Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001974.1

Orthogroup ID

OG0006125

Physical Location & Seq

Genomic Coordinates Forward (+)

128019 .. 135824

Gene Structure 7806 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001974.1_g000029.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3012 bp

atgtctctgaggaaatccttcctctctcggaaattctccaaatccttccgagaattcaacggcagccaggcccgcggcggcggcgaccggcgagtcgtgcacgactcggccgagttggaccgggtctcggacagtgtggagtcgacggcgtcgtcgtggtcgactttgctgccggagctcctgggcgagatcatacagcgagtggaggacagcgaggacaagtggccgcaccgccaaaacgtcgtcgcctgcgcctgtgtctgcaagcggtggagggatattaccaaggagatcgtgagaacgccttccgccaatggcagaattaccttcccttcttgccttaagcagccaggaccatctgatttcccgcatcaatgtctaataaaacgaaacaagaagacctcaacgttttacctttatcttgctcttaccccatcattcatggataagggaaagtttctgttagcagcacggagatacaggcgtgggtcacacactgagtacataatatcacttgatgctgaagacatctctcaaggaagcaatgcctatgtgggaaaattaagctcggattttctgggtacgaattttacaatttatgatagtcagccaccacatagtggtgcaaagcctgcaagcagaaggtccagccgccgttttgcaagcaagcaaataagcccccaagttccagcaggcaactttgaagttggacaggtgtcttacagattcaaccttctaaaatctagaggtccaaggaggatgatttgcccgctaaattgcccagcctcaggtggaagtggaaactctgagatgaagaaaccagattatggcagtggtcataacacagtcttgaggaataaagctccaagatggcatgatcagttacagtgctggtgtttgaatttccatggtcgggtcacagtagcatcagtgaagaactttcagttggttgtagcattggatccgaaaggagatgacgaaacggttctccagtttggcaaagtgggtgatgatacatttaccatggattttaggcaccccttgtcagcttttcaggcttttgctatctgccttactagctttggcacgaaactggcgtgtttcgagtcttgttatcgggtcgtgtcggaattgacagccctaacatcctggggccgtttcgtaattccaccaccaactcacaatccgaatccctctaggaaaaaaaacccaccgcctccatcaacacgctttgtgttccttctctccaccgcctacgcttcctataaaaaccgcgtcccacaacggctcttatccattaacctgtttcccaaaatcgatcctcgtcgattacacatggaccacatccagatcgacgccgatgaggtaccgatgactctccagaacaccgatactcaagattcctgttccgattgcgataccgtccgctccgaatcgaattcctcttcttctgaagaaatcgaaatcgatcaggattcccagtccgattgcgaatcggagtcgtcggtttccgatccgattggggctttcactgaaaacgaaattacggttagagtcgacggcctggagcgtgagactattacgaagagcttcgtctccggtatgggacccgccggcggagaaaccagagtggtggctgtgcataagaattcgagttctggtctgacacggcgggcgaggttcgattcgtttcgggttttcacggaggcggcggcccggaaatgcggcgggaatccgaatattaagtatggttggtacggcggatcgaaggatgagattactgagattttggttcatggatttagtgctaagaatgaaaaggttggtggtggaatacaattggttccggtgaaattcgctttggatgctgcggtgggttctggtgttgatgaagatgggatgaggcatgtgctgctgtgccgggttatactggggaagagtgagttgatgcctaatggttcggatcaaattcggccccgttcgattgagtttgattctggtgtggatagtctggtgacccctaggaagtatattgtgtggagtaatttgatgaactcgcatatctgtcctgcttatgttgtgagcttcaaggctcctggttgcttagagaagtatccagctcctcctcagaagtctattagcttccttgatctgttgtctgtgctcgctaggttcttgcctccttcgaaaatggctgtgctgtgccaattgcgtgatgattactgggacaagaagattagtttagctgagctgcatcggaagttgaagcaagaagttgatgggaaggttctggcttctgcgatgagattggtgacacctagacaggcgagtgctggtgcttttcctgctcctggaactgttaatttgccacatttgatgaaagtgctgccgttgttgttacctgcttcggaaatggctgtagttgccaaatcgcgcgacgattacttggcaaagaagattagcctggctgaggtgagtcgacaattgagactcatagttgataaaaaggttatggcttcagccatgaaattgatgaaacctgctcagagaagctctggtttacaccgcggatctcttgtgatggccgcgctggcaaggttcttgcctccttcacagatgaaaatacttggcagattgatcatggatttcagggcaaagaagattagtggagatgagttggatcgaaaatttaagctcatagttgatgacaaggtgttggcttcagctatcaaattggtgacaccaagtactcagcagaggagtatcactgctagtgatattagagatcttttgaaggtgccaaattcttcaatatatttccctgctctgatgcccgtgttcgaaaggtccctatctcctcaaaagatggccttgcttaccaaaagcctcaatgatttgaaggccaagaagattaccagacctcagctgcttcaaagagtgaaactcatagttggtaatgagttgttggttgcagcagtcaaatcttacagaagcagccagcaacatgtgtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005886 GO:0006355 GO:0007275 GO:0008150 GO:0008289 GO:0009536 GO:0009555 GO:0009605 GO:0009607 GO:0009620 GO:0009889 GO:0010468 GO:0010556 GO:0016020 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0035091 GO:0043167 GO:0043168 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044212 GO:0044424 GO:0044444 GO:0044464 GO:0048229 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0060255 GO:0065007 GO:0071944 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

F-box Tub

Protein Analysis

1003

Amino Acids

111.3

Weight (kDa)

9.57

Isoelectric Point (pI)

49.87

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006125)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53320
fragaria_vesca	FvH4_3g18240 FvH4_3g18250
malus_domestica	MD03G1243700.v1.1 MD11G1264100.v1.1
prunus_persica	Prupe.4G164400_v2.0.a1
pyrus_communis	pycom03g19050 pycom11g23260
rosa_chinensis	RchiOBHm_Chr5g0030861 RchiOBHm_Chr5g0030871
rosa_laevigata	RLG00000033258 RLG00000033259
rosa_multiflora	Rmu_sc0001974.1_g000029
rosa_roxburghii	Rroxscaffold_1G00049390 Rroxscaffold_1G00049400
rosa_rugosa	Rorug05G0121000 Rorug05G0121000
rosa_samantha	Rh5AG214000 Rh5AG214100 Rh5BG213200 Rh5BG213300 Rh5CG237000 Rh5CG237100 Rh5DG217600 Rh5DG217700
rosa_wichuraiana	Rw5G019560 Rw5G019570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	92, 151
Acc36I	ACCTGC	2 cut(s)	2410, 2548
Acc65I	GGTACC	1 cut(s)	1366
AccB1I	GGYRCC	3 cut(s)	1035, 1366, 2797
AccB7I	CCANNNNNTGG	2 cut(s)	620, 827
AccBSI	CCGCTC	1 cut(s)	1428
AccI	GTMKAC	4 cut(s)	143, 161, 1557, 2479
AccII	CGCG	6 cut(s)	75, 1275, 2434, 2436, 2568, 2588
AclI	AACGTT	1 cut(s)	407
AclWI	GGATC	8 cut(s)	956, 969, 1313, 1508, 1771, 1971, 2578, 2688
AcoI	YGGCCR	3 cut(s)	108, 224, 2583
AcuI	CTGAAG	4 cut(s)	543, 1473, 2502, 2706
AcyI	GRCGYC	2 cut(s)	149, 1356
AdeI	CACNNNGTG	1 cut(s)	620
AfaI	GTAC	5 cut(s)	503, 583, 1368, 1757, 2749
AfiI	CCNNNNNNNGG	8 cut(s)	127, 620, 788, 827, 913, 1616, 2351, 2470
AflII	CTTAAG	1 cut(s)	341
AflIII	ACRYGT	1 cut(s)	3004
AjnI	CCWGG	8 cut(s)	66, 180, 349, 1148, 1563, 2095, 2350, 2463
AjuI	GAANNNNNNNTTGG	4 cut(s)	929, 961, 1844, 1876
Alw21I	GWGCWC	3 cut(s)	102, 180, 2166
Alw26I	GTCTC	5 cut(s)	9, 130, 1568, 1600, 2482
Alw44I	GTGCAC	1 cut(s)	98
AlwI	GGATC	8 cut(s)	956, 969, 1313, 1508, 1771, 1971, 2578, 2688
ApaLI	GTGCAC	1 cut(s)	98
Asp700I	GAANNNNTTC	4 cut(s)	17, 304, 984, 1589
Asp718I	GGTACC	1 cut(s)	1366
AspA2I	CCTAGG	1 cut(s)	2021
AspLEI	GCGC	3 cut(s)	254, 2436, 2590
AsuC2I	CCSGG	3 cut(s)	122, 1717, 1922
AsuHPI	GGTGA	6 cut(s)	1019, 1861, 2026, 2323, 2485, 2749
AsuII	TTCGAA	2 cut(s)	2186, 2841
AvaII	GGWCC	7 cut(s)	118, 353, 645, 749, 1339, 1607, 2847
AvrII	CCTAGG	1 cut(s)	2021
AxyI	CCTNAGG	1 cut(s)	787
BaeGI	GKGCMC	1 cut(s)	102
BaeI	ACNNNNGTAYC	2 cut(s)	469, 502
BamHI	GGATCC	1 cut(s)	961
BanI	GGYRCC	3 cut(s)	1035, 1366, 2797
BanII	GRGCYC	1 cut(s)	180
BbsI	GAAGAC	2 cut(s)	404, 531
Bbv12I	GWGCWC	3 cut(s)	102, 180, 2166
BbvCI	CCTCAGC	2 cut(s)	2469, 2922
BccI	CCATC	8 cut(s)	364, 442, 864, 1228, 1889, 2273, 2575, 2860
BceAI	ACGGC	9 cut(s)	76, 162, 639, 1140, 1301, 1576, 1685, 1774, 2374
BcgI	CGANNNNNNTGC	2 cut(s)	151, 185
BciT130I	CCWGG	8 cut(s)	68, 182, 351, 1150, 1565, 2097, 2352, 2465
BciVI	GTATCC	1 cut(s)	2124
BclI	TGATCA	2 cut(s)	877, 2637
BcnI	CCSGG	3 cut(s)	122, 1717, 1922
BcoDI	GTCTC	5 cut(s)	9, 130, 1568, 1600, 2482
BfaI	CTAG	7 cut(s)	744, 1077, 1197, 2022, 2169, 2319, 2772
BfmI	CTRYAG	1 cut(s)	2418
BfrI	CTTAAG	1 cut(s)	341
BfuAI	ACCTGC	2 cut(s)	2410, 2548
BfuI	GTATCC	1 cut(s)	2124
BglI	GCCNNNNNGGC	1 cut(s)	2591
BglII	AGATCT	1 cut(s)	2785
BlnI	CCTAGG	1 cut(s)	2021
BlpI	GCTNAGC	1 cut(s)	2247
BmcAI	AGTACT	1 cut(s)	2749
Bme18I	GGWCC	7 cut(s)	118, 353, 645, 749, 1339, 1607, 2847
BmrI	ACTGGG	3 cut(s)	1474, 1940, 2233
BmsI	GCATC	7 cut(s)	379, 508, 935, 1855, 1938, 2263, 2820
BmuI	ACTGGG	3 cut(s)	1474, 1940, 2233
BoxI	GACNNNNGTC	1 cut(s)	715
BpiI	GAAGAC	2 cut(s)	404, 531
BplI	GAGNNNNNCTC	2 cut(s)	2928, 2960
BpmI	CTGGAG	3 cut(s)	974, 1364, 1586
Bpu10I	CCTNAGC	2 cut(s)	2469, 2922
Bpu1102I	GCTNAGC	1 cut(s)	2247
Bpu14I	TTCGAA	2 cut(s)	2186, 2841
BpuEI	CTTGAG	3 cut(s)	519, 871, 1380
BpuMI	CCSGG	3 cut(s)	122, 1717, 1922
Bsa29I	ATCGAT	2 cut(s)	1317, 1467
BsaHI	GRCGYC	2 cut(s)	149, 1356
BsaI	GGTCTC	1 cut(s)	130
BsaJI	CCNNGG	9 cut(s)	73, 181, 285, 752, 907, 1023, 1149, 2021, 2566
BsaWI	WCCGGW	2 cut(s)	1598, 1846
Bsc4I	CCNNNNNNNGG	8 cut(s)	127, 620, 788, 827, 913, 1616, 2351, 2470
Bse118I	RCCGGY	2 cut(s)	87, 1613
Bse1I	ACTGG	5 cut(s)	991, 1098, 1480, 1935, 2228
Bse21I	CCTNAGG	1 cut(s)	787
Bse3DI	GCAATG	1 cut(s)	550
BseBI	CCWGG	8 cut(s)	68, 182, 351, 1150, 1565, 2097, 2352, 2465
BseCI	ATCGAT	2 cut(s)	1317, 1467
BseDI	CCNNGG	9 cut(s)	73, 181, 285, 752, 907, 1023, 1149, 2021, 2566
BseGI	GGATG	6 cut(s)	765, 1145, 1344, 1777, 1870, 1905
BseLI	CCNNNNNNNGG	8 cut(s)	127, 620, 788, 827, 913, 1616, 2351, 2470
BseMI	GCAATG	1 cut(s)	550
BseNI	ACTGG	5 cut(s)	991, 1098, 1480, 1935, 2228
BseRI	GAGGAG	4 cut(s)	2112, 2115, 2773, 2847
BseSI	GKGCMC	1 cut(s)	102
BseX3I	CGGCCG	1 cut(s)	108
BseYI	CCCAGC	1 cut(s)	781
Bsh1236I	CGCG	6 cut(s)	75, 1275, 2434, 2436, 2568, 2588
Bsh1285I	CGRYCG	2 cut(s)	88, 111
BshNI	GGYRCC	3 cut(s)	1035, 1366, 2797
BshVI	ATCGAT	2 cut(s)	1317, 1467
BsiEI	CGRYCG	2 cut(s)	88, 111
BsiHKAI	GWGCWC	3 cut(s)	102, 180, 2166
BsiSI	CCGG	8 cut(s)	88, 121, 173, 1599, 1614, 1717, 1847, 1921
BslFI	GGGAC	4 cut(s)	1262, 1620, 2240, 2833
BslI	CCNNNNNNNGG	8 cut(s)	127, 620, 788, 827, 913, 1616, 2351, 2470
BsmAI	GTCTC	5 cut(s)	9, 130, 1568, 1600, 2482
BsmBI	CGTCTC	1 cut(s)	1600
BsmFI	GGGAC	4 cut(s)	1262, 1620, 2240, 2833
Bso31I	GGTCTC	1 cut(s)	130
Bsp119I	TTCGAA	2 cut(s)	2186, 2841
Bsp1286I	GDGCHC	3 cut(s)	102, 180, 2166
Bsp1720I	GCTNAGC	1 cut(s)	2247
Bsp19I	CCATGG	2 cut(s)	907, 1023
BspDI	ATCGAT	2 cut(s)	1317, 1467
BspFNI	CGCG	6 cut(s)	75, 1275, 2434, 2436, 2568, 2588
BspMI	ACCTGC	2 cut(s)	2410, 2548
BspPI	GGATC	8 cut(s)	956, 969, 1313, 1508, 1771, 1971, 2578, 2688
BspQI	GCTCTTC	1 cut(s)	1580
BspT104I	TTCGAA	2 cut(s)	2186, 2841
BspT107I	GGYRCC	3 cut(s)	1035, 1366, 2797
BspTI	CTTAAG	1 cut(s)	341
BspTNI	GGTCTC	1 cut(s)	130
BsrBI	CCGCTC	1 cut(s)	1428
BsrDI	GCAATG	1 cut(s)	550
BsrFI	RCCGGY	2 cut(s)	87, 1613
BsrI	ACTGG	5 cut(s)	991, 1098, 1480, 1935, 2228
BssAI	RCCGGY	2 cut(s)	87, 1613
BssECI	CCNNGG	9 cut(s)	73, 181, 285, 752, 907, 1023, 1149, 2021, 2566
BssNI	GRCGYC	2 cut(s)	149, 1356
BssT1I	CCWWGG	5 cut(s)	285, 752, 907, 1023, 2021
Bst2UI	CCWGG	8 cut(s)	68, 182, 351, 1150, 1565, 2097, 2352, 2465
Bst4CI	ACNGT	8 cut(s)	134, 847, 888, 922, 985, 1423, 1549, 2359
Bst6I	CTCTTC	3 cut(s)	1450, 1580, 1931
BstACI	GRCGYC	2 cut(s)	149, 1356
BstAFI	CTTAAG	1 cut(s)	341
BstAPI	GCANNNNNTGC	2 cut(s)	632, 1912
BstBI	TTCGAA	2 cut(s)	2186, 2841
BstDSI	CCRYGG	4 cut(s)	73, 907, 1023, 2566
BstEII	GGTNACC	1 cut(s)	2014
BstENI	CCTNNNNNAGG	1 cut(s)	2468
BstF5I	GGATG	6 cut(s)	765, 1145, 1344, 1777, 1870, 1905
BstFNI	CGCG	6 cut(s)	75, 1275, 2434, 2436, 2568, 2588
BstHHI	GCGC	3 cut(s)	254, 2436, 2590
BstMAI	GTCTC	5 cut(s)	9, 130, 1568, 1600, 2482
BstMCI	CGRYCG	2 cut(s)	88, 111
BstNI	CCWGG	8 cut(s)	68, 182, 351, 1150, 1565, 2097, 2352, 2465
BstNSI	RCATGY	2 cut(s)	1910, 3008
BstPAI	GACNNNNGTC	1 cut(s)	715
BstPI	GGTNACC	1 cut(s)	2014
BstSFI	CTRYAG	1 cut(s)	2418
BstSLI	GKGCMC	1 cut(s)	102
BstUI	CGCG	6 cut(s)	75, 1275, 2434, 2436, 2568, 2588
BstV2I	GAAGAC	2 cut(s)	404, 531
BstX2I	RGATCY	3 cut(s)	961, 2570, 2785
BstXI	CCANNNNNNTGG	1 cut(s)	1633
BstYI	RGATCY	3 cut(s)	961, 2570, 2785
BstZI	CGGCCG	1 cut(s)	108
Bsu15I	ATCGAT	2 cut(s)	1317, 1467
Bsu36I	CCTNAGG	1 cut(s)	787
BsuI	GTATCC	1 cut(s)	2124
BsuTUI	ATCGAT	2 cut(s)	1317, 1467
BtgI	CCRYGG	4 cut(s)	73, 907, 1023, 2566
BtgZI	GCGATG	1 cut(s)	2315
BtsCI	GGATG	6 cut(s)	765, 1145, 1344, 1777, 1870, 1905
BtsI	GCAGTG	2 cut(s)	838, 2766
BtsIMutI	CAGTG	7 cut(s)	139, 495, 838, 893, 936, 1530, 2766
BveI	ACCTGC	2 cut(s)	2410, 2548
CfoI	GCGC	3 cut(s)	254, 2436, 2590
Cfr10I	RCCGGY	2 cut(s)	87, 1613
Cfr42I	CCGCGG	2 cut(s)	76, 2569
ClaI	ATCGAT	2 cut(s)	1317, 1467
CseI	GACGC	3 cut(s)	138, 1264, 1364
Csp6I	GTAC	5 cut(s)	502, 582, 1367, 1756, 2748
CviQI	GTAC	5 cut(s)	502, 582, 1367, 1756, 2748
DraIII	CACNNNGTG	1 cut(s)	620
DrdI	GACNNNNNNGTC	2 cut(s)	92, 151
DseDI	GACNNNNNNGTC	2 cut(s)	92, 151
EaeI	YGGCCR	3 cut(s)	108, 224, 2583
EagI	CGGCCG	1 cut(s)	108
Eam1104I	CTCTTC	3 cut(s)	1450, 1580, 1931
EarI	CTCTTC	3 cut(s)	1450, 1580, 1931
EciI	GGCGGA	3 cut(s)	298, 1632, 1776
Ecl136II	GAGCTC	1 cut(s)	178
EclXI	CGGCCG	1 cut(s)	108
Eco130I	CCWWGG	5 cut(s)	285, 752, 907, 1023, 2021
Eco24I	GRGCYC	1 cut(s)	180
Eco31I	GGTCTC	1 cut(s)	130
Eco47I	GGWCC	7 cut(s)	118, 353, 645, 749, 1339, 1607, 2847
Eco52I	CGGCCG	1 cut(s)	108
Eco53kI	GAGCTC	1 cut(s)	178
Eco57I	CTGAAG	4 cut(s)	543, 1473, 2502, 2706
Eco81I	CCTNAGG	1 cut(s)	787
Eco91I	GGTNACC	1 cut(s)	2014
EcoICRI	GAGCTC	1 cut(s)	178
EcoNI	CCTNNNNNAGG	1 cut(s)	2468
EcoO109I	RGGNCCY	2 cut(s)	1607, 2847
EcoO65I	GGTNACC	1 cut(s)	2014
EcoRI	GAATTC	3 cut(s)	53, 1438, 1648
EcoRII	CCWGG	8 cut(s)	66, 180, 349, 1148, 1563, 2095, 2350, 2463
EcoT14I	CCWWGG	5 cut(s)	285, 752, 907, 1023, 2021
EcoT38I	GRGCYC	1 cut(s)	180
ErhI	CCWWGG	5 cut(s)	285, 752, 907, 1023, 2021
Esp3I	CGTCTC	1 cut(s)	1600
FalI	AAGNNNNNCTT	2 cut(s)	2855, 2887
FaqI	GGGAC	4 cut(s)	1262, 1620, 2240, 2833
FauI	CCCGC	6 cut(s)	80, 375, 777, 1618, 1665, 1721
FbaI	TGATCA	2 cut(s)	877, 2637
FblI	GTMKAC	4 cut(s)	143, 161, 1557, 2479
FokI	GGATG	6 cut(s)	772, 1132, 1331, 1784, 1877, 1912
FriOI	GRGCYC	1 cut(s)	180
FspBI	CTAG	7 cut(s)	744, 1077, 1197, 2022, 2169, 2319, 2772
GlaI	GCGC	3 cut(s)	253, 2435, 2589
GsaI	CCCAGC	1 cut(s)	785
GsuI	CTGGAG	3 cut(s)	974, 1364, 1586
HapII	CCGG	8 cut(s)	88, 121, 173, 1599, 1614, 1717, 1847, 1921
HgaI	GACGC	3 cut(s)	138, 1264, 1364
HhaI	GCGC	3 cut(s)	254, 2436, 2590
Hin1I	GRCGYC	2 cut(s)	149, 1356
Hin6I	GCGC	3 cut(s)	252, 2434, 2588
HinP1I	GCGC	3 cut(s)	252, 2434, 2588
HincII	GTYRAC	4 cut(s)	144, 162, 1558, 2480
HindII	GTYRAC	4 cut(s)	144, 162, 1558, 2480
HpaII	CCGG	8 cut(s)	88, 121, 173, 1599, 1614, 1717, 1847, 1921
HphI	GGTGA	6 cut(s)	1019, 1861, 2026, 2323, 2485, 2749
Hpy166II	GTNNAC	6 cut(s)	100, 144, 162, 1558, 2480, 2561
Hpy188III	TCNNGA	7 cut(s)	295, 744, 850, 1348, 1381, 1397, 1472
Hpy8I	GTNNAC	6 cut(s)	100, 144, 162, 1558, 2480, 2561
HpyCH4III	ACNGT	8 cut(s)	134, 847, 888, 922, 985, 1423, 1549, 2359
HpyCH4IV	ACGT	2 cut(s)	240, 407
HpyCH4V	TGCA	8 cut(s)	100, 264, 626, 635, 662, 1642, 2254, 2972
HpySE526I	ACGT	2 cut(s)	240, 407
Hsp92I	GRCGYC	2 cut(s)	149, 1356
HspAI	GCGC	3 cut(s)	252, 2434, 2588
KflI	GGGWCCC	1 cut(s)	1607
KpnI	GGTACC	1 cut(s)	1370
KroI	GCCGGC	1 cut(s)	1613
KroNI	GCCGGC	1 cut(s)	1615
Ksp22I	TGATCA	2 cut(s)	877, 2637
KspI	CCGCGG	2 cut(s)	76, 2569
LguI	GCTCTTC	1 cut(s)	1580
LmnI	GCTCC	8 cut(s)	175, 183, 868, 1433, 1567, 2098, 2125, 2353
LweI	GCATC	7 cut(s)	379, 508, 935, 1855, 1938, 2263, 2820
MaeI	CTAG	7 cut(s)	744, 1077, 1197, 2022, 2169, 2319, 2772
MaeII	ACGT	2 cut(s)	240, 407
MaeIII	GTNAC	7 cut(s)	489, 882, 916, 2014, 2311, 2397, 2737
MbiI	CCGCTC	1 cut(s)	1428
MfeI	CAATTG	3 cut(s)	1838, 2207, 2483
MflI	RGATCY	3 cut(s)	961, 2570, 2785
MhlI	GDGCHC	3 cut(s)	102, 180, 2166
MlyI	GAGTC	9 cut(s)	98, 102, 149, 1115, 1369, 1508, 1563, 2484, 2485
MmeI	TCCRAC	4 cut(s)	96, 688, 1107, 2658
MreI	CGCCGGCG	1 cut(s)	1613
MroNI	GCCGGC	1 cut(s)	1613
MroXI	GAANNNNTTC	4 cut(s)	17, 304, 984, 1589
MseI	TTAA	6 cut(s)	342, 563, 1299, 1743, 2361, 2691
MslI	CAYNNNNRTG	1 cut(s)	621
MspA1I	CMGCKG	3 cut(s)	75, 2568, 2926
MspCI	CTTAAG	1 cut(s)	341
MspI	CCGG	8 cut(s)	88, 121, 173, 1599, 1614, 1717, 1847, 1921
MunI	CAATTG	3 cut(s)	1838, 2207, 2483
MvaI	CCWGG	8 cut(s)	68, 182, 351, 1150, 1565, 2097, 2352, 2465
MvnI	CGCG	6 cut(s)	75, 1275, 2434, 2436, 2568, 2588
NaeI	GCCGGC	1 cut(s)	1615
NciI	CCSGG	3 cut(s)	122, 1717, 1922
NcoI	CCATGG	2 cut(s)	907, 1023
NgoMIV	GCCGGC	1 cut(s)	1613
NmeAIII	GCCGAG	2 cut(s)	86, 136
NmuCI	GTSAC	5 cut(s)	489, 916, 2014, 2311, 2737
NspI	RCATGY	2 cut(s)	1910, 3008
NspV	TTCGAA	2 cut(s)	2186, 2841
PciI	ACATGT	1 cut(s)	3004
PciSI	GCTCTTC	1 cut(s)	1580
PcsI	WCGNNNNNNNCGW	5 cut(s)	108, 149, 152, 158, 1094
PdiI	GCCGGC	1 cut(s)	1615
PdmI	GAANNNNTTC	4 cut(s)	17, 304, 984, 1589
PfeI	GAWTC	9 cut(s)	726, 1189, 1400, 1433, 1475, 1493, 1685, 1732, 1994
PflFI	GACNNNGTC	2 cut(s)	122, 148
PflMI	CCANNNNNTGG	2 cut(s)	620, 827
PfoI	TCCNGGA	1 cut(s)	2350
PleI	GAGTC	9 cut(s)	98, 101, 148, 1114, 1369, 1507, 1562, 2484, 2484
PpsI	GAGTC	9 cut(s)	98, 101, 148, 1114, 1369, 1507, 1562, 2484, 2484
PpuMI	RGGWCCY	2 cut(s)	1607, 2847
PscI	ACATGT	1 cut(s)	3004
PshAI	GACNNNNGTC	1 cut(s)	715
Psp124BI	GAGCTC	1 cut(s)	180
Psp1406I	AACGTT	1 cut(s)	407
Psp5II	RGGWCCY	2 cut(s)	1607, 2847
Psp6I	CCWGG	8 cut(s)	66, 180, 349, 1148, 1563, 2095, 2350, 2463
PspEI	GGTNACC	1 cut(s)	2014
PspFI	CCCAGC	1 cut(s)	781
PspGI	CCWGG	8 cut(s)	66, 180, 349, 1148, 1563, 2095, 2350, 2463
PspPPI	RGGWCCY	2 cut(s)	1607, 2847
PsuI	RGATCY	3 cut(s)	961, 2570, 2785
PsyI	GACNNNGTC	2 cut(s)	122, 148
PvuII	CAGCTG	1 cut(s)	2926
RsaI	GTAC	5 cut(s)	503, 583, 1368, 1757, 2749
RsaNI	GTAC	5 cut(s)	502, 582, 1367, 1756, 2748
RseI	CAYNNNNRTG	1 cut(s)	621
SacI	GAGCTC	1 cut(s)	180
SacII	CCGCGG	2 cut(s)	76, 2569
SalI	GTCGAC	4 cut(s)	142, 160, 1556, 2478
SapI	GCTCTTC	1 cut(s)	1580
SaqAI	TTAA	6 cut(s)	342, 563, 1299, 1743, 2361, 2691
ScaI	AGTACT	1 cut(s)	2749
SchI	GAGTC	9 cut(s)	98, 102, 149, 1115, 1369, 1508, 1563, 2484, 2485
SduI	GDGCHC	3 cut(s)	102, 180, 2166
SfaNI	GCATC	7 cut(s)	379, 508, 935, 1855, 1938, 2263, 2820
SfcI	CTRYAG	1 cut(s)	2418
Sfr303I	CCGCGG	2 cut(s)	76, 2569
SfuI	TTCGAA	2 cut(s)	2186, 2841
SgrAI	CRCCGGYG	1 cut(s)	1613
SgrBI	CCGCGG	2 cut(s)	76, 2569
SinI	GGWCC	7 cut(s)	118, 353, 645, 749, 1339, 1607, 2847
SmiMI	CAYNNNNRTG	1 cut(s)	621
SmlI	CTYRAG	4 cut(s)	341, 534, 850, 1395
SmoI	CTYRAG	4 cut(s)	341, 534, 850, 1395
SspI	AATATT	1 cut(s)	1741
SspMI	CTAG	7 cut(s)	744, 1077, 1197, 2022, 2169, 2319, 2772
SstI	GAGCTC	1 cut(s)	180
StyI	CCWWGG	5 cut(s)	285, 752, 907, 1023, 2021
TaaI	ACNGT	8 cut(s)	134, 847, 888, 922, 985, 1423, 1549, 2359
TaiI	ACGT	2 cut(s)	243, 410
TatI	WGTACW	2 cut(s)	501, 2747
TauI	GCSGC	9 cut(s)	78, 81, 84, 229, 654, 1712, 1715, 1728, 2588
TfiI	GAWTC	9 cut(s)	726, 1189, 1400, 1433, 1475, 1493, 1685, 1732, 1994
Tru1I	TTAA	6 cut(s)	342, 563, 1299, 1743, 2361, 2691
Tru9I	TTAA	6 cut(s)	342, 563, 1299, 1743, 2361, 2691
TscAI	CASTG	7 cut(s)	139, 502, 838, 893, 936, 1537, 2773
TseFI	GTSAC	5 cut(s)	489, 916, 2014, 2311, 2737
Tsp45I	GTSAC	5 cut(s)	489, 916, 2014, 2311, 2737
TspGWI	ACGGA	2 cut(s)	487, 1718
TspRI	CASTG	7 cut(s)	139, 502, 838, 893, 936, 1537, 2773
Tth111I	GACNNNGTC	2 cut(s)	122, 148
Van91I	CCANNNNNTGG	2 cut(s)	620, 827
Vha464I	CTTAAG	1 cut(s)	341
VneI	GTGCAC	1 cut(s)	98
VpaK11BI	GGWCC	7 cut(s)	118, 353, 645, 749, 1339, 1607, 2847
XagI	CCTNNNNNAGG	1 cut(s)	2468
XbaI	TCTAGA	1 cut(s)	743
XceI	RCATGY	2 cut(s)	1910, 3008
XmaJI	CCTAGG	1 cut(s)	2021
XmiI	GTMKAC	4 cut(s)	143, 161, 1557, 2479
XmnI	GAANNNNTTC	4 cut(s)	17, 304, 984, 1589
XspI	CTAG	7 cut(s)	744, 1077, 1197, 2022, 2169, 2319, 2772
ZrmI	AGTACT	1 cut(s)	2749

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.