Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0004365

Physical Location & Seq

Genomic Coordinates Reverse (-)

18663668 .. 18667016

Gene Structure 3349 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000023132

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1674 bp

ATGCGTTGGAGATTCAGTTCTAATTCCGATAGCCGCCGTGGTGGTGGAGAGAGGGAGTACTTCGCCGGTGAGAGAGAAAGGGAGTATTTCGCCGCCGCACCCTTCAACACCTCTTCGCCTCTTTTCGCAATGGATATAGATACGGGTATGTTTACGGTTCCTCAAACTGTTGGCAGCGTACTGTGTTGCAAATGTGGTATTCCCATGGCACCAAATGCTGCCAATATGTGCGTCAAGTGTTTGCGCTCTGAAGTTGACATTACTGAAGGTTTGCAGAAGCATGTGACTATTGTGCATTGCCCCGAATGTGATACCTACTTGCAGCCTCCGAGAACTTGGATTAAGGCCCAACTAGAATCGAAGGAGCTGCTAACTTTCTGTGTGAAGAGACTGAAGAACTTGAATAAAATTAGGTTGGTTCATGCCGAATTCATTTGGACTGAACCTCACTCCAAGAGGATCAAGGTTAAGTTGGTAGTTCAGAAGGAAGTTCTTAATGGAGCAATACTTGAGCAATCGTATACTGTTGAGTATGTTCAGCAAGAACATATGTGTGAGTCTTGTGCAAGAGTCCAAGCCAACCCTGACCAGTGGGTTGCAGCTGTACAGCTTCGCCAGCATGTTTCTCACAGACGCACTTTTTTCTATCTGGAGCAGCTGATTCTGAAGCATGGTGCTGCTGCCAGTGCCATAAAGATTACGCAGATGGACCAGGGTATCGATTTCTTTTTCTCAAACCGGAGTCATGGTGTGAAATTTGTGGAGTTTGTGGGTAAAGTTGCTCCAGTAAGGAGTCGTAATGACAAACAGCTGGTTTCCCAGGATTCTAAGAGTAATACTTATCATTACAAGTATACATTCTCAGTTGAAATCTCCCCCATTTGCCGTGAGGATTTGATCTGTCTGCCTCCCAAGGTTAGATCTAGTTTTGGGAATCTTGGTCCTCTAGTGATTTGCACTAAAGTGACTAACAGCATTGCTTTGCTTGATCCTTTGACCTTGAGGCATTGTTTCTTGGATGCTGATCAATATTGGAGGACAAGCTTTAAGTCGCTACATACGAGCCGGGAGTTAGTGGAGTATATAGTGCTCGATGTAGAGATGGTTTCATCTGAAGTTAATGTTGGTGGCACAAGGTATGCTTTCGCTGATGCACAGGTTGCCCGTGTGTCTGATTTTGGGAAGAATGACACTATTTTCAACATAAAAACGCATATAGGCCATCTTTTAAACCCTGGGGATTATGCTCTTGGTTATGACTTATATGGGGCAAACAGTAATGACGAGGAACTAGACAAGTATAAGGGTCTAGTCATTCCAGATGTAATTTTGATAAAGAAGAGCTATGAAGAAAAGCGCCTGAAGAAGCGTGCAAAGCCTCGTGCATGGAAGCTTAAATCCCTTGCCATGGAAGTGGATGCTAAAGGTAGAGGCGCGCTAGAAAAGGAGGCCTCAGAGTATGAACAGTTCTTGAAAGATCTGGAAGAGAACCCTGATTACAGGTTCAATATTGATTTGTACCGTGATGAAGGATACCAGCCATCAGAGAAGGCATCTGTGACCGATGGGGAAGATGCACCTTCTGTGCCCTTTGATGAGTTGCTTGCCGACATGGATAACCTCCAATTAAGAGAGTATGAAGATGATGAGGACGTTGGCAGCATGAGGGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03008 ko03013 map03008 map03013

Pfam Domains

Protein Families

NMD3

Protein Analysis

558

Amino Acids

63.58

Weight (kDa)

6.03

Isoelectric Point (pI)

39.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NMD3	PF04981	62 - 291	2.5e-76	NMD3 family
NMD_SH3	PF21193	294 - 338	1.3e-17	NMD3 SH3 domain
OB_NMD3	PF21192	358 - 447	1.6e-30	NMD3 OB-fold domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004365)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G03820
fragaria_vesca	FvH4_1g26190 FvH4_1g26190 FvH4_4g00390 FvH4_4g00390
prunus_persica	Prupe.4G217800_v2.0.a1 Prupe.4G217800_v2.0.a1 Prupe.4G273200_v2.0.a1
pyrus_communis	pycom04g00430
rosa_chinensis	RchiOBHm_Chr3g0485681 RchiOBHm_Chr3g0485701 RchiOBHm_Chr4g0385341
rosa_laevigata	RLG00000010236 RLG00000023132
rosa_multiflora	Rmu_sc0001259.1_g000008 Rmu_sc0003005.1_g000028
rosa_roxburghii	Rroxscaffold_5G00333270 Rroxscaffold_6G00396510 Rroxscaffold_6G00396820 Rroxscaffold_6G00396840
rosa_rugosa	Rorug03G0220700 Rorug03G0300500
rosa_samantha	Rh3AG269900 Rh3BG305700 Rh3CG303800 Rh3DG300100 Rh4AG004200 Rh4BG003600 Rh4CG005300 Rh4DG003800
rosa_wichuraiana	Rw3G024040 Rw4G000480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	208
AccI	GTMKAC	2 cut(s)	521, 854
AccII	CGCG	1 cut(s)	1436
AciI	CCGC	3 cut(s)	34, 93, 96
AclWI	GGATC	2 cut(s)	467, 983
AcsI	RAATTY	2 cut(s)	428, 755
AcuI	CTGAAG	6 cut(s)	270, 285, 413, 686, 1134, 1382
AfaI	GTAC	4 cut(s)	59, 180, 606, 1520
AfiI	CCNNNNNNNGG	1 cut(s)	1408
AgsI	TTSAA	6 cut(s)	106, 403, 869, 1201, 1474, 1507
AjnI	CCWGG	3 cut(s)	711, 819, 1234
AjuI	GAANNNNNNNTTGG	2 cut(s)	1107, 1139
AleI	CACNNNNGTG	1 cut(s)	962
AloI	GAACNNNNNNTCC	1 cut(s)	33
AluBI	AGCT	8 cut(s)	367, 602, 610, 658, 811, 1044, 1344, 1393
AluI	AGCT	8 cut(s)	367, 602, 610, 658, 811, 1044, 1344, 1393
Alw21I	GWGCWC	1 cut(s)	1092
Alw26I	GTCTC	1 cut(s)	382
AlwI	GGATC	2 cut(s)	467, 983
AoxI	GGCC	3 cut(s)	345, 1219, 1449
ApeKI	GCWGC	9 cut(s)	174, 218, 322, 367, 599, 655, 677, 680, 1659
ApoI	RAATTY	2 cut(s)	428, 755
AspLEI	GCGC	4 cut(s)	246, 1359, 1436, 1438
AspS9I	GGNCC	3 cut(s)	346, 709, 941
AsuC2I	CCSGG	1 cut(s)	1067
AsuHPI	GGTGA	1 cut(s)	80
AvaII	GGWCC	2 cut(s)	709, 941
BaeGI	GKGCMC	1 cut(s)	1590
BaeI	ACNNNNGTAYC	2 cut(s)	700, 733
BanI	GGYRCC	1 cut(s)	208
BauI	CACGAG	1 cut(s)	1380
Bbv12I	GWGCWC	1 cut(s)	1092
BbvI	GCAGC	8 cut(s)	186, 205, 334, 354, 611, 664, 667, 667
BccI	CCATC	5 cut(s)	700, 1096, 1230, 1549, 1559
BceAI	ACGGC	2 cut(s)	21, 870
BcgI	CGANNNNNNTGC	2 cut(s)	349, 383
BciT130I	CCWGG	3 cut(s)	713, 821, 1236
BciVI	GTATCC	1 cut(s)	1526
BclI	TGATCA	1 cut(s)	1024
BcnI	CCSGG	1 cut(s)	1067
BcoDI	GTCTC	1 cut(s)	382
BfaI	CTAG	6 cut(s)	353, 924, 947, 1292, 1310, 1439
BfoI	RGCGCY	1 cut(s)	1360
BfuI	GTATCC	1 cut(s)	1526
BglII	AGATCT	2 cut(s)	920, 1477
BmcAI	AGTACT	1 cut(s)	59
Bme1390I	CCNGG	4 cut(s)	713, 821, 1067, 1236
Bme18I	GGWCC	2 cut(s)	709, 941
BmgT120I	GGNCC	3 cut(s)	346, 709, 941
BmiI	GGNNCC	2 cut(s)	159, 210
BmrFI	CCNGG	4 cut(s)	713, 821, 1067, 1236
BmsI	GCATC	5 cut(s)	1009, 1141, 1408, 1562, 1564
BpmI	CTGGAG	2 cut(s)	671, 768
BpuEI	CTTGAG	2 cut(s)	530, 1021
BpuMI	CCSGG	1 cut(s)	1067
Bsa29I	ATCGAT	1 cut(s)	720
BsaBI	GATNNNNATC	1 cut(s)	1023
BsaJI	CCNNGG	8 cut(s)	37, 204, 712, 819, 912, 1234, 1235, 1407
BsaWI	WCCGGW	1 cut(s)	738
BsaXI	ACNNNNNCTCC	3 cut(s)	31, 733, 763
Bsc4I	CCNNNNNNNGG	1 cut(s)	1408
Bse118I	RCCGGY	1 cut(s)	65
Bse1I	ACTGG	3 cut(s)	589, 684, 785
Bse3DI	GCAATG	3 cut(s)	135, 295, 975
Bse8I	GATNNNNATC	1 cut(s)	1023
BseBI	CCWGG	3 cut(s)	713, 821, 1236
BseCI	ATCGAT	1 cut(s)	720
BseDI	CCNNGG	8 cut(s)	37, 204, 712, 819, 912, 1234, 1235, 1407
BseGI	GGATG	2 cut(s)	1024, 1423
BseJI	GATNNNNATC	1 cut(s)	1023
BseLI	CCNNNNNNNGG	1 cut(s)	1408
BseMI	GCAATG	3 cut(s)	135, 295, 975
BseMII	CTCAG	2 cut(s)	876, 1467
BseNI	ACTGG	3 cut(s)	589, 684, 785
BsePI	GCGCGC	1 cut(s)	1434
BseSI	GKGCMC	1 cut(s)	1590
BseXI	GCAGC	8 cut(s)	186, 205, 334, 354, 611, 664, 667, 667
Bsh1236I	CGCG	1 cut(s)	1436
BshFI	GGCC	3 cut(s)	347, 1221, 1451
BshNI	GGYRCC	1 cut(s)	208
BshVI	ATCGAT	1 cut(s)	720
BsiHKAI	GWGCWC	1 cut(s)	1092
BsiSI	CCGG	3 cut(s)	66, 739, 1066
BslI	CCNNNNNNNGG	1 cut(s)	1408
BsmAI	GTCTC	1 cut(s)	382
BsnI	GGCC	3 cut(s)	347, 1221, 1451
Bsp1286I	GDGCHC	2 cut(s)	1092, 1590
Bsp1407I	TGTACA	1 cut(s)	604
Bsp143I	GATC	6 cut(s)	459, 897, 920, 988, 1024, 1477
Bsp19I	CCATGG	2 cut(s)	204, 1407
BspACI	CCGC	3 cut(s)	34, 93, 96
BspANI	GGCC	3 cut(s)	347, 1221, 1451
BspCNI	CTCAG	2 cut(s)	875, 1466
BspDI	ATCGAT	1 cut(s)	720
BspFNI	CGCG	1 cut(s)	1436
BspLI	GGNNCC	2 cut(s)	159, 210
BspPI	GGATC	2 cut(s)	467, 983
BspQI	GCTCTTC	1 cut(s)	1334
BspT107I	GGYRCC	1 cut(s)	208
BsrDI	GCAATG	3 cut(s)	135, 295, 975
BsrFI	RCCGGY	1 cut(s)	65
BsrGI	TGTACA	1 cut(s)	604
BsrI	ACTGG	3 cut(s)	589, 684, 785
BssAI	RCCGGY	1 cut(s)	65
BssECI	CCNNGG	8 cut(s)	37, 204, 712, 819, 912, 1234, 1235, 1407
BssHII	GCGCGC	1 cut(s)	1434
BssMI	GATC	6 cut(s)	459, 897, 920, 988, 1024, 1477
BssNAI	GTATAC	2 cut(s)	522, 855
BssSI	CACGAG	1 cut(s)	1380
BssT1I	CCWWGG	3 cut(s)	204, 912, 1407
Bst1107I	GTATAC	2 cut(s)	522, 855
Bst2BI	CACGAG	1 cut(s)	1380
Bst2UI	CCWGG	3 cut(s)	713, 821, 1236
Bst4CI	ACNGT	7 cut(s)	157, 169, 183, 526, 1277, 1467, 1523
Bst6I	CTCTTC	4 cut(s)	118, 380, 1334, 1479
BstAPI	GCANNNNNTGC	2 cut(s)	215, 1160
BstAUI	TGTACA	1 cut(s)	604
BstC8I	GCNNGC	4 cut(s)	617, 1371, 1436, 1605
BstDEI	CTNAG	3 cut(s)	828, 862, 1453
BstDSI	CCRYGG	3 cut(s)	37, 204, 1407
BstF5I	GGATG	2 cut(s)	1024, 1423
BstFNI	CGCG	1 cut(s)	1436
BstH2I	RGCGCY	1 cut(s)	1360
BstHHI	GCGC	4 cut(s)	246, 1359, 1436, 1438
BstKTI	GATC	6 cut(s)	462, 900, 923, 991, 1027, 1480
BstMAI	GTCTC	1 cut(s)	382
BstMBI	GATC	6 cut(s)	459, 897, 920, 988, 1024, 1477
BstMWI	GCNNNNNNNGC	5 cut(s)	215, 616, 686, 1160, 1375
BstNI	CCWGG	3 cut(s)	713, 821, 1236
BstNSI	RCATGY	2 cut(s)	284, 623
BstSCI	CCNGG	4 cut(s)	711, 819, 1065, 1234
BstSLI	GKGCMC	1 cut(s)	1590
BstUI	CGCG	1 cut(s)	1436
BstV1I	GCAGC	8 cut(s)	186, 205, 334, 354, 611, 664, 667, 667
BstX2I	RGATCY	2 cut(s)	920, 1477
BstXI	CCANNNNNNTGG	1 cut(s)	1414
BstYI	RGATCY	2 cut(s)	920, 1477
BstZ17I	GTATAC	2 cut(s)	522, 855
Bsu15I	ATCGAT	1 cut(s)	720
BsuI	GTATCC	1 cut(s)	1526
BsuRI	GGCC	3 cut(s)	347, 1221, 1451
BsuTUI	ATCGAT	1 cut(s)	720
BtgI	CCRYGG	3 cut(s)	37, 204, 1407
BtsCI	GGATG	2 cut(s)	1024, 1423
BtsIMutI	CAGTG	2 cut(s)	596, 691
Cac8I	GCNNGC	4 cut(s)	617, 1371, 1436, 1605
CfoI	GCGC	4 cut(s)	246, 1359, 1436, 1438
Cfr10I	RCCGGY	1 cut(s)	65
Cfr13I	GGNCC	3 cut(s)	346, 709, 941
ClaI	ATCGAT	1 cut(s)	720
CseI	GACGC	2 cut(s)	220, 642
Csp6I	GTAC	4 cut(s)	58, 179, 605, 1519
CviQI	GTAC	4 cut(s)	58, 179, 605, 1519
DdeI	CTNAG	3 cut(s)	828, 862, 1453
DpnI	GATC	6 cut(s)	461, 899, 922, 990, 1026, 1479
DpnII	GATC	6 cut(s)	459, 897, 920, 988, 1024, 1477
DraI	TTTAAA	1 cut(s)	1230
Eam1104I	CTCTTC	4 cut(s)	118, 380, 1334, 1479
EarI	CTCTTC	4 cut(s)	118, 380, 1334, 1479
Eco130I	CCWWGG	3 cut(s)	204, 912, 1407
Eco147I	AGGCCT	1 cut(s)	1451
Eco47I	GGWCC	2 cut(s)	709, 941
Eco57I	CTGAAG	6 cut(s)	270, 285, 413, 686, 1134, 1382
EcoRI	GAATTC	1 cut(s)	428
EcoRII	CCWGG	3 cut(s)	711, 819, 1234
EcoT14I	CCWWGG	3 cut(s)	204, 912, 1407
ErhI	CCWWGG	3 cut(s)	204, 912, 1407
FalI	AAGNNNNNCTT	2 cut(s)	1126, 1158
FauNDI	CATATG	1 cut(s)	549
FbaI	TGATCA	1 cut(s)	1024
FblI	GTMKAC	2 cut(s)	521, 854
FokI	GGATG	2 cut(s)	1031, 1430
FspBI	CTAG	6 cut(s)	353, 924, 947, 1292, 1310, 1439
GlaI	GCGC	4 cut(s)	245, 1358, 1435, 1437
GsuI	CTGGAG	2 cut(s)	671, 768
HaeII	RGCGCY	1 cut(s)	1360
HaeIII	GGCC	3 cut(s)	347, 1221, 1451
HapII	CCGG	3 cut(s)	66, 739, 1066
HgaI	GACGC	2 cut(s)	220, 642
HhaI	GCGC	4 cut(s)	246, 1359, 1436, 1438
Hin6I	GCGC	4 cut(s)	244, 1357, 1434, 1436
HinP1I	GCGC	4 cut(s)	244, 1357, 1434, 1436
HincII	GTYRAC	1 cut(s)	256
HindII	GTYRAC	1 cut(s)	256
HindIII	AAGCTT	2 cut(s)	1042, 1391
HinfI	GANTC	9 cut(s)	12, 356, 557, 570, 661, 742, 793, 824, 934
HpaII	CCGG	3 cut(s)	66, 739, 1066
HphI	GGTGA	1 cut(s)	80
Hpy166II	GTNNAC	4 cut(s)	153, 256, 522, 855
Hpy188I	TCNGA	9 cut(s)	28, 250, 330, 483, 666, 1114, 1174, 1456, 1546
Hpy188III	TCNNGA	4 cut(s)	650, 1319, 1471, 1481
Hpy8I	GTNNAC	4 cut(s)	153, 256, 522, 855
HpyAV	CCTTC	7 cut(s)	112, 260, 355, 478, 1523, 1543, 1590
HpyCH4III	ACNGT	7 cut(s)	157, 169, 183, 526, 1277, 1467, 1523
HpyCH4IV	ACGT	1 cut(s)	1653
HpyF10VI	GCNNNNNNNGC	5 cut(s)	215, 616, 686, 1160, 1375
HpyF3I	CTNAG	3 cut(s)	828, 862, 1453
HpySE526I	ACGT	1 cut(s)	1653
HspAI	GCGC	4 cut(s)	244, 1357, 1434, 1436
Ksp22I	TGATCA	1 cut(s)	1024
Kzo9I	GATC	6 cut(s)	459, 897, 920, 988, 1024, 1477
LguI	GCTCTTC	1 cut(s)	1334
LmnI	GCTCC	4 cut(s)	364, 500, 652, 787
Lsp1109I	GCAGC	8 cut(s)	186, 205, 334, 354, 611, 664, 667, 667
LweI	GCATC	5 cut(s)	1009, 1141, 1408, 1562, 1564
MaeI	CTAG	6 cut(s)	353, 924, 947, 1292, 1310, 1439
MaeII	ACGT	1 cut(s)	1653
MaeIII	GTNAC	3 cut(s)	283, 964, 1558
MalI	GATC	6 cut(s)	461, 899, 922, 990, 1026, 1479
MboI	GATC	6 cut(s)	459, 897, 920, 988, 1024, 1477
MflI	RGATCY	2 cut(s)	920, 1477
MhlI	GDGCHC	2 cut(s)	1092, 1590
MluCI	AATT	6 cut(s)	22, 408, 428, 755, 1326, 1625
MlyI	GAGTC	4 cut(s)	566, 579, 751, 802
MseI	TTAA	8 cut(s)	342, 468, 495, 1047, 1119, 1229, 1395, 1628
MslI	CAYNNNNRTG	3 cut(s)	552, 962, 1412
MspA1I	CMGCKG	3 cut(s)	602, 658, 811
MspI	CCGG	3 cut(s)	66, 739, 1066
MspR9I	CCNGG	4 cut(s)	713, 821, 1067, 1236
MvaI	CCWGG	3 cut(s)	713, 821, 1236
MvnI	CGCG	1 cut(s)	1436
MwoI	GCNNNNNNNGC	5 cut(s)	215, 616, 686, 1160, 1375
NciI	CCSGG	1 cut(s)	1067
NcoI	CCATGG	2 cut(s)	204, 1407
NdeI	CATATG	1 cut(s)	549
NdeII	GATC	6 cut(s)	459, 897, 920, 988, 1024, 1477
NlaIV	GGNNCC	2 cut(s)	159, 210
NmuCI	GTSAC	3 cut(s)	283, 964, 1558
NspI	RCATGY	2 cut(s)	284, 623
OliI	CACNNNNGTG	1 cut(s)	962
PasI	CCCWGGG	1 cut(s)	1235
PauI	GCGCGC	1 cut(s)	1434
PceI	AGGCCT	1 cut(s)	1451
PciSI	GCTCTTC	1 cut(s)	1334
PcsI	WCGNNNNNNNCGW	1 cut(s)	1058
PfeI	GAWTC	5 cut(s)	12, 356, 661, 824, 934
PleI	GAGTC	4 cut(s)	565, 578, 750, 801
PpsI	GAGTC	4 cut(s)	565, 578, 750, 801
Psp6I	CCWGG	3 cut(s)	711, 819, 1234
PspGI	CCWGG	3 cut(s)	711, 819, 1234
PspN4I	GGNNCC	2 cut(s)	159, 210
PspPI	GGNCC	3 cut(s)	346, 709, 941
PsrI	GAACNNNNNNTAC	4 cut(s)	1451, 1481, 1483, 1513
PsuI	RGATCY	2 cut(s)	920, 1477
PteI	GCGCGC	1 cut(s)	1434
PvuII	CAGCTG	3 cut(s)	602, 658, 811
RsaI	GTAC	4 cut(s)	59, 180, 606, 1520
RsaNI	GTAC	4 cut(s)	58, 179, 605, 1519
RseI	CAYNNNNRTG	3 cut(s)	552, 962, 1412
SapI	GCTCTTC	1 cut(s)	1334
SaqAI	TTAA	8 cut(s)	342, 468, 495, 1047, 1119, 1229, 1395, 1628
Sau3AI	GATC	6 cut(s)	459, 897, 920, 988, 1024, 1477
Sau96I	GGNCC	3 cut(s)	346, 709, 941
ScaI	AGTACT	1 cut(s)	59
SchI	GAGTC	4 cut(s)	566, 579, 751, 802
ScrFI	CCNGG	4 cut(s)	713, 821, 1067, 1236
SduI	GDGCHC	2 cut(s)	1092, 1590
SfaNI	GCATC	5 cut(s)	1009, 1141, 1408, 1562, 1564
SgrAI	CRCCGGYG	1 cut(s)	65
SinI	GGWCC	2 cut(s)	709, 941
SmiMI	CAYNNNNRTG	3 cut(s)	552, 962, 1412
SmlI	CTYRAG	2 cut(s)	509, 1000
SmoI	CTYRAG	2 cut(s)	509, 1000
Sse9I	AATT	6 cut(s)	22, 408, 428, 755, 1326, 1625
SseBI	AGGCCT	1 cut(s)	1451
SsiI	CCGC	3 cut(s)	34, 93, 96
SspI	AATATT	2 cut(s)	1031, 1510
SspMI	CTAG	6 cut(s)	353, 924, 947, 1292, 1310, 1439
StuI	AGGCCT	1 cut(s)	1451
StyD4I	CCNGG	4 cut(s)	711, 819, 1065, 1234
StyI	CCWWGG	3 cut(s)	204, 912, 1407
TaaI	ACNGT	7 cut(s)	157, 169, 183, 526, 1277, 1467, 1523
TaiI	ACGT	1 cut(s)	1656
TaqI	TCGA	3 cut(s)	359, 720, 1092
TaqII	GACCGA	1 cut(s)	1577
TasI	AATT	6 cut(s)	22, 408, 428, 755, 1326, 1625
TatI	WGTACW	2 cut(s)	57, 604
TauI	GCSGC	3 cut(s)	36, 95, 98
TfiI	GAWTC	5 cut(s)	12, 356, 661, 824, 934
Tru1I	TTAA	8 cut(s)	342, 468, 495, 1047, 1119, 1229, 1395, 1628
Tru9I	TTAA	8 cut(s)	342, 468, 495, 1047, 1119, 1229, 1395, 1628
TscAI	CASTG	2 cut(s)	596, 691
TseFI	GTSAC	3 cut(s)	283, 964, 1558
TseI	GCWGC	9 cut(s)	174, 218, 322, 367, 599, 655, 677, 680, 1659
Tsp45I	GTSAC	3 cut(s)	283, 964, 1558
TspDTI	ATGAA	7 cut(s)	410, 421, 1098, 1362, 1476, 1542, 1653
TspRI	CASTG	2 cut(s)	596, 691
VpaK11BI	GGWCC	2 cut(s)	709, 941
XapI	RAATTY	2 cut(s)	428, 755
XceI	RCATGY	2 cut(s)	284, 623
XmiI	GTMKAC	2 cut(s)	521, 854
XspI	CTAG	6 cut(s)	353, 924, 947, 1292, 1310, 1439
ZrmI	AGTACT	1 cut(s)	59

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.