Tubby-like F-box protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G53320 |
| fragaria_vesca | FvH4_3g18240 FvH4_3g18250 |
| malus_domestica | MD03G1243700.v1.1 MD11G1264100.v1.1 |
| prunus_persica | Prupe.4G164400_v2.0.a1 |
| pyrus_communis | pycom03g19050 pycom11g23260 |
| rosa_chinensis | RchiOBHm_Chr5g0030861 RchiOBHm_Chr5g0030871 |
| rosa_laevigata | RLG00000033258 RLG00000033259 |
| rosa_multiflora | Rmu_sc0001974.1_g000029 |
| rosa_roxburghii | Rroxscaffold_1G00049390 Rroxscaffold_1G00049400 |
| rosa_rugosa | Rorug05G0121000 Rorug05G0121000 |
| rosa_samantha | Rh5AG214000 Rh5AG214100 Rh5BG213200 Rh5BG213300 Rh5CG237000 Rh5CG237100 Rh5DG217600 Rh5DG217700 |
| rosa_wichuraiana | Rw5G019560 Rw5G019570 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 95 |
| AccB1I | GGYRCC | 2 cut(s) | 584, 1121 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 244 |
| AccI | GTMKAC | 1 cut(s) | 650 |
| AccII | CGCG | 4 cut(s) | 79, 126, 299, 301 |
| AciI | CCGC | 7 cut(s) | 10, 124, 235, 271, 301, 617, 773 |
| AclI | AACGTT | 1 cut(s) | 410 |
| AclWI | GGATC | 1 cut(s) | 78 |
| AcoI | YGGCCR | 2 cut(s) | 91, 111 |
| AcsI | RAATTY | 3 cut(s) | 32, 728, 922 |
| AfaI | GTAC | 1 cut(s) | 314 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 109, 244, 623, 691, 873, 934 |
| AgsI | TTSAA | 5 cut(s) | 707, 733, 809, 835, 922 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 148 |
| AjnI | CCWGG | 3 cut(s) | 352, 994, 1089 |
| AluBI | AGCT | 7 cut(s) | 181, 470, 570, 845, 884, 967, 1116 |
| AluI | AGCT | 7 cut(s) | 181, 470, 570, 845, 884, 967, 1116 |
| Alw21I | GWGCWC | 1 cut(s) | 183 |
| Alw26I | GTCTC | 3 cut(s) | 99, 724, 1002 |
| AlwI | GGATC | 1 cut(s) | 78 |
| AoxI | GGCC | 4 cut(s) | 91, 111, 227, 356 |
| ApeKI | GCWGC | 2 cut(s) | 470, 1072 |
| ApoI | RAATTY | 3 cut(s) | 32, 728, 922 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1020 |
| AspLEI | GCGC | 2 cut(s) | 79, 301 |
| AspS9I | GGNCC | 4 cut(s) | 121, 356, 752, 982 |
| AsuC2I | CCSGG | 2 cut(s) | 28, 176 |
| AsuHPI | GGTGA | 5 cut(s) | 224, 277, 319, 436, 1055 |
| AsuNHI | GCTAGC | 1 cut(s) | 212 |
| AvaII | GGWCC | 3 cut(s) | 121, 752, 982 |
| BaeGI | GKGCMC | 1 cut(s) | 587 |
| BanI | GGYRCC | 2 cut(s) | 584, 1121 |
| BanII | GRGCYC | 1 cut(s) | 183 |
| BbsI | GAAGAC | 2 cut(s) | 147, 407 |
| Bbv12I | GWGCWC | 1 cut(s) | 183 |
| BbvI | GCAGC | 2 cut(s) | 457, 1084 |
| BccI | CCATC | 3 cut(s) | 445, 796, 885 |
| BceAI | ACGGC | 2 cut(s) | 106, 874 |
| BciT130I | CCWGG | 3 cut(s) | 354, 996, 1091 |
| BclI | TGATCA | 1 cut(s) | 898 |
| BcnI | CCSGG | 2 cut(s) | 28, 176 |
| BcoDI | GTCTC | 3 cut(s) | 99, 724, 1002 |
| BfaI | CTAG | 2 cut(s) | 213, 425 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1091 |
| BisI | GCNGC | 2 cut(s) | 471, 1073 |
| BlsI | GCNGC | 2 cut(s) | 472, 1074 |
| Bme1390I | CCNGG | 5 cut(s) | 28, 176, 354, 996, 1091 |
| Bme18I | GGWCC | 3 cut(s) | 121, 752, 982 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 148 |
| BmgT120I | GGNCC | 4 cut(s) | 121, 356, 752, 982 |
| BmiI | GGNNCC | 4 cut(s) | 586, 983, 984, 1123 |
| BmrFI | CCNGG | 5 cut(s) | 28, 176, 354, 996, 1091 |
| BmrI | ACTGGG | 1 cut(s) | 987 |
| BmsI | GCATC | 2 cut(s) | 511, 956 |
| BmtI | GCTAGC | 1 cut(s) | 216 |
| BmuI | ACTGGG | 1 cut(s) | 987 |
| BpiI | GAAGAC | 2 cut(s) | 147, 407 |
| BpmI | CTGGAG | 1 cut(s) | 1010 |
| BpuEI | CTTGAG | 1 cut(s) | 892 |
| BpuMI | CCSGG | 2 cut(s) | 28, 176 |
| BsaJI | CCNNGG | 7 cut(s) | 184, 288, 353, 538, 816, 928, 1059 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 109, 244, 623, 691, 873, 934 |
| Bse1I | ACTGG | 4 cut(s) | 852, 982, 1027, 1134 |
| Bse3DI | GCAATG | 1 cut(s) | 553 |
| BseBI | CCWGG | 3 cut(s) | 354, 996, 1091 |
| BseDI | CCNNGG | 7 cut(s) | 184, 288, 353, 538, 816, 928, 1059 |
| BseGI | GGATG | 1 cut(s) | 768 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 109, 244, 623, 691, 873, 934 |
| BseMI | GCAATG | 1 cut(s) | 553 |
| BseMII | CTCAG | 1 cut(s) | 585 |
| BseNI | ACTGG | 4 cut(s) | 852, 982, 1027, 1134 |
| BseRI | GAGGAG | 1 cut(s) | 173 |
| BseSI | GKGCMC | 1 cut(s) | 587 |
| BseX3I | CGGCCG | 2 cut(s) | 91, 111 |
| BseXI | GCAGC | 2 cut(s) | 457, 1084 |
| BsgI | GTGCAG | 1 cut(s) | 456 |
| Bsh1236I | CGCG | 4 cut(s) | 79, 126, 299, 301 |
| Bsh1285I | CGRYCG | 3 cut(s) | 94, 114, 305 |
| BshFI | GGCC | 4 cut(s) | 93, 113, 229, 358 |
| BshNI | GGYRCC | 2 cut(s) | 584, 1121 |
| BsiEI | CGRYCG | 3 cut(s) | 94, 114, 305 |
| BsiHKAI | GWGCWC | 1 cut(s) | 183 |
| BsiSI | CCGG | 3 cut(s) | 28, 176, 692 |
| BslFI | GGGAC | 3 cut(s) | 101, 123, 995 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 109, 244, 623, 691, 873, 934 |
| BsmAI | GTCTC | 3 cut(s) | 99, 724, 1002 |
| BsmBI | CGTCTC | 1 cut(s) | 1002 |
| BsmFI | GGGAC | 3 cut(s) | 101, 123, 995 |
| BsnI | GGCC | 4 cut(s) | 93, 113, 229, 358 |
| Bsp1286I | GDGCHC | 2 cut(s) | 183, 587 |
| Bsp143I | GATC | 4 cut(s) | 70, 192, 294, 898 |
| Bsp19I | CCATGG | 3 cut(s) | 816, 928, 1059 |
| BspACI | CCGC | 7 cut(s) | 10, 124, 235, 271, 301, 617, 773 |
| BspANI | GGCC | 4 cut(s) | 93, 113, 229, 358 |
| BspCNI | CTCAG | 1 cut(s) | 584 |
| BspFNI | CGCG | 4 cut(s) | 79, 126, 299, 301 |
| BspLI | GGNNCC | 4 cut(s) | 586, 983, 984, 1123 |
| BspOI | GCTAGC | 1 cut(s) | 216 |
| BspPI | GGATC | 1 cut(s) | 78 |
| BspT107I | GGYRCC | 2 cut(s) | 584, 1121 |
| BsrDI | GCAATG | 1 cut(s) | 553 |
| BsrI | ACTGG | 4 cut(s) | 852, 982, 1027, 1134 |
| BssECI | CCNNGG | 7 cut(s) | 184, 288, 353, 538, 816, 928, 1059 |
| BssMI | GATC | 4 cut(s) | 70, 192, 294, 898 |
| BssT1I | CCWWGG | 5 cut(s) | 288, 538, 816, 928, 1059 |
| Bst2UI | CCWGG | 3 cut(s) | 354, 996, 1091 |
| Bst4CI | ACNGT | 5 cut(s) | 137, 317, 868, 943, 1021 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 635 |
| BstDEI | CTNAG | 1 cut(s) | 571 |
| BstDSI | CCRYGG | 3 cut(s) | 816, 928, 1059 |
| BstF5I | GGATG | 1 cut(s) | 768 |
| BstFNI | CGCG | 4 cut(s) | 79, 126, 299, 301 |
| BstHHI | GCGC | 2 cut(s) | 79, 301 |
| BstKTI | GATC | 4 cut(s) | 73, 195, 297, 901 |
| BstMAI | GTCTC | 3 cut(s) | 99, 724, 1002 |
| BstMBI | GATC | 4 cut(s) | 70, 192, 294, 898 |
| BstMCI | CGRYCG | 3 cut(s) | 94, 114, 305 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 178, 635, 1091, 1113 |
| BstNI | CCWGG | 3 cut(s) | 354, 996, 1091 |
| BstSCI | CCNGG | 5 cut(s) | 26, 174, 352, 994, 1089 |
| BstSLI | GKGCMC | 1 cut(s) | 587 |
| BstUI | CGCG | 4 cut(s) | 79, 126, 299, 301 |
| BstV1I | GCAGC | 2 cut(s) | 457, 1084 |
| BstV2I | GAAGAC | 2 cut(s) | 147, 407 |
| BstZI | CGGCCG | 2 cut(s) | 91, 111 |
| BsuRI | GGCC | 4 cut(s) | 93, 113, 229, 358 |
| BtgI | CCRYGG | 3 cut(s) | 816, 928, 1059 |
| BtsCI | GGATG | 1 cut(s) | 768 |
| BtsI | GCAGTG | 1 cut(s) | 914 |
| BtsIMutI | CAGTG | 2 cut(s) | 322, 914 |
| CfoI | GCGC | 2 cut(s) | 79, 301 |
| Cfr13I | GGNCC | 4 cut(s) | 121, 356, 752, 982 |
| CseI | GACGC | 1 cut(s) | 115 |
| Csp6I | GTAC | 1 cut(s) | 313 |
| CviAII | CATG | 5 cut(s) | 488, 817, 896, 929, 1060 |
| CviQI | GTAC | 1 cut(s) | 313 |
| DdeI | CTNAG | 1 cut(s) | 571 |
| DpnI | GATC | 4 cut(s) | 72, 194, 296, 900 |
| DpnII | GATC | 4 cut(s) | 70, 192, 294, 898 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 95 |
| DriI | GACNNNNNGTC | 1 cut(s) | 148 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 95 |
| EaeI | YGGCCR | 2 cut(s) | 91, 111 |
| EagI | CGGCCG | 2 cut(s) | 91, 111 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 148 |
| Ecl136II | GAGCTC | 1 cut(s) | 181 |
| EclXI | CGGCCG | 2 cut(s) | 91, 111 |
| Eco130I | CCWWGG | 5 cut(s) | 288, 538, 816, 928, 1059 |
| Eco24I | GRGCYC | 1 cut(s) | 183 |
| Eco32I | GATATC | 1 cut(s) | 283 |
| Eco47I | GGWCC | 3 cut(s) | 121, 752, 982 |
| Eco52I | CGGCCG | 2 cut(s) | 91, 111 |
| Eco53kI | GAGCTC | 1 cut(s) | 181 |
| EcoICRI | GAGCTC | 1 cut(s) | 181 |
| EcoO109I | RGGNCCY | 1 cut(s) | 982 |
| EcoRII | CCWGG | 3 cut(s) | 352, 994, 1089 |
| EcoRV | GATATC | 1 cut(s) | 283 |
| EcoT14I | CCWWGG | 5 cut(s) | 288, 538, 816, 928, 1059 |
| EcoT38I | GRGCYC | 1 cut(s) | 183 |
| ErhI | CCWWGG | 5 cut(s) | 288, 538, 816, 928, 1059 |
| Esp3I | CGTCTC | 1 cut(s) | 1002 |
| FaeI | CATG | 5 cut(s) | 491, 820, 899, 932, 1063 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 535, 567 |
| FaqI | GGGAC | 3 cut(s) | 101, 123, 995 |
| FatI | CATG | 5 cut(s) | 487, 816, 895, 928, 1059 |
| FauI | CCCGC | 1 cut(s) | 780 |
| FbaI | TGATCA | 1 cut(s) | 898 |
| FblI | GTMKAC | 1 cut(s) | 650 |
| Fnu4HI | GCNGC | 2 cut(s) | 471, 1073 |
| FokI | GGATG | 1 cut(s) | 775 |
| FriOI | GRGCYC | 1 cut(s) | 183 |
| Fsp4HI | GCNGC | 2 cut(s) | 471, 1073 |
| FspBI | CTAG | 2 cut(s) | 213, 425 |
| GlaI | GCGC | 2 cut(s) | 78, 300 |
| GluI | GCNGC | 2 cut(s) | 471, 1073 |
| GsuI | CTGGAG | 1 cut(s) | 1010 |
| HaeIII | GGCC | 4 cut(s) | 93, 113, 229, 358 |
| HapII | CCGG | 3 cut(s) | 28, 176, 692 |
| HgaI | GACGC | 1 cut(s) | 115 |
| HhaI | GCGC | 2 cut(s) | 79, 301 |
| Hin1II | CATG | 5 cut(s) | 491, 820, 899, 932, 1063 |
| Hin6I | GCGC | 2 cut(s) | 77, 299 |
| HinP1I | GCGC | 2 cut(s) | 77, 299 |
| HinfI | GANTC | 3 cut(s) | 96, 107, 143 |
| HpaII | CCGG | 3 cut(s) | 28, 176, 692 |
| HphI | GGTGA | 5 cut(s) | 224, 277, 319, 436, 1055 |
| Hpy166II | GTNNAC | 1 cut(s) | 651 |
| Hpy188I | TCNGA | 3 cut(s) | 104, 574, 793 |
| Hpy188III | TCNNGA | 4 cut(s) | 140, 747, 871, 1033 |
| Hpy8I | GTNNAC | 1 cut(s) | 651 |
| Hpy99I | CGWCG | 6 cut(s) | 68, 131, 151, 154, 221, 660 |
| HpyAV | CCTTC | 6 cut(s) | 318, 340, 345, 746, 753, 1096 |
| HpyCH4III | ACNGT | 5 cut(s) | 137, 317, 868, 943, 1021 |
| HpyCH4IV | ACGT | 2 cut(s) | 243, 410 |
| HpyCH4V | TGCA | 7 cut(s) | 267, 473, 629, 638, 665, 907, 974 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 178, 635, 1091, 1113 |
| HpyF3I | CTNAG | 1 cut(s) | 571 |
| HpySE526I | ACGT | 2 cut(s) | 243, 410 |
| Hsp92II | CATG | 5 cut(s) | 491, 820, 899, 932, 1063 |
| HspAI | GCGC | 2 cut(s) | 77, 299 |
| KflI | GGGWCCC | 1 cut(s) | 982 |
| Ksp22I | TGATCA | 1 cut(s) | 898 |
| Kzo9I | GATC | 4 cut(s) | 70, 192, 294, 898 |
| LmnI | GCTCC | 4 cut(s) | 177, 178, 186, 889 |
| Lsp1109I | GCAGC | 2 cut(s) | 457, 1084 |
| LweI | GCATC | 2 cut(s) | 511, 956 |
| MaeI | CTAG | 2 cut(s) | 213, 425 |
| MaeII | ACGT | 2 cut(s) | 243, 410 |
| MaeIII | GTNAC | 2 cut(s) | 854, 937 |
| MalI | GATC | 4 cut(s) | 72, 194, 296, 900 |
| MboI | GATC | 4 cut(s) | 70, 192, 294, 898 |
| MboII | GAAGA | 4 cut(s) | 147, 412, 847, 1025 |
| MhlI | GDGCHC | 2 cut(s) | 183, 587 |
| MluCI | AATT | 8 cut(s) | 32, 53, 563, 589, 728, 778, 798, 922 |
| MlyI | GAGTC | 3 cut(s) | 101, 105, 137 |
| MmeI | TCCRAC | 1 cut(s) | 99 |
| MnlI | CCTC | 9 cut(s) | 61, 194, 202, 240, 270, 415, 743, 867, 992 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1020 |
| MseI | TTAA | 3 cut(s) | 345, 566, 777 |
| MslI | CAYNNNNRTG | 1 cut(s) | 624 |
| MspA1I | CMGCKG | 1 cut(s) | 967 |
| MspI | CCGG | 3 cut(s) | 28, 176, 692 |
| MspR9I | CCNGG | 5 cut(s) | 28, 176, 354, 996, 1091 |
| MvaI | CCWGG | 3 cut(s) | 354, 996, 1091 |
| MvnI | CGCG | 4 cut(s) | 79, 126, 299, 301 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 178, 635, 1091, 1113 |
| NciI | CCSGG | 2 cut(s) | 28, 176 |
| NcoI | CCATGG | 3 cut(s) | 816, 928, 1059 |
| NdeII | GATC | 4 cut(s) | 70, 192, 294, 898 |
| NheI | GCTAGC | 1 cut(s) | 212 |
| NlaIII | CATG | 5 cut(s) | 491, 820, 899, 932, 1063 |
| NlaIV | GGNNCC | 4 cut(s) | 586, 983, 984, 1123 |
| NmeAIII | GCCGAG | 4 cut(s) | 89, 119, 139, 165 |
| NmuCI | GTSAC | 1 cut(s) | 937 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 96, 155, 864 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1020 |
| PflFI | GACNNNGTC | 1 cut(s) | 125 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 244 |
| PfoI | TCCNGGA | 2 cut(s) | 26, 174 |
| PkrI | GCNGC | 2 cut(s) | 472, 1074 |
| PleI | GAGTC | 3 cut(s) | 101, 104, 137 |
| PpsI | GAGTC | 3 cut(s) | 101, 104, 137 |
| PpuMI | RGGWCCY | 1 cut(s) | 982 |
| Psp124BI | GAGCTC | 1 cut(s) | 183 |
| Psp1406I | AACGTT | 1 cut(s) | 410 |
| Psp5II | RGGWCCY | 1 cut(s) | 982 |
| Psp6I | CCWGG | 3 cut(s) | 352, 994, 1089 |
| PspGI | CCWGG | 3 cut(s) | 352, 994, 1089 |
| PspN4I | GGNNCC | 4 cut(s) | 586, 983, 984, 1123 |
| PspPI | GGNCC | 4 cut(s) | 121, 356, 752, 982 |
| PspPPI | RGGWCCY | 1 cut(s) | 982 |
| PsyI | GACNNNGTC | 1 cut(s) | 125 |
| PvuII | CAGCTG | 1 cut(s) | 967 |
| RsaI | GTAC | 1 cut(s) | 314 |
| RsaNI | GTAC | 1 cut(s) | 313 |
| RseI | CAYNNNNRTG | 1 cut(s) | 624 |
| SacI | GAGCTC | 1 cut(s) | 183 |
| SaqAI | TTAA | 3 cut(s) | 345, 566, 777 |
| SatI | GCNGC | 2 cut(s) | 471, 1073 |
| Sau3AI | GATC | 4 cut(s) | 70, 192, 294, 898 |
| Sau96I | GGNCC | 4 cut(s) | 121, 356, 752, 982 |
| SchI | GAGTC | 3 cut(s) | 101, 105, 137 |
| ScrFI | CCNGG | 5 cut(s) | 28, 176, 354, 996, 1091 |
| SduI | GDGCHC | 2 cut(s) | 183, 587 |
| SfaNI | GCATC | 2 cut(s) | 511, 956 |
| SinI | GGWCC | 3 cut(s) | 121, 752, 982 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 624 |
| SmlI | CTYRAG | 1 cut(s) | 871 |
| SmoI | CTYRAG | 1 cut(s) | 871 |
| Sse9I | AATT | 8 cut(s) | 32, 53, 563, 589, 728, 778, 798, 922 |
| SsiI | CCGC | 7 cut(s) | 10, 124, 235, 271, 301, 617, 773 |
| SspMI | CTAG | 2 cut(s) | 213, 425 |
| SstI | GAGCTC | 1 cut(s) | 183 |
| StyD4I | CCNGG | 5 cut(s) | 26, 174, 352, 994, 1089 |
| StyI | CCWWGG | 5 cut(s) | 288, 538, 816, 928, 1059 |
| TaaI | ACNGT | 5 cut(s) | 137, 317, 868, 943, 1021 |
| TaiI | ACGT | 2 cut(s) | 246, 413 |
| TasI | AATT | 8 cut(s) | 32, 53, 563, 589, 728, 778, 798, 922 |
| Tru1I | TTAA | 3 cut(s) | 345, 566, 777 |
| Tru9I | TTAA | 3 cut(s) | 345, 566, 777 |
| TscAI | CASTG | 2 cut(s) | 322, 914 |
| TseFI | GTSAC | 1 cut(s) | 937 |
| TseI | GCWGC | 2 cut(s) | 470, 1072 |
| Tsp45I | GTSAC | 1 cut(s) | 937 |
| TspDTI | ATGAA | 1 cut(s) | 810 |
| TspGWI | ACGGA | 2 cut(s) | 214, 490 |
| TspRI | CASTG | 2 cut(s) | 322, 914 |
| Tth111I | GACNNNGTC | 1 cut(s) | 125 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 244 |
| VpaK11BI | GGWCC | 3 cut(s) | 121, 752, 982 |
| XapI | RAATTY | 3 cut(s) | 32, 728, 922 |
| XmiI | GTMKAC | 1 cut(s) | 650 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1020 |
| XspI | CTAG | 2 cut(s) | 213, 425 |