Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0007117

Physical Location & Seq

Genomic Coordinates Reverse (-)

22669176 .. 22691047

Gene Structure 21872 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G273600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3261 bp

ATGAACAAAGGCATAAGCAGAAAACGGCCAGCGCCAACACAACAGCCGTCACCAGCGAACCCACCCAAGCAGCACGCCACGTCCCAAGAAGATGAATTTCTGGACGAGGACGTCTTCCTGGACGAAACCCTTTTCGAGACTGAAGACGACCTCATTCTTCGCGACATTGAAGAGCGCCAGTCCCTTGCTTCCCGCCTCACCAAATGGGCCCGCCCGTCTATCTCCCATGCCTACAGTTCCGCCTCCCGAAGCATCGCTTTTCAGCAATTGGAGATTGATTATGTTGTTGGAGATAGCAATAGAGAATTGTTGCCTAATTGGTCCGGGTCCGCTGCAATTATCCGAATTTTTGGGGTTACAAAGGAAGGACATAGTGTTTGCTGCCATGTTCATGGATTCGAGCCATATTTCTATATCAGCTGTCCTCCGGGAATGGGCCCTGACGATATTTCCAGGTTTCATCAAATTCTTGAGGGGAGAATGGGGGAGATGAATCGGAACAGTAAGGTACCAAAATTCATTCGCCATATTGAAATGGTGCAGAAGAGGAGTATCATGTATTACCAGCAGCAGGATTCTCATCCCTTCCTCAAAATTGTTGTTGCTTTGCCAACAATGGTGGCCAGCTGCCGGGGTATTCTTGATAGAGGCATACAAATTGATGGTCTTGGTATGAAGAGCTTCATGACATATGAAAGCAATGTTCTTTTTGCTCTTCGTTTCATGATTGATTGCAACATAGTTGGTGGAAATTGGATTGAGGTCCCTGCTGGAAGATATAAGACAGCGAAGCATTCATCGTACTGCCAATTAGAATTCGATTGCCTATTTTCAGACTTGATCAGCCATGCTCCAGAAGGGGAATTTTCGAAGATGGCTCCATTTCGCATATTGAGCTTTGACATTGAGTGTGCTGGCCGTAAAGGTCATTTTCCTGAGCCTACCCATGATCCTGTAATCCAGATTGCAAACCTAGTGACTTTGCAAGGAGAGAATCAGCCATTTATCCGTAATGTCATGACTCTCAAGTCATGCTCTCCTATAGTTGGTGTTGATGTGATGTCTTTTGATACAGAAAGAGAAGTCTTGCTGGCTTGGAGGGATTTAATCCGTGAGGTGGACCCAGATGTCATAATTGGATATAACATCTGTAAATTTGATTTGCCATATCTCATTGAGAGAGCTGAGACTTTGGGAATAGCTGAGTTTCCAATGCTTGGCCGCATAAAAAACAGCAGGGTTCGGGTCAAAGATACTACTTTTTCTTCAAGGCAGTATGGAACCAGGGAAAGTAAAGAAGTAACAGTTGAAGGGAGGGTTCAATTTGATTTATTCCAGGCTATGCAACGAGATTACAAATTAAGTTCTTATTCATTGAATTCTGTCTCGGCACACTTTCTTTCTGAGCAGAAAGAGGATGTCCACCATTCAATAATATCTGATCTTCAGAACGGCAATGCAGAAACTAGGAGGCGACTTGCTGTGTATTGTCTAAAGGATGCTTACCTCCCACAGAGGCTTTTGGACAAACTGATGTATATTTACAATTATGTAGAGATGGCTCGAGTGACAGGTGTTCCCATATCGTTTCTTCTATCCAGAGGGCAGAGCATCAAGGTGCTTTCTCAGCTTCTTAGGAAGGCAAAACAGAAGAACCTTCTTATTCCAAATGTCAAACAGGCTGGATCTGAGCAAGGGACATACGAAGGTGCCACTGTTTTGGAAGCAAAAGCAGGATTCTATGAAAAGCCAATTGCCACTTTGGATTTTGCATCTTTATATCCATCAATCATGATGGCCTATAATTTATGCTATTGCACTTTGGTGACAACTGAGGATGCTCGCAAACTCAACATCCCTCCAGAATTTGTCAACAAAACTCCATCTGGAGAAACATTTGTTAAATCCAATTTGCAGAAGGGAATACTTCCTGAAATTCTTGAAGAACTACTAGCTGCTCGTAAGAGAGCAAAGGCAGATTTAAAGGAAGCAAAAGATCCACTTGAGAAGGCAGTGCTTGATGGTCGACAACTGGCCTTAAAAATAAGTGCAAATTCTGTATATGGGTTTACTGGAGCTACTGTTGGTCAGTTACCATGCATAGAGATATCATCAAGTGTCACGAGCTATGGTCGACAGATGATTGAGCACACAAAAAATCTTGTAAAAGAAAAATTTACCATACTTAAAGGCTACGAACACAATGCTGAGGTTATATACGGGGACACAGACTCAGTTATGGTGCAATTCGGTGTGTCCACCGTTGAAGCAGCAATGAACCTGGGGAGAGAAGCTGCTGAATACATCAGTGGAACTTTCATAAAACCTATCAAGCTCGAGTTTGAGAAGGTTTATTATCCATATCTTCTGATTAGCAAGAAGAGATATGCTGGTTTATTGTGGACAAGTCCAGATAAGTTCGACAAGATGGATACTAAAGGTATTGAAACAGTACGAAGAGACAATTGCTTGTTGGTCAAAAACCTGGTAAATGAGTGCCTGCACAAAATACTGATTGACAGAGATATTCCTGGGGCAGTCCAGTATGTCAAGAATACAATCTCAGATCTTCTTATGAATCGCATGGATTTATCGCTTTTGGTTATCACTAAGGGTTTGACAAAAACTGGGGATGATTATGAAGTAAAGGCAGCTCATGTTGAACTTGCTGAACGTATGCGTAAGCGAGATGCTGCCACTGCTCCAAATGTTGGGGATCGAGTACCTTATGTCATTATTAAAGCTGCAAAAGGTGCCAAGGCATATGAGAAGTCAGAGGACCCCATCTATGTGCTCGAGAATAACATACCCATAGACCCTCAATACTACCTTGAAAATCAAATTAGCAAGCCACTTTTAAGAATTTTTGAGCCCATTTTGAAGAATGCTAGCAAGGAACTTCTTCATGGAAGTCACACAAGATCTATCTCAATATCTACTCCCTCAAACAGTGGAATAATGAAATTTGCAAAGAAACAACTCACTTGTGTTGGCTGCAAAGCTCTAATTAGCAACGCGGATCGAACTCTTTGCTCACACTGTAAGGGAAGAGAAGCTGAGCTCTATTGCAAAACAGTGGCTCATGTGTCTGAGCTAGAAACACTTTTTGGGCGGTTATGGACACAGTGCCAAGAGTGCCAAGGCTCTCTTCATCAAGATGTGCTCTGCACAAGTCGGGATTGCCCTATATTTTATAGGAGAAAGAAAGCACAGAAAGACATGGCTGAAGCCAAAGTGCAATTAGACCGATGGAGCTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0003674 GO:0003824 GO:0004518 GO:0004527 GO:0004529 GO:0004536 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005657 GO:0005694 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006281 GO:0006284 GO:0006287 GO:0006289 GO:0006297 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0008296 GO:0008408 GO:0009058 GO:0009059 GO:0009987 GO:0016787 GO:0016788 GO:0016796 GO:0016895 GO:0030894 GO:0031974 GO:0031981 GO:0032991 GO:0032993 GO:0033554 GO:0034641 GO:0034645 GO:0042575 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043596 GO:0043601 GO:0043625 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0045004 GO:0045005 GO:0046483 GO:0050896 GO:0051716 GO:0061695 GO:0070013 GO:0071704 GO:0090304 GO:0090305 GO:0140097 GO:1901360 GO:1901576 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko00230 ko00240 ko01100 ko03030 ko03410 ko03420 ko03430 ko03440 ko05166 map00230 map00240 map01100 map03030 map03410 map03420 map03430 map03440 map05166

Pfam Domains

Protein Families

DNA_pol_B DNA_pol_B_exo1 zf-C4pol

Protein Analysis

1087

Amino Acids

122.83

Weight (kDa)

8.2

Isoelectric Point (pI)

42.14

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007117)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G63960 AT5G63960
fragaria_vesca	FvH4_1g24660 FvH4_1g24660 FvH4_1g24660 FvH4_1g24660 FvH4_1g24660
malus_domestica	MD00G1053300.v1.1 MD05G1053800.v1.1 MD07G1029900.v1.1
prunus_persica	Prupe.4G273600_v2.0.a1 Prupe.4G273600_v2.0.a1 Prupe.4G273600_v2.0.a1
pyrus_communis	pycom01g00060 pycom07g02190
rosa_chinensis	RchiOBHm_Chr2g0122111
rosa_laevigata	RLG00000018650
rosa_multiflora	Rmu_co8081762.1_g000001
rosa_roxburghii	Rroxscaffold_2G00122010
rosa_rugosa	Rorug02G0236500
rosa_samantha	Rh2AG293000 Rh2BG303400 Rh2CG281900 Rh2DG317000
rosa_wichuraiana	Rw2G023500

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	110, 1027, 1127
AatII	GACGTC	1 cut(s)	114
Acc65I	GGTACC	1 cut(s)	508
AccB1I	GGYRCC	3 cut(s)	508, 1709, 2753
AccB7I	CCANNNNNTGG	2 cut(s)	1217, 2711
AccI	GTMKAC	2 cut(s)	2026, 2134
AccII	CGCG	2 cut(s)	162, 3017
AciI	CCGC	7 cut(s)	193, 211, 240, 330, 1222, 3017, 3112
AclWI	GGATC	5 cut(s)	944, 1693, 1991, 2724, 3027
AcoI	YGGCCR	4 cut(s)	26, 621, 916, 1219
AcuI	CTGAAG	3 cut(s)	162, 1430, 3246
AcyI	GRCGYC	1 cut(s)	111
AfaI	GTAC	4 cut(s)	510, 803, 2454, 2724
AfiI	CCNNNNNNNGG	7 cut(s)	434, 571, 630, 1046, 1117, 1217, 2711
AjiI	CACGTC	1 cut(s)	81
AjnI	CCWGG	7 cut(s)	117, 452, 1283, 1335, 2280, 2484, 2530
AjuI	GAANNNNNNNTTGG	4 cut(s)	3090, 3122, 3132, 3164
AleI	CACNNNNGTG	1 cut(s)	1823
Alw21I	GWGCWC	4 cut(s)	2151, 2796, 3063, 3165
Alw26I	GTCTC	4 cut(s)	131, 1181, 1390, 2454
AlwI	GGATC	5 cut(s)	944, 1693, 1991, 2724, 3027
Ama87I	CYCGRG	3 cut(s)	1563, 2336, 2795
AoxI	GGCC	8 cut(s)	26, 207, 436, 621, 916, 1219, 1797, 2034
ApaI	GGGCCC	2 cut(s)	211, 440
ArsI	GACNNNNNNTTYG	4 cut(s)	360, 392, 649, 681
Asp700I	GAANNNNTTC	2 cut(s)	680, 2901
Asp718I	GGTACC	1 cut(s)	508
AspLEI	GCGC	2 cut(s)	34, 177
AspS9I	GGNCC	9 cut(s)	207, 208, 321, 327, 436, 437, 763, 1120, 2779
AsuC2I	CCSGG	3 cut(s)	325, 429, 632
AsuHPI	GGTGA	3 cut(s)	42, 190, 1837
AsuII	TTCGAA	1 cut(s)	869
AsuNHI	GCTAGC	1 cut(s)	2888
AvaI	CYCGRG	3 cut(s)	1563, 2336, 2795
AvaII	GGWCC	5 cut(s)	321, 327, 763, 1120, 2779
BaeGI	GKGCMC	2 cut(s)	211, 440
BalI	TGGCCA	1 cut(s)	623
BanI	GGYRCC	3 cut(s)	508, 1709, 2753
BanII	GRGCYC	4 cut(s)	211, 440, 2874, 3063
BauI	CACGAG	1 cut(s)	2122
BbsI	GAAGAC	2 cut(s)	106, 150
Bbv12I	GWGCWC	4 cut(s)	2151, 2796, 3063, 3165
BbvCI	CCTCAGC	1 cut(s)	2208
BceAI	ACGGC	4 cut(s)	31, 41, 903, 1468
BcgI	CGANNNNNNTGC	4 cut(s)	2186, 2220, 3012, 3046
BciT130I	CCWGG	7 cut(s)	119, 454, 1285, 1337, 2282, 2486, 2532
BciVI	GTATCC	1 cut(s)	2425
BclI	TGATCA	1 cut(s)	840
BcnI	CCSGG	3 cut(s)	325, 429, 632
BcoDI	GTCTC	4 cut(s)	131, 1181, 1390, 2454
BfaI	CTAG	5 cut(s)	974, 1467, 1952, 2889, 3095
BfmI	CTRYAG	2 cut(s)	232, 1041
BfoI	RGCGCY	2 cut(s)	35, 178
BfuI	GTATCC	1 cut(s)	2425
BglII	AGATCT	2 cut(s)	2566, 2921
BlpI	GCTNAGC	1 cut(s)	3057
Bme18I	GGWCC	5 cut(s)	321, 327, 763, 1120, 2779
BmeT110I	CYCGRG	3 cut(s)	1563, 2336, 2795
BmgBI	CACGTC	1 cut(s)	81
BmgT120I	GGNCC	9 cut(s)	207, 208, 321, 327, 436, 437, 763, 1120, 2779
BmrI	ACTGGG	1 cut(s)	2637
BmsI	GCATC	6 cut(s)	261, 1489, 1620, 1781, 1828, 2680
BmtI	GCTAGC	1 cut(s)	2892
BmuI	ACTGGG	1 cut(s)	2637
BpiI	GAAGAC	2 cut(s)	106, 150
BpmI	CTGGAG	4 cut(s)	837, 1845, 1908, 2094
Bpu10I	CCTNAGC	2 cut(s)	936, 2208
Bpu1102I	GCTNAGC	1 cut(s)	3057
Bpu14I	TTCGAA	1 cut(s)	869
BpuEI	CTTGAG	3 cut(s)	491, 1010, 2024
BpuMI	CCSGG	3 cut(s)	325, 429, 632
BsaBI	GATNNNNATC	1 cut(s)	579
BsaHI	GRCGYC	1 cut(s)	111
BsaJI	CCNNGG	6 cut(s)	631, 1284, 2281, 2531, 2757, 3139
BsaXI	ACNNNNNCTCC	2 cut(s)	2067, 2097
Bsc4I	CCNNNNNNNGG	7 cut(s)	434, 571, 630, 1046, 1117, 1217, 2711
Bse1I	ACTGG	5 cut(s)	178, 2037, 2077, 2542, 2632
Bse3DI	GCAATG	3 cut(s)	706, 1462, 2280
Bse8I	GATNNNNATC	1 cut(s)	579
BseBI	CCWGG	7 cut(s)	119, 454, 1285, 1337, 2282, 2486, 2532
BseDI	CCNNGG	6 cut(s)	631, 1284, 2281, 2531, 2757, 3139
BseGI	GGATG	6 cut(s)	580, 1423, 1504, 1843, 1854, 2638
BseJI	GATNNNNATC	1 cut(s)	579
BseLI	CCNNNNNNNGG	7 cut(s)	434, 571, 630, 1046, 1117, 1217, 2711
BseMI	GCAATG	3 cut(s)	706, 1462, 2280
BseNI	ACTGG	5 cut(s)	178, 2037, 2077, 2542, 2632
BseRI	GAGGAG	1 cut(s)	562
BseSI	GKGCMC	2 cut(s)	211, 440
BsgI	GTGCAG	3 cut(s)	560, 2486, 3151
Bsh1236I	CGCG	2 cut(s)	162, 3017
BshFI	GGCC	8 cut(s)	28, 209, 438, 623, 918, 1221, 1799, 2036
BshNI	GGYRCC	3 cut(s)	508, 1709, 2753
BsiHKAI	GWGCWC	4 cut(s)	2151, 2796, 3063, 3165
BsiHKCI	CYCGRG	3 cut(s)	1563, 2336, 2795
BsiSI	CCGG	3 cut(s)	324, 428, 631
BslFI	GGGAC	5 cut(s)	67, 166, 749, 1711, 2237
BslI	CCNNNNNNNGG	7 cut(s)	434, 571, 630, 1046, 1117, 1217, 2711
BsmAI	GTCTC	4 cut(s)	131, 1181, 1390, 2454
BsmFI	GGGAC	5 cut(s)	67, 166, 749, 1711, 2237
BsmI	GAATGC	2 cut(s)	793, 2890
BsnI	GGCC	8 cut(s)	28, 209, 438, 623, 918, 1221, 1799, 2036
BsoBI	CYCGRG	3 cut(s)	1563, 2336, 2795
Bsp119I	TTCGAA	1 cut(s)	869
Bsp120I	GGGCCC	2 cut(s)	207, 436
Bsp1286I	GDGCHC	7 cut(s)	211, 440, 2151, 2796, 2874, 3063, 3165
Bsp143I	GATC	9 cut(s)	840, 949, 1441, 1685, 1996, 2566, 2716, 2921, 3019
Bsp1720I	GCTNAGC	1 cut(s)	3057
Bsp68I	TCGCGA	1 cut(s)	162
BspACI	CCGC	7 cut(s)	193, 211, 240, 330, 1222, 3017, 3112
BspANI	GGCC	8 cut(s)	28, 209, 438, 623, 918, 1221, 1799, 2036
BspFNI	CGCG	2 cut(s)	162, 3017
BspHI	TCATGA	4 cut(s)	684, 723, 1017, 1791
BspOI	GCTAGC	1 cut(s)	2892
BspPI	GGATC	5 cut(s)	944, 1693, 1991, 2724, 3027
BspQI	GCTCTTC	3 cut(s)	165, 671, 720
BspT104I	TTCGAA	1 cut(s)	869
BspT107I	GGYRCC	3 cut(s)	508, 1709, 2753
BsrDI	GCAATG	3 cut(s)	706, 1462, 2280
BsrI	ACTGG	5 cut(s)	178, 2037, 2077, 2542, 2632
BssECI	CCNNGG	6 cut(s)	631, 1284, 2281, 2531, 2757, 3139
BssMI	GATC	9 cut(s)	840, 949, 1441, 1685, 1996, 2566, 2716, 2921, 3019
BssNI	GRCGYC	1 cut(s)	111
BssSI	CACGAG	1 cut(s)	2122
BssT1I	CCWWGG	2 cut(s)	2757, 3139
Bst2BI	CACGAG	1 cut(s)	2122
Bst2UI	CCWGG	7 cut(s)	119, 454, 1285, 1337, 2282, 2486, 2532
Bst6I	CTCTTC	8 cut(s)	165, 539, 671, 720, 2375, 2452, 3043, 3153
BstACI	GRCGYC	1 cut(s)	111
BstAPI	GCANNNNNTGC	1 cut(s)	2753
BstBI	TTCGAA	1 cut(s)	869
BstF5I	GGATG	6 cut(s)	580, 1423, 1504, 1843, 1854, 2638
BstFNI	CGCG	2 cut(s)	162, 3017
BstH2I	RGCGCY	2 cut(s)	35, 178
BstHHI	GCGC	2 cut(s)	34, 177
BstKTI	GATC	9 cut(s)	843, 952, 1444, 1688, 1999, 2569, 2719, 2924, 3022
BstMAI	GTCTC	4 cut(s)	131, 1181, 1390, 2454
BstMBI	GATC	9 cut(s)	840, 949, 1441, 1685, 1996, 2566, 2716, 2921, 3019
BstMWI	GCNNNNNNNGC	5 cut(s)	894, 1627, 2699, 2753, 3135
BstNI	CCWGG	7 cut(s)	119, 454, 1285, 1337, 2282, 2486, 2532
BstSFI	CTRYAG	2 cut(s)	232, 1041
BstSLI	GKGCMC	2 cut(s)	211, 440
BstUI	CGCG	2 cut(s)	162, 3017
BstV2I	GAAGAC	2 cut(s)	106, 150
BstX2I	RGATCY	4 cut(s)	1685, 1996, 2566, 2921
BstXI	CCANNNNNNTGG	2 cut(s)	392, 1720
BstYI	RGATCY	4 cut(s)	1685, 1996, 2566, 2921
BsuI	GTATCC	1 cut(s)	2425
BsuRI	GGCC	8 cut(s)	28, 209, 438, 623, 918, 1221, 1799, 2036
BtgZI	GCGATG	1 cut(s)	238
BtrI	CACGTC	1 cut(s)	81
BtsCI	GGATG	6 cut(s)	580, 1423, 1504, 1843, 1854, 2638
BtsI	GCAGTG	2 cut(s)	2019, 2697
BtsIMutI	CAGTG	8 cut(s)	1713, 2019, 2314, 2697, 2956, 3037, 3081, 3131
BtuMI	TCGCGA	1 cut(s)	162
CciI	TCATGA	4 cut(s)	684, 723, 1017, 1791
CfoI	GCGC	2 cut(s)	34, 177
Cfr13I	GGNCC	9 cut(s)	207, 208, 321, 327, 436, 437, 763, 1120, 2779
CsiI	ACCWGGT	1 cut(s)	2484
Csp6I	GTAC	4 cut(s)	509, 802, 2453, 2723
CspCI	CAANNNNNGTGG	2 cut(s)	600, 635
CviQI	GTAC	4 cut(s)	509, 802, 2453, 2723
DpnI	GATC	9 cut(s)	842, 951, 1443, 1687, 1998, 2568, 2718, 2923, 3021
DpnII	GATC	9 cut(s)	840, 949, 1441, 1685, 1996, 2566, 2716, 2921, 3019
DraI	TTTAAA	1 cut(s)	1983
DrdI	GACNNNNNNGTC	3 cut(s)	110, 1027, 1127
DseDI	GACNNNNNNGTC	3 cut(s)	110, 1027, 1127
EaeI	YGGCCR	4 cut(s)	26, 621, 916, 1219
Eam1104I	CTCTTC	8 cut(s)	165, 539, 671, 720, 2375, 2452, 3043, 3153
EarI	CTCTTC	8 cut(s)	165, 539, 671, 720, 2375, 2452, 3043, 3153
EciI	GGCGGA	1 cut(s)	229
Ecl136II	GAGCTC	1 cut(s)	3061
Eco130I	CCWWGG	2 cut(s)	2757, 3139
Eco24I	GRGCYC	4 cut(s)	211, 440, 2874, 3063
Eco32I	GATATC	1 cut(s)	2109
Eco47I	GGWCC	5 cut(s)	321, 327, 763, 1120, 2779
Eco53kI	GAGCTC	1 cut(s)	3061
Eco57I	CTGAAG	3 cut(s)	162, 1430, 3246
Eco88I	CYCGRG	3 cut(s)	1563, 2336, 2795
EcoICRI	GAGCTC	1 cut(s)	3061
EcoO109I	RGGNCCY	3 cut(s)	437, 763, 2779
EcoRI	GAATTC	2 cut(s)	815, 1378
EcoRII	CCWGG	7 cut(s)	117, 452, 1283, 1335, 2280, 2484, 2530
EcoRV	GATATC	1 cut(s)	2109
EcoT14I	CCWWGG	2 cut(s)	2757, 3139
EcoT22I	ATGCAT	1 cut(s)	2102
EcoT38I	GRGCYC	4 cut(s)	211, 440, 2874, 3063
ErhI	CCWWGG	2 cut(s)	2757, 3139
FalI	AAGNNNNNCTT	6 cut(s)	241, 273, 1986, 2018, 3132, 3164
FaqI	GGGAC	5 cut(s)	67, 166, 749, 1711, 2237
FauI	CCCGC	2 cut(s)	200, 218
FauNDI	CATATG	2 cut(s)	691, 2764
FbaI	TGATCA	1 cut(s)	840
FblI	GTMKAC	2 cut(s)	2026, 2134
FokI	GGATG	6 cut(s)	567, 1430, 1511, 1841, 1850, 2645
FriOI	GRGCYC	4 cut(s)	211, 440, 2874, 3063
FspBI	CTAG	5 cut(s)	974, 1467, 1952, 2889, 3095
GlaI	GCGC	2 cut(s)	33, 176
GsuI	CTGGAG	4 cut(s)	837, 1845, 1908, 2094
HaeII	RGCGCY	2 cut(s)	35, 178
HaeIII	GGCC	8 cut(s)	28, 209, 438, 623, 918, 1221, 1799, 2036
HapII	CCGG	3 cut(s)	324, 428, 631
HhaI	GCGC	2 cut(s)	34, 177
Hin1I	GRCGYC	1 cut(s)	111
Hin6I	GCGC	2 cut(s)	32, 175
HinP1I	GCGC	2 cut(s)	32, 175
HincII	GTYRAC	3 cut(s)	1873, 2027, 2135
HindII	GTYRAC	3 cut(s)	1873, 2027, 2135
HinfI	GANTC	8 cut(s)	396, 493, 575, 994, 1021, 1737, 2231, 2578
HpaII	CCGG	3 cut(s)	324, 428, 631
HphI	GGTGA	3 cut(s)	42, 190, 1837
Hpy166II	GTNNAC	8 cut(s)	1120, 1423, 1873, 2027, 2070, 2135, 2259, 2403
Hpy8I	GTNNAC	8 cut(s)	1120, 1423, 1873, 2027, 2070, 2135, 2259, 2403
HpyCH4IV	ACGT	3 cut(s)	80, 111, 2674
HpyF10VI	GCNNNNNNNGC	5 cut(s)	894, 1627, 2699, 2753, 3135
HpySE526I	ACGT	3 cut(s)	80, 111, 2674
Hsp92I	GRCGYC	1 cut(s)	111
HspAI	GCGC	2 cut(s)	32, 175
KpnI	GGTACC	1 cut(s)	512
Ksp22I	TGATCA	1 cut(s)	840
Kzo9I	GATC	9 cut(s)	840, 949, 1441, 1685, 1996, 2566, 2716, 2921, 3019
LguI	GCTCTTC	3 cut(s)	165, 671, 720
LmnI	GCTCC	5 cut(s)	856, 883, 2075, 2707, 3252
LweI	GCATC	6 cut(s)	261, 1489, 1620, 1781, 1828, 2680
MabI	ACCWGGT	1 cut(s)	2484
MaeI	CTAG	5 cut(s)	974, 1467, 1952, 2889, 3095
MaeII	ACGT	3 cut(s)	80, 111, 2674
MaeIII	GTNAC	9 cut(s)	48, 355, 976, 1300, 1567, 1825, 2091, 2119, 2912
MalI	GATC	9 cut(s)	842, 951, 1443, 1687, 1998, 2568, 2718, 2923, 3021
MboI	GATC	9 cut(s)	840, 949, 1441, 1685, 1996, 2566, 2716, 2921, 3019
MfeI	CAATTG	3 cut(s)	266, 1752, 2464
MflI	RGATCY	4 cut(s)	1685, 1996, 2566, 2921
MhlI	GDGCHC	7 cut(s)	211, 440, 2151, 2796, 2874, 3063, 3165
MlsI	TGGCCA	1 cut(s)	623
MluNI	TGGCCA	1 cut(s)	623
MlyI	GAGTC	2 cut(s)	1015, 2225
MmeI	TCCRAC	1 cut(s)	268
Mox20I	TGGCCA	1 cut(s)	623
Mph1103I	ATGCAT	1 cut(s)	2102
MroXI	GAANNNNTTC	2 cut(s)	680, 2901
MscI	TGGCCA	1 cut(s)	623
MseI	TTAA	8 cut(s)	1106, 1361, 1902, 1982, 2039, 2187, 2739, 2858
MslI	CAYNNNNRTG	5 cut(s)	390, 1616, 1823, 2789, 3156
Msp20I	TGGCCA	1 cut(s)	623
MspA1I	CMGCKG	3 cut(s)	332, 420, 627
MspI	CCGG	3 cut(s)	324, 428, 631
MunI	CAATTG	3 cut(s)	266, 1752, 2464
Mva1269I	GAATGC	2 cut(s)	793, 2890
MvaI	CCWGG	7 cut(s)	119, 454, 1285, 1337, 2282, 2486, 2532
MvnI	CGCG	2 cut(s)	162, 3017
MwoI	GCNNNNNNNGC	5 cut(s)	894, 1627, 2699, 2753, 3135
NciI	CCSGG	3 cut(s)	325, 429, 632
NdeI	CATATG	2 cut(s)	691, 2764
NdeII	GATC	9 cut(s)	840, 949, 1441, 1685, 1996, 2566, 2716, 2921, 3019
NheI	GCTAGC	1 cut(s)	2888
NmeAIII	GCCGAG	1 cut(s)	1367
NmuCI	GTSAC	6 cut(s)	48, 976, 1567, 1825, 2119, 2912
NruI	TCGCGA	1 cut(s)	162
NsiI	ATGCAT	1 cut(s)	2102
NspV	TTCGAA	1 cut(s)	869
OliI	CACNNNNGTG	1 cut(s)	1823
PaeR7I	CTCGAG	3 cut(s)	1563, 2336, 2795
PagI	TCATGA	4 cut(s)	684, 723, 1017, 1791
PciSI	GCTCTTC	3 cut(s)	165, 671, 720
PctI	GAATGC	2 cut(s)	793, 2890
PdmI	GAANNNNTTC	2 cut(s)	680, 2901
PfeI	GAWTC	6 cut(s)	396, 493, 575, 994, 1737, 2578
PflMI	CCANNNNNTGG	2 cut(s)	1217, 2711
PfoI	TCCNGGA	2 cut(s)	117, 427
PleI	GAGTC	2 cut(s)	1015, 2225
PpsI	GAGTC	2 cut(s)	1015, 2225
PpuMI	RGGWCCY	2 cut(s)	763, 2779
Psp124BI	GAGCTC	1 cut(s)	3063
Psp5II	RGGWCCY	2 cut(s)	763, 2779
Psp6I	CCWGG	7 cut(s)	117, 452, 1283, 1335, 2280, 2484, 2530
PspGI	CCWGG	7 cut(s)	117, 452, 1283, 1335, 2280, 2484, 2530
PspOMI	GGGCCC	2 cut(s)	207, 436
PspPI	GGNCC	9 cut(s)	207, 208, 321, 327, 436, 437, 763, 1120, 2779
PspPPI	RGGWCCY	2 cut(s)	763, 2779
PspXI	VCTCGAGB	2 cut(s)	1563, 2336
PsuI	RGATCY	4 cut(s)	1685, 1996, 2566, 2921
PvuII	CAGCTG	2 cut(s)	420, 627
RruI	TCGCGA	1 cut(s)	162
RsaI	GTAC	4 cut(s)	510, 803, 2454, 2724
RsaNI	GTAC	4 cut(s)	509, 802, 2453, 2723
RseI	CAYNNNNRTG	5 cut(s)	390, 1616, 1823, 2789, 3156
SacI	GAGCTC	1 cut(s)	3063
SalI	GTCGAC	2 cut(s)	2025, 2133
SapI	GCTCTTC	3 cut(s)	165, 671, 720
SaqAI	TTAA	8 cut(s)	1106, 1361, 1902, 1982, 2039, 2187, 2739, 2858
Sau3AI	GATC	9 cut(s)	840, 949, 1441, 1685, 1996, 2566, 2716, 2921, 3019
Sau96I	GGNCC	9 cut(s)	207, 208, 321, 327, 436, 437, 763, 1120, 2779
SchI	GAGTC	2 cut(s)	1015, 2225
SduI	GDGCHC	7 cut(s)	211, 440, 2151, 2796, 2874, 3063, 3165
SexAI	ACCWGGT	1 cut(s)	2484
SfaNI	GCATC	6 cut(s)	261, 1489, 1620, 1781, 1828, 2680
SfcI	CTRYAG	2 cut(s)	232, 1041
Sfr274I	CTCGAG	3 cut(s)	1563, 2336, 2795
SfuI	TTCGAA	1 cut(s)	869
SinI	GGWCC	5 cut(s)	321, 327, 763, 1120, 2779
SlaI	CTCGAG	3 cut(s)	1563, 2336, 2795
SmiMI	CAYNNNNRTG	5 cut(s)	390, 1616, 1823, 2789, 3156
SmlI	CTYRAG	6 cut(s)	470, 1025, 1563, 2003, 2336, 2795
SmoI	CTYRAG	6 cut(s)	470, 1025, 1563, 2003, 2336, 2795
SsiI	CCGC	7 cut(s)	193, 211, 240, 330, 1222, 3017, 3112
SspMI	CTAG	5 cut(s)	974, 1467, 1952, 2889, 3095
SstI	GAGCTC	1 cut(s)	3063
StyI	CCWWGG	2 cut(s)	2757, 3139
TaiI	ACGT	3 cut(s)	83, 114, 2677
TaqII	GACCGA	1 cut(s)	3261
TauI	GCSGC	1 cut(s)	1224
TfiI	GAWTC	6 cut(s)	396, 493, 575, 994, 1737, 2578
Tru1I	TTAA	8 cut(s)	1106, 1361, 1902, 1982, 2039, 2187, 2739, 2858
Tru9I	TTAA	8 cut(s)	1106, 1361, 1902, 1982, 2039, 2187, 2739, 2858
TscAI	CASTG	8 cut(s)	1720, 2019, 2314, 2704, 2956, 3044, 3081, 3131
TseFI	GTSAC	6 cut(s)	48, 976, 1567, 1825, 2119, 2912
Tsp45I	GTSAC	6 cut(s)	48, 976, 1567, 1825, 2119, 2912
TspGWI	ACGGA	2 cut(s)	998, 1100
TspRI	CASTG	8 cut(s)	1720, 2019, 2314, 2704, 2956, 3044, 3081, 3131
Van91I	CCANNNNNTGG	2 cut(s)	1217, 2711
VpaK11BI	GGWCC	5 cut(s)	321, 327, 763, 1120, 2779
XhoI	CTCGAG	3 cut(s)	1563, 2336, 2795
XmiI	GTMKAC	2 cut(s)	2026, 2134
XmnI	GAANNNNTTC	2 cut(s)	680, 2901
XspI	CTAG	5 cut(s)	974, 1467, 1952, 2889, 3095
ZraI	GACGTC	1 cut(s)	112
Zsp2I	ATGCAT	1 cut(s)	2102

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.