Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0004365

Physical Location & Seq

Genomic Coordinates Forward (+)

703754 .. 705418

Gene Structure 1665 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00333270.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1410 bp

ATGAGCCAACTCTCTTGCCCCGCAATGGCTGAAGAAGCAGGTGGTATGTTCGTGGTTCAGCAAACTGTTGGCAGCGTGCTGTGTTGCAAGTGTGGTGTCTCCATGACACCCAATGCTGCCAATATGTGCGTCAAGTGTTTGCGCTCCGAGGTTGATATCACCCAAGGTTTGCAGAAGCAGGTGACCATTCTCCATTGCCCCGAGTGTGAGACCTACTTGCAGCCTCCAAGAACATGGATCAAAGCCCAATTAGAGTCCAAGGAGCTGCTAGCCTTCTGTATTAGGAGAGTGAAGAACTTGAACAAAGTTAAGTTGGTTCATGCCGAATTTATTTGGACCGAGCCTCACTCCAAGAGGATCAAGGTGAAACTGAAAGTTCAGAAAGAGGTTTTGAATGGAGCACTACTTGAACAGTCTTTTGTTGTGGAGTATGTTCAGCAAGAACATATGTGTGAACCTTGTTCCAGGGCCCAGGCTAACCCTGACCAGTGGGTTGCATCTGTGCAACTCCGCCAGCATGTTTCTCACAAACGCACCTTTTTCTTTCTCGAGCAGCTGATTCTCAAGCATGGTGCTGCTGCCAGTGCCATAAGGATTAAGGAGACAGATAAAGGGATCGACTTCTTTTTCCAAGCCGGAGATTTGATTTGTCTGCCTCCCAAGGTCAAATCTAGTTTGGGTAATCTTGGTCCTCTTGTGATCTGCACCAAAGTAACCAACAGTATTGCGTTGCTTGATCCTTTCACCTTGAGGCATGGTTTCTTGGATACTGATCAGTATTGGAGGTCATCCTTTAAGTCTCTTCATACGAGCAGGGAGCTAGTGGAGTATATAGTGCTGGATGTGGAGGTTGTTTCGCCTGAAGTTACTATTGGTGGCTCGAGGTATGCTCTAGCTGATGCACAAGTTGCTCGCCTGTCTGACTTTGGGAAGAATGACACTATTTTCAACATAAAAACACATCTAGGCCATCTTTTAAGTCCTGGGGATTATGCTCTTGGTTATGACTTATATGGGGCTAATAGTAATGATGACGAACTGGAGAAGTACAAGGGTCTGGTCATTCCAGAAGCAATTTTGGTAAAGAAGAGCTATGAAGAAAAGCATCAGAAGAAGCGTGGGAAGCCTCGCTCGTGGAAGCTTAAGTCCCTCAACATGGAAGTTGACGATAAAGGTAGAGGTGAGCAAGAAAAGGTGGACTCGGAGTATGAACAGTTCTTGGATGATCTGGAGGAGAACCCTGAAATGAGGTTCAATGTATCACTGTACCACAATGAAGAATACCAAAAGCCATCAGAGACTACATCAGTGACTGATGGGGAAGATCTACCTTCTGTACCACTTGAGGAGTTGCTTGGTGACCTTGGACTAGGTGAGGCCGAAGTTAGGGACAGCAGCATGAGGAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03008 ko03013 map03008 map03013

Pfam Domains

Protein Families

NMD3

Protein Analysis

469

Amino Acids

52.93

Weight (kDa)

5.88

Isoelectric Point (pI)

38.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NMD3	PF04981	28 - 211	3.2e-59	NMD3 family
NMD_SH3	PF21193	214 - 252	1e-14	NMD3 SH3 domain
OB_NMD3	PF21192	274 - 363	8.3e-30	NMD3 OB-fold domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004365)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G03820
fragaria_vesca	FvH4_1g26190 FvH4_1g26190 FvH4_4g00390 FvH4_4g00390
prunus_persica	Prupe.4G217800_v2.0.a1 Prupe.4G217800_v2.0.a1 Prupe.4G273200_v2.0.a1
pyrus_communis	pycom04g00430
rosa_chinensis	RchiOBHm_Chr3g0485681 RchiOBHm_Chr3g0485701 RchiOBHm_Chr4g0385341
rosa_laevigata	RLG00000010236 RLG00000023132
rosa_multiflora	Rmu_sc0001259.1_g000008 Rmu_sc0003005.1_g000028
rosa_roxburghii	Rroxscaffold_5G00333270 Rroxscaffold_6G00396510 Rroxscaffold_6G00396820 Rroxscaffold_6G00396840
rosa_rugosa	Rorug03G0220700 Rorug03G0300500
rosa_samantha	Rh3AG269900 Rh3BG305700 Rh3CG303800 Rh3DG300100 Rh4AG004200 Rh4BG003600 Rh4CG005300 Rh4DG003800
rosa_wichuraiana	Rw3G024040 Rw4G000480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	29, 169
Acc36I	ACCTGC	2 cut(s)	29, 169
AciI	CCGC	2 cut(s)	21, 511
AclWI	GGATC	4 cut(s)	245, 365, 623, 731
AcsI	RAATTY	1 cut(s)	326
AcuI	CTGAAG	2 cut(s)	51, 882
AfaI	GTAC	3 cut(s)	1049, 1268, 1338
AfiI	CCNNNNNNNGG	3 cut(s)	25, 1156, 1386
AflII	CTTAAG	1 cut(s)	1142
AgsI	TTSAA	5 cut(s)	301, 394, 410, 949, 1255
AjnI	CCWGG	3 cut(s)	464, 471, 982
AjuI	GAANNNNNNNTTGG	2 cut(s)	855, 887
AluBI	AGCT	6 cut(s)	265, 556, 820, 896, 1092, 1141
AluI	AGCT	6 cut(s)	265, 556, 820, 896, 1092, 1141
Alw21I	GWGCWC	1 cut(s)	403
Alw26I	GTCTC	5 cut(s)	103, 203, 596, 804, 1292
AlwI	GGATC	4 cut(s)	245, 365, 623, 731
AlwNI	CAGNNNCTG	1 cut(s)	1313
Ama87I	CYCGRG	3 cut(s)	200, 548, 880
AoxI	GGCC	3 cut(s)	468, 967, 1377
ApaI	GGGCCC	1 cut(s)	472
ApeKI	GCWGC	8 cut(s)	72, 116, 220, 265, 553, 575, 578, 1395
ApoI	RAATTY	1 cut(s)	326
AspLEI	GCGC	1 cut(s)	144
AspS9I	GGNCC	4 cut(s)	336, 468, 469, 689
AsuHPI	GGTGA	7 cut(s)	151, 193, 376, 736, 1193, 1370, 1385
AsuNHI	GCTAGC	1 cut(s)	268
AvaI	CYCGRG	3 cut(s)	200, 548, 880
AvaII	GGWCC	2 cut(s)	336, 689
BaeGI	GKGCMC	1 cut(s)	472
BanII	GRGCYC	1 cut(s)	472
BauI	CACGAG	1 cut(s)	1132
Bbv12I	GWGCWC	1 cut(s)	403
BbvI	GCAGC	7 cut(s)	84, 103, 232, 252, 562, 565, 565
BccI	CCATC	3 cut(s)	978, 1300, 1310
BciT130I	CCWGG	3 cut(s)	466, 473, 984
BciVI	GTATCC	1 cut(s)	760
BclI	TGATCA	1 cut(s)	772
BcoDI	GTCTC	5 cut(s)	103, 203, 596, 804, 1292
BfaI	CTAG	6 cut(s)	269, 672, 821, 893, 965, 1370
BfrI	CTTAAG	1 cut(s)	1142
BfuAI	ACCTGC	2 cut(s)	29, 169
BfuI	GTATCC	1 cut(s)	760
BglII	AGATCT	1 cut(s)	1324
BisI	GCNGC	8 cut(s)	73, 117, 221, 266, 554, 576, 579, 1396
BlsI	GCNGC	8 cut(s)	74, 118, 222, 267, 555, 577, 580, 1397
Bme1390I	CCNGG	3 cut(s)	466, 473, 984
Bme18I	GGWCC	2 cut(s)	336, 689
BmeT110I	CYCGRG	3 cut(s)	200, 548, 880
BmgT120I	GGNCC	4 cut(s)	336, 468, 469, 689
BmiI	GGNNCC	1 cut(s)	470
BmrFI	CCNGG	3 cut(s)	466, 473, 984
BmsI	GCATC	3 cut(s)	506, 889, 1114
BmtI	GCTAGC	1 cut(s)	272
BplI	GAGNNNNNCTC	4 cut(s)	332, 364, 874, 906
BpmI	CTGGAG	2 cut(s)	1061, 1250
BpuEI	CTTGAG	3 cut(s)	548, 769, 1364
BsaBI	GATNNNNATC	1 cut(s)	771
BsaI	GGTCTC	1 cut(s)	203
BsaJI	CCNNGG	8 cut(s)	147, 163, 258, 465, 471, 660, 983, 1363
Bsc4I	CCNNNNNNNGG	3 cut(s)	25, 1156, 1386
Bse1I	ACTGG	3 cut(s)	487, 582, 1044
Bse3DI	GCAATG	2 cut(s)	30, 193
Bse8I	GATNNNNATC	1 cut(s)	771
BseBI	CCWGG	3 cut(s)	466, 473, 984
BseDI	CCNNGG	8 cut(s)	147, 163, 258, 465, 471, 660, 983, 1363
BseGI	GGATG	3 cut(s)	788, 847, 1228
BseJI	GATNNNNATC	1 cut(s)	771
BseLI	CCNNNNNNNGG	3 cut(s)	25, 1156, 1386
BseMI	GCAATG	2 cut(s)	30, 193
BseNI	ACTGG	3 cut(s)	487, 582, 1044
BseRI	GAGGAG	2 cut(s)	1247, 1361
BseSI	GKGCMC	1 cut(s)	472
BseXI	GCAGC	7 cut(s)	84, 103, 232, 252, 562, 565, 565
BsgI	GTGCAG	1 cut(s)	688
BshFI	GGCC	3 cut(s)	470, 969, 1379
BsiHKAI	GWGCWC	1 cut(s)	403
BsiHKCI	CYCGRG	3 cut(s)	200, 548, 880
BsiSI	CCGG	1 cut(s)	636
BslFI	GGGAC	2 cut(s)	1132, 1403
BslI	CCNNNNNNNGG	3 cut(s)	25, 1156, 1386
BsmAI	GTCTC	5 cut(s)	103, 203, 596, 804, 1292
BsmFI	GGGAC	2 cut(s)	1132, 1403
BsnI	GGCC	3 cut(s)	470, 969, 1379
Bso31I	GGTCTC	1 cut(s)	203
BsoBI	CYCGRG	3 cut(s)	200, 548, 880
Bsp120I	GGGCCC	1 cut(s)	468
Bsp1286I	GDGCHC	2 cut(s)	403, 472
Bsp143I	GATC	8 cut(s)	237, 357, 615, 699, 736, 772, 1225, 1324
BspACI	CCGC	2 cut(s)	21, 511
BspANI	GGCC	3 cut(s)	470, 969, 1379
BspLI	GGNNCC	1 cut(s)	470
BspMI	ACCTGC	2 cut(s)	29, 169
BspOI	GCTAGC	1 cut(s)	272
BspPI	GGATC	4 cut(s)	245, 365, 623, 731
BspQI	GCTCTTC	1 cut(s)	1082
BspTI	CTTAAG	1 cut(s)	1142
BspTNI	GGTCTC	1 cut(s)	203
BsrDI	GCAATG	2 cut(s)	30, 193
BsrI	ACTGG	3 cut(s)	487, 582, 1044
BssECI	CCNNGG	8 cut(s)	147, 163, 258, 465, 471, 660, 983, 1363
BssMI	GATC	8 cut(s)	237, 357, 615, 699, 736, 772, 1225, 1324
BssSI	CACGAG	1 cut(s)	1132
BssT1I	CCWWGG	4 cut(s)	163, 258, 660, 1363
Bst2BI	CACGAG	1 cut(s)	1132
Bst2UI	CCWGG	3 cut(s)	466, 473, 984
Bst4CI	ACNGT	5 cut(s)	67, 414, 722, 1215, 1266
Bst6I	CTCTTC	2 cut(s)	807, 1082
BstAFI	CTTAAG	1 cut(s)	1142
BstAPI	GCANNNNNTGC	1 cut(s)	908
BstC8I	GCNNGC	4 cut(s)	77, 270, 515, 913
BstEII	GGTNACC	2 cut(s)	181, 1358
BstF5I	GGATG	3 cut(s)	788, 847, 1228
BstHHI	GCGC	1 cut(s)	144
BstKTI	GATC	8 cut(s)	240, 360, 618, 702, 739, 775, 1228, 1327
BstMAI	GTCTC	5 cut(s)	103, 203, 596, 804, 1292
BstMBI	GATC	8 cut(s)	237, 357, 615, 699, 736, 772, 1225, 1324
BstMWI	GCNNNNNNNGC	4 cut(s)	35, 584, 908, 1123
BstNI	CCWGG	3 cut(s)	466, 473, 984
BstNSI	RCATGY	1 cut(s)	521
BstPI	GGTNACC	2 cut(s)	181, 1358
BstSCI	CCNGG	3 cut(s)	464, 471, 982
BstSLI	GKGCMC	1 cut(s)	472
BstV1I	GCAGC	7 cut(s)	84, 103, 232, 252, 562, 565, 565
BstX2I	RGATCY	1 cut(s)	1324
BstXI	CCANNNNNNTGG	1 cut(s)	234
BstYI	RGATCY	1 cut(s)	1324
BsuI	GTATCC	1 cut(s)	760
BsuRI	GGCC	3 cut(s)	470, 969, 1379
BtsCI	GGATG	3 cut(s)	788, 847, 1228
BtsIMutI	CAGTG	4 cut(s)	494, 589, 1262, 1314
BveI	ACCTGC	2 cut(s)	29, 169
Cac8I	GCNNGC	4 cut(s)	77, 270, 515, 913
CaiI	CAGNNNCTG	1 cut(s)	1313
CfoI	GCGC	1 cut(s)	144
Cfr13I	GGNCC	4 cut(s)	336, 468, 469, 689
CseI	GACGC	1 cut(s)	118
Csp6I	GTAC	3 cut(s)	1048, 1267, 1337
CviAII	CATG	8 cut(s)	103, 234, 320, 518, 569, 755, 1156, 1399
CviQI	GTAC	3 cut(s)	1048, 1267, 1337
DpnI	GATC	8 cut(s)	239, 359, 617, 701, 738, 774, 1227, 1326
DpnII	GATC	8 cut(s)	237, 357, 615, 699, 736, 772, 1225, 1324
Eam1104I	CTCTTC	2 cut(s)	807, 1082
EarI	CTCTTC	2 cut(s)	807, 1082
EciI	GGCGGA	1 cut(s)	500
Eco130I	CCWWGG	4 cut(s)	163, 258, 660, 1363
Eco24I	GRGCYC	1 cut(s)	472
Eco31I	GGTCTC	1 cut(s)	203
Eco32I	GATATC	1 cut(s)	157
Eco47I	GGWCC	2 cut(s)	336, 689
Eco57I	CTGAAG	2 cut(s)	51, 882
Eco88I	CYCGRG	3 cut(s)	200, 548, 880
Eco91I	GGTNACC	2 cut(s)	181, 1358
EcoO109I	RGGNCCY	1 cut(s)	468
EcoO65I	GGTNACC	2 cut(s)	181, 1358
EcoRII	CCWGG	3 cut(s)	464, 471, 982
EcoRV	GATATC	1 cut(s)	157
EcoT14I	CCWWGG	4 cut(s)	163, 258, 660, 1363
EcoT38I	GRGCYC	1 cut(s)	472
ErhI	CCWWGG	4 cut(s)	163, 258, 660, 1363
FaeI	CATG	8 cut(s)	106, 237, 323, 521, 572, 758, 1159, 1402
FaqI	GGGAC	2 cut(s)	1132, 1403
FatI	CATG	8 cut(s)	102, 233, 319, 517, 568, 754, 1155, 1398
FauI	CCCGC	1 cut(s)	28
FauNDI	CATATG	1 cut(s)	447
FbaI	TGATCA	1 cut(s)	772
Fnu4HI	GCNGC	8 cut(s)	73, 117, 221, 266, 554, 576, 579, 1396
FokI	GGATG	3 cut(s)	775, 854, 1235
FriOI	GRGCYC	1 cut(s)	472
Fsp4HI	GCNGC	8 cut(s)	73, 117, 221, 266, 554, 576, 579, 1396
FspBI	CTAG	6 cut(s)	269, 672, 821, 893, 965, 1370
GlaI	GCGC	1 cut(s)	143
GluI	GCNGC	8 cut(s)	73, 117, 221, 266, 554, 576, 579, 1396
GsuI	CTGGAG	2 cut(s)	1061, 1250
HaeIII	GGCC	3 cut(s)	470, 969, 1379
HapII	CCGG	1 cut(s)	636
HgaI	GACGC	1 cut(s)	118
HhaI	GCGC	1 cut(s)	144
Hin1II	CATG	8 cut(s)	106, 237, 323, 521, 572, 758, 1159, 1402
Hin6I	GCGC	1 cut(s)	142
HinP1I	GCGC	1 cut(s)	142
HincII	GTYRAC	1 cut(s)	1165
HindII	GTYRAC	1 cut(s)	1165
HindIII	AAGCTT	1 cut(s)	1139
HinfI	GANTC	3 cut(s)	254, 559, 1199
HpaII	CCGG	1 cut(s)	636
HphI	GGTGA	7 cut(s)	151, 193, 376, 736, 1193, 1370, 1385
Hpy166II	GTNNAC	3 cut(s)	455, 1165, 1198
Hpy188I	TCNGA	6 cut(s)	148, 381, 922, 1110, 1204, 1297
Hpy188III	TCNNGA	3 cut(s)	548, 1067, 1229
Hpy8I	GTNNAC	3 cut(s)	455, 1165, 1198
HpyAV	CCTTC	2 cut(s)	283, 1341
HpyCH4III	ACNGT	5 cut(s)	67, 414, 722, 1215, 1266
HpyCH4V	TGCA	7 cut(s)	87, 172, 220, 497, 505, 705, 902
HpyF10VI	GCNNNNNNNGC	4 cut(s)	35, 584, 908, 1123
Hsp92II	CATG	8 cut(s)	106, 237, 323, 521, 572, 758, 1159, 1402
HspAI	GCGC	1 cut(s)	142
Ksp22I	TGATCA	1 cut(s)	772
Kzo9I	GATC	8 cut(s)	237, 357, 615, 699, 736, 772, 1225, 1324
LguI	GCTCTTC	1 cut(s)	1082
LmnI	GCTCC	4 cut(s)	149, 262, 398, 817
Lsp1109I	GCAGC	7 cut(s)	84, 103, 232, 252, 562, 565, 565
LweI	GCATC	3 cut(s)	506, 889, 1114
MaeI	CTAG	6 cut(s)	269, 672, 821, 893, 965, 1370
MaeIII	GTNAC	5 cut(s)	181, 712, 865, 1309, 1358
MalI	GATC	8 cut(s)	239, 359, 617, 701, 738, 774, 1227, 1326
MboI	GATC	8 cut(s)	237, 357, 615, 699, 736, 772, 1225, 1324
MboII	GAAGA	9 cut(s)	44, 304, 794, 943, 1099, 1109, 1123, 1289, 1334
MflI	RGATCY	1 cut(s)	1324
MhlI	GDGCHC	2 cut(s)	403, 472
MluCI	AATT	3 cut(s)	248, 326, 1074
MlyI	GAGTC	2 cut(s)	263, 1193
MseI	TTAA	5 cut(s)	309, 597, 795, 977, 1143
MslI	CAYNNNNRTG	1 cut(s)	450
MspA1I	CMGCKG	1 cut(s)	556
MspCI	CTTAAG	1 cut(s)	1142
MspI	CCGG	1 cut(s)	636
MspR9I	CCNGG	3 cut(s)	466, 473, 984
MvaI	CCWGG	3 cut(s)	466, 473, 984
MwoI	GCNNNNNNNGC	4 cut(s)	35, 584, 908, 1123
NdeI	CATATG	1 cut(s)	447
NdeII	GATC	8 cut(s)	237, 357, 615, 699, 736, 772, 1225, 1324
NheI	GCTAGC	1 cut(s)	268
NlaIII	CATG	8 cut(s)	106, 237, 323, 521, 572, 758, 1159, 1402
NlaIV	GGNNCC	1 cut(s)	470
NmuCI	GTSAC	3 cut(s)	181, 1309, 1358
NspI	RCATGY	1 cut(s)	521
PaeR7I	CTCGAG	2 cut(s)	548, 880
PaqCI	CACCTGC	2 cut(s)	29, 169
PciSI	GCTCTTC	1 cut(s)	1082
PfeI	GAWTC	1 cut(s)	559
PkrI	GCNGC	8 cut(s)	74, 118, 222, 267, 555, 577, 580, 1397
PleI	GAGTC	2 cut(s)	262, 1193
PpsI	GAGTC	2 cut(s)	262, 1193
Psp6I	CCWGG	3 cut(s)	464, 471, 982
PspEI	GGTNACC	2 cut(s)	181, 1358
PspGI	CCWGG	3 cut(s)	464, 471, 982
PspN4I	GGNNCC	1 cut(s)	470
PspOMI	GGGCCC	1 cut(s)	468
PspPI	GGNCC	4 cut(s)	336, 468, 469, 689
PspXI	VCTCGAGB	1 cut(s)	880
PsrI	GAACNNNNNNTAC	2 cut(s)	1199, 1231
PstNI	CAGNNNCTG	1 cut(s)	1313
PsuI	RGATCY	1 cut(s)	1324
PvuII	CAGCTG	1 cut(s)	556
RsaI	GTAC	3 cut(s)	1049, 1268, 1338
RsaNI	GTAC	3 cut(s)	1048, 1267, 1337
RseI	CAYNNNNRTG	1 cut(s)	450
SapI	GCTCTTC	1 cut(s)	1082
SaqAI	TTAA	5 cut(s)	309, 597, 795, 977, 1143
SatI	GCNGC	8 cut(s)	73, 117, 221, 266, 554, 576, 579, 1396
Sau3AI	GATC	8 cut(s)	237, 357, 615, 699, 736, 772, 1225, 1324
Sau96I	GGNCC	4 cut(s)	336, 468, 469, 689
SchI	GAGTC	2 cut(s)	263, 1193
ScrFI	CCNGG	3 cut(s)	466, 473, 984
SduI	GDGCHC	2 cut(s)	403, 472
SfaNI	GCATC	3 cut(s)	506, 889, 1114
Sfr274I	CTCGAG	2 cut(s)	548, 880
SinI	GGWCC	2 cut(s)	336, 689
SlaI	CTCGAG	2 cut(s)	548, 880
SmiMI	CAYNNNNRTG	1 cut(s)	450
SmlI	CTYRAG	6 cut(s)	548, 563, 748, 880, 1142, 1343
SmoI	CTYRAG	6 cut(s)	548, 563, 748, 880, 1142, 1343
Sse9I	AATT	3 cut(s)	248, 326, 1074
SsiI	CCGC	2 cut(s)	21, 511
SspMI	CTAG	6 cut(s)	269, 672, 821, 893, 965, 1370
StyD4I	CCNGG	3 cut(s)	464, 471, 982
StyI	CCWWGG	4 cut(s)	163, 258, 660, 1363
TaaI	ACNGT	5 cut(s)	67, 414, 722, 1215, 1266
TaqI	TCGA	3 cut(s)	549, 618, 881
TaqII	GACCGA	1 cut(s)	353
TasI	AATT	3 cut(s)	248, 326, 1074
TatI	WGTACW	1 cut(s)	1047
TfiI	GAWTC	1 cut(s)	559
Tru1I	TTAA	5 cut(s)	309, 597, 795, 977, 1143
Tru9I	TTAA	5 cut(s)	309, 597, 795, 977, 1143
TscAI	CASTG	4 cut(s)	494, 589, 1269, 1314
TseFI	GTSAC	3 cut(s)	181, 1309, 1358
TseI	GCWGC	8 cut(s)	72, 116, 220, 265, 553, 575, 578, 1395
Tsp45I	GTSAC	3 cut(s)	181, 1309, 1358
TspDTI	ATGAA	5 cut(s)	308, 794, 1110, 1224, 1290
TspRI	CASTG	4 cut(s)	494, 589, 1269, 1314
Vha464I	CTTAAG	1 cut(s)	1142
VpaK11BI	GGWCC	2 cut(s)	336, 689
XapI	RAATTY	1 cut(s)	326
XceI	RCATGY	1 cut(s)	521
XhoI	CTCGAG	2 cut(s)	548, 880
XspI	CTAG	6 cut(s)	269, 672, 821, 893, 965, 1370

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.