Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0002530

Physical Location & Seq

Genomic Coordinates Reverse (-)

13565167 .. 13577951

Gene Structure 12785 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G216500.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2436 bp

ATGGAAGACATGGAGGAAATGGACGAAACCGAAGCTCTACCTCAGGTGTACATGGCGTGCATTCTACACGGTCAAAGAGTTGGAATTTCTTATTACGACTCCAGTATTCGCCAACTTCACGTGCTGGAAGTTTGGGAAGATGGCAGCACAGACTTCCCCCTAATTGATTTGGTAAAATATCAAGCTAGGCCCCTTATCATTTACGCAAGCACTAAAAGTGAAGAATCCTTCTTGTCTGCTTTACAACGAAGTGATGGAATGACTGAGGCCTTTACGGTGAAGCTTGTGAAAAGTTCCATATTTAGCTATGAGCAAGCATGGCACAGACTGATATACCTTCGAGTCACAGGAATGGATGATGGGTTAAACATCAAGGAGAGAATTTGTTATTTGAGTTCTATGATGGACATGGGAAGTGATATCCAAGTTCGTACCAGTGGAGGTCTTCTTGCCATATTAGAGAATGAAAGGGTGGTAGATACACTTGAACAAATGGAAAGCGGGAATGCATCAATTGCAATCGATTCTGTTATAGAAGTTTCACTAAACAATTTCCTTAAACTTGATGCAGCAGCTCATGAGGCATTGCAGATATTCCAAACAGATAAGCATCCAAGCCATATGGGCATTGGTAGAGCAAAAGAAGGGTTCTCTGTATTTGGCATGATGAATAAGTGTGTAACGCCCATGGGGAGACGTCTCTTGAGAAGCTGGTTCTTAAGGCCAATACTTGACCTAGAAACTTTGAACAGTCGTCTCAATGCCATATCATTCTTTCTTTCTTCTGAAGAACTGATAAATTCTTTACGTGGAACTCTGAAATCTGTGAAGGACATTCCTCACATACTCAAGAAATTTAACTCCCCGAGCTCAATATGTACCAGTGGCGATTGGACAGCTTTTTTGAAGAGTGTTTGTTCACTTTTGCATGTGAACAAGATATTTGAAGTAGGTGTTTCTGAGAGTCTTCAGGAGCACGCAAAGTACTTGAATTTGGACATTGTTGAGAAGGCTGCTTCATGCATTACAACTGAACTGGCTTATGTATATGAATTGGTAATTGGTGTTCTAGATGTAAGTAGAAGTAAGGAGAAGGGATATGAGACGATTGTAAAAGATGATTTCTGTGATGAGTTAGATGAGCTAAGGCAAATATATGAGGAATTGCCTGAATTTCTGGAAGAGGTGTCACAGATGGAACTTGGAAGACTGCCTCAGCTGTACAAAGAAAAGTTTGTTCCTTGTATTGTTTATATACATCAGATAGGATACTTGATGTGCATTTTTGAAGAAAAACTTGATGAAGCTACTCTGGAGAAAGTTCAAGATTTTGAATTTGCTTTCTCTGATGCAGAAGGAGAAACGAAAAGGTTCTTTTATCATACAGCAAAGACACGAGAGTTGGACAATTTACTGGGAGATATCTATCATAAAATACTAGATATGGAGAGGGCGATTACTCGAGATTTGGTGTCACATATACTTCTATTTTCAGAACACCTACTTAAGGCTGTAAATTTTGCCGCTGAACTTGATTGTTTTTTGTCGTTGGCACTGGTTTCTCGTCAAAGCAATTATGTAAGGCCTACTTTGACTATGGATTGCTTGATTGATATACAAAATGGAAGACATGTTTTGCAGGAAATGACTGTAGACACCTTTGTTCCCAATGATACAATGATTCAAAATGAGGGAAGAATTAATATAATCACCGGTCCTAACTATTCAGGGAAAAGCATCTACATAAAGCAGGTAGCTTTAATTGTTTTCCTGTCCCACATTGGAAGTTTTGTACCAGCAGATGCTGCAACTATTGGTTTGACAGATAGAATATTCTGCGCAATGGGAAGCAAGCTCATGAATGCCGAAAAGTCAACATTTATGATTGATCTGCATCAAGTAGGGATGATGCTAAGGCAGGCAACTTCAAGGTCTTTGTGCCTATTGGATGAATTTGGTAAAGGTACTCTTACAGAAGATGGCGTCGGTCTGCTTGGTGGAACCATAAACTACTTGGTCTCACATGACGACCCTCCAAAGGTTCTGGTGTGTACTCATTTGACTGAGCTATTCAGTGAGAGTTGTTTACCTAAATCCAAGAAGATCGAATTTTACACCATGAGTGTGCTGAGACCTGACAACTCTACAGATATCGAGGATATTGTATTTCTGTATAGGCTAGTTCCTGGGCATGCCCTTCTAAGCTATGGTCTGCATTGTGCGCTACTTGCTGGTGTCCCAGAGGAAGTTATTAAGAGAGCAGCATTTATATTGGAAGCTCTTGGAAACAATGAACACGTTGAGCGATTGTGCAATGAGAATGTATCAGCTCAGGATCAGCAATACCAGAATGTGGTGGACAAGATGTTGGCATTTGATTTTCACAAAGGTGATATAGGTCTGTTTTTTCAGGGCTTATTTTCAGCTGAGTCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000228 GO:0000280 GO:0000710 GO:0000712 GO:0000793 GO:0000794 GO:0000795 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003824 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006281 GO:0006298 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007127 GO:0007129 GO:0007131 GO:0008094 GO:0008150 GO:0008152 GO:0009987 GO:0010777 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022402 GO:0022414 GO:0022607 GO:0030983 GO:0031974 GO:0031981 GO:0033554 GO:0034641 GO:0035825 GO:0042623 GO:0043073 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0045132 GO:0045143 GO:0046483 GO:0048285 GO:0050896 GO:0051026 GO:0051276 GO:0051304 GO:0051307 GO:0051321 GO:0051716 GO:0061982 GO:0070013 GO:0070192 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0098813 GO:0099086 GO:0140013 GO:1901360 GO:1901363 GO:1903046

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MutS_III MutS_IV MutS_V

Protein Analysis

812

Amino Acids

91.58

Weight (kDa)

4.96

Isoelectric Point (pI)

41.09

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002530)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G20475 AT3G20475 AT3G20475
fragaria_vesca	FvH4_3g23000 FvH4_3g23000 FvH4_3g23000 FvH4_3g23000 FvH4_3g23000 FvH4_3g23000 FvH4_3g23000 FvH4_3g23000 FvH4_3g23000 FvH4_3g23000 FvH4_3g23000 FvH4_3g23000 FvH4_3g23000 FvH4_3g23000 FvH4_3g23000 FvH4_3g23000
malus_domestica	MD11G1214700.v1.1
prunus_persica	Prupe.4G216500_v2.0.a1 Prupe.4G216500_v2.0.a1 Prupe.4G216500_v2.0.a1 Prupe.4G216500_v2.0.a1 Prupe.4G216500_v2.0.a1 Prupe.4G216500_v2.0.a1 Prupe.4G216500_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0040391 RchiOBHm_Chr5g0040451
rosa_laevigata	RLG00000033976
rosa_multiflora	Rmu_sc0004516.1_g000007
rosa_roxburghii	Rroxscaffold_1G00040210 Rroxscaffold_1G00040250 Rroxscaffold_1G00040300 Rroxscaffold_1G00040940
rosa_rugosa	Rorug05G0184700
rosa_samantha	Rh5AG272000 Rh5BG275900 Rh5CG308000 Rh5DG284100
rosa_wichuraiana	Rw5G025430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	700
Acc16I	TGCGCA	1 cut(s)	1840
Acc36I	ACCTGC	1 cut(s)	1741
AccB7I	CCANNNNNTGG	1 cut(s)	2353
AccI	GTMKAC	1 cut(s)	1653
AciI	CCGC	2 cut(s)	501, 1524
AclWI	GGATC	1 cut(s)	2343
AcuI	CTGAAG	2 cut(s)	807, 953
AcvI	CACGTG	1 cut(s)	121
AcyI	GRCGYC	2 cut(s)	697, 1983
AfaI	GTAC	8 cut(s)	50, 433, 880, 986, 1223, 1794, 1966, 2053
AfiI	CCNNNNNNNGG	3 cut(s)	1507, 2038, 2353
AflII	CTTAAG	2 cut(s)	718, 1505
AflIII	ACRYGT	2 cut(s)	1630, 2296
AgeI	ACCGGT	1 cut(s)	1712
AjnI	CCWGG	1 cut(s)	2185
AjuI	GAANNNNNNNTTGG	2 cut(s)	1044, 1076
AleI	CACNNNNGTG	1 cut(s)	2388
Alw21I	GWGCWC	2 cut(s)	872, 978
Alw26I	GTCTC	6 cut(s)	688, 704, 761, 1097, 2023, 2125
AlwI	GGATC	1 cut(s)	2343
AlwNI	CAGNNNCTG	1 cut(s)	1805
Ama87I	CYCGRG	2 cut(s)	865, 1461
AoxI	GGCC	4 cut(s)	188, 267, 722, 1583
ApeKI	GCWGC	6 cut(s)	144, 569, 572, 1013, 1805, 2261
ArsI	GACNNNNNNTTYG	2 cut(s)	886, 918
AseI	ATTAAT	1 cut(s)	1701
AsiGI	ACCGGT	1 cut(s)	1712
Asp700I	GAANNNNTTC	1 cut(s)	1370
AspLEI	GCGC	2 cut(s)	1841, 2224
AspS9I	GGNCC	2 cut(s)	189, 1715
AsuHPI	GGTGA	3 cut(s)	289, 1702, 2402
AvaI	CYCGRG	2 cut(s)	865, 1461
AvaII	GGWCC	1 cut(s)	1715
AxyI	CCTNAGG	1 cut(s)	42
BanII	GRGCYC	1 cut(s)	872
BauI	CACGAG	1 cut(s)	1395
BbrPI	CACGTG	1 cut(s)	121
BbsI	GAAGAC	5 cut(s)	12, 437, 959, 1213, 1633
Bbv12I	GWGCWC	2 cut(s)	872, 978
BbvCI	CCTCAGC	1 cut(s)	1215
BbvI	GCAGC	6 cut(s)	156, 581, 584, 1000, 1792, 2273
BccI	CCATC	6 cut(s)	134, 248, 353, 397, 1189, 1973
BciT130I	CCWGG	1 cut(s)	2187
BciVI	GTATCC	1 cut(s)	1262
BcoDI	GTCTC	6 cut(s)	688, 704, 761, 1097, 2023, 2125
BfaI	CTAG	5 cut(s)	186, 737, 1070, 1439, 2180
BfmI	CTRYAG	2 cut(s)	1650, 2145
BfrI	CTTAAG	2 cut(s)	718, 1505
BfuAI	ACCTGC	1 cut(s)	1741
BfuI	GTATCC	1 cut(s)	1262
BglI	GCCNNNNNGGC	1 cut(s)	624
BisI	GCNGC	7 cut(s)	145, 570, 573, 1014, 1524, 1806, 2262
BlsI	GCNGC	7 cut(s)	146, 571, 574, 1015, 1525, 1807, 2263
BmcAI	AGTACT	1 cut(s)	986
Bme1390I	CCNGG	1 cut(s)	2187
Bme18I	GGWCC	1 cut(s)	1715
BmeT110I	CYCGRG	2 cut(s)	865, 1461
BmgT120I	GGNCC	2 cut(s)	189, 1715
BmiI	GGNNCC	2 cut(s)	191, 2002
BmrFI	CCNGG	1 cut(s)	2187
BmrI	ACTGGG	1 cut(s)	1424
BmsI	GCATC	8 cut(s)	518, 556, 619, 1339, 1746, 1792, 1899, 1903
BmuI	ACTGGG	1 cut(s)	1424
BpiI	GAAGAC	5 cut(s)	12, 437, 959, 1213, 1633
BpmI	CTGGAG	2 cut(s)	85, 1334
Bpu10I	CCTNAGC	4 cut(s)	1145, 1215, 1913, 2331
BpuEI	CTTGAG	2 cut(s)	724, 833
Bsa29I	ATCGAT	1 cut(s)	522
BsaAI	YACGTR	2 cut(s)	121, 809
BsaBI	GATNNNNATC	3 cut(s)	609, 1425, 1893
BsaHI	GRCGYC	2 cut(s)	697, 1983
BsaI	GGTCTC	2 cut(s)	2023, 2125
BsaJI	CCNNGG	2 cut(s)	687, 2186
BsaWI	WCCGGW	1 cut(s)	1712
Bsc4I	CCNNNNNNNGG	3 cut(s)	1507, 2038, 2353
Bse118I	RCCGGY	1 cut(s)	1712
Bse1I	ACTGG	6 cut(s)	102, 435, 882, 1041, 1419, 1560
Bse21I	CCTNAGG	1 cut(s)	42
Bse3DI	GCAATG	3 cut(s)	584, 1848, 2320
Bse8I	GATNNNNATC	3 cut(s)	609, 1425, 1893
BseBI	CCWGG	1 cut(s)	2187
BseCI	ATCGAT	1 cut(s)	522
BseDI	CCNNGG	2 cut(s)	687, 2186
BseGI	GGATG	4 cut(s)	361, 610, 1911, 1954
BseJI	GATNNNNATC	3 cut(s)	609, 1425, 1893
BseLI	CCNNNNNNNGG	3 cut(s)	1507, 2038, 2353
BseMI	GCAATG	3 cut(s)	584, 1848, 2320
BseMII	CTCAG	8 cut(s)	56, 255, 951, 1229, 2055, 2120, 2345, 2418
BseNI	ACTGG	6 cut(s)	102, 435, 882, 1041, 1419, 1560
BseXI	GCAGC	6 cut(s)	156, 581, 584, 1000, 1792, 2273
BshFI	GGCC	4 cut(s)	190, 269, 724, 1585
BshTI	ACCGGT	1 cut(s)	1712
BshVI	ATCGAT	1 cut(s)	522
BsiHKAI	GWGCWC	2 cut(s)	872, 978
BsiHKCI	CYCGRG	2 cut(s)	865, 1461
BsiSI	CCGG	1 cut(s)	1713
BslFI	GGGAC	2 cut(s)	1759, 2222
BslI	CCNNNNNNNGG	3 cut(s)	1507, 2038, 2353
BsmAI	GTCTC	6 cut(s)	688, 704, 761, 1097, 2023, 2125
BsmBI	CGTCTC	4 cut(s)	688, 704, 761, 1097
BsmFI	GGGAC	2 cut(s)	1759, 2222
BsmI	GAATGC	3 cut(s)	60, 511, 1867
BsnI	GGCC	4 cut(s)	190, 269, 724, 1585
Bso31I	GGTCTC	2 cut(s)	2023, 2125
BsoBI	CYCGRG	2 cut(s)	865, 1461
Bsp1286I	GDGCHC	2 cut(s)	872, 978
Bsp1407I	TGTACA	2 cut(s)	48, 1221
Bsp143I	GATC	3 cut(s)	1888, 2103, 2335
Bsp19I	CCATGG	1 cut(s)	687
BspACI	CCGC	2 cut(s)	501, 1524
BspANI	GGCC	4 cut(s)	190, 269, 724, 1585
BspCNI	CTCAG	8 cut(s)	55, 256, 952, 1228, 2056, 2121, 2344, 2419
BspDI	ATCGAT	1 cut(s)	522
BspHI	TCATGA	2 cut(s)	577, 1857
BspLI	GGNNCC	2 cut(s)	191, 2002
BspMI	ACCTGC	1 cut(s)	1741
BspPI	GGATC	1 cut(s)	2343
BspTI	CTTAAG	2 cut(s)	718, 1505
BspTNI	GGTCTC	2 cut(s)	2023, 2125
BsrDI	GCAATG	3 cut(s)	584, 1848, 2320
BsrFI	RCCGGY	1 cut(s)	1712
BsrGI	TGTACA	2 cut(s)	48, 1221
BsrI	ACTGG	6 cut(s)	102, 435, 882, 1041, 1419, 1560
BssAI	RCCGGY	1 cut(s)	1712
BssECI	CCNNGG	2 cut(s)	687, 2186
BssMI	GATC	3 cut(s)	1888, 2103, 2335
BssNI	GRCGYC	2 cut(s)	697, 1983
BssSI	CACGAG	1 cut(s)	1395
BssT1I	CCWWGG	1 cut(s)	687
Bst2BI	CACGAG	1 cut(s)	1395
Bst2UI	CCWGG	1 cut(s)	2187
Bst4CI	ACNGT	4 cut(s)	71, 277, 752, 1651
Bst6I	CTCTTC	2 cut(s)	902, 1176
BstACI	GRCGYC	2 cut(s)	697, 1983
BstAFI	CTTAAG	2 cut(s)	718, 1505
BstAPI	GCANNNNNTGC	2 cut(s)	515, 1805
BstAUI	TGTACA	2 cut(s)	48, 1221
BstBAI	YACGTR	2 cut(s)	121, 809
BstC8I	GCNNGC	7 cut(s)	58, 208, 315, 978, 1853, 1920, 2193
BstDSI	CCRYGG	1 cut(s)	687
BstENI	CCTNNNNNAGG	1 cut(s)	1505
BstF5I	GGATG	4 cut(s)	361, 610, 1911, 1954
BstHHI	GCGC	2 cut(s)	1841, 2224
BstKTI	GATC	3 cut(s)	1891, 2106, 2338
BstMAI	GTCTC	6 cut(s)	688, 704, 761, 1097, 2023, 2125
BstMBI	GATC	3 cut(s)	1888, 2103, 2335
BstMWI	GCNNNNNNNGC	7 cut(s)	319, 515, 581, 624, 1805, 2221, 2228
BstNI	CCWGG	1 cut(s)	2187
BstNSI	RCATGY	3 cut(s)	932, 1634, 2195
BstSCI	CCNGG	1 cut(s)	2185
BstSFI	CTRYAG	2 cut(s)	1650, 2145
BstV1I	GCAGC	6 cut(s)	156, 581, 584, 1000, 1792, 2273
BstV2I	GAAGAC	5 cut(s)	12, 437, 959, 1213, 1633
Bsu15I	ATCGAT	1 cut(s)	522
Bsu36I	CCTNAGG	1 cut(s)	42
BsuI	GTATCC	1 cut(s)	1262
BsuRI	GGCC	4 cut(s)	190, 269, 724, 1585
BsuTUI	ATCGAT	1 cut(s)	522
BtgI	CCRYGG	1 cut(s)	687
BtsCI	GGATG	4 cut(s)	361, 610, 1911, 1954
BtsIMutI	CAGTG	4 cut(s)	442, 889, 1553, 2080
BveI	ACCTGC	1 cut(s)	1741
Cac8I	GCNNGC	7 cut(s)	58, 208, 315, 978, 1853, 1920, 2193
CaiI	CAGNNNCTG	1 cut(s)	1805
CciI	TCATGA	2 cut(s)	577, 1857
CfoI	GCGC	2 cut(s)	1841, 2224
Cfr10I	RCCGGY	1 cut(s)	1712
Cfr13I	GGNCC	2 cut(s)	189, 1715
ClaI	ATCGAT	1 cut(s)	522
CseI	GACGC	1 cut(s)	1972
Csp6I	GTAC	8 cut(s)	49, 432, 879, 985, 1222, 1793, 1965, 2052
CspAI	ACCGGT	1 cut(s)	1712
CviQI	GTAC	8 cut(s)	49, 432, 879, 985, 1222, 1793, 1965, 2052
DpnI	GATC	3 cut(s)	1890, 2105, 2337
DpnII	GATC	3 cut(s)	1888, 2103, 2335
Eam1104I	CTCTTC	2 cut(s)	902, 1176
EarI	CTCTTC	2 cut(s)	902, 1176
Ecl136II	GAGCTC	1 cut(s)	870
Eco130I	CCWWGG	1 cut(s)	687
Eco147I	AGGCCT	2 cut(s)	269, 1585
Eco24I	GRGCYC	1 cut(s)	872
Eco31I	GGTCTC	2 cut(s)	2023, 2125
Eco32I	GATATC	3 cut(s)	421, 1423, 2152
Eco47I	GGWCC	1 cut(s)	1715
Eco53kI	GAGCTC	1 cut(s)	870
Eco57I	CTGAAG	2 cut(s)	807, 953
Eco72I	CACGTG	1 cut(s)	121
Eco81I	CCTNAGG	1 cut(s)	42
Eco88I	CYCGRG	2 cut(s)	865, 1461
EcoICRI	GAGCTC	1 cut(s)	870
EcoNI	CCTNNNNNAGG	1 cut(s)	1505
EcoO109I	RGGNCCY	1 cut(s)	189
EcoRII	CCWGG	1 cut(s)	2185
EcoRV	GATATC	3 cut(s)	421, 1423, 2152
EcoT14I	CCWWGG	1 cut(s)	687
EcoT22I	ATGCAT	2 cut(s)	511, 1025
EcoT38I	GRGCYC	1 cut(s)	872
ErhI	CCWWGG	1 cut(s)	687
Esp3I	CGTCTC	4 cut(s)	688, 704, 761, 1097
FalI	AAGNNNNNCTT	6 cut(s)	1281, 1313, 1573, 1605, 1953, 1985
FaqI	GGGAC	2 cut(s)	1759, 2222
FauI	CCCGC	1 cut(s)	494
FauNDI	CATATG	1 cut(s)	621
FblI	GTMKAC	1 cut(s)	1653
Fnu4HI	GCNGC	7 cut(s)	145, 570, 573, 1014, 1524, 1806, 2262
FokI	GGATG	4 cut(s)	368, 597, 1918, 1961
FriOI	GRGCYC	1 cut(s)	872
Fsp4HI	GCNGC	7 cut(s)	145, 570, 573, 1014, 1524, 1806, 2262
FspBI	CTAG	5 cut(s)	186, 737, 1070, 1439, 2180
FspI	TGCGCA	1 cut(s)	1840
GlaI	GCGC	2 cut(s)	1840, 2223
GluI	GCNGC	7 cut(s)	145, 570, 573, 1014, 1524, 1806, 2262
GsuI	CTGGAG	2 cut(s)	85, 1334
HaeIII	GGCC	4 cut(s)	190, 269, 724, 1585
HapII	CCGG	1 cut(s)	1713
HgaI	GACGC	1 cut(s)	1972
HhaI	GCGC	2 cut(s)	1841, 2224
Hin1I	GRCGYC	2 cut(s)	697, 1983
Hin6I	GCGC	2 cut(s)	1839, 2222
HinP1I	GCGC	2 cut(s)	1839, 2222
HincII	GTYRAC	1 cut(s)	1875
HindII	GTYRAC	1 cut(s)	1875
HindIII	AAGCTT	1 cut(s)	281
HinfI	GANTC	7 cut(s)	98, 224, 342, 524, 964, 1681, 2429
HpaII	CCGG	1 cut(s)	1713
HphI	GGTGA	3 cut(s)	289, 1702, 2402
Hpy166II	GTNNAC	8 cut(s)	49, 920, 934, 1654, 1875, 2052, 2087, 2359
Hpy188I	TCNGA	6 cut(s)	787, 819, 961, 1263, 1348, 1495
Hpy8I	GTNNAC	8 cut(s)	49, 920, 934, 1654, 1875, 2052, 2087, 2359
Hpy99I	CGWCG	1 cut(s)	1988
HpyAV	CCTTC	8 cut(s)	238, 347, 638, 823, 1003, 1087, 1349, 2207
HpyCH4III	ACNGT	4 cut(s)	71, 277, 752, 1651
HpyCH4IV	ACGT	4 cut(s)	120, 697, 808, 2298
HpyF10VI	GCNNNNNNNGC	7 cut(s)	319, 515, 581, 624, 1805, 2221, 2228
HpySE526I	ACGT	4 cut(s)	120, 697, 808, 2298
Hsp92I	GRCGYC	2 cut(s)	697, 1983
HspAI	GCGC	2 cut(s)	1839, 2222
Kzo9I	GATC	3 cut(s)	1888, 2103, 2335
LmnI	GCTCC	1 cut(s)	973
Lsp1109I	GCAGC	6 cut(s)	156, 581, 584, 1000, 1792, 2273
LweI	GCATC	8 cut(s)	518, 556, 619, 1339, 1746, 1792, 1899, 1903
MaeI	CTAG	5 cut(s)	186, 737, 1070, 1439, 2180
MaeII	ACGT	4 cut(s)	120, 697, 808, 2298
MaeIII	GTNAC	4 cut(s)	343, 679, 1188, 1473
MalI	GATC	3 cut(s)	1890, 2105, 2337
MboI	GATC	3 cut(s)	1888, 2103, 2335
MfeI	CAATTG	1 cut(s)	513
MhlI	GDGCHC	2 cut(s)	872, 978
MlyI	GAGTC	3 cut(s)	92, 351, 973
MmeI	TCCRAC	2 cut(s)	61, 1383
Mph1103I	ATGCAT	2 cut(s)	511, 1025
MroXI	GAANNNNTTC	1 cut(s)	1370
MseI	TTAA	8 cut(s)	365, 558, 719, 858, 1506, 1701, 1760, 2253
MslI	CAYNNNNRTG	3 cut(s)	350, 2123, 2388
MspA1I	CMGCKG	3 cut(s)	1219, 1526, 2426
MspCI	CTTAAG	2 cut(s)	718, 1505
MspI	CCGG	1 cut(s)	1713
MspR9I	CCNGG	1 cut(s)	2187
MunI	CAATTG	1 cut(s)	513
Mva1269I	GAATGC	3 cut(s)	60, 511, 1867
MvaI	CCWGG	1 cut(s)	2187
MwoI	GCNNNNNNNGC	7 cut(s)	319, 515, 581, 624, 1805, 2221, 2228
NcoI	CCATGG	1 cut(s)	687
NdeI	CATATG	1 cut(s)	621
NdeII	GATC	3 cut(s)	1888, 2103, 2335
NlaIV	GGNNCC	2 cut(s)	191, 2002
NmuCI	GTSAC	3 cut(s)	343, 1188, 1473
NsbI	TGCGCA	1 cut(s)	1840
NsiI	ATGCAT	2 cut(s)	511, 1025
NspI	RCATGY	3 cut(s)	932, 1634, 2195
OliI	CACNNNNGTG	1 cut(s)	2388
PaeI	GCATGC	1 cut(s)	2195
PaeR7I	CTCGAG	1 cut(s)	1461
PagI	TCATGA	2 cut(s)	577, 1857
PceI	AGGCCT	2 cut(s)	269, 1585
PciI	ACATGT	1 cut(s)	1630
PctI	GAATGC	3 cut(s)	60, 511, 1867
PdmI	GAANNNNTTC	1 cut(s)	1370
PfeI	GAWTC	3 cut(s)	224, 524, 1681
PflMI	CCANNNNNTGG	1 cut(s)	2353
PinAI	ACCGGT	1 cut(s)	1712
PkrI	GCNGC	7 cut(s)	146, 571, 574, 1015, 1525, 1807, 2263
PleI	GAGTC	3 cut(s)	92, 350, 972
PmaCI	CACGTG	1 cut(s)	121
PmlI	CACGTG	1 cut(s)	121
PpsI	GAGTC	3 cut(s)	92, 350, 972
Ppu21I	YACGTR	2 cut(s)	121, 809
PscI	ACATGT	1 cut(s)	1630
PshBI	ATTAAT	1 cut(s)	1701
Psp124BI	GAGCTC	1 cut(s)	872
Psp6I	CCWGG	1 cut(s)	2185
PspCI	CACGTG	1 cut(s)	121
PspGI	CCWGG	1 cut(s)	2185
PspN4I	GGNNCC	2 cut(s)	191, 2002
PspPI	GGNCC	2 cut(s)	189, 1715
PsrI	GAACNNNNNNTAC	2 cut(s)	1050, 1082
PstNI	CAGNNNCTG	1 cut(s)	1805
PvuII	CAGCTG	2 cut(s)	1219, 2426
RsaI	GTAC	8 cut(s)	50, 433, 880, 986, 1223, 1794, 1966, 2053
RsaNI	GTAC	8 cut(s)	49, 432, 879, 985, 1222, 1793, 1965, 2052
RseI	CAYNNNNRTG	3 cut(s)	350, 2123, 2388
SacI	GAGCTC	1 cut(s)	872
SaqAI	TTAA	8 cut(s)	365, 558, 719, 858, 1506, 1701, 1760, 2253
SatI	GCNGC	7 cut(s)	145, 570, 573, 1014, 1524, 1806, 2262
Sau3AI	GATC	3 cut(s)	1888, 2103, 2335
Sau96I	GGNCC	2 cut(s)	189, 1715
ScaI	AGTACT	1 cut(s)	986
SchI	GAGTC	3 cut(s)	92, 351, 973
ScrFI	CCNGG	1 cut(s)	2187
SduI	GDGCHC	2 cut(s)	872, 978
SfaNI	GCATC	8 cut(s)	518, 556, 619, 1339, 1746, 1792, 1899, 1903
SfcI	CTRYAG	2 cut(s)	1650, 2145
Sfr274I	CTCGAG	1 cut(s)	1461
SinI	GGWCC	1 cut(s)	1715
SlaI	CTCGAG	1 cut(s)	1461
SmiMI	CAYNNNNRTG	3 cut(s)	350, 2123, 2388
SmlI	CTYRAG	5 cut(s)	703, 718, 848, 1461, 1505
SmoI	CTYRAG	5 cut(s)	703, 718, 848, 1461, 1505
SphI	GCATGC	1 cut(s)	2195
SseBI	AGGCCT	2 cut(s)	269, 1585
SsiI	CCGC	2 cut(s)	501, 1524
SspI	AATATT	1 cut(s)	1833
SspMI	CTAG	5 cut(s)	186, 737, 1070, 1439, 2180
SstI	GAGCTC	1 cut(s)	872
StuI	AGGCCT	2 cut(s)	269, 1585
StyD4I	CCNGG	1 cut(s)	2185
StyI	CCWWGG	1 cut(s)	687
TaaI	ACNGT	4 cut(s)	71, 277, 752, 1651
TaiI	ACGT	4 cut(s)	123, 700, 811, 2301
TaqI	TCGA	5 cut(s)	340, 522, 1462, 2106, 2154
TaqII	GACCGA	1 cut(s)	1976
TatI	WGTACW	4 cut(s)	48, 984, 1221, 2051
TauI	GCSGC	1 cut(s)	1526
TfiI	GAWTC	3 cut(s)	224, 524, 1681
Tru1I	TTAA	8 cut(s)	365, 558, 719, 858, 1506, 1701, 1760, 2253
Tru9I	TTAA	8 cut(s)	365, 558, 719, 858, 1506, 1701, 1760, 2253
TscAI	CASTG	4 cut(s)	442, 889, 1560, 2080
TseFI	GTSAC	3 cut(s)	343, 1188, 1473
TseI	GCWGC	6 cut(s)	144, 569, 572, 1013, 1805, 2261
Tsp45I	GTSAC	3 cut(s)	343, 1188, 1473
TspDTI	ATGAA	8 cut(s)	480, 683, 1008, 1065, 1317, 1874, 1965, 2307
TspRI	CASTG	4 cut(s)	442, 889, 1560, 2080
Van91I	CCANNNNNTGG	1 cut(s)	2353
Vha464I	CTTAAG	2 cut(s)	718, 1505
VpaK11BI	GGWCC	1 cut(s)	1715
VspI	ATTAAT	1 cut(s)	1701
XagI	CCTNNNNNAGG	1 cut(s)	1505
XbaI	TCTAGA	1 cut(s)	1069
XceI	RCATGY	3 cut(s)	932, 1634, 2195
XcmI	CCANNNNNNNNNTGG	2 cut(s)	626, 2011
XhoI	CTCGAG	1 cut(s)	1461
XmiI	GTMKAC	1 cut(s)	1653
XmnI	GAANNNNTTC	1 cut(s)	1370
XspI	CTAG	5 cut(s)	186, 737, 1070, 1439, 2180
ZraI	GACGTC	1 cut(s)	698
ZrmI	AGTACT	1 cut(s)	986
Zsp2I	ATGCAT	2 cut(s)	511, 1025

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.