Prupe.5G096200_v2.0.a1

Remorin, C-terminal region

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Forward (+)
10530177 .. 10531197
1021 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G096200.1

Sequence Viewer

Length: 510 bp
TCATATTTTGTGCATATTCTTCATCTAACATGTAAATTTCTCGATCATACGGTCGTACGAGAGAGTGCATACCCTGCTGTAAAGAAAGACATAACAGGAGGGGGTTCAACTGAGAGAGATGCATTGCATGCACAAATTGAAACAGAGAAACGGTTGGCCCTAATTAAAGCATGGGAGGAAAGTGAGAAAACAAAAGCAGAGAACAAGGCATATAGAAGAATGTCAACAGTAGAATTGTGGGAGGACAGCAAGAAAACTTCTGTGGAGGCAGAACTCAAAAAAATTGAGGAAAAATTTGAAAGAAACAAGGCAGAGTATGCTGAGAAAATGAAGAACAAAGTGACCGAAATTCACAAGGCAGGAGACGAAAGGAGAGCTTTCATTGAAGCCAAACAAAGAGAGCAATGCCCCAGGGTGGAGGAGACAGCTGCAAAGTTTCGTTCTACCGGAATTGCACTAAAGAAATTGCTACTTGGGTGCTTCATCAGCCAGCATTCTGCAGTTATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

170

Amino Acids

19.46

Weight (kDa)

9.02

Isoelectric Point (pI)

63.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0016080)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G23750 AT5G23750 AT5G23750
fragaria_vesca FvH4_5g02000 FvH4_5g02000
malus_domestica MD14G1099200.v1.1
prunus_persica Prupe.5G096200_v2.0.a1
rosa_chinensis RchiOBHm_Chr7g0198371
rosa_laevigata RLG00000003872
rosa_rugosa Rorug07G0047400 Rorug07G0047500
rosa_samantha Rh7AG170800 Rh7CG180500 Rh7DG173100
rosa_wichuraiana Rw7G014940

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 3 cut(s) 35, 293, 348
AfaI GTAC 1 cut(s) 57
AfiI CCNNNNNNNGG 1 cut(s) 415
AflIII ACRYGT 1 cut(s) 29
AgsI TTSAA 4 cut(s) 108, 140, 299, 386
AjnI CCWGG 1 cut(s) 410
AluBI AGCT 2 cut(s) 377, 428
AluI AGCT 2 cut(s) 377, 428
Alw26I GTCTC 2 cut(s) 357, 416
AoxI GGCC 1 cut(s) 156
ApeKI GCWGC 1 cut(s) 428
ApoI RAATTY 3 cut(s) 35, 293, 348
AspS9I GGNCC 1 cut(s) 157
BbvI GCAGC 1 cut(s) 415
BciT130I CCWGG 1 cut(s) 412
BcoDI GTCTC 2 cut(s) 357, 416
BfmI CTRYAG 1 cut(s) 498
BisI GCNGC 1 cut(s) 429
BlsI GCNGC 1 cut(s) 430
Bme1390I CCNGG 1 cut(s) 412
BmgT120I GGNCC 1 cut(s) 157
BmrFI CCNGG 1 cut(s) 412
BmsI GCATC 1 cut(s) 109
BsaJI CCNNGG 2 cut(s) 410, 411
BsaWI WCCGGW 1 cut(s) 446
Bsc4I CCNNNNNNNGG 1 cut(s) 415
Bse3DI GCAATG 2 cut(s) 122, 410
BseBI CCWGG 1 cut(s) 412
BseDI CCNNGG 2 cut(s) 410, 411
BseLI CCNNNNNNNGG 1 cut(s) 415
BseMI GCAATG 2 cut(s) 122, 410
BseMII CTCAG 2 cut(s) 102, 312
BseRI GAGGAG 1 cut(s) 434
BseXI GCAGC 1 cut(s) 415
Bsh1285I CGRYCG 1 cut(s) 54
BshFI GGCC 1 cut(s) 158
BsiEI CGRYCG 1 cut(s) 54
BsiSI CCGG 1 cut(s) 447
BsiWI CGTACG 1 cut(s) 55
BslI CCNNNNNNNGG 1 cut(s) 415
BsmAI GTCTC 2 cut(s) 357, 416
BsmBI CGTCTC 1 cut(s) 357
BsmI GAATGC 1 cut(s) 493
BsnI GGCC 1 cut(s) 158
Bsp143I GATC 1 cut(s) 43
BspANI GGCC 1 cut(s) 158
BspCNI CTCAG 2 cut(s) 103, 313
BspMAI CTGCAG 1 cut(s) 502
BsrDI GCAATG 2 cut(s) 122, 410
BssECI CCNNGG 2 cut(s) 410, 411
BssMI GATC 1 cut(s) 43
Bst2UI CCWGG 1 cut(s) 412
Bst4CI ACNGT 3 cut(s) 52, 153, 229
BstAPI GCANNNNNTGC 3 cut(s) 74, 128, 317
BstC8I GCNNGC 2 cut(s) 129, 491
BstDEI CTNAG 2 cut(s) 111, 321
BstKTI GATC 1 cut(s) 46
BstMAI GTCTC 2 cut(s) 357, 416
BstMBI GATC 1 cut(s) 43
BstMCI CGRYCG 1 cut(s) 54
BstMWI GCNNNNNNNGC 4 cut(s) 74, 128, 317, 486
BstNI CCWGG 1 cut(s) 412
BstNSI RCATGY 2 cut(s) 33, 131
BstSCI CCNGG 1 cut(s) 410
BstSFI CTRYAG 1 cut(s) 498
BstV1I GCAGC 1 cut(s) 415
BsuRI GGCC 1 cut(s) 158
Cac8I GCNNGC 2 cut(s) 129, 491
Cfr13I GGNCC 1 cut(s) 157
Csp6I GTAC 1 cut(s) 56
CviAII CATG 3 cut(s) 30, 128, 171
CviJI RGCY 5 cut(s) 158, 377, 389, 428, 489
CviKI_1 RGCY 5 cut(s) 158, 377, 389, 428, 489
CviQI GTAC 1 cut(s) 56
DdeI CTNAG 2 cut(s) 111, 321
DpnI GATC 1 cut(s) 45
DpnII GATC 1 cut(s) 43
EcoRII CCWGG 1 cut(s) 410
EcoT22I ATGCAT 1 cut(s) 124
Esp3I CGTCTC 1 cut(s) 357
FaeI CATG 3 cut(s) 33, 131, 174
FalI AAGNNNNNCTT 2 cut(s) 361, 393
FatI CATG 3 cut(s) 29, 127, 170
Fnu4HI GCNGC 1 cut(s) 429
Fsp4HI GCNGC 1 cut(s) 429
GluI GCNGC 1 cut(s) 429
HaeIII GGCC 1 cut(s) 158
HapII CCGG 1 cut(s) 447
Hin1II CATG 3 cut(s) 33, 131, 174
HincII GTYRAC 1 cut(s) 225
HindII GTYRAC 1 cut(s) 225
HpaII CCGG 1 cut(s) 447
Hpy166II GTNNAC 1 cut(s) 225
Hpy188III TCNNGA 1 cut(s) 41
Hpy8I GTNNAC 1 cut(s) 225
HpyCH4III ACNGT 3 cut(s) 52, 153, 229
HpyCH4V TGCA 8 cut(s) 13, 68, 122, 127, 131, 431, 455, 500
HpyF10VI GCNNNNNNNGC 4 cut(s) 74, 128, 317, 486
HpyF3I CTNAG 2 cut(s) 111, 321
Hsp92II CATG 3 cut(s) 33, 131, 174
Kzo9I GATC 1 cut(s) 43
LpnPI CCDG 7 cut(s) 81, 87, 345, 397, 424, 460, 503
Lsp1109I GCAGC 1 cut(s) 415
LweI GCATC 1 cut(s) 109
MaeIII GTNAC 1 cut(s) 340
MalI GATC 1 cut(s) 45
MboI GATC 1 cut(s) 43
MboII GAAGA 3 cut(s) 11, 228, 343
MluCI AATT 9 cut(s) 35, 135, 162, 233, 282, 293, 348, 450, 464
MnlI CCTC 6 cut(s) 92, 169, 235, 259, 280, 412
Mph1103I ATGCAT 1 cut(s) 124
MseI TTAA 1 cut(s) 165
MspA1I CMGCKG 1 cut(s) 428
MspI CCGG 1 cut(s) 447
MspR9I CCNGG 1 cut(s) 412
Mva1269I GAATGC 1 cut(s) 493
MvaI CCWGG 1 cut(s) 412
MwoI GCNNNNNNNGC 4 cut(s) 74, 128, 317, 486
NdeII GATC 1 cut(s) 43
NlaIII CATG 3 cut(s) 33, 131, 174
NmuCI GTSAC 1 cut(s) 340
NsiI ATGCAT 1 cut(s) 124
NspI RCATGY 2 cut(s) 33, 131
PaeI GCATGC 1 cut(s) 131
PasI CCCWGGG 1 cut(s) 411
PciI ACATGT 1 cut(s) 29
PctI GAATGC 1 cut(s) 493
Pfl23II CGTACG 1 cut(s) 55
PkrI GCNGC 1 cut(s) 430
PscI ACATGT 1 cut(s) 29
Psp6I CCWGG 1 cut(s) 410
PspGI CCWGG 1 cut(s) 410
PspLI CGTACG 1 cut(s) 55
PspPI GGNCC 1 cut(s) 157
PstI CTGCAG 1 cut(s) 502
PvuII CAGCTG 1 cut(s) 428
RsaI GTAC 1 cut(s) 57
RsaNI GTAC 1 cut(s) 56
SaqAI TTAA 1 cut(s) 165
SatI GCNGC 1 cut(s) 429
Sau3AI GATC 1 cut(s) 43
Sau96I GGNCC 1 cut(s) 157
ScrFI CCNGG 1 cut(s) 412
SetI ASST 2 cut(s) 379, 430
SfaNI GCATC 1 cut(s) 109
SfcI CTRYAG 1 cut(s) 498
SphI GCATGC 1 cut(s) 131
Sse9I AATT 9 cut(s) 35, 135, 162, 233, 282, 293, 348, 450, 464
StyD4I CCNGG 1 cut(s) 410
TaaI ACNGT 3 cut(s) 52, 153, 229
TaqI TCGA 1 cut(s) 42
TaqII GACCGA 1 cut(s) 359
TasI AATT 9 cut(s) 35, 135, 162, 233, 282, 293, 348, 450, 464
Tru1I TTAA 1 cut(s) 165
Tru9I TTAA 1 cut(s) 165
TseFI GTSAC 1 cut(s) 340
TseI GCWGC 1 cut(s) 428
Tsp45I GTSAC 1 cut(s) 340
TspDTI ATGAA 4 cut(s) 11, 344, 370, 472
XapI RAATTY 3 cut(s) 35, 293, 348
XceI RCATGY 2 cut(s) 33, 131
Zsp2I ATGCAT 1 cut(s) 124
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.