Rh7CG178300

Xyloglucan galactosyltransferase KATAMARI1

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Reverse (-)
15221630 .. 15223582
1953 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG178300.1

Sequence Viewer

Length: 1725 bp
ATGGCAGTTCCCTTGTCGAAAAGAAATTCCAAACACTTGAAGAAAGAAGGCCCGAACAGGGAGCCTTGTTTCTGTTTCATTGCTCTATTCAAGTTTCTATATAGACTCCCTGCAGCATTTTTCTTGCTTTTTCTTATCTACCTCTGGTCTTCCTCCACCACCATTATTTCCGGCAACATTGTTCATGTCTGTGTCTCGTCGCGGAAGCTCAACAATCATTACTGCCTATCTGCTGGTAGTACCAGACCCAATTTTGAACTCCCAAATCTCAGTAATGCTACACTTTACCTCCACATTCCTGACCCGAGTTCAAACCTCTCTATCTCGATATCACCTCCTTTGTCCCAAAAAAACAGTCCCATTAGTCCTCCACCTCCTAAAGTCAGTAGTGAGATTGTGATCAGAGAGACTGTTCAAGTTGTCCATGATGAGTCTGATCCAGCGAAGAATGGAGCCAACAAAGAACGAGAAGAAGAGATTGCAAATGCAAAGAAGGAAGTCGAAGAGCAGCTAAGATTGCACAGATCATGGATATCAATTAAGAAGCATGAAGGGTGTGAAGGAAGAGGAGTCTACGTGTATGACTTGCCATCCAAGTTTAACAAGGACTTGTTGGGTCAATGCAGAGACATGGTTCCATGGATGGATTTCTGCAAGTACTTCGGGAATGAGGCGTTGGGTGAACCGATTCCCAAACTTGGAGAGGGGTGGTACCACACTCATCAGTACTCATTGGAGCCCATATTCCACCAAAGGATCTTGAAGCACCCTTGCAGGGTTTACAGTGAAAATGAAGCGAAGCTTTTCTATGTTCCATTTTATGGCGGTTTGGACATTCTGAGATGGCATTTCAAGAATGTGTCCAATGATGTCAAGGACACTTTGAGCTTGGAGCTCATAACATGGCTTGAGAAGCAAGACTCTTGGACTAAGAATTCAGGTAGAGATCATTTTCTGGTGTTGGGGAAGATCTCATGGGATTTTAGGCGAAAAGATGGTTCGTGGGGGACTAGATTGCTTGAAATTGATCAAATGCAAAATCCAATCAAGCTCTTGATCGAGAGACAACCATGGCAACCAAATGACATTGGAATCCCACATCCAACATTCTTCCATCCGAATTCAGACGAAGACATCATGGCATTGCAATGGAAGATCATTAGCTCATATAGAAAAAAGCTAGTGAGCTTCGCTGGTGCAGCAAGGCCTGGTGCAGCTGAAAGCATAAGGTCCATACTGATCAACCAGTGCAACACAGCCGAAAATGGGAAATGTCACTTTCTCAACTGTGGTTCAGGTGGTTGTGATCAGCCAGAAATGGTCACTGAGCTTTTCATGGAGTCTGAATTCTGCTTGCAGCCTCCAGGAGATAGCCCAACTCGAAAGTCCTTATTCGATTCCTTAATTTCAGGTTGTATTCCTGTGATTTTCGATCCTTTCACAGCTTACTATCAGTATCCATGGCATCTCCCAGAGGAACATGGAAAGTATTCTGTGTTTGTAGACCAAGAAGATGTGAGGGGAATGAAGGTGAACGTGGTGGAAATGCTTATGAAGATTTCTAAGGAAAAGAGGGATGATATGAGGAGGCACATTGTGTATGAGTTGTTGCCTGGTTTGGTTTATGGGGATTCAAATGCCAAGTTTGACAAGTTTCAGGATGCATTTTCGATTACAATGAGAAATCTGATGGAGAGGGTCACCAAATTGGATTTAGCTGTATAA

Protein Analysis

574

Amino Acids

65.94

Weight (kDa)

7.27

Isoelectric Point (pI)

44.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Exostosin_GT47 PF03016 186 - 508 5.5e-81 Exostosin GT47 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012934)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 711
AccB1I GGYRCC 1 cut(s) 711
AccB7I CCANNNNNTGG 1 cut(s) 821
AccI GTMKAC 2 cut(s) 573, 1503
AccII CGCG 1 cut(s) 202
AciI CCGC 2 cut(s) 202, 825
AclWI GGATC 3 cut(s) 431, 764, 1427
AcsI RAATTY 4 cut(s) 25, 934, 1120, 1346
AdeI CACNNNGTG 1 cut(s) 1597
AfaI GTAC 4 cut(s) 241, 659, 713, 728
AfiI CCNNNNNNNGG 5 cut(s) 58, 698, 775, 821, 1266
AflIII ACRYGT 1 cut(s) 576
AgsI TTSAA 9 cut(s) 40, 91, 257, 312, 416, 763, 853, 1022, 1635
AjnI CCWGG 3 cut(s) 1207, 1363, 1612
AjuI GAANNNNNNNTTGG 2 cut(s) 659, 691
Alw21I GWGCWC 1 cut(s) 897
Alw26I GTCTC 4 cut(s) 199, 401, 621, 1057
AlwI GGATC 3 cut(s) 431, 764, 1427
Ama87I CYCGRG 1 cut(s) 304
AoxI GGCC 2 cut(s) 49, 1205
ApeKI GCWGC 5 cut(s) 113, 508, 1199, 1214, 1357
ApoI RAATTY 4 cut(s) 25, 934, 1120, 1346
ArsI GACNNNNNNTTYG 2 cut(s) 340, 372
Asp700I GAANNNNTTC 3 cut(s) 687, 803, 1489
Asp718I GGTACC 1 cut(s) 711
AspS9I GGNCC 2 cut(s) 50, 1230
AsuHPI GGTGA 4 cut(s) 324, 692, 1543, 1693
AvaI CYCGRG 1 cut(s) 304
AvaII GGWCC 1 cut(s) 1230
BanI GGYRCC 1 cut(s) 711
BanII GRGCYC 2 cut(s) 741, 897
BbsI GAAGAC 2 cut(s) 141, 1137
Bbv12I GWGCWC 1 cut(s) 897
BbvI GCAGC 5 cut(s) 125, 520, 1211, 1226, 1369
BccI CCATC 6 cut(s) 598, 637, 837, 989, 1122, 1684
BcgI CGANNNNNNTGC 2 cut(s) 643, 677
BciT130I CCWGG 3 cut(s) 1209, 1365, 1614
BciVI GTATCC 1 cut(s) 1467
BclI TGATCA 4 cut(s) 399, 1027, 1239, 1306
BcoDI GTCTC 4 cut(s) 199, 401, 621, 1057
BfaI CTAG 2 cut(s) 1011, 1181
BfmI CTRYAG 1 cut(s) 111
BfuI GTATCC 1 cut(s) 1467
BglII AGATCT 1 cut(s) 969
BisI GCNGC 5 cut(s) 114, 509, 1200, 1215, 1358
BlsI GCNGC 5 cut(s) 115, 510, 1201, 1216, 1359
BmcAI AGTACT 2 cut(s) 659, 728
Bme1390I CCNGG 3 cut(s) 1209, 1365, 1614
Bme18I GGWCC 1 cut(s) 1230
BmeT110I CYCGRG 1 cut(s) 304
BmgT120I GGNCC 2 cut(s) 50, 1230
BmiI GGNNCC 5 cut(s) 63, 454, 636, 713, 738
BmrFI CCNGG 3 cut(s) 1209, 1365, 1614
BmsI GCATC 2 cut(s) 1474, 1651
BpiI GAAGAC 2 cut(s) 141, 1137
BpmI CTGGAG 1 cut(s) 1347
BpuEI CTTGAG 1 cut(s) 929
BsaAI YACGTR 1 cut(s) 577
BsaBI GATNNNNATC 1 cut(s) 398
BsaJI CCNNGG 3 cut(s) 638, 1070, 1460
BsaXI ACNNNNNCTCC 4 cut(s) 273, 303, 561, 591
Bsc4I CCNNNNNNNGG 5 cut(s) 58, 698, 775, 821, 1266
Bse1I ACTGG 1 cut(s) 1246
Bse3DI GCAATG 3 cut(s) 78, 1142, 1154
Bse8I GATNNNNATC 1 cut(s) 398
BseBI CCWGG 3 cut(s) 1209, 1365, 1614
BseDI CCNNGG 3 cut(s) 638, 1070, 1460
BseGI GGATG 6 cut(s) 590, 648, 1099, 1114, 1582, 1666
BseJI GATNNNNATC 1 cut(s) 398
BseLI CCNNNNNNNGG 5 cut(s) 58, 698, 775, 821, 1266
BseMI GCAATG 3 cut(s) 78, 1142, 1154
BseMII CTCAG 3 cut(s) 283, 830, 1317
BseNI ACTGG 1 cut(s) 1246
BseRI GAGGAG 2 cut(s) 582, 1600
BseXI GCAGC 5 cut(s) 125, 520, 1211, 1226, 1369
BsgI GTGCAG 2 cut(s) 1218, 1233
Bsh1236I CGCG 1 cut(s) 202
BshFI GGCC 2 cut(s) 51, 1207
BshNI GGYRCC 1 cut(s) 711
BsiHKAI GWGCWC 1 cut(s) 897
BsiHKCI CYCGRG 1 cut(s) 304
BsiSI CCGG 1 cut(s) 171
BslFI GGGAC 3 cut(s) 328, 342, 1021
BslI CCNNNNNNNGG 5 cut(s) 58, 698, 775, 821, 1266
BsmAI GTCTC 4 cut(s) 199, 401, 621, 1057
BsmFI GGGAC 3 cut(s) 328, 342, 1021
BsnI GGCC 2 cut(s) 51, 1207
BsoBI CYCGRG 1 cut(s) 304
Bsp1286I GDGCHC 2 cut(s) 741, 897
Bsp19I CCATGG 3 cut(s) 638, 1070, 1460
BspACI CCGC 2 cut(s) 202, 825
BspANI GGCC 2 cut(s) 51, 1207
BspCNI CTCAG 3 cut(s) 282, 831, 1318
BspFNI CGCG 1 cut(s) 202
BspLI GGNNCC 5 cut(s) 63, 454, 636, 713, 738
BspMAI CTGCAG 1 cut(s) 115
BspPI GGATC 3 cut(s) 431, 764, 1427
BspQI GCTCTTC 1 cut(s) 498
BspT107I GGYRCC 1 cut(s) 711
BsrDI GCAATG 3 cut(s) 78, 1142, 1154
BsrI ACTGG 1 cut(s) 1246
BssECI CCNNGG 3 cut(s) 638, 1070, 1460
BssT1I CCWWGG 3 cut(s) 638, 1070, 1460
Bst2UI CCWGG 3 cut(s) 1209, 1365, 1614
Bst4CI ACNGT 4 cut(s) 356, 412, 785, 1289
Bst6I CTCTTC 3 cut(s) 468, 498, 559
BstBAI YACGTR 1 cut(s) 577
BstC8I GCNNGC 1 cut(s) 1355
BstDEI CTNAG 6 cut(s) 269, 512, 839, 930, 1326, 1563
BstDSI CCRYGG 3 cut(s) 638, 1070, 1460
BstEII GGTNACC 1 cut(s) 1699
BstF5I GGATG 6 cut(s) 590, 648, 1099, 1114, 1582, 1666
BstFNI CGCG 1 cut(s) 202
BstMAI GTCTC 4 cut(s) 199, 401, 621, 1057
BstMWI GCNNNNNNNGC 3 cut(s) 517, 913, 1199
BstNI CCWGG 3 cut(s) 1209, 1365, 1614
BstPI GGTNACC 1 cut(s) 1699
BstSCI CCNGG 3 cut(s) 1207, 1363, 1612
BstSFI CTRYAG 1 cut(s) 111
BstUI CGCG 1 cut(s) 202
BstV1I GCAGC 5 cut(s) 125, 520, 1211, 1226, 1369
BstV2I GAAGAC 2 cut(s) 141, 1137
BstX2I RGATCY 2 cut(s) 756, 969
BstYI RGATCY 2 cut(s) 756, 969
BsuI GTATCC 1 cut(s) 1467
BsuRI GGCC 2 cut(s) 51, 1207
BtgI CCRYGG 3 cut(s) 638, 1070, 1460
BtsCI GGATG 6 cut(s) 590, 648, 1099, 1114, 1582, 1666
BtsIMutI CAGTG 3 cut(s) 790, 1253, 1323
Cac8I GCNNGC 1 cut(s) 1355
Cfr13I GGNCC 2 cut(s) 50, 1230
Csp6I GTAC 4 cut(s) 240, 658, 712, 727
CviQI GTAC 4 cut(s) 240, 658, 712, 727
DdeI CTNAG 6 cut(s) 269, 512, 839, 930, 1326, 1563
DraIII CACNNNGTG 1 cut(s) 1597
Eam1104I CTCTTC 3 cut(s) 468, 498, 559
EarI CTCTTC 3 cut(s) 468, 498, 559
Ecl136II GAGCTC 1 cut(s) 895
Eco130I CCWWGG 3 cut(s) 638, 1070, 1460
Eco147I AGGCCT 1 cut(s) 1207
Eco24I GRGCYC 2 cut(s) 741, 897
Eco32I GATATC 2 cut(s) 330, 534
Eco47I GGWCC 1 cut(s) 1230
Eco53kI GAGCTC 1 cut(s) 895
Eco88I CYCGRG 1 cut(s) 304
Eco91I GGTNACC 1 cut(s) 1699
EcoICRI GAGCTC 1 cut(s) 895
EcoO65I GGTNACC 1 cut(s) 1699
EcoRI GAATTC 3 cut(s) 934, 1120, 1346
EcoRII CCWGG 3 cut(s) 1207, 1363, 1612
EcoRV GATATC 2 cut(s) 330, 534
EcoT14I CCWWGG 3 cut(s) 638, 1070, 1460
EcoT22I ATGCAT 1 cut(s) 1666
EcoT38I GRGCYC 2 cut(s) 741, 897
ErhI CCWWGG 3 cut(s) 638, 1070, 1460
FalI AAGNNNNNCTT 2 cut(s) 786, 818
FaqI GGGAC 3 cut(s) 328, 342, 1021
FbaI TGATCA 4 cut(s) 399, 1027, 1239, 1306
FblI GTMKAC 2 cut(s) 573, 1503
Fnu4HI GCNGC 5 cut(s) 114, 509, 1200, 1215, 1358
FokI GGATG 6 cut(s) 577, 655, 1086, 1101, 1589, 1673
FriOI GRGCYC 2 cut(s) 741, 897
Fsp4HI GCNGC 5 cut(s) 114, 509, 1200, 1215, 1358
FspBI CTAG 2 cut(s) 1011, 1181
GluI GCNGC 5 cut(s) 114, 509, 1200, 1215, 1358
GsuI CTGGAG 1 cut(s) 1347
HaeIII GGCC 2 cut(s) 51, 1207
HapII CCGG 1 cut(s) 171
HindIII AAGCTT 1 cut(s) 800
HinfI GANTC 9 cut(s) 105, 431, 570, 688, 920, 1092, 1340, 1397, 1631
HpaII CCGG 1 cut(s) 171
HphI GGTGA 4 cut(s) 324, 692, 1543, 1693
Hpy166II GTNNAC 5 cut(s) 574, 683, 781, 1504, 1534
Hpy188I TCNGA 7 cut(s) 404, 436, 840, 1119, 1126, 1345, 1689
Hpy188III TCNNGA 8 cut(s) 299, 325, 664, 760, 853, 1054, 1060, 1658
Hpy8I GTNNAC 5 cut(s) 574, 683, 781, 1504, 1534
Hpy99I CGWCG 1 cut(s) 202
HpyAV CCTTC 5 cut(s) 41, 487, 545, 554, 1522
HpyCH4III ACNGT 4 cut(s) 356, 412, 785, 1289
HpyCH4IV ACGT 2 cut(s) 576, 1536
HpyF10VI GCNNNNNNNGC 3 cut(s) 517, 913, 1199
HpyF3I CTNAG 6 cut(s) 269, 512, 839, 930, 1326, 1563
HpySE526I ACGT 2 cut(s) 576, 1536
KpnI GGTACC 1 cut(s) 715
Ksp22I TGATCA 4 cut(s) 399, 1027, 1239, 1306
LguI GCTCTTC 1 cut(s) 498
LmnI GCTCC 4 cut(s) 61, 452, 736, 892
Lsp1109I GCAGC 5 cut(s) 125, 520, 1211, 1226, 1369
LweI GCATC 2 cut(s) 1474, 1651
MaeI CTAG 2 cut(s) 1011, 1181
MaeII ACGT 2 cut(s) 576, 1536
MaeIII GTNAC 3 cut(s) 1274, 1321, 1699
MflI RGATCY 2 cut(s) 756, 969
MhlI GDGCHC 2 cut(s) 741, 897
MluCI AATT 9 cut(s) 25, 250, 537, 934, 1023, 1120, 1346, 1404, 1706
MlyI GAGTC 5 cut(s) 99, 440, 579, 914, 1349
MmeI TCCRAC 1 cut(s) 1127
Mph1103I ATGCAT 1 cut(s) 1666
MroXI GAANNNNTTC 3 cut(s) 687, 803, 1489
MseI TTAA 3 cut(s) 540, 600, 1403
MslI CAYNNNNRTG 2 cut(s) 189, 1147
MspA1I CMGCKG 1 cut(s) 1217
MspI CCGG 1 cut(s) 171
MspR9I CCNGG 3 cut(s) 1209, 1365, 1614
MvaI CCWGG 3 cut(s) 1209, 1365, 1614
MvnI CGCG 1 cut(s) 202
MwoI GCNNNNNNNGC 3 cut(s) 517, 913, 1199
NcoI CCATGG 3 cut(s) 638, 1070, 1460
NlaIV GGNNCC 5 cut(s) 63, 454, 636, 713, 738
NmuCI GTSAC 3 cut(s) 1274, 1321, 1699
NsiI ATGCAT 1 cut(s) 1666
PceI AGGCCT 1 cut(s) 1207
PciSI GCTCTTC 1 cut(s) 498
PdmI GAANNNNTTC 3 cut(s) 687, 803, 1489
PfeI GAWTC 4 cut(s) 688, 1092, 1397, 1631
PflMI CCANNNNNTGG 1 cut(s) 821
PfoI TCCNGGA 1 cut(s) 1363
PkrI GCNGC 5 cut(s) 115, 510, 1201, 1216, 1359
PleI GAGTC 5 cut(s) 99, 439, 578, 914, 1348
PpsI GAGTC 5 cut(s) 99, 439, 578, 914, 1348
Ppu21I YACGTR 1 cut(s) 577
Psp124BI GAGCTC 1 cut(s) 897
Psp6I CCWGG 3 cut(s) 1207, 1363, 1612
PspEI GGTNACC 1 cut(s) 1699
PspGI CCWGG 3 cut(s) 1207, 1363, 1612
PspN4I GGNNCC 5 cut(s) 63, 454, 636, 713, 738
PspPI GGNCC 2 cut(s) 50, 1230
PstI CTGCAG 1 cut(s) 115
PsuI RGATCY 2 cut(s) 756, 969
PvuII CAGCTG 1 cut(s) 1217
RsaI GTAC 4 cut(s) 241, 659, 713, 728
RsaNI GTAC 4 cut(s) 240, 658, 712, 727
RseI CAYNNNNRTG 2 cut(s) 189, 1147
SacI GAGCTC 1 cut(s) 897
SapI GCTCTTC 1 cut(s) 498
SaqAI TTAA 3 cut(s) 540, 600, 1403
SatI GCNGC 5 cut(s) 114, 509, 1200, 1215, 1358
Sau96I GGNCC 2 cut(s) 50, 1230
ScaI AGTACT 2 cut(s) 659, 728
SchI GAGTC 5 cut(s) 99, 440, 579, 914, 1349
ScrFI CCNGG 3 cut(s) 1209, 1365, 1614
SduI GDGCHC 2 cut(s) 741, 897
SfaNI GCATC 2 cut(s) 1474, 1651
SfcI CTRYAG 1 cut(s) 111
SinI GGWCC 1 cut(s) 1230
SmiMI CAYNNNNRTG 2 cut(s) 189, 1147
SmlI CTYRAG 1 cut(s) 908
SmoI CTYRAG 1 cut(s) 908
Sse9I AATT 9 cut(s) 25, 250, 537, 934, 1023, 1120, 1346, 1404, 1706
SseBI AGGCCT 1 cut(s) 1207
SsiI CCGC 2 cut(s) 202, 825
SspMI CTAG 2 cut(s) 1011, 1181
SstI GAGCTC 1 cut(s) 897
StuI AGGCCT 1 cut(s) 1207
StyD4I CCNGG 3 cut(s) 1207, 1363, 1612
StyI CCWWGG 3 cut(s) 638, 1070, 1460
TaaI ACNGT 4 cut(s) 356, 412, 785, 1289
TaiI ACGT 2 cut(s) 579, 1539
TaqI TCGA 8 cut(s) 17, 326, 501, 1059, 1381, 1395, 1431, 1670
TasI AATT 9 cut(s) 25, 250, 537, 934, 1023, 1120, 1346, 1404, 1706
TatI WGTACW 2 cut(s) 657, 726
TfiI GAWTC 4 cut(s) 688, 1092, 1397, 1631
Tru1I TTAA 3 cut(s) 540, 600, 1403
Tru9I TTAA 3 cut(s) 540, 600, 1403
TscAI CASTG 3 cut(s) 790, 1253, 1330
TseFI GTSAC 3 cut(s) 1274, 1321, 1699
TseI GCWGC 5 cut(s) 113, 508, 1199, 1214, 1357
Tsp45I GTSAC 3 cut(s) 1274, 1321, 1699
TspDTI ATGAA 7 cut(s) 67, 173, 564, 807, 1324, 1541, 1568
TspRI CASTG 3 cut(s) 790, 1253, 1330
Van91I CCANNNNNTGG 1 cut(s) 821
VpaK11BI GGWCC 1 cut(s) 1230
XapI RAATTY 4 cut(s) 25, 934, 1120, 1346
XmiI GTMKAC 2 cut(s) 573, 1503
XmnI GAANNNNTTC 3 cut(s) 687, 803, 1489
XspI CTAG 2 cut(s) 1011, 1181
ZrmI AGTACT 2 cut(s) 659, 728
Zsp2I ATGCAT 1 cut(s) 1666
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.