Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0010665

Physical Location & Seq

Genomic Coordinates Reverse (-)

14129501 .. 14135368

Gene Structure 5868 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G224600.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 918 bp

ATGTCAGACCTAGACAGGCAAATAGAGCAGCTCAAGAAGTGCGAGCCTCTCAAAGAGTCGGAGGTCAAGGCTCTCTGCCTCAAGGCCATGGAAATCCTCGTCGAAGAGAGCAACGTTCAGAGGGTCGATGCTCCTGTCACTATTTGCGGTGACATCCACGGGCAGTTTTATGACATGAAAGAGCTTTTCAAAGTAGGAGGTGATTGCCCAAAGACTAACTACTTGTTTCTTGGAGATTTTGTTGACAGAGGATTCTATTCCGTTGAGACATTTCTACTCCTACTTGCACTCAAGGTTAGATATCCAGATCGGATAACACTTATTAGAGGAAACCACGAGAGTCGTCAAATCACGCAGGTGTATGGATTCTATGATGAGTGTCTACGAAAGTATGGATCTGTCAATGTTTGGAGATATTGCACTGATATATTTGATTACCTAAGTTTGTCAGCTCTCATTGAGAATAAGATTTTTAGCGTACATGGTGGTCTCTCTCCTGCCATTTCAACTCTGGATCAGATACGAACAATTGACCGGAAGCAAGAAGTACCTCATGATGGTGCCATGTGTGACCTACTATGGTCAGATCCTGAAGATATTGTGGATGGTTGGGGTTTGAGTCCTCGTGGTGCTGGTTTCCTCTTTGGTGGCAGCGTTGTTTCTTCATTTAACCATGCAAACAACATTGACTATATATGTCGTGCCCATCAGTTGGTAATGGAAGGGTATAAATGGATGTTTAATAACCAGATAGTTACAGTCTGGTCAGCACCGAATTACTGTTACAGATGTGGTAATGTAGCTGCAATTCTTGAGCTGGATGAAAATCTTAATAAGCAGTTTCGTGTCTTTGATGCTGCGCCACAGGAATCAAGAGGCACGCCTGCCAAGAAACCTGCACCAGACTACTTTCTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004721 GO:0004722 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019538 GO:0036211 GO:0042578 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04922 map04922

Pfam Domains

Protein Families

Metallophos

Protein Analysis

306

Amino Acids

34.75

Weight (kDa)

5.24

Isoelectric Point (pI)

41.36

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010665)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G55260 AT5G55260
fragaria_vesca	FvH4_3g23620
malus_domestica	MD03G1192600.v1.1 MD11G1209100.v1.1
prunus_persica	Prupe.4G224600_v2.0.a1 Prupe.4G224600_v2.0.a1
pyrus_communis	pycom03g14490 pycom11g18400
rosa_chinensis	RchiOBHm_Chr5g0041641
rosa_laevigata	RLG00000034087
rosa_multiflora	Rmu_sc0000861.1_g000015 Rmu_sc0011648.1_g000007
rosa_roxburghii	Rroxscaffold_1G00038850
rosa_rugosa	Rorug05G0194400
rosa_samantha	Rh5AG279800 Rh5BG285200 Rh5CG317200 Rh5DG294000
rosa_wichuraiana	Rw5G026340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	346
Acc36I	ACCTGC	2 cut(s)	346, 904
AccB1I	GGYRCC	1 cut(s)	560
AccB7I	CCANNNNNTGG	1 cut(s)	712
AccI	GTMKAC	1 cut(s)	382
AciI	CCGC	1 cut(s)	147
AclI	AACGTT	1 cut(s)	114
AclWI	GGATC	3 cut(s)	403, 522, 581
AcuI	CTGAAG	1 cut(s)	612
AfaI	GTAC	2 cut(s)	480, 549
AfiI	CCNNNNNNNGG	2 cut(s)	557, 712
AgsI	TTSAA	2 cut(s)	190, 507
AleI	CACNNNNGTG	1 cut(s)	356
AluBI	AGCT	5 cut(s)	31, 184, 452, 803, 817
AluI	AGCT	5 cut(s)	31, 184, 452, 803, 817
Alw26I	GTCTC	2 cut(s)	260, 494
AlwI	GGATC	3 cut(s)	403, 522, 581
AlwNI	CAGNNNCTG	1 cut(s)	590
AoxI	GGCC	1 cut(s)	84
ApeKI	GCWGC	4 cut(s)	28, 651, 803, 857
AspLEI	GCGC	1 cut(s)	862
AsuHPI	GGTGA	2 cut(s)	161, 212
BaeGI	GKGCMC	1 cut(s)	706
BanI	GGYRCC	1 cut(s)	560
BauI	CACGAG	2 cut(s)	335, 624
BbvI	GCAGC	4 cut(s)	40, 663, 790, 844
BccI	CCATC	3 cut(s)	551, 599, 714
BcoDI	GTCTC	2 cut(s)	260, 494
BfaI	CTAG	1 cut(s)	11
BfuAI	ACCTGC	2 cut(s)	346, 904
BisI	GCNGC	4 cut(s)	29, 652, 804, 858
BlsI	GCNGC	4 cut(s)	30, 653, 805, 859
BmiI	GGNNCC	1 cut(s)	562
BmsI	GCATC	2 cut(s)	118, 844
BpuEI	CTTGAG	4 cut(s)	17, 65, 275, 833
BsaBI	GATNNNNATC	1 cut(s)	825
BsaI	GGTCTC	1 cut(s)	494
BsaJI	CCNNGG	2 cut(s)	87, 157
BsaWI	WCCGGW	1 cut(s)	534
BsaXI	ACNNNNNCTCC	2 cut(s)	225, 255
Bsc4I	CCNNNNNNNGG	2 cut(s)	557, 712
Bse8I	GATNNNNATC	1 cut(s)	825
BseDI	CCNNGG	2 cut(s)	87, 157
BseGI	GGATG	4 cut(s)	153, 610, 741, 826
BseJI	GATNNNNATC	1 cut(s)	825
BseLI	CCNNNNNNNGG	2 cut(s)	557, 712
BseSI	GKGCMC	1 cut(s)	706
BseXI	GCAGC	4 cut(s)	40, 663, 790, 844
BsgI	GTGCAG	1 cut(s)	882
BshFI	GGCC	1 cut(s)	86
BshNI	GGYRCC	1 cut(s)	560
BsiSI	CCGG	1 cut(s)	535
BslI	CCNNNNNNNGG	2 cut(s)	557, 712
BsmAI	GTCTC	2 cut(s)	260, 494
BsnI	GGCC	1 cut(s)	86
Bso31I	GGTCTC	1 cut(s)	494
Bsp1286I	GDGCHC	1 cut(s)	706
Bsp143I	GATC	4 cut(s)	307, 395, 514, 586
Bsp19I	CCATGG	1 cut(s)	87
BspACI	CCGC	1 cut(s)	147
BspANI	GGCC	1 cut(s)	86
BspHI	TCATGA	1 cut(s)	553
BspLI	GGNNCC	1 cut(s)	562
BspMI	ACCTGC	2 cut(s)	346, 904
BspPI	GGATC	3 cut(s)	403, 522, 581
BspT107I	GGYRCC	1 cut(s)	560
BspTNI	GGTCTC	1 cut(s)	494
BssECI	CCNNGG	2 cut(s)	87, 157
BssMI	GATC	4 cut(s)	307, 395, 514, 586
BssSI	CACGAG	2 cut(s)	335, 624
BssT1I	CCWWGG	1 cut(s)	87
Bst2BI	CACGAG	2 cut(s)	335, 624
Bst4CI	ACNGT	2 cut(s)	760, 782
Bst6I	CTCTTC	1 cut(s)	99
BstC8I	GCNNGC	3 cut(s)	44, 881, 885
BstDEI	CTNAG	1 cut(s)	440
BstDSI	CCRYGG	2 cut(s)	87, 157
BstF5I	GGATG	4 cut(s)	153, 610, 741, 826
BstHHI	GCGC	1 cut(s)	862
BstKTI	GATC	4 cut(s)	310, 398, 517, 589
BstMAI	GTCTC	2 cut(s)	260, 494
BstMBI	GATC	4 cut(s)	307, 395, 514, 586
BstMWI	GCNNNNNNNGC	1 cut(s)	25
BstSLI	GKGCMC	1 cut(s)	706
BstV1I	GCAGC	4 cut(s)	40, 663, 790, 844
BstX2I	RGATCY	2 cut(s)	395, 586
BstYI	RGATCY	2 cut(s)	395, 586
BsuRI	GGCC	1 cut(s)	86
BtgI	CCRYGG	2 cut(s)	87, 157
BtsCI	GGATG	4 cut(s)	153, 610, 741, 826
BtsIMutI	CAGTG	1 cut(s)	420
BveI	ACCTGC	2 cut(s)	346, 904
Cac8I	GCNNGC	3 cut(s)	44, 881, 885
CaiI	CAGNNNCTG	1 cut(s)	590
CciI	TCATGA	1 cut(s)	553
CfoI	GCGC	1 cut(s)	862
Csp6I	GTAC	2 cut(s)	479, 548
CviAII	CATG	6 cut(s)	88, 175, 482, 554, 565, 674
CviJI	RGCY	8 cut(s)	31, 46, 71, 86, 184, 452, 803, 817
CviKI_1	RGCY	8 cut(s)	31, 46, 71, 86, 184, 452, 803, 817
CviQI	GTAC	2 cut(s)	479, 548
DdeI	CTNAG	1 cut(s)	440
DpnI	GATC	4 cut(s)	309, 397, 516, 588
DpnII	GATC	4 cut(s)	307, 395, 514, 586
Eam1104I	CTCTTC	1 cut(s)	99
EarI	CTCTTC	1 cut(s)	99
Eco130I	CCWWGG	1 cut(s)	87
Eco31I	GGTCTC	1 cut(s)	494
Eco32I	GATATC	1 cut(s)	302
Eco57I	CTGAAG	1 cut(s)	612
EcoRV	GATATC	1 cut(s)	302
EcoT14I	CCWWGG	1 cut(s)	87
ErhI	CCWWGG	1 cut(s)	87
FaeI	CATG	6 cut(s)	91, 178, 485, 557, 568, 677
FatI	CATG	6 cut(s)	87, 174, 481, 553, 564, 673
FblI	GTMKAC	1 cut(s)	382
Fnu4HI	GCNGC	4 cut(s)	29, 652, 804, 858
FokI	GGATG	4 cut(s)	140, 617, 748, 833
Fsp4HI	GCNGC	4 cut(s)	29, 652, 804, 858
FspBI	CTAG	1 cut(s)	11
GlaI	GCGC	1 cut(s)	861
GluI	GCNGC	4 cut(s)	29, 652, 804, 858
HaeIII	GGCC	1 cut(s)	86
HapII	CCGG	1 cut(s)	535
HhaI	GCGC	1 cut(s)	862
Hin1II	CATG	6 cut(s)	91, 178, 485, 557, 568, 677
Hin6I	GCGC	1 cut(s)	860
HinP1I	GCGC	1 cut(s)	860
HincII	GTYRAC	1 cut(s)	244
HindII	GTYRAC	1 cut(s)	244
HinfI	GANTC	6 cut(s)	56, 252, 340, 366, 619, 869
HpaII	CCGG	1 cut(s)	535
HphI	GGTGA	2 cut(s)	161, 212
Hpy166II	GTNNAC	2 cut(s)	244, 383
Hpy188I	TCNGA	6 cut(s)	7, 61, 120, 312, 519, 586
Hpy188III	TCNNGA	7 cut(s)	34, 305, 512, 554, 590, 812, 873
Hpy8I	GTNNAC	2 cut(s)	244, 383
Hpy99I	CGWCG	1 cut(s)	104
HpyAV	CCTTC	1 cut(s)	716
HpyCH4III	ACNGT	2 cut(s)	760, 782
HpyCH4IV	ACGT	1 cut(s)	114
HpyCH4V	TGCA	5 cut(s)	287, 420, 677, 806, 899
HpyF10VI	GCNNNNNNNGC	1 cut(s)	25
HpyF3I	CTNAG	1 cut(s)	440
HpySE526I	ACGT	1 cut(s)	114
Hsp92II	CATG	6 cut(s)	91, 178, 485, 557, 568, 677
HspAI	GCGC	1 cut(s)	860
Kzo9I	GATC	4 cut(s)	307, 395, 514, 586
LmnI	GCTCC	1 cut(s)	136
Lsp1109I	GCAGC	4 cut(s)	40, 663, 790, 844
LweI	GCATC	2 cut(s)	118, 844
MaeI	CTAG	1 cut(s)	11
MaeII	ACGT	1 cut(s)	114
MaeIII	GTNAC	5 cut(s)	136, 149, 569, 754, 782
MalI	GATC	4 cut(s)	309, 397, 516, 588
MboI	GATC	4 cut(s)	307, 395, 514, 586
MboII	GAAGA	3 cut(s)	116, 605, 654
MfeI	CAATTG	1 cut(s)	528
MflI	RGATCY	2 cut(s)	395, 586
MhlI	GDGCHC	1 cut(s)	706
MluCI	AATT	3 cut(s)	528, 775, 807
MlyI	GAGTC	3 cut(s)	65, 349, 628
MmeI	TCCRAC	1 cut(s)	39
MseI	TTAA	3 cut(s)	669, 741, 831
MslI	CAYNNNNRTG	2 cut(s)	356, 558
MspI	CCGG	1 cut(s)	535
MunI	CAATTG	1 cut(s)	528
MwoI	GCNNNNNNNGC	1 cut(s)	25
NcoI	CCATGG	1 cut(s)	87
NdeII	GATC	4 cut(s)	307, 395, 514, 586
NlaIII	CATG	6 cut(s)	91, 178, 485, 557, 568, 677
NlaIV	GGNNCC	1 cut(s)	562
NmuCI	GTSAC	3 cut(s)	136, 149, 569
OliI	CACNNNNGTG	1 cut(s)	356
PagI	TCATGA	1 cut(s)	553
PaqCI	CACCTGC	1 cut(s)	346
PfeI	GAWTC	3 cut(s)	252, 366, 869
PflMI	CCANNNNNTGG	1 cut(s)	712
PkrI	GCNGC	4 cut(s)	30, 653, 805, 859
PleI	GAGTC	3 cut(s)	64, 348, 627
PpsI	GAGTC	3 cut(s)	64, 348, 627
Psp1406I	AACGTT	1 cut(s)	114
PspN4I	GGNNCC	1 cut(s)	562
PstNI	CAGNNNCTG	1 cut(s)	590
PsuI	RGATCY	2 cut(s)	395, 586
RsaI	GTAC	2 cut(s)	480, 549
RsaNI	GTAC	2 cut(s)	479, 548
RseI	CAYNNNNRTG	2 cut(s)	356, 558
SaqAI	TTAA	3 cut(s)	669, 741, 831
SatI	GCNGC	4 cut(s)	29, 652, 804, 858
Sau3AI	GATC	4 cut(s)	307, 395, 514, 586
SchI	GAGTC	3 cut(s)	65, 349, 628
SduI	GDGCHC	1 cut(s)	706
SfaNI	GCATC	2 cut(s)	118, 844
SmiMI	CAYNNNNRTG	2 cut(s)	356, 558
SmlI	CTYRAG	4 cut(s)	32, 80, 290, 812
SmoI	CTYRAG	4 cut(s)	32, 80, 290, 812
Sse9I	AATT	3 cut(s)	528, 775, 807
SsiI	CCGC	1 cut(s)	147
SspMI	CTAG	1 cut(s)	11
StyI	CCWWGG	1 cut(s)	87
TaaI	ACNGT	2 cut(s)	760, 782
TaiI	ACGT	1 cut(s)	117
TaqI	TCGA	2 cut(s)	102, 126
TasI	AATT	3 cut(s)	528, 775, 807
TfiI	GAWTC	3 cut(s)	252, 366, 869
Tru1I	TTAA	3 cut(s)	669, 741, 831
Tru9I	TTAA	3 cut(s)	669, 741, 831
TscAI	CASTG	1 cut(s)	427
TseFI	GTSAC	3 cut(s)	136, 149, 569
TseI	GCWGC	4 cut(s)	28, 651, 803, 857
Tsp45I	GTSAC	3 cut(s)	136, 149, 569
TspDTI	ATGAA	3 cut(s)	191, 654, 837
TspGWI	ACGGA	1 cut(s)	250
TspRI	CASTG	1 cut(s)	427
Van91I	CCANNNNNTGG	1 cut(s)	712
XcmI	CCANNNNNNNNNTGG	1 cut(s)	508
XmiI	GTMKAC	1 cut(s)	382
XspI	CTAG	1 cut(s)	11

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.