Prupe.5G061800_v2.0.a1

ethylene-responsive transcription factor

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
6745843 .. 6747365
1523 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G061800.1

Sequence Viewer

Length: 846 bp
ATGTTCGGACAGAGTGGAACAGACGCGGATATCACACTCCTCGACTCGATTCGGCGCCACTTGCTGGGTGAGACGGATCTACGGGTCGGAAATTCGATGGCCAACTCGATTTCGGGTCCCATTTTCTCCCGGAGCTCCAGCTTCAGCAGCCTGTACCCGTGCTTGACCGAAAACTGGGGCGATTTGCCGCTCAAGGAGGACGATTCCGAGGACATGGTGCTCTACGGTGTTCTAAGGGACGCCGTTAACGTCGGTTGGGTCCCGTCGCTCGGGTCCGGGTCGACTGATACACGTTCTTTAAACTTTTCAGTAAAATTGGAACCGGAGGTTTTGACGCCGGTGAGTACAGTGCCGGAGAAAAAACCGGCACCGGTTCAACCGGCCCGACCGGTTCAGCAGCCGTCTCAAGCCGGTCCAGCTGTGGTTCCCGCCAAAGGGAAGCATTACAGGGGCGTACGGCAACGGCCGTGGGGCAAGTTCGCCGCCGAAATTCGGGACCCGGCAAAGAATGGCGCGAGGGTTTGGCTTGGAACTTTTGAAACGGCTGAGGATGCGGCTTTGGCTTACGACAGAGCCGCTTATAGAATGCGCGGCTCCAGAGCTTTGTTGAATTTCCCGCTCCGGGTTAACTCGGGAGAGCCTGATCCGGTTCGGGTGACGTCGAAGCGGTCGTCGCCTGAGCCATCCTCGTCTTCGGAGAGCGGTTCTCCAAAGAGGAGGAAGAAGGTAGCTGTTTTGAACCCGGCTCAGGCCGGGTTGGAAATGGGAGCTGGAATTGGGCAGGAGCAAGTGGGAGGCCAAGTGGTGGTGTCGTGTACACGTGGCGAGCAGTTATTAGTGAGCTGA

Protein Analysis

282

Amino Acids

30.16

Weight (kDa)

9.09

Isoelectric Point (pI)

59.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0011966)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 662
AccB1I GGYRCC 2 cut(s) 54, 367
AccB7I CCANNNNNTGG 2 cut(s) 64, 805
AccBSI CCGCTC 3 cut(s) 190, 619, 702
AccI GTMKAC 1 cut(s) 281
AccII CGCG 3 cut(s) 26, 515, 591
AclWI GGATC 2 cut(s) 84, 638
AcoI YGGCCR 2 cut(s) 99, 464
AcsI RAATTY 3 cut(s) 91, 489, 610
AcuI CTGAAG 1 cut(s) 127
AcvI CACGTG 1 cut(s) 821
AcyI GRCGYC 4 cut(s) 55, 240, 335, 659
AfaI GTAC 4 cut(s) 155, 346, 456, 817
AfiI CCNNNNNNNGG 9 cut(s) 64, 174, 269, 434, 435, 492, 622, 748, 805
AflIII ACRYGT 2 cut(s) 290, 818
AgeI ACCGGT 2 cut(s) 370, 388
AgsI TTSAA 4 cut(s) 377, 539, 610, 739
AluBI AGCT 7 cut(s) 135, 141, 419, 602, 731, 770, 843
AluI AGCT 7 cut(s) 135, 141, 419, 602, 731, 770, 843
Alw21I GWGCWC 2 cut(s) 137, 222
Alw26I GTCTC 2 cut(s) 65, 408
AlwI GGATC 2 cut(s) 84, 638
Ama87I CYCGRG 2 cut(s) 269, 631
AoxI GGCC 5 cut(s) 99, 381, 464, 750, 796
ApeKI GCWGC 2 cut(s) 147, 397
ApoI RAATTY 3 cut(s) 91, 489, 610
ArsI GACNNNNNNTTYG 2 cut(s) 656, 688
AsiGI ACCGGT 2 cut(s) 370, 388
AspLEI GCGC 3 cut(s) 57, 515, 591
AspS9I GGNCC 6 cut(s) 116, 259, 273, 382, 413, 496
AsuC2I CCSGG 6 cut(s) 130, 277, 500, 623, 743, 754
AsuHPI GGTGA 3 cut(s) 80, 352, 667
AvaI CYCGRG 2 cut(s) 269, 631
AvaII GGWCC 5 cut(s) 116, 259, 273, 413, 496
BalI TGGCCA 1 cut(s) 101
BanI GGYRCC 2 cut(s) 54, 367
BanII GRGCYC 1 cut(s) 137
BbrPI CACGTG 1 cut(s) 821
BbsI GAAGAC 1 cut(s) 684
Bbv12I GWGCWC 2 cut(s) 137, 222
BbvCI CCTCAGC 1 cut(s) 546
BbvI GCAGC 2 cut(s) 159, 409
BccI CCATC 2 cut(s) 91, 691
BceAI ACGGC 6 cut(s) 227, 385, 451, 473, 479, 558
BcnI CCSGG 6 cut(s) 130, 277, 500, 623, 743, 754
BcoDI GTCTC 2 cut(s) 65, 408
BfoI RGCGCY 1 cut(s) 58
BisI GCNGC 7 cut(s) 148, 188, 398, 483, 555, 576, 592
BlsI GCNGC 7 cut(s) 149, 189, 399, 484, 556, 577, 593
Bme1390I CCNGG 6 cut(s) 130, 277, 500, 623, 743, 754
Bme18I GGWCC 5 cut(s) 116, 259, 273, 413, 496
BmeT110I CYCGRG 2 cut(s) 269, 631
BmgT120I GGNCC 6 cut(s) 116, 259, 273, 382, 413, 496
BmrFI CCNGG 6 cut(s) 130, 277, 500, 623, 743, 754
BmrI ACTGGG 1 cut(s) 184
BmsI GCATC 1 cut(s) 541
BmuI ACTGGG 1 cut(s) 184
BpiI GAAGAC 1 cut(s) 684
BplI GAGNNNNNCTC 4 cut(s) 671, 703, 691, 723
BpmI CTGGAG 2 cut(s) 121, 580
Bpu10I CCTNAGC 3 cut(s) 546, 678, 747
BpuEI CTTGAG 2 cut(s) 176, 390
BpuMI CCSGG 6 cut(s) 130, 277, 500, 623, 743, 754
BsaAI YACGTR 1 cut(s) 821
BsaHI GRCGYC 4 cut(s) 55, 240, 335, 659
BsaJI CCNNGG 2 cut(s) 207, 467
BsaWI WCCGGW 4 cut(s) 322, 370, 388, 646
BsaXI ACNNNNNCTCC 2 cut(s) 786, 816
Bsc4I CCNNNNNNNGG 9 cut(s) 64, 174, 269, 434, 435, 492, 622, 748, 805
Bse118I RCCGGY 6 cut(s) 337, 364, 370, 379, 388, 410
Bse1I ACTGG 1 cut(s) 179
BseDI CCNNGG 2 cut(s) 207, 467
BseGI GGATG 2 cut(s) 556, 683
BseLI CCNNNNNNNGG 9 cut(s) 64, 174, 269, 434, 435, 492, 622, 748, 805
BseMII CTCAG 3 cut(s) 537, 669, 761
BseNI ACTGG 1 cut(s) 179
BseRI GAGGAG 2 cut(s) 29, 730
BseX3I CGGCCG 1 cut(s) 464
BseXI GCAGC 2 cut(s) 159, 409
BseYI CCCAGC 1 cut(s) 64
Bsh1236I CGCG 3 cut(s) 26, 515, 591
Bsh1285I CGRYCG 3 cut(s) 389, 467, 671
BshFI GGCC 5 cut(s) 101, 383, 466, 752, 798
BshNI GGYRCC 2 cut(s) 54, 367
BshTI ACCGGT 2 cut(s) 370, 388
BsiEI CGRYCG 3 cut(s) 389, 467, 671
BsiHKAI GWGCWC 2 cut(s) 137, 222
BsiHKCI CYCGRG 2 cut(s) 269, 631
BsiWI CGTACG 1 cut(s) 454
BslFI GGGAC 4 cut(s) 102, 245, 251, 509
BslI CCNNNNNNNGG 9 cut(s) 64, 174, 269, 434, 435, 492, 622, 748, 805
BsmAI GTCTC 2 cut(s) 65, 408
BsmBI CGTCTC 2 cut(s) 65, 408
BsmFI GGGAC 4 cut(s) 102, 245, 251, 509
BsmI GAATGC 1 cut(s) 591
BsnI GGCC 5 cut(s) 101, 383, 466, 752, 798
BsoBI CYCGRG 2 cut(s) 269, 631
Bsp1286I GDGCHC 2 cut(s) 137, 222
Bsp1407I TGTACA 1 cut(s) 815
Bsp143I GATC 2 cut(s) 76, 643
BspANI GGCC 5 cut(s) 101, 383, 466, 752, 798
BspCNI CTCAG 3 cut(s) 538, 670, 760
BspFNI CGCG 3 cut(s) 26, 515, 591
BspPI GGATC 2 cut(s) 84, 638
BspT107I GGYRCC 2 cut(s) 54, 367
BsrBI CCGCTC 3 cut(s) 190, 619, 702
BsrFI RCCGGY 6 cut(s) 337, 364, 370, 379, 388, 410
BsrGI TGTACA 1 cut(s) 815
BsrI ACTGG 1 cut(s) 179
BssAI RCCGGY 6 cut(s) 337, 364, 370, 379, 388, 410
BssECI CCNNGG 2 cut(s) 207, 467
BssMI GATC 2 cut(s) 76, 643
BssNI GRCGYC 4 cut(s) 55, 240, 335, 659
Bst4CI ACNGT 2 cut(s) 227, 349
BstACI GRCGYC 4 cut(s) 55, 240, 335, 659
BstAUI TGTACA 1 cut(s) 815
BstBAI YACGTR 1 cut(s) 821
BstC8I GCNNGC 1 cut(s) 827
BstDEI CTNAG 4 cut(s) 233, 546, 678, 747
BstDSI CCRYGG 1 cut(s) 467
BstF5I GGATG 2 cut(s) 556, 683
BstFNI CGCG 3 cut(s) 26, 515, 591
BstH2I RGCGCY 1 cut(s) 58
BstHHI GCGC 3 cut(s) 57, 515, 591
BstKTI GATC 2 cut(s) 79, 646
BstMAI GTCTC 2 cut(s) 65, 408
BstMBI GATC 2 cut(s) 76, 643
BstMCI CGRYCG 3 cut(s) 389, 467, 671
BstMWI GCNNNNNNNGC 6 cut(s) 61, 147, 416, 551, 560, 673
BstSCI CCNGG 6 cut(s) 128, 275, 498, 621, 741, 752
BstUI CGCG 3 cut(s) 26, 515, 591
BstV1I GCAGC 2 cut(s) 159, 409
BstV2I GAAGAC 1 cut(s) 684
BstX2I RGATCY 1 cut(s) 76
BstYI RGATCY 1 cut(s) 76
BstZI CGGCCG 1 cut(s) 464
BsuRI GGCC 5 cut(s) 101, 383, 466, 752, 798
BtgI CCRYGG 1 cut(s) 467
BtsCI GGATG 2 cut(s) 556, 683
BtsIMutI CAGTG 1 cut(s) 354
Cac8I GCNNGC 1 cut(s) 827
CfoI GCGC 3 cut(s) 57, 515, 591
Cfr10I RCCGGY 6 cut(s) 337, 364, 370, 379, 388, 410
Cfr13I GGNCC 6 cut(s) 116, 259, 273, 382, 413, 496
CseI GACGC 3 cut(s) 32, 248, 343
Csp6I GTAC 4 cut(s) 154, 345, 455, 816
CspAI ACCGGT 2 cut(s) 370, 388
CspCI CAANNNNNGTGG 2 cut(s) 449, 484
CviAII CATG 1 cut(s) 214
CviQI GTAC 4 cut(s) 154, 345, 455, 816
DdeI CTNAG 4 cut(s) 233, 546, 678, 747
DinI GGCGCC 1 cut(s) 56
DpnI GATC 2 cut(s) 78, 645
DpnII GATC 2 cut(s) 76, 643
DraI TTTAAA 1 cut(s) 300
EaeI YGGCCR 2 cut(s) 99, 464
EagI CGGCCG 1 cut(s) 464
Ecl136II GAGCTC 1 cut(s) 135
EclXI CGGCCG 1 cut(s) 464
Eco24I GRGCYC 1 cut(s) 137
Eco32I GATATC 1 cut(s) 31
Eco47I GGWCC 5 cut(s) 116, 259, 273, 413, 496
Eco52I CGGCCG 1 cut(s) 464
Eco53kI GAGCTC 1 cut(s) 135
Eco57I CTGAAG 1 cut(s) 127
Eco72I CACGTG 1 cut(s) 821
Eco88I CYCGRG 2 cut(s) 269, 631
EcoICRI GAGCTC 1 cut(s) 135
EcoO109I RGGNCCY 3 cut(s) 116, 259, 496
EcoRV GATATC 1 cut(s) 31
EcoT38I GRGCYC 1 cut(s) 137
EgeI GGCGCC 1 cut(s) 56
EheI GGCGCC 1 cut(s) 56
Esp3I CGTCTC 2 cut(s) 65, 408
FaeI CATG 1 cut(s) 217
FaiI YATR 2 cut(s) 215, 582
FaqI GGGAC 4 cut(s) 102, 245, 251, 509
FatI CATG 1 cut(s) 213
FauI CCCGC 2 cut(s) 436, 624
FblI GTMKAC 1 cut(s) 281
Fnu4HI GCNGC 7 cut(s) 148, 188, 398, 483, 555, 576, 592
FokI GGATG 2 cut(s) 563, 670
FriOI GRGCYC 1 cut(s) 137
Fsp4HI GCNGC 7 cut(s) 148, 188, 398, 483, 555, 576, 592
GlaI GCGC 3 cut(s) 56, 514, 590
GluI GCNGC 7 cut(s) 148, 188, 398, 483, 555, 576, 592
GsaI CCCAGC 1 cut(s) 68
GsuI CTGGAG 2 cut(s) 121, 580
HaeII RGCGCY 1 cut(s) 58
HaeIII GGCC 5 cut(s) 101, 383, 466, 752, 798
HgaI GACGC 3 cut(s) 32, 248, 343
HhaI GCGC 3 cut(s) 57, 515, 591
Hin1I GRCGYC 4 cut(s) 55, 240, 335, 659
Hin1II CATG 1 cut(s) 217
Hin6I GCGC 3 cut(s) 55, 513, 589
HinP1I GCGC 3 cut(s) 55, 513, 589
HincII GTYRAC 3 cut(s) 247, 282, 628
HindII GTYRAC 3 cut(s) 247, 282, 628
HinfI GANTC 3 cut(s) 44, 49, 203
HpaI GTTAAC 2 cut(s) 247, 628
HphI GGTGA 3 cut(s) 80, 352, 667
Hpy166II GTNNAC 5 cut(s) 247, 282, 628, 816, 818
Hpy188I TCNGA 4 cut(s) 8, 89, 208, 697
Hpy188III TCNNGA 3 cut(s) 494, 597, 633
Hpy8I GTNNAC 5 cut(s) 247, 282, 628, 816, 818
Hpy99I CGWCG 4 cut(s) 254, 268, 664, 676
HpyAV CCTTC 1 cut(s) 718
HpyCH4III ACNGT 2 cut(s) 227, 349
HpyCH4IV ACGT 4 cut(s) 249, 292, 659, 820
HpyF10VI GCNNNNNNNGC 6 cut(s) 61, 147, 416, 551, 560, 673
HpyF3I CTNAG 4 cut(s) 233, 546, 678, 747
HpySE526I ACGT 4 cut(s) 249, 292, 659, 820
Hsp92I GRCGYC 4 cut(s) 55, 240, 335, 659
Hsp92II CATG 1 cut(s) 217
HspAI GCGC 3 cut(s) 55, 513, 589
KasI GGCGCC 1 cut(s) 54
KflI GGGWCCC 3 cut(s) 116, 259, 496
KspAI GTTAAC 2 cut(s) 247, 628
Kzo9I GATC 2 cut(s) 76, 643
LmnI GCTCC 6 cut(s) 132, 140, 599, 624, 767, 784
Lsp1109I GCAGC 2 cut(s) 159, 409
LweI GCATC 1 cut(s) 541
MaeII ACGT 4 cut(s) 249, 292, 659, 820
MaeIII GTNAC 1 cut(s) 655
MalI GATC 2 cut(s) 78, 645
MbiI CCGCTC 3 cut(s) 190, 619, 702
MboI GATC 2 cut(s) 76, 643
MboII GAAGA 2 cut(s) 684, 733
MflI RGATCY 1 cut(s) 76
MhlI GDGCHC 2 cut(s) 137, 222
MlsI TGGCCA 1 cut(s) 101
MluCI AATT 5 cut(s) 91, 314, 489, 610, 774
MluNI TGGCCA 1 cut(s) 101
Mly113I GGCGCC 1 cut(s) 55
MlyI GAGTC 1 cut(s) 38
MmeI TCCRAC 2 cut(s) 67, 738
Mox20I TGGCCA 1 cut(s) 101
MscI TGGCCA 1 cut(s) 101
MseI TTAA 3 cut(s) 246, 299, 627
Msp20I TGGCCA 1 cut(s) 101
MspA1I CMGCKG 1 cut(s) 419
MspR9I CCNGG 6 cut(s) 130, 277, 500, 623, 743, 754
Mva1269I GAATGC 1 cut(s) 591
MvnI CGCG 3 cut(s) 26, 515, 591
MwoI GCNNNNNNNGC 6 cut(s) 61, 147, 416, 551, 560, 673
NarI GGCGCC 1 cut(s) 55
NciI CCSGG 6 cut(s) 130, 277, 500, 623, 743, 754
NdeII GATC 2 cut(s) 76, 643
NlaIII CATG 1 cut(s) 217
NmuCI GTSAC 1 cut(s) 655
PcsI WCGNNNNNNNCGW 2 cut(s) 246, 668
PctI GAATGC 1 cut(s) 591
PfeI GAWTC 2 cut(s) 49, 203
Pfl23II CGTACG 1 cut(s) 454
PflMI CCANNNNNTGG 2 cut(s) 64, 805
PfoI TCCNGGA 1 cut(s) 128
PinAI ACCGGT 2 cut(s) 370, 388
PkrI GCNGC 7 cut(s) 149, 189, 399, 484, 556, 577, 593
PleI GAGTC 1 cut(s) 38
PluTI GGCGCC 1 cut(s) 58
PmaCI CACGTG 1 cut(s) 821
PmlI CACGTG 1 cut(s) 821
PpsI GAGTC 1 cut(s) 38
Ppu21I YACGTR 1 cut(s) 821
PpuMI RGGWCCY 3 cut(s) 116, 259, 496
Psp124BI GAGCTC 1 cut(s) 137
Psp5II RGGWCCY 3 cut(s) 116, 259, 496
PspCI CACGTG 1 cut(s) 821
PspFI CCCAGC 1 cut(s) 64
PspLI CGTACG 1 cut(s) 454
PspPI GGNCC 6 cut(s) 116, 259, 273, 382, 413, 496
PspPPI RGGWCCY 3 cut(s) 116, 259, 496
PsuI RGATCY 1 cut(s) 76
PvuII CAGCTG 1 cut(s) 419
RsaI GTAC 4 cut(s) 155, 346, 456, 817
RsaNI GTAC 4 cut(s) 154, 345, 455, 816
SacI GAGCTC 1 cut(s) 137
SalI GTCGAC 1 cut(s) 280
SaqAI TTAA 3 cut(s) 246, 299, 627
SatI GCNGC 7 cut(s) 148, 188, 398, 483, 555, 576, 592
Sau3AI GATC 2 cut(s) 76, 643
Sau96I GGNCC 6 cut(s) 116, 259, 273, 382, 413, 496
SchI GAGTC 1 cut(s) 38
ScrFI CCNGG 6 cut(s) 130, 277, 500, 623, 743, 754
SduI GDGCHC 2 cut(s) 137, 222
SfaNI GCATC 1 cut(s) 541
SfoI GGCGCC 1 cut(s) 56
SgrAI CRCCGGYG 1 cut(s) 337
SinI GGWCC 5 cut(s) 116, 259, 273, 413, 496
SmlI CTYRAG 2 cut(s) 191, 405
SmoI CTYRAG 2 cut(s) 191, 405
Sse9I AATT 5 cut(s) 91, 314, 489, 610, 774
SspDI GGCGCC 1 cut(s) 54
SstI GAGCTC 1 cut(s) 137
StyD4I CCNGG 6 cut(s) 128, 275, 498, 621, 741, 752
TaaI ACNGT 2 cut(s) 227, 349
TaiI ACGT 4 cut(s) 252, 295, 662, 823
TaqI TCGA 6 cut(s) 42, 47, 95, 107, 281, 662
TaqII GACCGA 1 cut(s) 182
TasI AATT 5 cut(s) 91, 314, 489, 610, 774
TatI WGTACW 2 cut(s) 344, 815
TauI GCSGC 5 cut(s) 190, 485, 557, 578, 594
TfiI GAWTC 2 cut(s) 49, 203
Tru1I TTAA 3 cut(s) 246, 299, 627
Tru9I TTAA 3 cut(s) 246, 299, 627
TscAI CASTG 1 cut(s) 354
TseFI GTSAC 1 cut(s) 655
TseI GCWGC 2 cut(s) 147, 397
Tsp45I GTSAC 1 cut(s) 655
TspGWI ACGGA 1 cut(s) 89
TspRI CASTG 1 cut(s) 354
Van91I CCANNNNNTGG 2 cut(s) 64, 805
VpaK11BI GGWCC 5 cut(s) 116, 259, 273, 413, 496
XapI RAATTY 3 cut(s) 91, 489, 610
XmiI GTMKAC 1 cut(s) 281
ZraI GACGTC 1 cut(s) 660
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.