyCH4III	ACNGT	3 cut(s)	88, 214, 1024
HpyCH4V	TGCA	4 cut(s)	307, 782, 919, 1637
HpyF10VI	GCNNNNNNNGC	4 cut(s)	530, 1010, 1088, 1256
HpyF3I	CTNAG	9 cut(s)	447, 474, 769, 792, 912, 1134, 1209, 1416, 1587
Hsp92I	GRCGYC	1 cut(s)	21
Hsp92II	CATG	4 cut(s)	464, 575, 1192, 1309
HspAI	GCGC	2 cut(s)	1099, 1253
KflI	GGGWCCC	1 cut(s)	272
KroI	GCCGGC	1 cut(s)	278
KroNI	GCCGGC	1 cut(s)	280
KspI	CCGCGG	1 cut(s)	1234
Kzo9I	GATC	9 cut(s)	15, 133, 178, 428, 628, 814, 1235, 1345, 1450
LguI	GCTCTTC	1 cut(s)	245
LmnI	GCTCC	6 cut(s)	98, 232, 705, 763, 790, 1018
Lsp1109I	GCAGC	8 cut(s)	520, 794, 903, 1038, 1237, 1578, 1649, 1671
LweI	GCATC	4 cut(s)	520, 603, 928, 1485
MaeI	CTAG	4 cut(s)	687, 834, 984, 1437
MaeIII	GTNAC	5 cut(s)	679, 976, 1062, 1402, 1427
MalI	GATC	9 cut(s)	17, 135, 180, 430, 630, 816, 1237, 1347, 1452
MbiI	CCGCTC	1 cut(s)	93
MboI	GATC	9 cut(s)	15, 133, 178, 428, 628, 814, 1235, 1345, 1450
MfeI	CAATTG	3 cut(s)	503, 872, 1148
MflI	RGATCY	2 cut(s)	1235, 1450
MhlI	GDGCHC	2 cut(s)	323, 831
MlyI	GAGTC	4 cut(s)	34, 173, 1149, 1150
MmeI	TCCRAC	1 cut(s)	1323
MreI	CGCCGGCG	1 cut(s)	278
MroNI	GCCGGC	1 cut(s)	278
MroXI	GAANNNNTTC	1 cut(s)	254
MseI	TTAA	3 cut(s)	408, 1026, 1356
MspA1I	CMGCKG	2 cut(s)	1233, 1591
MspI	CCGG	6 cut(s)	170, 264, 279, 382, 512, 586
MspR9I	CCNGG	6 cut(s)	230, 382, 587, 762, 1017, 1130
MunI	CAATTG	3 cut(s)	503, 872, 1148
MvaI	CCWGG	4 cut(s)	230, 762, 1017, 1130
MvnI	CGCG	3 cut(s)	1099, 1101, 1233
MwoI	GCNNNNNNNGC	4 cut(s)	530, 1010, 1088, 1256
NaeI	GCCGGC	1 cut(s)	280
NciI	CCSGG	2 cut(s)	382, 587
NdeII	GATC	9 cut(s)	15, 133, 178, 428, 628, 814, 1235, 1345, 1450
NgoMIV	GCCGGC	1 cut(s)	278
NlaIII	CATG	4 cut(s)	464, 575, 1192, 1309
NlaIV	GGNNCC	8 cut(s)	33, 273, 274, 510, 641, 759, 1464, 1514
NmuCI	GTSAC	3 cut(s)	679, 976, 1402
NspI	RCATGY	1 cut(s)	575
NspV	TTCGAA	2 cut(s)	851, 1506
PciSI	GCTCTTC	1 cut(s)	245
PdiI	GCCGGC	1 cut(s)	280
PdmI	GAANNNNTTC	1 cut(s)	254
PfeI	GAWTC	7 cut(s)	65, 98, 140, 158, 350, 397, 659
PfoI	TCCNGGA	1 cut(s)	1015
PleI	GAGTC	4 cut(s)	34, 172, 1149, 1149
PpsI	GAGTC	4 cut(s)	34, 172, 1149, 1149
PpuMI	RGGWCCY	3 cut(s)	31, 272, 1512
Psp124BI	GAGCTC	1 cut(s)	323
Psp5II	RGGWCCY	3 cut(s)	31, 272, 1512
Psp6I	CCWGG	4 cut(s)	228, 760, 1015, 1128
PspEI	GGTNACC	1 cut(s)	679
PspGI	CCWGG	4 cut(s)	228, 760, 1015, 1128
PspN4I	GGNNCC	8 cut(s)	33, 273, 274, 510, 641, 759, 1464, 1514
PspPI	GGNCC	6 cut(s)	4, 31, 272, 379, 639, 1512
PspPPI	RGGWCCY	3 cut(s)	31, 272, 1512
PsuI	RGATCY	2 cut(s)	1235, 1450
PvuII	CAGCTG	1 cut(s)	1591
RsaI	GTAC	1 cut(s)	1414
RsaNI	GTAC	1 cut(s)	1413
SacI	GAGCTC	1 cut(s)	323
SacII	CCGCGG	1 cut(s)	1234
SalI	GTCGAC	1 cut(s)	1143
SapI	GCTCTTC	1 cut(s)	245
SaqAI	TTAA	3 cut(s)	408, 1026, 1356
Sau3AI	GATC	9 cut(s)	15, 133, 178, 428, 628, 814, 1235, 1345, 1450
Sau96I	GGNCC	6 cut(s)	4, 31, 272, 379, 639, 1512
ScaI	AGTACT	1 cut(s)	1414
SchI	GAGTC	4 cut(s)	34, 173, 1149, 1150
ScrFI	CCNGG	6 cut(s)	230, 382, 587, 762, 1017, 1130
SduI	GDGCHC	2 cut(s)	323, 831
SfaNI	GCATC	4 cut(s)	520, 603, 928, 1485
SfcI	CTRYAG	1 cut(s)	1083
Sfr303I	CCGCGG	1 cut(s)	1234
SfuI	TTCGAA	2 cut(s)	851, 1506
SgrAI	CRCCGGYG	1 cut(s)	278
SgrBI	CCGCGG	1 cut(s)	1234
SinI	GGWCC	4 cut(s)	4, 31, 272, 1512
SmlI	CTYRAG	1 cut(s)	60
SmoI	CTYRAG	1 cut(s)	60
SspI	AATATT	1 cut(s)	406
SspMI	CTAG	4 cut(s)	687, 834, 984, 1437
SstI	GAGCTC	1 cut(s)	323
StyD4I	CCNGG	6 cut(s)	228, 380, 585, 760, 1015, 1128
StyI	CCWWGG	1 cut(s)	686
TaaI	ACNGT	3 cut(s)	88, 214, 1024
TatI	WGTACW	1 cut(s)	1412
TauI	GCSGC	3 cut(s)	377, 380, 393
TfiI	GAWTC	7 cut(s)	65, 98, 140, 158, 350, 397, 659
Tru1I	TTAA	3 cut(s)	408, 1026, 1356
Tru9I	TTAA	3 cut(s)	408, 1026, 1356
TscAI	CASTG	2 cut(s)	202, 1438
TseFI	GTSAC	3 cut(s)	679, 976, 1402
TseI	GCWGC	8 cut(s)	533, 782, 916, 1051, 1250, 1591, 1637, 1659
Tsp45I	GTSAC	3 cut(s)	679, 976, 1402
TspDTI	ATGAA	8 cut(s)	449, 495, 570, 731, 1058, 1205, 1214, 1298
TspGWI	ACGGA	1 cut(s)	383
TspRI	CASTG	2 cut(s)	202, 1438
VpaK11BI	GGWCC	4 cut(s)	4, 31, 272, 1512
XagI	CCTNNNNNAGG	1 cut(s)	1133
XapI	RAATTY	6 cut(s)	103, 313, 518, 633, 1352, 1468
XceI	RCATGY	1 cut(s)	575
XmaJI	CCTAGG	1 cut(s)	686
XmiI	GTMKAC	1 cut(s)	1144
XmnI	GAANNNNTTC	1 cut(s)	254
XspI	CTAG	4 cut(s)	687, 834, 984, 1437
ZrmI	AGTACT	1 cut(s)	1414

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.