Prupe.4G273200_v2.0.a1

Acts as an adapter for the XPO1 CRM1-mediated export of the 60S ribosomal subunit

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
22567246 .. 22570511
3266 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G273200.1

Sequence Viewer

Length: 1539 bp
ATGGCTGAAGAGGCAGGTATGTTTATGGTTCATCAAACTGTTGGCAGTGTACTATGTTGCAAATGCGGTATCCCCATGGCACCAAATGCTGCCAATATGTGTGTCAAGTGTTTGCGCTCTGAAGTTGATATTACGGAAGGTTTGCAGAAGCATGTGACCATTGTTCATTGTCCAGAGTGTAATTGCTACTTGCAGCCTCCAAGAACTTGGATCAAAGCCCAATTAGAATCAAAGGAGCTGCTAACCTTCTGTGTTAAGAGATTGAAGAATTTGAATAAAGTTAGGCTAGTTCATGCCGAATTTATTTGGACTGAACCTCACTCCAAGAGGATCAAGGTTAAGTTGAAAGTTCAGAAGGAGGTTCTTAATGGAGCAATACTTGAACAATCATATGTTGTAGAGTATGTTCAACAAGAGCATATGTGTGAGTCTTGTTCAAGGGTTCAGGCCAACCCTGACCAGTGGGTTGCATCTGTGCAACTCCGCCAGCATGTTTCTCACCGACGCACGTTTTTCTATCTGGAGCAGCTGATCCTGAGGCATGCTGCTGCTGCTAGTGCCATAAAAATAAAGCAGATGGAACAAGGTATCGACTTCTTTTTTGCAAACCGGAGTCATGGTGTGAAATTTGTGGAATTTGTTGGTAAAGTTGCTCCAGTAAGGAGTCGCAGTGACAAACAGCTTGTTTCCCATGATTCTAAAAGTAATAATTATAATTATAAGCATACATTCTCAGTTGAGATAAGCCCCATTTGCCGTGAAGATTTGATTTGTCTGCCTCCCAAGGTCAGGTCCAGTTTGGGAAACCTCGGTCCTCTTGTGATCTGCACTAAAGTGACCAACAGTATTGCTTTGTTTGATCCTTTCACCCTGAGACATTGTTTCCTTGATACTGATCAGTATTGGAGGTATTCCTTTAAATCTCTACATACAAGCAGGGAGCTAGTGGAGTATATAGTGCTTGATTTGGAGATTATTTCGCCCGAAGTTAATGTTGGTGGCTCAAGGTTAGCTTTAGCTGATGCACAAGTTGCTCGTGTCTCTGACTTTGGGAAGAATGATACTATTTTCAACATAAAAACACATCTTGGCCATCTTTTAAACCCCGGGGATTATGCTCTTGGTTACGACTTATATGGGGCTAACAGTAATGACGATGAACTAGAGAAGTACAAGGGTCTAGTCATTCCTGATGCAATTTTAATAAAGAAGAGCTACGAAGAAAAGCGACAGAAGAAACACGCGAAGGCTCGCCCATGGAAACTTAAATCCCTTGGCATGGAAGTTGATGATAAAGCTAAACTTGATCAAGAAAAGGTGGACTCTGAGTATGAGCAGTTCTTGAAGGATCTGGAGGAGAACCCTGAGATGAGGTTGAATATATCATTATACCATAATGAAGAATACCAGCCGTCAGAGATGGCATCCATGACTGATGGGGAAGATGCACCTTCTGTCCCACTTGAAGAGTTGCTTGCTGACCTTGAACTGCGTGATAACGAGGATGAGGATGAGGATGATAGTAGCATGAGGGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

513

Amino Acids

58.59

Weight (kDa)

5.89

Isoelectric Point (pI)

43.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 714, 720
Acc36I ACCTGC 1 cut(s) 5
AccB1I GGYRCC 1 cut(s) 79
AccII CGCG 1 cut(s) 1244
AciI CCGC 2 cut(s) 66, 484
AclWI GGATC 5 cut(s) 218, 338, 526, 854, 1356
AcoI YGGCCR 1 cut(s) 1090
AcsI RAATTY 4 cut(s) 268, 299, 626, 635
AcuI CTGAAG 2 cut(s) 27, 141
AfaI GTAC 2 cut(s) 51, 1172
AfiI CCNNNNNNNGG 2 cut(s) 789, 1279
AjuI GAANNNNNNNTTGG 2 cut(s) 978, 1010
AleI CACNNNNGTG 1 cut(s) 833
AluBI AGCT 8 cut(s) 238, 529, 682, 943, 1013, 1019, 1215, 1298
AluI AGCT 8 cut(s) 238, 529, 682, 943, 1013, 1019, 1215, 1298
Alw26I GTCTC 2 cut(s) 868, 1045
AlwI GGATC 5 cut(s) 218, 338, 526, 854, 1356
Ama87I CYCGRG 1 cut(s) 1106
AoxI GGCC 2 cut(s) 447, 1090
ApeKI GCWGC 7 cut(s) 89, 193, 238, 526, 545, 548, 551
ApoI RAATTY 4 cut(s) 268, 299, 626, 635
ArsI GACNNNNNNTTYG 2 cut(s) 584, 616
AspLEI GCGC 1 cut(s) 117
AspS9I GGNCC 2 cut(s) 792, 812
AsuC2I CCSGG 2 cut(s) 1107, 1108
AsuHPI GGTGA 2 cut(s) 491, 859
AvaI CYCGRG 1 cut(s) 1106
AvaII GGWCC 2 cut(s) 792, 812
AxyI CCTNAGG 1 cut(s) 536
BalI TGGCCA 1 cut(s) 1092
BanI GGYRCC 1 cut(s) 79
BauI CACGAG 1 cut(s) 1035
BbvI GCAGC 7 cut(s) 76, 205, 225, 532, 535, 538, 538
BccI CCATC 4 cut(s) 571, 1101, 1414, 1430
BceAI ACGGC 2 cut(s) 741, 1396
BciVI GTATCC 1 cut(s) 80
BclI TGATCA 2 cut(s) 895, 1306
BcnI CCSGG 2 cut(s) 1107, 1108
BcoDI GTCTC 2 cut(s) 868, 1045
BfaI CTAG 5 cut(s) 287, 555, 944, 1163, 1181
BfuAI ACCTGC 1 cut(s) 5
BfuI GTATCC 1 cut(s) 80
BisI GCNGC 7 cut(s) 90, 194, 239, 527, 546, 549, 552
BlsI GCNGC 7 cut(s) 91, 195, 240, 528, 547, 550, 553
Bme1390I CCNGG 2 cut(s) 1107, 1108
Bme18I GGWCC 2 cut(s) 792, 812
BmeT110I CYCGRG 1 cut(s) 1106
BmgT120I GGNCC 2 cut(s) 792, 812
BmiI GGNNCC 1 cut(s) 81
BmrFI CCNGG 2 cut(s) 1107, 1108
BmsI GCATC 5 cut(s) 479, 1012, 1183, 1433, 1435
BpmI CTGGAG 3 cut(s) 542, 639, 1373
BpuEI CTTGAG 1 cut(s) 988
BpuMI CCSGG 2 cut(s) 1107, 1108
BsaBI GATNNNNATC 1 cut(s) 894
BsaJI CCNNGG 8 cut(s) 75, 783, 808, 1105, 1106, 1107, 1256, 1273
BsaWI WCCGGW 1 cut(s) 609
BsaXI ACNNNNNCTCC 4 cut(s) 604, 634, 655, 685
Bsc4I CCNNNNNNNGG 2 cut(s) 789, 1279
Bse1I ACTGG 3 cut(s) 460, 656, 795
Bse21I CCTNAGG 1 cut(s) 536
Bse8I GATNNNNATC 1 cut(s) 894
BseDI CCNNGG 8 cut(s) 75, 783, 808, 1105, 1106, 1107, 1256, 1273
BseGI GGATG 4 cut(s) 1424, 1510, 1516, 1522
BseJI GATNNNNATC 1 cut(s) 894
BseLI CCNNNNNNNGG 2 cut(s) 789, 1279
BseMII CTCAG 5 cut(s) 527, 747, 863, 1317, 1356
BseNI ACTGG 3 cut(s) 460, 656, 795
BseRI GAGGAG 1 cut(s) 1370
BseXI GCAGC 7 cut(s) 76, 205, 225, 532, 535, 538, 538
BsgI GTGCAG 1 cut(s) 811
Bsh1236I CGCG 1 cut(s) 1244
BshFI GGCC 2 cut(s) 449, 1092
BshNI GGYRCC 1 cut(s) 79
BsiHKCI CYCGRG 1 cut(s) 1106
BsiSI CCGG 2 cut(s) 610, 1107
BslFI GGGAC 1 cut(s) 1442
BslI CCNNNNNNNGG 2 cut(s) 789, 1279
BsmAI GTCTC 2 cut(s) 868, 1045
BsmFI GGGAC 1 cut(s) 1442
BsnI GGCC 2 cut(s) 449, 1092
BsoBI CYCGRG 1 cut(s) 1106
Bsp143I GATC 8 cut(s) 210, 330, 531, 822, 859, 895, 1306, 1348
Bsp19I CCATGG 2 cut(s) 75, 1256
BspACI CCGC 2 cut(s) 66, 484
BspANI GGCC 2 cut(s) 449, 1092
BspCNI CTCAG 5 cut(s) 528, 746, 864, 1318, 1357
BspFNI CGCG 1 cut(s) 1244
BspLI GGNNCC 1 cut(s) 81
BspMI ACCTGC 1 cut(s) 5
BspPI GGATC 5 cut(s) 218, 338, 526, 854, 1356
BspQI GCTCTTC 1 cut(s) 1205
BspT107I GGYRCC 1 cut(s) 79
BsrI ACTGG 3 cut(s) 460, 656, 795
BssECI CCNNGG 8 cut(s) 75, 783, 808, 1105, 1106, 1107, 1256, 1273
BssMI GATC 8 cut(s) 210, 330, 531, 822, 859, 895, 1306, 1348
BssSI CACGAG 1 cut(s) 1035
BssT1I CCWWGG 4 cut(s) 75, 783, 1256, 1273
Bst2BI CACGAG 1 cut(s) 1035
Bst4CI ACNGT 3 cut(s) 40, 845, 1148
Bst6I CTCTTC 3 cut(s) 3, 1205, 1461
BstAPI GCANNNNNTGC 2 cut(s) 86, 1031
BstC8I GCNNGC 4 cut(s) 488, 543, 1252, 1476
BstDEI CTNAG 5 cut(s) 536, 733, 872, 1326, 1365
BstDSI CCRYGG 2 cut(s) 75, 1256
BstF5I GGATG 4 cut(s) 1424, 1510, 1516, 1522
BstFNI CGCG 1 cut(s) 1244
BstHHI GCGC 1 cut(s) 117
BstKTI GATC 8 cut(s) 213, 333, 534, 825, 862, 898, 1309, 1351
BstMAI GTCTC 2 cut(s) 868, 1045
BstMBI GATC 8 cut(s) 210, 330, 531, 822, 859, 895, 1306, 1348
BstMWI GCNNNNNNNGC 6 cut(s) 11, 86, 551, 557, 753, 1031
BstNSI RCATGY 3 cut(s) 155, 494, 545
BstSCI CCNGG 2 cut(s) 1105, 1106
BstUI CGCG 1 cut(s) 1244
BstV1I GCAGC 7 cut(s) 76, 205, 225, 532, 535, 538, 538
BstX2I RGATCY 1 cut(s) 1348
BstXI CCANNNNNNTGG 1 cut(s) 207
BstYI RGATCY 1 cut(s) 1348
Bsu36I CCTNAGG 1 cut(s) 536
BsuI GTATCC 1 cut(s) 80
BsuRI GGCC 2 cut(s) 449, 1092
BtgI CCRYGG 2 cut(s) 75, 1256
BtsCI GGATG 4 cut(s) 1424, 1510, 1516, 1522
BtsI GCAGTG 2 cut(s) 52, 676
BtsIMutI CAGTG 3 cut(s) 52, 467, 676
BveI ACCTGC 1 cut(s) 5
Cac8I GCNNGC 4 cut(s) 488, 543, 1252, 1476
CfoI GCGC 1 cut(s) 117
Cfr13I GGNCC 2 cut(s) 792, 812
Cfr9I CCCGGG 1 cut(s) 1106
CseI GACGC 1 cut(s) 513
Csp6I GTAC 2 cut(s) 50, 1171
CviQI GTAC 2 cut(s) 50, 1171
DdeI CTNAG 5 cut(s) 536, 733, 872, 1326, 1365
DpnI GATC 8 cut(s) 212, 332, 533, 824, 861, 897, 1308, 1350
DpnII GATC 8 cut(s) 210, 330, 531, 822, 859, 895, 1306, 1348
DraI TTTAAA 2 cut(s) 919, 1101
EaeI YGGCCR 1 cut(s) 1090
Eam1104I CTCTTC 3 cut(s) 3, 1205, 1461
EarI CTCTTC 3 cut(s) 3, 1205, 1461
EciI GGCGGA 1 cut(s) 473
Eco130I CCWWGG 4 cut(s) 75, 783, 1256, 1273
Eco47I GGWCC 2 cut(s) 792, 812
Eco57I CTGAAG 2 cut(s) 27, 141
Eco81I CCTNAGG 1 cut(s) 536
Eco88I CYCGRG 1 cut(s) 1106
EcoT14I CCWWGG 4 cut(s) 75, 783, 1256, 1273
ErhI CCWWGG 4 cut(s) 75, 783, 1256, 1273
FalI AAGNNNNNCTT 6 cut(s) 997, 1029, 1287, 1319, 1458, 1490
FaqI GGGAC 1 cut(s) 1442
FauNDI CATATG 2 cut(s) 391, 420
FbaI TGATCA 2 cut(s) 895, 1306
Fnu4HI GCNGC 7 cut(s) 90, 194, 239, 527, 546, 549, 552
FokI GGATG 4 cut(s) 1411, 1517, 1523, 1529
Fsp4HI GCNGC 7 cut(s) 90, 194, 239, 527, 546, 549, 552
FspBI CTAG 5 cut(s) 287, 555, 944, 1163, 1181
GlaI GCGC 1 cut(s) 116
GluI GCNGC 7 cut(s) 90, 194, 239, 527, 546, 549, 552
GsuI CTGGAG 3 cut(s) 542, 639, 1373
HaeIII GGCC 2 cut(s) 449, 1092
HapII CCGG 2 cut(s) 610, 1107
HgaI GACGC 1 cut(s) 513
HhaI GCGC 1 cut(s) 117
Hin6I GCGC 1 cut(s) 115
HinP1I GCGC 1 cut(s) 115
HinfI GANTC 6 cut(s) 227, 428, 613, 664, 695, 1322
HpaII CCGG 2 cut(s) 610, 1107
HphI GGTGA 2 cut(s) 491, 859
Hpy166II GTNNAC 2 cut(s) 50, 1321
Hpy188I TCNGA 5 cut(s) 121, 354, 1045, 1327, 1417
Hpy188III TCNNGA 7 cut(s) 173, 521, 535, 1190, 1310, 1342, 1352
Hpy8I GTNNAC 2 cut(s) 50, 1321
Hpy99I CGWCG 1 cut(s) 507
HpyAV CCTTC 6 cut(s) 131, 256, 349, 1240, 1339, 1461
HpyCH4III ACNGT 3 cut(s) 40, 845, 1148
HpyCH4IV ACGT 1 cut(s) 509
HpyF10VI GCNNNNNNNGC 6 cut(s) 11, 86, 551, 557, 753, 1031
HpyF3I CTNAG 5 cut(s) 536, 733, 872, 1326, 1365
HpySE526I ACGT 1 cut(s) 509
HspAI GCGC 1 cut(s) 115
Ksp22I TGATCA 2 cut(s) 895, 1306
Kzo9I GATC 8 cut(s) 210, 330, 531, 822, 859, 895, 1306, 1348
LguI GCTCTTC 1 cut(s) 1205
LmnI GCTCC 5 cut(s) 235, 371, 523, 658, 940
Lsp1109I GCAGC 7 cut(s) 76, 205, 225, 532, 535, 538, 538
LweI GCATC 5 cut(s) 479, 1012, 1183, 1433, 1435
MaeI CTAG 5 cut(s) 287, 555, 944, 1163, 1181
MaeII ACGT 1 cut(s) 509
MaeIII GTNAC 4 cut(s) 154, 671, 835, 1124
MalI GATC 8 cut(s) 212, 332, 533, 824, 861, 897, 1308, 1350
MboI GATC 8 cut(s) 210, 330, 531, 822, 859, 895, 1306, 1348
MflI RGATCY 1 cut(s) 1348
MlsI TGGCCA 1 cut(s) 1092
MluCI AATT 9 cut(s) 181, 221, 268, 299, 626, 635, 709, 715, 1197
MluNI TGGCCA 1 cut(s) 1092
MlyI GAGTC 4 cut(s) 437, 622, 673, 1316
Mox20I TGGCCA 1 cut(s) 1092
MscI TGGCCA 1 cut(s) 1092
MseI TTAA 8 cut(s) 255, 339, 366, 918, 990, 1100, 1202, 1266
MslI CAYNNNNRTG 2 cut(s) 423, 833
Msp20I TGGCCA 1 cut(s) 1092
MspA1I CMGCKG 1 cut(s) 529
MspI CCGG 2 cut(s) 610, 1107
MspR9I CCNGG 2 cut(s) 1107, 1108
MvnI CGCG 1 cut(s) 1244
MwoI GCNNNNNNNGC 6 cut(s) 11, 86, 551, 557, 753, 1031
NciI CCSGG 2 cut(s) 1107, 1108
NcoI CCATGG 2 cut(s) 75, 1256
NdeI CATATG 2 cut(s) 391, 420
NdeII GATC 8 cut(s) 210, 330, 531, 822, 859, 895, 1306, 1348
NlaIV GGNNCC 1 cut(s) 81
NmuCI GTSAC 3 cut(s) 154, 671, 835
NspI RCATGY 3 cut(s) 155, 494, 545
OliI CACNNNNGTG 1 cut(s) 833
PaeI GCATGC 1 cut(s) 545
PciSI GCTCTTC 1 cut(s) 1205
PfeI GAWTC 2 cut(s) 227, 695
PkrI GCNGC 7 cut(s) 91, 195, 240, 528, 547, 550, 553
PleI GAGTC 4 cut(s) 436, 621, 672, 1316
PpsI GAGTC 4 cut(s) 436, 621, 672, 1316
PsiI TTATAA 2 cut(s) 714, 720
PspN4I GGNNCC 1 cut(s) 81
PspPI GGNCC 2 cut(s) 792, 812
PsrI GAACNNNNNNTAC 4 cut(s) 390, 422, 1322, 1354
PsuI RGATCY 1 cut(s) 1348
PvuII CAGCTG 1 cut(s) 529
RsaI GTAC 2 cut(s) 51, 1172
RsaNI GTAC 2 cut(s) 50, 1171
RseI CAYNNNNRTG 2 cut(s) 423, 833
SapI GCTCTTC 1 cut(s) 1205
SaqAI TTAA 8 cut(s) 255, 339, 366, 918, 990, 1100, 1202, 1266
SatI GCNGC 7 cut(s) 90, 194, 239, 527, 546, 549, 552
Sau3AI GATC 8 cut(s) 210, 330, 531, 822, 859, 895, 1306, 1348
Sau96I GGNCC 2 cut(s) 792, 812
SchI GAGTC 4 cut(s) 437, 622, 673, 1316
ScrFI CCNGG 2 cut(s) 1107, 1108
SfaNI GCATC 5 cut(s) 479, 1012, 1183, 1433, 1435
SinI GGWCC 2 cut(s) 792, 812
SmaI CCCGGG 1 cut(s) 1108
SmiMI CAYNNNNRTG 2 cut(s) 423, 833
SmlI CTYRAG 1 cut(s) 1003
SmoI CTYRAG 1 cut(s) 1003
SphI GCATGC 1 cut(s) 545
Sse9I AATT 9 cut(s) 181, 221, 268, 299, 626, 635, 709, 715, 1197
SsiI CCGC 2 cut(s) 66, 484
SspMI CTAG 5 cut(s) 287, 555, 944, 1163, 1181
StyD4I CCNGG 2 cut(s) 1105, 1106
StyI CCWWGG 4 cut(s) 75, 783, 1256, 1273
TaaI ACNGT 3 cut(s) 40, 845, 1148
TaiI ACGT 1 cut(s) 512
TaqI TCGA 1 cut(s) 591
TaqII GACCGA 1 cut(s) 800
TasI AATT 9 cut(s) 181, 221, 268, 299, 626, 635, 709, 715, 1197
TatI WGTACW 2 cut(s) 49, 1170
TfiI GAWTC 2 cut(s) 227, 695
Tru1I TTAA 8 cut(s) 255, 339, 366, 918, 990, 1100, 1202, 1266
Tru9I TTAA 8 cut(s) 255, 339, 366, 918, 990, 1100, 1202, 1266
TscAI CASTG 3 cut(s) 52, 467, 676
TseFI GTSAC 3 cut(s) 154, 671, 835
TseI GCWGC 7 cut(s) 89, 193, 238, 526, 545, 548, 551
Tsp45I GTSAC 3 cut(s) 154, 671, 835
TspDTI ATGAA 5 cut(s) 20, 155, 281, 1173, 1413
TspGWI ACGGA 1 cut(s) 149
TspMI CCCGGG 1 cut(s) 1106
TspRI CASTG 3 cut(s) 52, 467, 676
VpaK11BI GGWCC 2 cut(s) 792, 812
XapI RAATTY 4 cut(s) 268, 299, 626, 635
XceI RCATGY 3 cut(s) 155, 494, 545
XmaI CCCGGG 1 cut(s) 1106
XspI CTAG 5 cut(s) 287, 555, 944, 1163, 1181
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.