RchiOBHm_Chr7g0208991

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
26363343 .. 26369457
6115 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ18705

Sequence Viewer

Length: 1491 bp
ATGGGTTGCTTTCACTCCAAAACCGCCCACCTCCACTCCCCCGACGACCCGTCTCCTGTCCCCGAAGCTCAGAAACCCGACCCGGCTGATGGGGATCAAGCTGAGGTTGGGGACCAAGTGCCGGCGTTCAAAGAGTACAGTCTGAACGAGCTGCGGAAGGCGACGAATGGGTTCAGCTCTGAATTTATAGTTTCTGAGAGCGGCGAAAAAGCCCCAAATGTAGTTTACAAGGGGAAGCTTGAAAGCAATCGCCTTGTTGCTGTAAAACGCTTCTCCAAGCAGTCTTGGCCGGACGCCCAGCAGTTTGTGGCTGAGGCTGCGGGAGTGGGGAAGTTGAGGCACAAGAGATTAGTGAATCTGATTGGTTGCTGTGCCGAGGGAGATGAACGCCTCTTGGTGGCTCAGTACATGTCCAATGATACTCTTTCCAAGCATCTCTTCCATTGGGATAAGCAGCCATTGCCATGGGAAATGCGTGTTAGAGTTGCATATTATATTGCACAGGCACTTGATCATTGTAATACAGAAAACCGGAAGATCTATCATGATTTGAATGCATATAGAGTTCTATTTGACGAGGATGGTGACCCTCGCTTGTCTAGTTTTGGCCTTATGAAAAATAGTCGAGATGGAAAAAGCTACAGTACTAATTTAGCTTACACTCCACCTGAGTTTCTACGGACAGGCAGGGTCATCCCAGAGAGTGTAATCTACAGTTATGGAACTGTCCTGTTGGACCTTTTGAGTGGAAAGCATATTCCTCCGCTCCATGCACTCGACTTGATAAGGGGAAAGAATGTATTGTTGTTGATGGATTCATCATTGGAAGGACAGTATGAGAATGATGATGCTACCAAATTGGTTGAACTTGCTTCCAAATGTCTTCAGTCTGAGGCTAGGGATAGAGGAGATATTAAGTGTCTTCTTACAGCTGTTGCACCACTTCAAAAGCAAAAAGAGGTGGCATCTCATGTTTTAATGGGCCTCCCAAAAAACAAAAATACAGTTGTGGTGCCAACCATGCTTTCTCCTCTTGGGAAGGCTTGTGCGAGGATGGATCTTACTGCTGTTCATGATATTTTGCTAAAAACTGGTTATAGAGACGAAGAAGGTGCAGAAAATGAGCTTTCATTTCAAGAATGGACACAGCAAGTCCAAGACATGTTGAACACTAAGAAATTTGGAGATATTGCATTTAGAGACAAGGATTTCAAGAATGCAATTGAGTATTATTCCAAGTTAATCGTTATGATGTCCGTTCCTTCTGCGACTGTGTTTGCAAGAAGAGCCTTCTCCTACTTGATGAATGGCCAAGCAGAACTTGCTTTGAGAGATGCTATGCAGGCACAGGTTTGCATACCAGAGTGGCCAACTGCATTCTACTTGCAGGCCCTTGCACTCTCAAAGCTCGGAATGGAGACTGATGCTCAGGACATGCTTAATGACGGAGCAGCCTTTGAAGCGAAGAGACACAGCATCTGGCGGGGTTAA

Protein Analysis

496

Amino Acids

55.59

Weight (kDa)

6.15

Isoelectric Point (pI)

34.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 74 - 309 3e-26 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 74 - 305 2.5e-24 Protein kinase domain
TPR_BSK1_C PF25575 347 - 464 3.2e-55 Serine/threonine-protein kinase BSK1-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1012
AccBSI CCGCTC 2 cut(s) 201, 766
AciI CCGC 6 cut(s) 24, 154, 201, 320, 764, 1483
AclWI GGATC 2 cut(s) 102, 1065
AcoI YGGCCR 3 cut(s) 287, 1309, 1367
AcsI RAATTY 2 cut(s) 182, 1178
AcuI CTGAAG 1 cut(s) 869
AcyI GRCGYC 1 cut(s) 294
AfaI GTAC 3 cut(s) 137, 407, 646
AfiI CCNNNNNNNGG 3 cut(s) 89, 121, 397
AflIII ACRYGT 2 cut(s) 408, 1161
AgsI TTSAA 9 cut(s) 130, 242, 553, 866, 947, 1136, 1168, 1213, 1460
AhdI GACNNNNNGTC 1 cut(s) 49
AjuI GAANNNNNNNTTGG 4 cut(s) 422, 454, 1009, 1041
Alw26I GTCTC 5 cut(s) 57, 1095, 1194, 1412, 1462
AlwI GGATC 2 cut(s) 102, 1065
AlwNI CAGNNNCTG 1 cut(s) 1479
AoxI GGCC 6 cut(s) 287, 607, 982, 1309, 1367, 1389
ApeKI GCWGC 4 cut(s) 151, 317, 454, 1451
ApoI RAATTY 2 cut(s) 182, 1178
Asp700I GAANNNNTTC 1 cut(s) 170
AspS9I GGNCC 4 cut(s) 112, 736, 982, 1390
AsuC2I CCSGG 1 cut(s) 83
AsuHPI GGTGA 1 cut(s) 596
AvaII GGWCC 2 cut(s) 112, 736
BalI TGGCCA 2 cut(s) 1311, 1369
BanI GGYRCC 1 cut(s) 1012
BbsI GAAGAC 2 cut(s) 875, 914
BbvCI CCTCAGC 2 cut(s) 102, 312
BbvI GCAGC 4 cut(s) 138, 304, 466, 1463
BccI CCATC 5 cut(s) 83, 575, 623, 805, 1048
BcgI CGANNNNNNTGC 2 cut(s) 1094, 1128
BclI TGATCA 1 cut(s) 511
BcnI CCSGG 1 cut(s) 83
BcoDI GTCTC 5 cut(s) 57, 1095, 1194, 1412, 1462
BfaI CTAG 2 cut(s) 600, 897
BfmI CTRYAG 2 cut(s) 640, 712
BglII AGATCT 1 cut(s) 537
BisI GCNGC 5 cut(s) 152, 202, 318, 455, 1452
BlsI GCNGC 5 cut(s) 153, 203, 319, 456, 1453
BmcAI AGTACT 1 cut(s) 646
Bme1390I CCNGG 1 cut(s) 83
Bme18I GGWCC 2 cut(s) 112, 736
BmeRI GACNNNNNGTC 1 cut(s) 49
BmgT120I GGNCC 4 cut(s) 112, 736, 982, 1390
BmiI GGNNCC 2 cut(s) 113, 1014
BmrFI CCNGG 1 cut(s) 83
BmsI GCATC 6 cut(s) 442, 838, 974, 1324, 1414, 1485
BpiI GAAGAC 2 cut(s) 875, 914
Bpu10I CCTNAGC 3 cut(s) 102, 312, 1428
BpuMI CCSGG 1 cut(s) 83
BsaBI GATNNNNATC 1 cut(s) 93
BsaHI GRCGYC 1 cut(s) 294
BsaJI CCNNGG 2 cut(s) 375, 464
BsaWI WCCGGW 1 cut(s) 531
BsaXI ACNNNNNCTCC 2 cut(s) 20, 50
Bsc4I CCNNNNNNNGG 3 cut(s) 89, 121, 397
Bse118I RCCGGY 1 cut(s) 121
Bse1I ACTGG 1 cut(s) 1096
Bse3DI GCAATG 1 cut(s) 458
Bse8I GATNNNNATC 1 cut(s) 93
BseDI CCNNGG 2 cut(s) 375, 464
BseGI GGATG 3 cut(s) 586, 693, 1059
BseJI GATNNNNATC 1 cut(s) 93
BseLI CCNNNNNNNGG 3 cut(s) 89, 121, 397
BseMI GCAATG 1 cut(s) 458
BseMII CTCAG 8 cut(s) 83, 93, 186, 303, 416, 660, 882, 1442
BseNI ACTGG 1 cut(s) 1096
BseRI GAGGAG 2 cut(s) 921, 1020
BseXI GCAGC 4 cut(s) 138, 304, 466, 1463
BseYI CCCAGC 1 cut(s) 297
BsgI GTGCAG 1 cut(s) 1134
BshFI GGCC 6 cut(s) 289, 609, 984, 1311, 1369, 1391
BshNI GGYRCC 1 cut(s) 1012
BsiSI CCGG 4 cut(s) 83, 122, 290, 532
BslFI GGGAC 2 cut(s) 44, 125
BslI CCNNNNNNNGG 3 cut(s) 89, 121, 397
BsmAI GTCTC 5 cut(s) 57, 1095, 1194, 1412, 1462
BsmBI CGTCTC 2 cut(s) 57, 1095
BsmFI GGGAC 2 cut(s) 44, 125
BsmI GAATGC 3 cut(s) 559, 1222, 1376
BsnI GGCC 6 cut(s) 289, 609, 984, 1311, 1369, 1391
Bsp143I GATC 4 cut(s) 94, 511, 537, 1057
Bsp19I CCATGG 1 cut(s) 464
BspACI CCGC 6 cut(s) 24, 154, 201, 320, 764, 1483
BspANI GGCC 6 cut(s) 289, 609, 984, 1311, 1369, 1391
BspCNI CTCAG 8 cut(s) 82, 94, 187, 304, 415, 661, 883, 1441
BspHI TCATGA 2 cut(s) 544, 1072
BspLI GGNNCC 2 cut(s) 113, 1014
BspPI GGATC 2 cut(s) 102, 1065
BspQI GCTCTTC 1 cut(s) 1279
BspT107I GGYRCC 1 cut(s) 1012
BsrBI CCGCTC 2 cut(s) 201, 766
BsrDI GCAATG 1 cut(s) 458
BsrFI RCCGGY 1 cut(s) 121
BsrI ACTGG 1 cut(s) 1096
BssAI RCCGGY 1 cut(s) 121
BssECI CCNNGG 2 cut(s) 375, 464
BssMI GATC 4 cut(s) 94, 511, 537, 1057
BssNI GRCGYC 1 cut(s) 294
BssT1I CCWWGG 1 cut(s) 464
Bst4CI ACNGT 7 cut(s) 140, 644, 716, 727, 834, 1006, 1273
Bst6I CTCTTC 3 cut(s) 443, 1279, 1460
BstACI GRCGYC 1 cut(s) 294
BstAPI GCANNNNNTGC 2 cut(s) 460, 1322
BstC8I GCNNGC 3 cut(s) 123, 1344, 1389
BstDEI CTNAG 9 cut(s) 69, 102, 195, 312, 402, 669, 891, 1173, 1428
BstDSI CCRYGG 1 cut(s) 464
BstEII GGTNACC 1 cut(s) 584
BstF5I GGATG 3 cut(s) 586, 693, 1059
BstKTI GATC 4 cut(s) 97, 514, 540, 1060
BstMAI GTCTC 5 cut(s) 57, 1095, 1194, 1412, 1462
BstMBI GATC 4 cut(s) 94, 511, 537, 1057
BstMWI GCNNNNNNNGC 8 cut(s) 286, 317, 460, 1021, 1286, 1322, 1343, 1460
BstNSI RCATGY 3 cut(s) 412, 1165, 1438
BstPI GGTNACC 1 cut(s) 584
BstSCI CCNGG 1 cut(s) 81
BstSFI CTRYAG 2 cut(s) 640, 712
BstV1I GCAGC 4 cut(s) 138, 304, 466, 1463
BstV2I GAAGAC 2 cut(s) 875, 914
BstX2I RGATCY 2 cut(s) 537, 1057
BstXI CCANNNNNNTGG 1 cut(s) 465
BstYI RGATCY 2 cut(s) 537, 1057
BsuRI GGCC 6 cut(s) 289, 609, 984, 1311, 1369, 1391
BtgI CCRYGG 1 cut(s) 464
BtsCI GGATG 3 cut(s) 586, 693, 1059
Cac8I GCNNGC 3 cut(s) 123, 1344, 1389
CaiI CAGNNNCTG 1 cut(s) 1479
CciI TCATGA 2 cut(s) 544, 1072
Cfr10I RCCGGY 1 cut(s) 121
Cfr13I GGNCC 4 cut(s) 112, 736, 982, 1390
CseI GACGC 1 cut(s) 302
Csp6I GTAC 3 cut(s) 136, 406, 645
CviAII CATG 9 cut(s) 409, 465, 545, 770, 971, 1021, 1073, 1162, 1435
CviQI GTAC 3 cut(s) 136, 406, 645
DdeI CTNAG 9 cut(s) 69, 102, 195, 312, 402, 669, 891, 1173, 1428
DpnI GATC 4 cut(s) 96, 513, 539, 1059
DpnII GATC 4 cut(s) 94, 511, 537, 1057
DriI GACNNNNNGTC 1 cut(s) 49
EaeI YGGCCR 3 cut(s) 287, 1309, 1367
Eam1104I CTCTTC 3 cut(s) 443, 1279, 1460
Eam1105I GACNNNNNGTC 1 cut(s) 49
EarI CTCTTC 3 cut(s) 443, 1279, 1460
Eco130I CCWWGG 1 cut(s) 464
Eco47I GGWCC 2 cut(s) 112, 736
Eco57I CTGAAG 1 cut(s) 869
Eco91I GGTNACC 1 cut(s) 584
EcoO109I RGGNCCY 1 cut(s) 1390
EcoO65I GGTNACC 1 cut(s) 584
EcoT14I CCWWGG 1 cut(s) 464
EcoT22I ATGCAT 1 cut(s) 559
ErhI CCWWGG 1 cut(s) 464
Esp3I CGTCTC 2 cut(s) 57, 1095
FaeI CATG 9 cut(s) 412, 468, 548, 773, 974, 1024, 1076, 1165, 1438
FalI AAGNNNNNCTT 4 cut(s) 422, 454, 1305, 1337
FaqI GGGAC 2 cut(s) 44, 125
FatI CATG 9 cut(s) 408, 464, 544, 769, 970, 1020, 1072, 1161, 1434
FauI CCCGC 2 cut(s) 313, 1476
FbaI TGATCA 1 cut(s) 511
Fnu4HI GCNGC 5 cut(s) 152, 202, 318, 455, 1452
FokI GGATG 3 cut(s) 593, 680, 1066
Fsp4HI GCNGC 5 cut(s) 152, 202, 318, 455, 1452
FspBI CTAG 2 cut(s) 600, 897
GluI GCNGC 5 cut(s) 152, 202, 318, 455, 1452
GsaI CCCAGC 1 cut(s) 301
HaeIII GGCC 6 cut(s) 289, 609, 984, 1311, 1369, 1391
HapII CCGG 4 cut(s) 83, 122, 290, 532
HgaI GACGC 1 cut(s) 302
Hin1I GRCGYC 1 cut(s) 294
Hin1II CATG 9 cut(s) 412, 468, 548, 773, 974, 1024, 1076, 1165, 1438
HindIII AAGCTT 1 cut(s) 236
HinfI GANTC 2 cut(s) 355, 815
HpaII CCGG 4 cut(s) 83, 122, 290, 532
HphI GGTGA 1 cut(s) 596
Hpy166II GTNNAC 1 cut(s) 226
Hpy188I TCNGA 7 cut(s) 72, 144, 181, 196, 360, 892, 1412
Hpy188III TCNNGA 6 cut(s) 545, 626, 1073, 1136, 1213, 1430
Hpy8I GTNNAC 1 cut(s) 226
Hpy99I CGWCG 2 cut(s) 47, 166
HpyAV CCTTC 6 cut(s) 151, 821, 1033, 1103, 1272, 1300
HpyCH4III ACNGT 7 cut(s) 140, 644, 716, 727, 834, 1006, 1273
HpyF10VI GCNNNNNNNGC 8 cut(s) 286, 317, 460, 1021, 1286, 1322, 1343, 1460
HpyF3I CTNAG 9 cut(s) 69, 102, 195, 312, 402, 669, 891, 1173, 1428
Hsp92I GRCGYC 1 cut(s) 294
Hsp92II CATG 9 cut(s) 412, 468, 548, 773, 974, 1024, 1076, 1165, 1438
KroI GCCGGC 1 cut(s) 121
KroNI GCCGGC 1 cut(s) 123
Ksp22I TGATCA 1 cut(s) 511
Kzo9I GATC 4 cut(s) 94, 511, 537, 1057
LguI GCTCTTC 1 cut(s) 1279
LmnI GCTCC 2 cut(s) 771, 1448
Lsp1109I GCAGC 4 cut(s) 138, 304, 466, 1463
LweI GCATC 6 cut(s) 442, 838, 974, 1324, 1414, 1485
MaeI CTAG 2 cut(s) 600, 897
MaeIII GTNAC 1 cut(s) 584
MalI GATC 4 cut(s) 96, 513, 539, 1059
MbiI CCGCTC 2 cut(s) 201, 766
MboI GATC 4 cut(s) 94, 511, 537, 1057
MboII GAAGA 7 cut(s) 430, 547, 875, 914, 1118, 1296, 1477
MfeI CAATTG 1 cut(s) 1221
MflI RGATCY 2 cut(s) 537, 1057
MlsI TGGCCA 2 cut(s) 1311, 1369
MluCI AATT 5 cut(s) 182, 649, 857, 1178, 1221
MluNI TGGCCA 2 cut(s) 1311, 1369
MmeI TCCRAC 1 cut(s) 714
Mox20I TGGCCA 2 cut(s) 1311, 1369
Mph1103I ATGCAT 1 cut(s) 559
MroNI GCCGGC 1 cut(s) 121
MroXI GAANNNNTTC 1 cut(s) 170
MscI TGGCCA 2 cut(s) 1311, 1369
MseI TTAA 5 cut(s) 915, 977, 1241, 1440, 1489
MslI CAYNNNNRTG 1 cut(s) 463
Msp20I TGGCCA 2 cut(s) 1311, 1369
MspA1I CMGCKG 1 cut(s) 932
MspI CCGG 4 cut(s) 83, 122, 290, 532
MspR9I CCNGG 1 cut(s) 83
MunI CAATTG 1 cut(s) 1221
Mva1269I GAATGC 3 cut(s) 559, 1222, 1376
MwoI GCNNNNNNNGC 8 cut(s) 286, 317, 460, 1021, 1286, 1322, 1343, 1460
NaeI GCCGGC 1 cut(s) 123
NciI CCSGG 1 cut(s) 83
NcoI CCATGG 1 cut(s) 464
NdeII GATC 4 cut(s) 94, 511, 537, 1057
NgoMIV GCCGGC 1 cut(s) 121
NlaIII CATG 9 cut(s) 412, 468, 548, 773, 974, 1024, 1076, 1165, 1438
NlaIV GGNNCC 2 cut(s) 113, 1014
NmeAIII GCCGAG 1 cut(s) 400
NmuCI GTSAC 1 cut(s) 584
NsiI ATGCAT 1 cut(s) 559
NspI RCATGY 3 cut(s) 412, 1165, 1438
PagI TCATGA 2 cut(s) 544, 1072
PciI ACATGT 2 cut(s) 408, 1161
PciSI GCTCTTC 1 cut(s) 1279
PctI GAATGC 3 cut(s) 559, 1222, 1376
PdiI GCCGGC 1 cut(s) 123
PdmI GAANNNNTTC 1 cut(s) 170
PfeI GAWTC 2 cut(s) 355, 815
PkrI GCNGC 5 cut(s) 153, 203, 319, 456, 1453
PscI ACATGT 2 cut(s) 408, 1161
PspEI GGTNACC 1 cut(s) 584
PspFI CCCAGC 1 cut(s) 297
PspN4I GGNNCC 2 cut(s) 113, 1014
PspPI GGNCC 4 cut(s) 112, 736, 982, 1390
PstNI CAGNNNCTG 1 cut(s) 1479
PsuI RGATCY 2 cut(s) 537, 1057
PvuII CAGCTG 1 cut(s) 932
RsaI GTAC 3 cut(s) 137, 407, 646
RsaNI GTAC 3 cut(s) 136, 406, 645
RseI CAYNNNNRTG 1 cut(s) 463
SapI GCTCTTC 1 cut(s) 1279
SaqAI TTAA 5 cut(s) 915, 977, 1241, 1440, 1489
SatI GCNGC 5 cut(s) 152, 202, 318, 455, 1452
Sau3AI GATC 4 cut(s) 94, 511, 537, 1057
Sau96I GGNCC 4 cut(s) 112, 736, 982, 1390
ScaI AGTACT 1 cut(s) 646
ScrFI CCNGG 1 cut(s) 83
SfaNI GCATC 6 cut(s) 442, 838, 974, 1324, 1414, 1485
SfcI CTRYAG 2 cut(s) 640, 712
SinI GGWCC 2 cut(s) 112, 736
SmiMI CAYNNNNRTG 1 cut(s) 463
Sse9I AATT 5 cut(s) 182, 649, 857, 1178, 1221
SsiI CCGC 6 cut(s) 24, 154, 201, 320, 764, 1483
SspMI CTAG 2 cut(s) 600, 897
StyD4I CCNGG 1 cut(s) 81
StyI CCWWGG 1 cut(s) 464
TaaI ACNGT 7 cut(s) 140, 644, 716, 727, 834, 1006, 1273
TaqI TCGA 2 cut(s) 625, 777
TasI AATT 5 cut(s) 182, 649, 857, 1178, 1221
TatI WGTACW 3 cut(s) 135, 405, 644
TauI GCSGC 1 cut(s) 204
TfiI GAWTC 2 cut(s) 355, 815
Tru1I TTAA 5 cut(s) 915, 977, 1241, 1440, 1489
Tru9I TTAA 5 cut(s) 915, 977, 1241, 1440, 1489
TseFI GTSAC 1 cut(s) 584
TseI GCWGC 4 cut(s) 151, 317, 454, 1451
Tsp45I GTSAC 1 cut(s) 584
TspDTI ATGAA 6 cut(s) 399, 629, 807, 1061, 1119, 1319
TspGWI ACGGA 3 cut(s) 694, 1246, 1461
VpaK11BI GGWCC 2 cut(s) 112, 736
XapI RAATTY 2 cut(s) 182, 1178
XceI RCATGY 3 cut(s) 412, 1165, 1438
XmnI GAANNNNTTC 1 cut(s) 170
XspI CTAG 2 cut(s) 600, 897
ZrmI AGTACT 1 cut(s) 646
Zsp2I ATGCAT 1 cut(s) 559
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.