RLG00000034087

Protein phosphatase 2A homologues, catalytic domain.

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
36593255 .. 36598627
5373 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000034087

Sequence Viewer

Length: 1518 bp
ATGTCTTCTGACCTAGACAGGCAAATAGAGCAGCTCAAGAAATGCGAGCCTCTCAAAGAGTCCGAAGTCAAGGCTCTCTGCCTCAAAGCCATGGAAATCCTCGTCGAAGAGAGCAACGTCCAGAGAGTCGATGCTCCTGTCACTATTTGCGGTGACATCCACGGTCAGTTTTACGACATGAAGGAGCTTTTCAAAGTGGGAGGCGATTGCCCAAAGACAAACTACTTGTTTCTTGGAGATTTCGTTGACAGAGGATTCTATTCAGTGGAGACATTTCTACTCCTACTTGCCCTGAAGGTGAGATATCCAGATCGGATAACACTCATTAGAGGGAACCATGAGAGTCGACAGATAACACAGGTGTATGGATTCTATGATGAGTGTCTACGAAAATATGGATCTGTCAATGTTTGGAGATATTGCACTGATATATTCGATTACCTAAGTCTGTCAGCTCTCATTGAGAATAAGATTTTCAGTGTCCATGGTGGTCTCTCTCCTGCCATTTCAACTTTGGATCAGATACGAACAATTGATCGTAAGCAAGAAGTACCTCATGATGGTGCTATGTGTGACCTACTATGGTCAGATCCTGAAGATATTGTGGATGGTTGGGGTTTGAGTCCACGTGGTGCTGGTTTCCTGTTCGGTGGCAGTGTTGTTTCTTCATTTAACCATGCAAACAACATTGACTATATATGTCGTGCCCACCAGTTGGTGATGGAAGGGTATAAATGGATGTTCAATAATCAGATTGTTACTGTATGGTCAGCTCCAAATTACTGTTACAGATGTGGTAATGTAGCTGCAATCCTTGAGCTGGATGAAAATCTTAACAAGCAGTTCCGAGTCTTCGATGCTGCCCCACAGATTGTGGTAAAATGCAGGAATCAAGAGGCACGCCGGCCAAAAAACCTGCACCGGACTACTTTCTATGAGATTGATGAAGTTTTGCCATTATCCAATAGGAGATTTAATGAACAAGATATACAGACACCAGGTGGAGGAGAATGGTCTTGCAGGGTACACACAAAGAATTTTATGGGCGAGCTTCTCGATGATCAGCTCTTCCAGCAACCAGCAAGAATTAATCTTTTTCTTGTGATTGCCACAGCAAGGGAGACATTAGGTGCTGGAAAGGAAGGCTTCTCCTTCTGTTTATTTGGTGAGTCGAGGAGTGCCTCTGGAATTTTGATCCTCCGATCTTCGGTGAGTCGAGGAGTTGCATTAGACCGCTTCAAAGCCTTCCCCGCCGGCGGCAACTGCGATGTTGATGCAGTTGACTCCACAGCCGCACGGCTCTTTTGTTCATCTCAGGTCTGGGATCCGAGCCTTGCATCCGGGTTCTGGGGGAGGTCGGAGCCAACCTCGATCACAGGGATGAGCCTCTTTCGCCTCAATTTCATGGCAGCCCACCGCAGAACAATAATCTCCAGCGAGATTTGGGTCCGACTTCAGGAATTTTGGAAGCGGGGATCCCTGGTCTCTTCATGTCCGGCTAGCTCAACTGTGGACTAG

Protein Analysis

506

Amino Acids

57.04

Weight (kDa)

5.94

Isoelectric Point (pI)

46.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Metallophos PF00149 46 - 240 1.8e-47 Calcineurin-like phosphoesterase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010665)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 924
AccB7I CCANNNNNTGG 1 cut(s) 715
AccI GTMKAC 2 cut(s) 346, 385
AciI CCGC 7 cut(s) 150, 1234, 1251, 1257, 1293, 1417, 1471
AclWI GGATC 8 cut(s) 406, 525, 584, 1189, 1319, 1332, 1470, 1483
AcoI YGGCCR 1 cut(s) 905
AcsI RAATTY 3 cut(s) 1036, 1188, 1460
AcuI CTGAAG 3 cut(s) 314, 615, 1439
AcvI CACGTG 1 cut(s) 629
AdeI CACNNNGTG 2 cut(s) 632, 1001
AfaI GTAC 2 cut(s) 552, 1026
AfiI CCNNNNNNNGG 9 cut(s) 560, 715, 820, 1004, 1116, 1207, 1256, 1347, 1456
AgsI TTSAA 4 cut(s) 193, 510, 745, 1240
AjnI CCWGG 2 cut(s) 997, 1479
AluBI AGCT 9 cut(s) 34, 187, 455, 773, 806, 820, 1051, 1066, 1503
AluI AGCT 9 cut(s) 34, 187, 455, 773, 806, 820, 1051, 1066, 1503
Alw26I GTCTC 4 cut(s) 263, 497, 1115, 1489
AlwI GGATC 8 cut(s) 406, 525, 584, 1189, 1319, 1332, 1470, 1483
AlwNI CAGNNNCTG 1 cut(s) 593
AoxI GGCC 1 cut(s) 905
ApeKI GCWGC 4 cut(s) 31, 806, 860, 1409
ApoI RAATTY 3 cut(s) 1036, 1188, 1460
AseI ATTAAT 1 cut(s) 1089
AspS9I GGNCC 1 cut(s) 1447
AsuC2I CCSGG 1 cut(s) 1342
AsuHPI GGTGA 5 cut(s) 164, 310, 730, 1178, 1222
AsuNHI GCTAGC 1 cut(s) 1499
AvaII GGWCC 1 cut(s) 1447
BaeGI GKGCMC 1 cut(s) 709
BamHI GGATCC 2 cut(s) 1324, 1475
BbrPI CACGTG 1 cut(s) 629
BbsI GAAGAC 1 cut(s) 844
BbvI GCAGC 4 cut(s) 43, 793, 847, 1421
BccI CCATC 3 cut(s) 554, 602, 715
BceAI ACGGC 1 cut(s) 1313
BcgI CGANNNNNNTGC 2 cut(s) 1256, 1290
BciT130I CCWGG 2 cut(s) 999, 1481
BclI TGATCA 1 cut(s) 1060
BcnI CCSGG 1 cut(s) 1342
BcoDI GTCTC 4 cut(s) 263, 497, 1115, 1489
BfaI CTAG 3 cut(s) 14, 1500, 1516
BfuAI ACCTGC 1 cut(s) 924
BisI GCNGC 6 cut(s) 32, 807, 861, 1258, 1293, 1410
BlsI GCNGC 6 cut(s) 33, 808, 862, 1259, 1294, 1411
Bme1390I CCNGG 3 cut(s) 999, 1342, 1481
Bme18I GGWCC 1 cut(s) 1447
BmgT120I GGNCC 1 cut(s) 1447
BmiI GGNNCC 5 cut(s) 335, 1326, 1362, 1448, 1477
BmrFI CCNGG 3 cut(s) 999, 1342, 1481
BmsI GCATC 4 cut(s) 121, 847, 1264, 1346
BmtI GCTAGC 1 cut(s) 1503
BpiI GAAGAC 1 cut(s) 844
BplI GAGNNNNNCTC 2 cut(s) 1352, 1384
BpmI CTGGAG 1 cut(s) 1417
BpuEI CTTGAG 2 cut(s) 20, 836
BpuMI CCSGG 1 cut(s) 1342
BsaAI YACGTR 1 cut(s) 629
BsaBI GATNNNNATC 1 cut(s) 828
BsaI GGTCTC 2 cut(s) 497, 1489
BsaJI CCNNGG 4 cut(s) 90, 160, 484, 1479
BsaWI WCCGGW 1 cut(s) 921
BsaXI ACNNNNNCTCC 2 cut(s) 228, 258
Bsc4I CCNNNNNNNGG 9 cut(s) 560, 715, 820, 1004, 1116, 1207, 1256, 1347, 1456
Bse118I RCCGGY 2 cut(s) 903, 1253
Bse1I ACTGG 1 cut(s) 712
Bse8I GATNNNNATC 1 cut(s) 828
BseBI CCWGG 2 cut(s) 999, 1481
BseDI CCNNGG 4 cut(s) 90, 160, 484, 1479
BseGI GGATG 6 cut(s) 156, 613, 744, 829, 1337, 1386
BseJI GATNNNNATC 1 cut(s) 828
BseLI CCNNNNNNNGG 9 cut(s) 560, 715, 820, 1004, 1116, 1207, 1256, 1347, 1456
BseMII CTCAG 1 cut(s) 1328
BseNI ACTGG 1 cut(s) 712
BseRI GAGGAG 3 cut(s) 1020, 1189, 1233
BseSI GKGCMC 1 cut(s) 709
BseXI GCAGC 4 cut(s) 43, 793, 847, 1421
BsgI GTGCAG 1 cut(s) 902
BshFI GGCC 1 cut(s) 907
BsiSI CCGG 5 cut(s) 904, 922, 1254, 1341, 1496
BslI CCNNNNNNNGG 9 cut(s) 560, 715, 820, 1004, 1116, 1207, 1256, 1347, 1456
BsmAI GTCTC 4 cut(s) 263, 497, 1115, 1489
BsnI GGCC 1 cut(s) 907
Bso31I GGTCTC 2 cut(s) 497, 1489
Bsp1286I GDGCHC 1 cut(s) 709
Bsp19I CCATGG 2 cut(s) 90, 484
BspACI CCGC 7 cut(s) 150, 1234, 1251, 1257, 1293, 1417, 1471
BspANI GGCC 1 cut(s) 907
BspCNI CTCAG 1 cut(s) 1327
BspHI TCATGA 1 cut(s) 556
BspLI GGNNCC 5 cut(s) 335, 1326, 1362, 1448, 1477
BspMI ACCTGC 1 cut(s) 924
BspOI GCTAGC 1 cut(s) 1503
BspPI GGATC 8 cut(s) 406, 525, 584, 1189, 1319, 1332, 1470, 1483
BspQI GCTCTTC 1 cut(s) 1073
BspTNI GGTCTC 2 cut(s) 497, 1489
BsrFI RCCGGY 2 cut(s) 903, 1253
BsrI ACTGG 1 cut(s) 712
BssAI RCCGGY 2 cut(s) 903, 1253
BssECI CCNNGG 4 cut(s) 90, 160, 484, 1479
BssT1I CCWWGG 2 cut(s) 90, 484
Bst2UI CCWGG 2 cut(s) 999, 1481
Bst4CI ACNGT 4 cut(s) 164, 763, 785, 1510
Bst6I CTCTTC 3 cut(s) 102, 1073, 1492
BstBAI YACGTR 1 cut(s) 629
BstC8I GCNNGC 6 cut(s) 47, 901, 905, 1049, 1255, 1501
BstDEI CTNAG 2 cut(s) 443, 1314
BstDSI CCRYGG 3 cut(s) 90, 160, 484
BstF5I GGATG 6 cut(s) 156, 613, 744, 829, 1337, 1386
BstMAI GTCTC 4 cut(s) 263, 497, 1115, 1489
BstMWI GCNNNNNNNGC 5 cut(s) 28, 1072, 1250, 1263, 1392
BstNI CCWGG 2 cut(s) 999, 1481
BstSCI CCNGG 3 cut(s) 997, 1340, 1479
BstSLI GKGCMC 1 cut(s) 709
BstV1I GCAGC 4 cut(s) 43, 793, 847, 1421
BstV2I GAAGAC 1 cut(s) 844
BstX2I RGATCY 4 cut(s) 398, 589, 1324, 1475
BstYI RGATCY 4 cut(s) 398, 589, 1324, 1475
BsuRI GGCC 1 cut(s) 907
BtgI CCRYGG 3 cut(s) 90, 160, 484
BtgZI GCGATG 1 cut(s) 1281
BtsCI GGATG 6 cut(s) 156, 613, 744, 829, 1337, 1386
BtsI GCAGTG 1 cut(s) 661
BtsIMutI CAGTG 4 cut(s) 270, 423, 484, 661
BveI ACCTGC 1 cut(s) 924
Cac8I GCNNGC 6 cut(s) 47, 901, 905, 1049, 1255, 1501
CaiI CAGNNNCTG 1 cut(s) 593
CciI TCATGA 1 cut(s) 556
Cfr10I RCCGGY 2 cut(s) 903, 1253
Cfr13I GGNCC 1 cut(s) 1447
CsiI ACCWGGT 1 cut(s) 997
Csp6I GTAC 2 cut(s) 551, 1025
CviAII CATG 8 cut(s) 91, 178, 338, 485, 557, 677, 1405, 1491
CviQI GTAC 2 cut(s) 551, 1025
DdeI CTNAG 2 cut(s) 443, 1314
DraIII CACNNNGTG 2 cut(s) 632, 1001
EaeI YGGCCR 1 cut(s) 905
Eam1104I CTCTTC 3 cut(s) 102, 1073, 1492
EarI CTCTTC 3 cut(s) 102, 1073, 1492
Eco130I CCWWGG 2 cut(s) 90, 484
Eco31I GGTCTC 2 cut(s) 497, 1489
Eco32I GATATC 1 cut(s) 305
Eco47I GGWCC 1 cut(s) 1447
Eco57I CTGAAG 3 cut(s) 314, 615, 1439
Eco72I CACGTG 1 cut(s) 629
EcoRII CCWGG 2 cut(s) 997, 1479
EcoRV GATATC 1 cut(s) 305
EcoT14I CCWWGG 2 cut(s) 90, 484
ErhI CCWWGG 2 cut(s) 90, 484
FaeI CATG 8 cut(s) 94, 181, 341, 488, 560, 680, 1408, 1494
FalI AAGNNNNNCTT 2 cut(s) 1130, 1162
FatI CATG 8 cut(s) 90, 177, 337, 484, 556, 676, 1404, 1490
FauI CCCGC 2 cut(s) 1258, 1464
FbaI TGATCA 1 cut(s) 1060
FblI GTMKAC 2 cut(s) 346, 385
Fnu4HI GCNGC 6 cut(s) 32, 807, 861, 1258, 1293, 1410
FokI GGATG 6 cut(s) 143, 620, 751, 836, 1324, 1393
Fsp4HI GCNGC 6 cut(s) 32, 807, 861, 1258, 1293, 1410
FspBI CTAG 3 cut(s) 14, 1500, 1516
GluI GCNGC 6 cut(s) 32, 807, 861, 1258, 1293, 1410
GsuI CTGGAG 1 cut(s) 1417
HaeIII GGCC 1 cut(s) 907
HapII CCGG 5 cut(s) 904, 922, 1254, 1341, 1496
Hin1II CATG 8 cut(s) 94, 181, 341, 488, 560, 680, 1408, 1494
HincII GTYRAC 3 cut(s) 247, 347, 1282
HindII GTYRAC 3 cut(s) 247, 347, 1282
HpaII CCGG 5 cut(s) 904, 922, 1254, 1341, 1496
HphI GGTGA 5 cut(s) 164, 310, 730, 1178, 1222
Hpy166II GTNNAC 7 cut(s) 247, 347, 386, 626, 1027, 1282, 1513
Hpy188III TCNNGA 9 cut(s) 37, 121, 308, 557, 593, 893, 1055, 1185, 1457
Hpy8I GTNNAC 7 cut(s) 247, 347, 386, 626, 1027, 1282, 1513
Hpy99I CGWCG 1 cut(s) 107
HpyAV CCTTC 6 cut(s) 175, 289, 719, 1136, 1162, 1255
HpyCH4III ACNGT 4 cut(s) 164, 763, 785, 1510
HpyCH4IV ACGT 2 cut(s) 117, 628
HpyCH4V TGCA 9 cut(s) 423, 680, 809, 885, 919, 1020, 1226, 1277, 1337
HpyF10VI GCNNNNNNNGC 5 cut(s) 28, 1072, 1250, 1263, 1392
HpyF3I CTNAG 2 cut(s) 443, 1314
HpySE526I ACGT 2 cut(s) 117, 628
Hsp92II CATG 8 cut(s) 94, 181, 341, 488, 560, 680, 1408, 1494
KroI GCCGGC 2 cut(s) 903, 1253
KroNI GCCGGC 2 cut(s) 905, 1255
Ksp22I TGATCA 1 cut(s) 1060
LguI GCTCTTC 1 cut(s) 1073
LmnI GCTCC 4 cut(s) 139, 184, 778, 1360
Lsp1109I GCAGC 4 cut(s) 43, 793, 847, 1421
LweI GCATC 4 cut(s) 121, 847, 1264, 1346
MabI ACCWGGT 1 cut(s) 997
MaeI CTAG 3 cut(s) 14, 1500, 1516
MaeII ACGT 2 cut(s) 117, 628
MaeIII GTNAC 5 cut(s) 139, 152, 572, 757, 785
MboII GAAGA 7 cut(s) 119, 608, 657, 844, 1060, 1197, 1479
MfeI CAATTG 1 cut(s) 531
MflI RGATCY 4 cut(s) 398, 589, 1324, 1475
MhlI GDGCHC 1 cut(s) 709
MluCI AATT 7 cut(s) 531, 778, 1036, 1086, 1188, 1399, 1460
MlyI GAGTC 8 cut(s) 68, 135, 352, 631, 858, 1178, 1222, 1277
MmeI TCCRAC 2 cut(s) 1338, 1474
MreI CGCCGGCG 1 cut(s) 1253
MroNI GCCGGC 2 cut(s) 903, 1253
MseI TTAA 4 cut(s) 672, 834, 975, 1089
MslI CAYNNNNRTG 2 cut(s) 561, 1379
MspI CCGG 5 cut(s) 904, 922, 1254, 1341, 1496
MspR9I CCNGG 3 cut(s) 999, 1342, 1481
MunI CAATTG 1 cut(s) 531
MvaI CCWGG 2 cut(s) 999, 1481
MwoI GCNNNNNNNGC 5 cut(s) 28, 1072, 1250, 1263, 1392
NaeI GCCGGC 2 cut(s) 905, 1255
NciI CCSGG 1 cut(s) 1342
NcoI CCATGG 2 cut(s) 90, 484
NgoMIV GCCGGC 2 cut(s) 903, 1253
NheI GCTAGC 1 cut(s) 1499
NlaIII CATG 8 cut(s) 94, 181, 341, 488, 560, 680, 1408, 1494
NlaIV GGNNCC 5 cut(s) 335, 1326, 1362, 1448, 1477
NmuCI GTSAC 3 cut(s) 139, 152, 572
PagI TCATGA 1 cut(s) 556
PciSI GCTCTTC 1 cut(s) 1073
PdiI GCCGGC 2 cut(s) 905, 1255
PfeI GAWTC 3 cut(s) 255, 369, 889
PflMI CCANNNNNTGG 1 cut(s) 715
PkrI GCNGC 6 cut(s) 33, 808, 862, 1259, 1294, 1411
PleI GAGTC 8 cut(s) 67, 134, 351, 630, 857, 1177, 1221, 1277
PmaCI CACGTG 1 cut(s) 629
PmlI CACGTG 1 cut(s) 629
PpsI GAGTC 8 cut(s) 67, 134, 351, 630, 857, 1177, 1221, 1277
Ppu21I YACGTR 1 cut(s) 629
PshBI ATTAAT 1 cut(s) 1089
Psp6I CCWGG 2 cut(s) 997, 1479
PspCI CACGTG 1 cut(s) 629
PspGI CCWGG 2 cut(s) 997, 1479
PspN4I GGNNCC 5 cut(s) 335, 1326, 1362, 1448, 1477
PspPI GGNCC 1 cut(s) 1447
PsrI GAACNNNNNNTAC 2 cut(s) 972, 1004
PstNI CAGNNNCTG 1 cut(s) 593
PsuI RGATCY 4 cut(s) 398, 589, 1324, 1475
RsaI GTAC 2 cut(s) 552, 1026
RsaNI GTAC 2 cut(s) 551, 1025
RseI CAYNNNNRTG 2 cut(s) 561, 1379
SalI GTCGAC 1 cut(s) 345
SapI GCTCTTC 1 cut(s) 1073
SaqAI TTAA 4 cut(s) 672, 834, 975, 1089
SatI GCNGC 6 cut(s) 32, 807, 861, 1258, 1293, 1410
Sau96I GGNCC 1 cut(s) 1447
SchI GAGTC 8 cut(s) 68, 135, 352, 631, 858, 1178, 1222, 1277
ScrFI CCNGG 3 cut(s) 999, 1342, 1481
SduI GDGCHC 1 cut(s) 709
SexAI ACCWGGT 1 cut(s) 997
SfaNI GCATC 4 cut(s) 121, 847, 1264, 1346
SgrAI CRCCGGYG 1 cut(s) 1253
SinI GGWCC 1 cut(s) 1447
SmiMI CAYNNNNRTG 2 cut(s) 561, 1379
SmlI CTYRAG 2 cut(s) 35, 815
SmoI CTYRAG 2 cut(s) 35, 815
Sse9I AATT 7 cut(s) 531, 778, 1036, 1086, 1188, 1399, 1460
SsiI CCGC 7 cut(s) 150, 1234, 1251, 1257, 1293, 1417, 1471
SspMI CTAG 3 cut(s) 14, 1500, 1516
StyD4I CCNGG 3 cut(s) 997, 1340, 1479
StyI CCWWGG 2 cut(s) 90, 484
TaaI ACNGT 4 cut(s) 164, 763, 785, 1510
TaiI ACGT 2 cut(s) 120, 631
TaqI TCGA 9 cut(s) 105, 129, 346, 435, 855, 1056, 1172, 1216, 1370
TasI AATT 7 cut(s) 531, 778, 1036, 1086, 1188, 1399, 1460
TauI GCSGC 2 cut(s) 1260, 1295
TfiI GAWTC 3 cut(s) 255, 369, 889
Tru1I TTAA 4 cut(s) 672, 834, 975, 1089
Tru9I TTAA 4 cut(s) 672, 834, 975, 1089
TscAI CASTG 4 cut(s) 270, 430, 484, 661
TseFI GTSAC 3 cut(s) 139, 152, 572
TseI GCWGC 4 cut(s) 31, 806, 860, 1409
Tsp45I GTSAC 3 cut(s) 139, 152, 572
TspDTI ATGAA 8 cut(s) 194, 657, 840, 960, 993, 1299, 1393, 1479
TspRI CASTG 4 cut(s) 270, 430, 484, 661
Van91I CCANNNNNTGG 1 cut(s) 715
VpaK11BI GGWCC 1 cut(s) 1447
VspI ATTAAT 1 cut(s) 1089
XapI RAATTY 3 cut(s) 1036, 1188, 1460
XcmI CCANNNNNNNNNTGG 1 cut(s) 511
XmiI GTMKAC 2 cut(s) 346, 385
XspI CTAG 3 cut(s) 14, 1500, 1516
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.