Prupe.5G041700_v2.0.a1

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
4556981 .. 4563794
6814 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G041700.1

Sequence Viewer

Length: 1491 bp
ATGGGCTGCTTACACTCCAAAACCACCCACCTCCACCTCTCCCCTGACGACCCATCTTCTCTACCCGACACTCACAAACCCGACTCAGCTAATGGAGATCAAGCTGAGCTAGAGGCCCAAGCCCCTGTGTTCAAAGAGTACAGTCTAGACGAGCTACGAAAGGCCACCAATGGGTTCAGCTCCGAATGTATTGTTTCCGAGAGTGGTGAAAAAGCCCCCAATGTCGTCTACAGAGGAAAACTTGATAACAATCGCCTTGTCGCTGTTAAACGCTTCTCCAAGCAGTCTTGGCCCGACGCCCAACAGTTTGTGCAGGTTGAGGCTGTGGGAGTGGGGAAGTTGAGGCACAAGAGATTAGTGAATCTGGTTGGTTGCTGTGCCGAGGGAGATGAACGGCTCTTGGTGGCTGAGTATATGCCCAATGATACTCTTTCCAAGCATCTCTTTCATTGGGACAAGAAGCCATTGCCATGGGAAATGCGTGTTAGAGTTGCATACTATATTGCACAGGCACTCGATCATTGTAATATCGAGAACCGGAAGATCTATCATGATTTAAATGCATACAGAGTTCTTTTTGATGAGGATGGTGACCCTCGTTTGTCTACCTTTGGTCTTATGAAAAATAGTCGAGACGGAAAAAGCTACAGTACAAATTTAGCTTATACTCCACCTGAGTTTCTACGTACAGGCAGGGTCATTCCAGAGAGTGTAATCTACAGTTATGGAACTGTCCTGTTGGACCTTTTGAGTGGCAAGCATATTCCTCCAAGCCATGCACTGGACTTGATAAGGGAAAAGAATGTATTGTTGTTGATGGATTCATCATTGGAAGGGCAGTATGTGAATGATGATGCCACTAAATTGGTTGAACTTGCTTCCAAATGTCTTCAGTCTGAGGCTAGGGATAGAGGAGATATTAAGTTTCTTCTTACAGTCGTTGCACCACTTCAAAAGCAGAAAGAGGCGGCATCTCATGTTCTAATGGGCCTTCCTAGAAATACTGTTGTGGTTCCAACCATGCTTTCTCCTCTTGGAAAGGCTTGTGCAAGGATGGATCTTACTGCTGTGCATGATATTTTGCTAAAAACAGGCTATAAAGATGAAGAAGGTGCAGAAAATGAGCTCTCATTCCAAGAATGGACACAACAAGTCCAAGATATGTTGAACACGAAGAAATTTGGGGATATTGCATTTAGGGACAAGGATTTCAAGAATGCAATTGAGTATTATTCCAAGTTAGTCGCTATGATGTCTGGCCCTTCAGCAACTGTCTTTGCGAGAAGAGCCTTCTCCTACTTGATGAACGGCCAAGCAGAACTTGCTTTAAGAGATGCGATGCAGGCACAGGTGTGTATACCAGAGTGGCCAACTGCTTTCTACTTGCAAGCTCTGGCACTCTCAAAGCTTGGAATGGAGACTGATGCTCAGGACATGCTTAATGATGGAGCAGCCTTCGAAGCAAAGCGGCACAACACATGGCGTAGCTAA

Protein Analysis

497

Amino Acids

55.74

Weight (kDa)

6.09

Isoelectric Point (pI)

35.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 304
AccB7I CCANNNNNTGG 1 cut(s) 781
AccI GTMKAC 3 cut(s) 228, 605, 1357
AciI CCGC 2 cut(s) 968, 1468
AclWI GGATC 1 cut(s) 1065
AcoI YGGCCR 2 cut(s) 1309, 1367
AcsI RAATTY 2 cut(s) 655, 1178
AcuI CTGAAG 2 cut(s) 875, 1248
AcyI GRCGYC 1 cut(s) 297
AfaI GTAC 3 cut(s) 140, 652, 688
AfiI CCNNNNNNNGG 2 cut(s) 171, 781
AgsI TTSAA 5 cut(s) 133, 872, 953, 1168, 1213
AjuI GAANNNNNNNTTGG 2 cut(s) 1009, 1041
AleI CACNNNNGTG 1 cut(s) 1351
Alw21I GWGCWC 1 cut(s) 1128
Alw26I GTCTC 2 cut(s) 627, 1412
AlwI GGATC 1 cut(s) 1065
AlwNI CAGNNNCTG 1 cut(s) 1271
AoxI GGCC 7 cut(s) 114, 162, 290, 988, 1258, 1309, 1367
ApeKI GCWGC 2 cut(s) 6, 1451
ApoI RAATTY 2 cut(s) 655, 1178
AspS9I GGNCC 5 cut(s) 115, 291, 742, 988, 1259
AsuHPI GGTGA 2 cut(s) 218, 602
AsuII TTCGAA 1 cut(s) 1458
AvaII GGWCC 1 cut(s) 742
BalI TGGCCA 1 cut(s) 1369
BanII GRGCYC 1 cut(s) 1128
BbsI GAAGAC 1 cut(s) 881
Bbv12I GWGCWC 1 cut(s) 1128
BbvI GCAGC 1 cut(s) 1463
BccI CCATC 5 cut(s) 61, 581, 811, 1048, 1439
BceAI ACGGC 2 cut(s) 410, 1324
BcoDI GTCTC 2 cut(s) 627, 1412
BfaI CTAG 4 cut(s) 110, 146, 903, 996
BfmI CTRYAG 3 cut(s) 229, 646, 718
BfuAI ACCTGC 1 cut(s) 304
BglII AGATCT 1 cut(s) 543
BisI GCNGC 4 cut(s) 7, 969, 1452, 1469
BlpI GCTNAGC 1 cut(s) 105
BlsI GCNGC 4 cut(s) 8, 970, 1453, 1470
Bme18I GGWCC 1 cut(s) 742
BmgT120I GGNCC 5 cut(s) 115, 291, 742, 988, 1259
BmiI GGNNCC 1 cut(s) 1014
BmsI GCATC 6 cut(s) 448, 844, 980, 1324, 1329, 1414
BpiI GAAGAC 1 cut(s) 881
Bpu10I CCTNAGC 1 cut(s) 1428
Bpu1102I GCTNAGC 1 cut(s) 105
Bpu14I TTCGAA 1 cut(s) 1458
BsaAI YACGTR 1 cut(s) 686
BsaBI GATNNNNATC 1 cut(s) 249
BsaHI GRCGYC 1 cut(s) 297
BsaJI CCNNGG 2 cut(s) 381, 470
BsaWI WCCGGW 1 cut(s) 537
Bsc4I CCNNNNNNNGG 2 cut(s) 171, 781
Bse1I ACTGG 1 cut(s) 786
Bse3DI GCAATG 1 cut(s) 464
Bse8I GATNNNNATC 1 cut(s) 249
BseDI CCNNGG 2 cut(s) 381, 470
BseGI GGATG 2 cut(s) 592, 1059
BseJI GATNNNNATC 1 cut(s) 249
BseLI CCNNNNNNNGG 2 cut(s) 171, 781
BseMI GCAATG 1 cut(s) 464
BseMII CTCAG 6 cut(s) 96, 99, 399, 666, 888, 1442
BseNI ACTGG 1 cut(s) 786
BseRI GAGGAG 2 cut(s) 927, 1020
BseXI GCAGC 1 cut(s) 1463
BsgI GTGCAG 2 cut(s) 332, 1134
BshFI GGCC 7 cut(s) 116, 164, 292, 990, 1260, 1311, 1369
BsiHKAI GWGCWC 1 cut(s) 1128
BsiSI CCGG 1 cut(s) 538
BslFI GGGAC 2 cut(s) 467, 1214
BslI CCNNNNNNNGG 2 cut(s) 171, 781
BsmAI GTCTC 2 cut(s) 627, 1412
BsmBI CGTCTC 1 cut(s) 627
BsmFI GGGAC 2 cut(s) 467, 1214
BsmI GAATGC 1 cut(s) 1222
BsnI GGCC 7 cut(s) 116, 164, 292, 990, 1260, 1311, 1369
Bsp119I TTCGAA 1 cut(s) 1458
Bsp1286I GDGCHC 1 cut(s) 1128
Bsp143I GATC 4 cut(s) 97, 517, 543, 1057
Bsp1720I GCTNAGC 1 cut(s) 105
Bsp19I CCATGG 1 cut(s) 470
BspACI CCGC 2 cut(s) 968, 1468
BspANI GGCC 7 cut(s) 116, 164, 292, 990, 1260, 1311, 1369
BspCNI CTCAG 6 cut(s) 97, 98, 400, 667, 889, 1441
BspHI TCATGA 1 cut(s) 550
BspLI GGNNCC 1 cut(s) 1014
BspMI ACCTGC 1 cut(s) 304
BspPI GGATC 1 cut(s) 1065
BspQI GCTCTTC 1 cut(s) 1279
BspT104I TTCGAA 1 cut(s) 1458
BsrDI GCAATG 1 cut(s) 464
BsrI ACTGG 1 cut(s) 786
BssECI CCNNGG 2 cut(s) 381, 470
BssMI GATC 4 cut(s) 97, 517, 543, 1057
BssNAI GTATAC 1 cut(s) 1358
BssNI GRCGYC 1 cut(s) 297
BssT1I CCWWGG 1 cut(s) 470
Bst1107I GTATAC 1 cut(s) 1358
Bst4CI ACNGT 8 cut(s) 143, 306, 650, 722, 733, 937, 1006, 1273
Bst6I CTCTTC 1 cut(s) 1279
BstACI GRCGYC 1 cut(s) 297
BstAPI GCANNNNNTGC 1 cut(s) 1322
BstBAI YACGTR 1 cut(s) 686
BstBI TTCGAA 1 cut(s) 1458
BstC8I GCNNGC 3 cut(s) 758, 1344, 1389
BstDEI CTNAG 6 cut(s) 85, 105, 408, 675, 897, 1428
BstDSI CCRYGG 1 cut(s) 470
BstEII GGTNACC 1 cut(s) 590
BstF5I GGATG 2 cut(s) 592, 1059
BstKTI GATC 4 cut(s) 100, 520, 546, 1060
BstMAI GTCTC 2 cut(s) 627, 1412
BstMBI GATC 4 cut(s) 97, 517, 543, 1057
BstMWI GCNNNNNNNGC 5 cut(s) 289, 1286, 1322, 1343, 1460
BstNSI RCATGY 1 cut(s) 1438
BstPI GGTNACC 1 cut(s) 590
BstSFI CTRYAG 3 cut(s) 229, 646, 718
BstSNI TACGTA 1 cut(s) 686
BstV1I GCAGC 1 cut(s) 1463
BstV2I GAAGAC 1 cut(s) 881
BstX2I RGATCY 2 cut(s) 543, 1057
BstXI CCANNNNNNTGG 2 cut(s) 471, 865
BstYI RGATCY 2 cut(s) 543, 1057
BstZ17I GTATAC 1 cut(s) 1358
BsuRI GGCC 7 cut(s) 116, 164, 292, 990, 1260, 1311, 1369
BtgI CCRYGG 1 cut(s) 470
BtgZI GCGATG 1 cut(s) 1352
BtsCI GGATG 2 cut(s) 592, 1059
BtsIMutI CAGTG 1 cut(s) 779
BveI ACCTGC 1 cut(s) 304
Cac8I GCNNGC 3 cut(s) 758, 1344, 1389
CaiI CAGNNNCTG 1 cut(s) 1271
CciI TCATGA 1 cut(s) 550
Cfr13I GGNCC 5 cut(s) 115, 291, 742, 988, 1259
CseI GACGC 1 cut(s) 305
Csp6I GTAC 3 cut(s) 139, 651, 687
CviAII CATG 8 cut(s) 471, 551, 776, 977, 1021, 1073, 1435, 1479
CviQI GTAC 3 cut(s) 139, 651, 687
DdeI CTNAG 6 cut(s) 85, 105, 408, 675, 897, 1428
DpnI GATC 4 cut(s) 99, 519, 545, 1059
DpnII GATC 4 cut(s) 97, 517, 543, 1057
DraI TTTAAA 1 cut(s) 558
EaeI YGGCCR 2 cut(s) 1309, 1367
Eam1104I CTCTTC 1 cut(s) 1279
EarI CTCTTC 1 cut(s) 1279
Ecl136II GAGCTC 1 cut(s) 1126
Eco105I TACGTA 1 cut(s) 686
Eco130I CCWWGG 1 cut(s) 470
Eco24I GRGCYC 1 cut(s) 1128
Eco47I GGWCC 1 cut(s) 742
Eco53kI GAGCTC 1 cut(s) 1126
Eco57I CTGAAG 2 cut(s) 875, 1248
Eco91I GGTNACC 1 cut(s) 590
EcoICRI GAGCTC 1 cut(s) 1126
EcoO65I GGTNACC 1 cut(s) 590
EcoT14I CCWWGG 1 cut(s) 470
EcoT22I ATGCAT 1 cut(s) 565
EcoT38I GRGCYC 1 cut(s) 1128
ErhI CCWWGG 1 cut(s) 470
Esp3I CGTCTC 1 cut(s) 627
FaeI CATG 8 cut(s) 474, 554, 779, 980, 1024, 1076, 1438, 1482
FalI AAGNNNNNCTT 4 cut(s) 428, 460, 1305, 1337
FaqI GGGAC 2 cut(s) 467, 1214
FatI CATG 8 cut(s) 470, 550, 775, 976, 1020, 1072, 1434, 1478
FblI GTMKAC 3 cut(s) 228, 605, 1357
Fnu4HI GCNGC 4 cut(s) 7, 969, 1452, 1469
FokI GGATG 2 cut(s) 599, 1066
FriOI GRGCYC 1 cut(s) 1128
Fsp4HI GCNGC 4 cut(s) 7, 969, 1452, 1469
FspBI CTAG 4 cut(s) 110, 146, 903, 996
GluI GCNGC 4 cut(s) 7, 969, 1452, 1469
HaeIII GGCC 7 cut(s) 116, 164, 292, 990, 1260, 1311, 1369
HapII CCGG 1 cut(s) 538
HgaI GACGC 1 cut(s) 305
Hin1I GRCGYC 1 cut(s) 297
Hin1II CATG 8 cut(s) 474, 554, 779, 980, 1024, 1076, 1438, 1482
HindIII AAGCTT 1 cut(s) 1406
HinfI GANTC 3 cut(s) 83, 361, 821
HpaII CCGG 1 cut(s) 538
HphI GGTGA 2 cut(s) 218, 602
Hpy166II GTNNAC 3 cut(s) 229, 606, 1358
Hpy188I TCNGA 3 cut(s) 184, 199, 898
Hpy188III TCNNGA 7 cut(s) 146, 532, 551, 632, 704, 1213, 1430
Hpy8I GTNNAC 3 cut(s) 229, 606, 1358
Hpy99I CGWCG 1 cut(s) 299
HpyAV CCTTC 6 cut(s) 827, 1001, 1103, 1272, 1300, 1465
HpyCH4III ACNGT 8 cut(s) 143, 306, 650, 722, 733, 937, 1006, 1273
HpyCH4IV ACGT 1 cut(s) 685
HpyF10VI GCNNNNNNNGC 5 cut(s) 289, 1286, 1322, 1343, 1460
HpyF3I CTNAG 6 cut(s) 85, 105, 408, 675, 897, 1428
HpySE526I ACGT 1 cut(s) 685
Hsp92I GRCGYC 1 cut(s) 297
Hsp92II CATG 8 cut(s) 474, 554, 779, 980, 1024, 1076, 1438, 1482
Kzo9I GATC 4 cut(s) 97, 517, 543, 1057
LguI GCTCTTC 1 cut(s) 1279
LmnI GCTCC 2 cut(s) 185, 1448
Lsp1109I GCAGC 1 cut(s) 1463
LweI GCATC 6 cut(s) 448, 844, 980, 1324, 1329, 1414
MaeI CTAG 4 cut(s) 110, 146, 903, 996
MaeII ACGT 1 cut(s) 685
MaeIII GTNAC 1 cut(s) 590
MalI GATC 4 cut(s) 99, 519, 545, 1059
MboI GATC 4 cut(s) 97, 517, 543, 1057
MboII GAAGA 7 cut(s) 48, 553, 881, 920, 1118, 1186, 1296
MfeI CAATTG 1 cut(s) 1221
MflI RGATCY 2 cut(s) 543, 1057
MhlI GDGCHC 1 cut(s) 1128
MlsI TGGCCA 1 cut(s) 1369
MluCI AATT 4 cut(s) 655, 863, 1178, 1221
MluNI TGGCCA 1 cut(s) 1369
MlyI GAGTC 1 cut(s) 77
MmeI TCCRAC 2 cut(s) 720, 1040
Mox20I TGGCCA 1 cut(s) 1369
Mph1103I ATGCAT 1 cut(s) 565
MscI TGGCCA 1 cut(s) 1369
MseI TTAA 5 cut(s) 267, 557, 921, 1328, 1440
MslI CAYNNNNRTG 2 cut(s) 469, 1351
Msp20I TGGCCA 1 cut(s) 1369
MspI CCGG 1 cut(s) 538
MunI CAATTG 1 cut(s) 1221
Mva1269I GAATGC 1 cut(s) 1222
MwoI GCNNNNNNNGC 5 cut(s) 289, 1286, 1322, 1343, 1460
NcoI CCATGG 1 cut(s) 470
NdeII GATC 4 cut(s) 97, 517, 543, 1057
NlaIII CATG 8 cut(s) 474, 554, 779, 980, 1024, 1076, 1438, 1482
NlaIV GGNNCC 1 cut(s) 1014
NmeAIII GCCGAG 1 cut(s) 406
NmuCI GTSAC 1 cut(s) 590
NsiI ATGCAT 1 cut(s) 565
NspI RCATGY 1 cut(s) 1438
NspV TTCGAA 1 cut(s) 1458
OliI CACNNNNGTG 1 cut(s) 1351
PagI TCATGA 1 cut(s) 550
PciSI GCTCTTC 1 cut(s) 1279
PctI GAATGC 1 cut(s) 1222
PfeI GAWTC 2 cut(s) 361, 821
PflMI CCANNNNNTGG 1 cut(s) 781
PkrI GCNGC 4 cut(s) 8, 970, 1453, 1470
PleI GAGTC 1 cut(s) 77
PpsI GAGTC 1 cut(s) 77
Ppu21I YACGTR 1 cut(s) 686
Psp124BI GAGCTC 1 cut(s) 1128
PspEI GGTNACC 1 cut(s) 590
PspN4I GGNNCC 1 cut(s) 1014
PspPI GGNCC 5 cut(s) 115, 291, 742, 988, 1259
PstNI CAGNNNCTG 1 cut(s) 1271
PsuI RGATCY 2 cut(s) 543, 1057
RsaI GTAC 3 cut(s) 140, 652, 688
RsaNI GTAC 3 cut(s) 139, 651, 687
RseI CAYNNNNRTG 2 cut(s) 469, 1351
SacI GAGCTC 1 cut(s) 1128
SapI GCTCTTC 1 cut(s) 1279
SaqAI TTAA 5 cut(s) 267, 557, 921, 1328, 1440
SatI GCNGC 4 cut(s) 7, 969, 1452, 1469
Sau3AI GATC 4 cut(s) 97, 517, 543, 1057
Sau96I GGNCC 5 cut(s) 115, 291, 742, 988, 1259
SchI GAGTC 1 cut(s) 77
SduI GDGCHC 1 cut(s) 1128
SfaNI GCATC 6 cut(s) 448, 844, 980, 1324, 1329, 1414
SfcI CTRYAG 3 cut(s) 229, 646, 718
SfuI TTCGAA 1 cut(s) 1458
SinI GGWCC 1 cut(s) 742
SmiI ATTTAAAT 1 cut(s) 558
SmiMI CAYNNNNRTG 2 cut(s) 469, 1351
SnaBI TACGTA 1 cut(s) 686
Sse9I AATT 4 cut(s) 655, 863, 1178, 1221
SsiI CCGC 2 cut(s) 968, 1468
SspMI CTAG 4 cut(s) 110, 146, 903, 996
SstI GAGCTC 1 cut(s) 1128
StyI CCWWGG 1 cut(s) 470
SwaI ATTTAAAT 1 cut(s) 558
TaaI ACNGT 8 cut(s) 143, 306, 650, 722, 733, 937, 1006, 1273
TaiI ACGT 1 cut(s) 688
TaqI TCGA 4 cut(s) 516, 531, 631, 1458
TasI AATT 4 cut(s) 655, 863, 1178, 1221
TatI WGTACW 2 cut(s) 138, 650
TauI GCSGC 2 cut(s) 971, 1471
TfiI GAWTC 2 cut(s) 361, 821
Tru1I TTAA 5 cut(s) 267, 557, 921, 1328, 1440
Tru9I TTAA 5 cut(s) 267, 557, 921, 1328, 1440
TscAI CASTG 1 cut(s) 786
TseFI GTSAC 1 cut(s) 590
TseI GCWGC 2 cut(s) 6, 1451
Tsp45I GTSAC 1 cut(s) 590
TspDTI ATGAA 6 cut(s) 405, 437, 635, 813, 1119, 1319
TspGWI ACGGA 1 cut(s) 651
TspRI CASTG 1 cut(s) 786
Van91I CCANNNNNTGG 1 cut(s) 781
VpaK11BI GGWCC 1 cut(s) 742
XapI RAATTY 2 cut(s) 655, 1178
XbaI TCTAGA 1 cut(s) 145
XceI RCATGY 1 cut(s) 1438
XmiI GTMKAC 3 cut(s) 228, 605, 1357
XspI CTAG 4 cut(s) 110, 146, 903, 996
Zsp2I ATGCAT 1 cut(s) 565
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.