Prupe.5G098300_v2.0.a1

Xyloglucan galactosyltransferase KATAMARI1

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Forward (+)
10676972 .. 10678711
1740 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G098300.1

Sequence Viewer

Length: 1608 bp
ATGGCCAGTATTTCCATGTCCAAAAGAAAATCCAAACTCACCAGAAAACCAGACCCAAAAGAAGTCTGCAACTGTGTCATTGTTCTGTTCAAGTTTCTCCATCGAATCCCGGCTGCTTTTCTCATTCTCTTTCTTATCTACCTCTGGTCTTCCTCCACCACCATTATCTCCGGCAACATTGTTCACATTTGTGTGTCGTCGCGAAAGCTCAACGATCATTACTGCCTATCTGCTGGTAAAACCCAACCCAATTTTGAAATCCCAATTCCTATAATCAATAATAGCTCCATTTACCTCCAAACTCCAAACCAGCTACTTATGAGGAATGGAGAGAACAAAGACAGAGAAGAGGAGATTGCAAATGCAAAGAAGGAAGTCGAAGAACAGCTTCGACTGCACAGATCATGGATATCAGAAAACAAGCAAGCAGAGTGTGGAGGGAGGGGTGTATATGTGTATGATCTGCCCTCAAAGTTTAATAAGGATTTGGTAGGTCAATGCACAGACATGGTTCCATGGATGGACTTCTGCAAGTACTTCAAAAATGAGGCCTTGGGAGAACCAATTCCTAAGCTTGGAAATGGTTGGTACCAGACACATCAGTATTCATTGGAGCCAATATTCCATCAAAGGGTTTTGAAGCATCCTTGCAGGATTTACAATGAGAATGAAGCCAAACTGTTTTATGTCCCATTTTATGGTGGCTTGGATATTCTAAGATGGCATTTTAAGAATGTTTCCAATGATGTGAAAGATGCTTTGAGTTTGGAGCTCATAGCTTGGCTTGAGAAACAAAAACCATGGGCTAAGAATTCAGGTAAAGATCATGTAGTAGTGTTGGGGAAGGTTTCATGGGATTTTAGGAGAAAGGACGGTTCATGGGGAACTAGACTGTTGGAGATTGACCAAATGGAAAACCCAATAAAGCTTTTGATTGAGAGGCAACCATGGCAGCCAAATGACATTGGCATTCCACATCCAACATACTTCCATCCACACTCAGATGATGATATCATGGCATGGCAATGGAAGATCATCAGTTCATATCGAAAAAGGTTAGTGAGCTTTGCTGGGGCAGCAAGGCCTGGTGCAGCTGAGAGCATAAGGTCCATATTGATCAAACAATGCAATTCATCAGCAGACAATGGAAACCAATGCCACTTTCTTGATTGTAGTTCAGGTGGATGTGACCAGCCAGAGTCAGTCATCGAGCTTTTCATGGAGTCTGAATTCTGCTTGCAGCCTCCAGGGGACAGCCCAACTAGAAAATCCCTATTTGATTCTCTAATTTCGGGTTGCATACCTGTGCTATTCGATCCGTTTACAGCTTACTACCAGTATCCATGGCATCTACCAGAGGATCATGAAAAATACTCTGTGTTTGTAGACCAAGAAGAGGTGAGGCAAGTGAAGGTGAATGTGGTGGAAATGCTGATGAAGATTTCTAAGAAGGAGAAGGATGATATGAGGAGGTATATTGTGTATGAATTGCTACCTGGTTTGGTATATGGAGATTCAACTGCCAAGCTTGAGAAGTTTCAGGATGCATTTTCCATTATAATGAGTAGTCTGATGGAGAGAGTGACCAAAATGGATTCAACAGCATAA

Protein Analysis

536

Amino Acids

61.76

Weight (kDa)

7.2

Isoelectric Point (pI)

44.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012934)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1559
Acc65I GGTACC 1 cut(s) 588
AccB1I GGYRCC 1 cut(s) 588
AccB7I CCANNNNNTGG 1 cut(s) 698
AccI GTMKAC 1 cut(s) 1386
AccII CGCG 1 cut(s) 202
AclWI GGATC 2 cut(s) 1310, 1368
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 2 cut(s) 811, 1229
AfaI GTAC 2 cut(s) 536, 590
AfiI CCNNNNNNNGG 4 cut(s) 575, 631, 698, 1396
AgsI TTSAA 6 cut(s) 91, 257, 541, 640, 1518, 1599
AjnI CCWGG 3 cut(s) 1084, 1246, 1495
AjuI GAANNNNNNNTTGG 2 cut(s) 1146, 1178
AleI CACNNNNGTG 1 cut(s) 189
Alw21I GWGCWC 1 cut(s) 774
AlwI GGATC 2 cut(s) 1310, 1368
AoxI GGCC 3 cut(s) 3, 549, 1082
ApeKI GCWGC 5 cut(s) 113, 952, 1076, 1091, 1240
ApoI RAATTY 2 cut(s) 811, 1229
Asp700I GAANNNNTTC 2 cut(s) 387, 564
Asp718I GGTACC 1 cut(s) 588
AspS9I GGNCC 1 cut(s) 1107
AsuC2I CCSGG 1 cut(s) 110
AsuHPI GGTGA 3 cut(s) 31, 1411, 1426
AvaII GGWCC 1 cut(s) 1107
BalI TGGCCA 1 cut(s) 5
BanI GGYRCC 1 cut(s) 588
BanII GRGCYC 1 cut(s) 774
BbsI GAAGAC 1 cut(s) 141
Bbv12I GWGCWC 1 cut(s) 774
BbvI GCAGC 5 cut(s) 100, 964, 1088, 1103, 1252
BccI CCATC 6 cut(s) 108, 514, 633, 714, 999, 1567
BciT130I CCWGG 3 cut(s) 1086, 1248, 1497
BciVI GTATCC 1 cut(s) 1350
BclI TGATCA 1 cut(s) 1116
BcnI CCSGG 1 cut(s) 110
BfaI CTAG 2 cut(s) 888, 1263
BfuI GTATCC 1 cut(s) 1350
BisI GCNGC 5 cut(s) 114, 953, 1077, 1092, 1241
BlsI GCNGC 5 cut(s) 115, 954, 1078, 1093, 1242
BmcAI AGTACT 1 cut(s) 536
Bme1390I CCNGG 4 cut(s) 110, 1086, 1248, 1497
Bme18I GGWCC 1 cut(s) 1107
BmgT120I GGNCC 1 cut(s) 1107
BmiI GGNNCC 3 cut(s) 513, 590, 615
BmrFI CCNGG 4 cut(s) 110, 1086, 1248, 1497
BmsI GCATC 4 cut(s) 652, 745, 1357, 1534
BpiI GAAGAC 1 cut(s) 141
BpmI CTGGAG 1 cut(s) 1230
Bpu10I CCTNAGC 1 cut(s) 570
BpuEI CTTGAG 2 cut(s) 806, 1550
BpuMI CCSGG 1 cut(s) 110
BsaJI CCNNGG 6 cut(s) 515, 552, 800, 947, 1247, 1343
Bsc4I CCNNNNNNNGG 4 cut(s) 575, 631, 698, 1396
Bse1I ACTGG 2 cut(s) 6, 1336
Bse3DI GCAATG 1 cut(s) 1031
BseBI CCWGG 3 cut(s) 1086, 1248, 1497
BseDI CCNNGG 6 cut(s) 515, 552, 800, 947, 1247, 1343
BseGI GGATG 7 cut(s) 525, 643, 976, 991, 1190, 1465, 1549
BseLI CCNNNNNNNGG 4 cut(s) 575, 631, 698, 1396
BseMI GCAATG 1 cut(s) 1031
BseMII CTCAG 2 cut(s) 1014, 1086
BseNI ACTGG 2 cut(s) 6, 1336
BseRI GAGGAG 2 cut(s) 365, 1483
BseXI GCAGC 5 cut(s) 100, 964, 1088, 1103, 1252
BseYI CCCAGC 1 cut(s) 1070
BsgI GTGCAG 2 cut(s) 380, 1110
Bsh1236I CGCG 1 cut(s) 202
BshFI GGCC 3 cut(s) 5, 551, 1084
BshNI GGYRCC 1 cut(s) 588
BsiHKAI GWGCWC 1 cut(s) 774
BsiSI CCGG 2 cut(s) 110, 171
BslFI GGGAC 2 cut(s) 674, 1265
BslI CCNNNNNNNGG 4 cut(s) 575, 631, 698, 1396
BsmFI GGGAC 2 cut(s) 674, 1265
BsmI GAATGC 1 cut(s) 969
BsnI GGCC 3 cut(s) 5, 551, 1084
Bsp1286I GDGCHC 1 cut(s) 774
Bsp143I GATC 8 cut(s) 214, 401, 460, 823, 1032, 1116, 1315, 1360
Bsp19I CCATGG 4 cut(s) 515, 800, 947, 1343
Bsp68I TCGCGA 1 cut(s) 202
BspANI GGCC 3 cut(s) 5, 551, 1084
BspCNI CTCAG 2 cut(s) 1013, 1087
BspFNI CGCG 1 cut(s) 202
BspHI TCATGA 1 cut(s) 1363
BspLI GGNNCC 3 cut(s) 513, 590, 615
BspPI GGATC 2 cut(s) 1310, 1368
BspT107I GGYRCC 1 cut(s) 588
BsrDI GCAATG 1 cut(s) 1031
BsrI ACTGG 2 cut(s) 6, 1336
BssECI CCNNGG 6 cut(s) 515, 552, 800, 947, 1247, 1343
BssMI GATC 8 cut(s) 214, 401, 460, 823, 1032, 1116, 1315, 1360
BssT1I CCWWGG 5 cut(s) 515, 552, 800, 947, 1343
Bst2UI CCWGG 3 cut(s) 1086, 1248, 1497
Bst4CI ACNGT 4 cut(s) 74, 681, 875, 894
Bst6I CTCTTC 2 cut(s) 342, 1389
BstC8I GCNNGC 2 cut(s) 426, 1238
BstDEI CTNAG 6 cut(s) 570, 716, 807, 1000, 1095, 1446
BstDSI CCRYGG 4 cut(s) 515, 800, 947, 1343
BstF5I GGATG 7 cut(s) 525, 643, 976, 991, 1190, 1465, 1549
BstFNI CGCG 1 cut(s) 202
BstKTI GATC 8 cut(s) 217, 404, 463, 826, 1035, 1119, 1318, 1363
BstMBI GATC 8 cut(s) 214, 401, 460, 823, 1032, 1116, 1315, 1360
BstMWI GCNNNNNNNGC 3 cut(s) 394, 949, 1076
BstNI CCWGG 3 cut(s) 1086, 1248, 1497
BstSCI CCNGG 4 cut(s) 108, 1084, 1246, 1495
BstUI CGCG 1 cut(s) 202
BstV1I GCAGC 5 cut(s) 100, 964, 1088, 1103, 1252
BstV2I GAAGAC 1 cut(s) 141
BsuI GTATCC 1 cut(s) 1350
BsuRI GGCC 3 cut(s) 5, 551, 1084
BtgI CCRYGG 4 cut(s) 515, 800, 947, 1343
BtsCI GGATG 7 cut(s) 525, 643, 976, 991, 1190, 1465, 1549
BtuMI TCGCGA 1 cut(s) 202
Cac8I GCNNGC 2 cut(s) 426, 1238
CciI TCATGA 1 cut(s) 1363
Cfr13I GGNCC 1 cut(s) 1107
CsiI ACCWGGT 1 cut(s) 1495
Csp6I GTAC 2 cut(s) 535, 589
CviQI GTAC 2 cut(s) 535, 589
DdeI CTNAG 6 cut(s) 570, 716, 807, 1000, 1095, 1446
DpnI GATC 8 cut(s) 216, 403, 462, 825, 1034, 1118, 1317, 1362
DpnII GATC 8 cut(s) 214, 401, 460, 823, 1032, 1116, 1315, 1360
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 2 cut(s) 342, 1389
EarI CTCTTC 2 cut(s) 342, 1389
Ecl136II GAGCTC 1 cut(s) 772
Eco130I CCWWGG 5 cut(s) 515, 552, 800, 947, 1343
Eco147I AGGCCT 2 cut(s) 551, 1084
Eco24I GRGCYC 1 cut(s) 774
Eco32I GATATC 2 cut(s) 411, 1012
Eco47I GGWCC 1 cut(s) 1107
Eco53kI GAGCTC 1 cut(s) 772
EcoICRI GAGCTC 1 cut(s) 772
EcoRI GAATTC 2 cut(s) 811, 1229
EcoRII CCWGG 3 cut(s) 1084, 1246, 1495
EcoRV GATATC 2 cut(s) 411, 1012
EcoT14I CCWWGG 5 cut(s) 515, 552, 800, 947, 1343
EcoT22I ATGCAT 1 cut(s) 1549
EcoT38I GRGCYC 1 cut(s) 774
ErhI CCWWGG 5 cut(s) 515, 552, 800, 947, 1343
FalI AAGNNNNNCTT 2 cut(s) 372, 404
FaqI GGGAC 2 cut(s) 674, 1265
FbaI TGATCA 1 cut(s) 1116
FblI GTMKAC 1 cut(s) 1386
Fnu4HI GCNGC 5 cut(s) 114, 953, 1077, 1092, 1241
FokI GGATG 7 cut(s) 532, 630, 963, 978, 1197, 1472, 1556
FriOI GRGCYC 1 cut(s) 774
Fsp4HI GCNGC 5 cut(s) 114, 953, 1077, 1092, 1241
FspBI CTAG 2 cut(s) 888, 1263
GluI GCNGC 5 cut(s) 114, 953, 1077, 1092, 1241
GsaI CCCAGC 1 cut(s) 1074
GsuI CTGGAG 1 cut(s) 1230
HaeIII GGCC 3 cut(s) 5, 551, 1084
HapII CCGG 2 cut(s) 110, 171
HindIII AAGCTT 3 cut(s) 572, 926, 1526
HinfI GANTC 6 cut(s) 105, 1199, 1223, 1280, 1514, 1595
HpaII CCGG 2 cut(s) 110, 171
HphI GGTGA 3 cut(s) 31, 1411, 1426
Hpy166II GTNNAC 3 cut(s) 184, 1323, 1387
Hpy188I TCNGA 4 cut(s) 415, 1003, 1228, 1572
Hpy188III TCNNGA 4 cut(s) 201, 1166, 1364, 1541
Hpy8I GTNNAC 3 cut(s) 184, 1323, 1387
Hpy99I CGWCG 1 cut(s) 202
HpyAV CCTTC 5 cut(s) 364, 838, 1405, 1444, 1450
HpyCH4III ACNGT 4 cut(s) 74, 681, 875, 894
HpyF10VI GCNNNNNNNGC 3 cut(s) 394, 949, 1076
HpyF3I CTNAG 6 cut(s) 570, 716, 807, 1000, 1095, 1446
KpnI GGTACC 1 cut(s) 592
Ksp22I TGATCA 1 cut(s) 1116
Kzo9I GATC 8 cut(s) 214, 401, 460, 823, 1032, 1116, 1315, 1360
LmnI GCTCC 3 cut(s) 290, 613, 769
Lsp1109I GCAGC 5 cut(s) 100, 964, 1088, 1103, 1252
LweI GCATC 4 cut(s) 652, 745, 1357, 1534
MabI ACCWGGT 1 cut(s) 1495
MaeI CTAG 2 cut(s) 888, 1263
MaeIII GTNAC 2 cut(s) 1187, 1582
MalI GATC 8 cut(s) 216, 403, 462, 825, 1034, 1118, 1317, 1362
MboI GATC 8 cut(s) 214, 401, 460, 823, 1032, 1116, 1315, 1360
MboII GAAGA 6 cut(s) 141, 359, 392, 1042, 1406, 1450
MhlI GDGCHC 1 cut(s) 774
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 8 cut(s) 250, 264, 564, 811, 1129, 1229, 1287, 1487
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 2 cut(s) 1208, 1232
MmeI TCCRAC 2 cut(s) 876, 1004
Mox20I TGGCCA 1 cut(s) 5
Mph1103I ATGCAT 1 cut(s) 1549
MroXI GAANNNNTTC 2 cut(s) 387, 564
MscI TGGCCA 1 cut(s) 5
MseI TTAA 2 cut(s) 477, 729
MslI CAYNNNNRTG 7 cut(s) 189, 191, 506, 1002, 1024, 1304, 1559
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 1094
MspI CCGG 2 cut(s) 110, 171
MspR9I CCNGG 4 cut(s) 110, 1086, 1248, 1497
Mva1269I GAATGC 1 cut(s) 969
MvaI CCWGG 3 cut(s) 1086, 1248, 1497
MvnI CGCG 1 cut(s) 202
MwoI GCNNNNNNNGC 3 cut(s) 394, 949, 1076
NciI CCSGG 1 cut(s) 110
NcoI CCATGG 4 cut(s) 515, 800, 947, 1343
NdeII GATC 8 cut(s) 214, 401, 460, 823, 1032, 1116, 1315, 1360
NlaIV GGNNCC 3 cut(s) 513, 590, 615
NmuCI GTSAC 2 cut(s) 1187, 1582
NruI TCGCGA 1 cut(s) 202
NsiI ATGCAT 1 cut(s) 1549
OliI CACNNNNGTG 1 cut(s) 189
PagI TCATGA 1 cut(s) 1363
PceI AGGCCT 2 cut(s) 551, 1084
PctI GAATGC 1 cut(s) 969
PdmI GAANNNNTTC 2 cut(s) 387, 564
PfeI GAWTC 4 cut(s) 105, 1280, 1514, 1595
PflMI CCANNNNNTGG 1 cut(s) 698
PkrI GCNGC 5 cut(s) 115, 954, 1078, 1093, 1242
PleI GAGTC 2 cut(s) 1207, 1231
PpsI GAGTC 2 cut(s) 1207, 1231
PsiI TTATAA 1 cut(s) 1559
Psp124BI GAGCTC 1 cut(s) 774
Psp6I CCWGG 3 cut(s) 1084, 1246, 1495
PspFI CCCAGC 1 cut(s) 1070
PspGI CCWGG 3 cut(s) 1084, 1246, 1495
PspN4I GGNNCC 3 cut(s) 513, 590, 615
PspPI GGNCC 1 cut(s) 1107
PvuII CAGCTG 1 cut(s) 1094
RruI TCGCGA 1 cut(s) 202
RsaI GTAC 2 cut(s) 536, 590
RsaNI GTAC 2 cut(s) 535, 589
RseI CAYNNNNRTG 7 cut(s) 189, 191, 506, 1002, 1024, 1304, 1559
SacI GAGCTC 1 cut(s) 774
SaqAI TTAA 2 cut(s) 477, 729
SatI GCNGC 5 cut(s) 114, 953, 1077, 1092, 1241
Sau3AI GATC 8 cut(s) 214, 401, 460, 823, 1032, 1116, 1315, 1360
Sau96I GGNCC 1 cut(s) 1107
ScaI AGTACT 1 cut(s) 536
SchI GAGTC 2 cut(s) 1208, 1232
ScrFI CCNGG 4 cut(s) 110, 1086, 1248, 1497
SduI GDGCHC 1 cut(s) 774
SexAI ACCWGGT 1 cut(s) 1495
SfaNI GCATC 4 cut(s) 652, 745, 1357, 1534
SinI GGWCC 1 cut(s) 1107
SmiMI CAYNNNNRTG 7 cut(s) 189, 191, 506, 1002, 1024, 1304, 1559
SmlI CTYRAG 2 cut(s) 785, 1529
SmoI CTYRAG 2 cut(s) 785, 1529
Sse9I AATT 8 cut(s) 250, 264, 564, 811, 1129, 1229, 1287, 1487
SseBI AGGCCT 2 cut(s) 551, 1084
SspI AATATT 1 cut(s) 621
SspMI CTAG 2 cut(s) 888, 1263
SstI GAGCTC 1 cut(s) 774
StuI AGGCCT 2 cut(s) 551, 1084
StyD4I CCNGG 4 cut(s) 108, 1084, 1246, 1495
StyI CCWWGG 5 cut(s) 515, 552, 800, 947, 1343
TaaI ACNGT 4 cut(s) 74, 681, 875, 894
TaqI TCGA 6 cut(s) 103, 378, 391, 1048, 1209, 1314
TasI AATT 8 cut(s) 250, 264, 564, 811, 1129, 1229, 1287, 1487
TatI WGTACW 1 cut(s) 534
TfiI GAWTC 4 cut(s) 105, 1280, 1514, 1595
Tru1I TTAA 2 cut(s) 477, 729
Tru9I TTAA 2 cut(s) 477, 729
TseFI GTSAC 2 cut(s) 1187, 1582
TseI GCWGC 5 cut(s) 113, 952, 1076, 1091, 1240
Tsp45I GTSAC 2 cut(s) 1187, 1582
TspGWI ACGGA 1 cut(s) 1308
Van91I CCANNNNNTGG 1 cut(s) 698
VpaK11BI GGWCC 1 cut(s) 1107
XapI RAATTY 2 cut(s) 811, 1229
XmiI GTMKAC 1 cut(s) 1386
XmnI GAANNNNTTC 2 cut(s) 387, 564
XspI CTAG 2 cut(s) 888, 1263
ZrmI AGTACT 1 cut(s) 536
Zsp2I ATGCAT 1 cut(s) 1549
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.