Prupe.5G126500_v2.0.a1

Methyltransferase-like protein 17

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Forward (+)
12382043 .. 12385826
3784 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G126500.1

Sequence Viewer

Length: 1518 bp
ATGGCGACCACCCTGCTCCCCGAGACTGCCCAAAAGGTCCTAACCCAAGAAACTCTCCGCTCCGCTGCCAAACAGTCCCAGCGCTGTCTCACAACCCCAGTCCGTCTCCGTCGAGCCATTAAAAAATACCTCAAAGAGCAGGAGGAGCCCCACATGAAGAGGAAGGTGCTGAGGCTATCGGAATCTTTCAGCCAAATTAAGGATGTGAATTCGCAGCTTGTTACAGCGACTTCACAACAGCTCGTTGAGGACCCTTTGCAGTCTGTGGACCAATCCCAGAGGTGGAAGATCAAGAGCTCTTATGGAGACATCGGCCTCACCTACAGAGACGACGAGACCATTGCTTATGTTGCTTCTAGAATGCCTGCTGTGTTTTCTGCTTGTCACAGAGTACTCAAGGAGGTTCGTAGAAGACTGCCTGAGTTTTCTCCTGCTAGAGTGTTGGATTTTGGTGCTGGCACGGGTTCAGCTTTCTGGGCACTACGTGAAGTCTGGCCACATTCCTTGGAGAAAGTTAATCTAGTGGAGCCATCACAATCAATGCAGCGTGCAGGGCAGAAGCTTATACAAGGTCAGAAGGACTTGCCACTTATTCATAGTTATGATAGCATCCAATCATTGACCAAAAGCATCAAAAAGTCAGACAGAGAGCATGACCTTGTAATTGCTTCCTATGTTCTTGGAGAGATACCGTCGCTCAAGGATCGAATTACTGTAGTACGCCAGCTCTGGGATCTGACACGGGATGTCCTGGTTTTAATTGAACCTGGAACACCACAAGGATCTAATATCATATCTCAGATGCGTTCACATATATTGTGGATGGAAAAAAGGAAATGCCGTAAATCTAAAGATGGAGCTGATGAAACTACCAAGGACTTGGTCACTCAAAAGAATGGTGCATTTATAGTTGCTCCGTGTTCTCATGATGGACAATGTCCGCTAGAGAAAGCTGAAAAGTATTGTCATTTTGTTCAGCGATTGGAGAGGACATCTATTCAGCGTACATTCAAGCGTTCCAAGGGTGGTCAGCCGTTACGTGGCTTTGAAGATGAGAAATTTAGCTTCATTGCTGTCAGACGAGGACAAAGACCACAGGAACCTTGGCCTCTTGATGGTCTGAAATTTGACACTTTGAAGGAGCAACAGGCTAAACGGAGCCCTGAAGATCTTGAAATTGACCTGGAGGAGCTAAATGCCTCGCAGCAAGCTGACCTCATTCCATTTGAAGAACCGGATCCAGTTAACTATGATTCTGATGTTATGGAATCTGATGTTGCTGATGAAAATGAAGAGGAGGAAGATGAAAGAGGTCATGCTGATCTTGGGGGTGGTTGGGGCAGGATTATCTATATGCCTGTACGAAGGGGCAAGCAGGTTACAATGGATGTTTGTCGATCAACCAAACGGGATGGTTCGGAAGGCCAGCTTCAGCGGGTGGTCGTGACAAAGAGTAAGAACCCTGCACTACATCAACAGGCCCGAAAGTCTATCTGGGGGGACTTATGGCCTTTCTGA

Protein Analysis

506

Amino Acids

57.69

Weight (kDa)

8.64

Isoelectric Point (pI)

63.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1366
AccBSI CCGCTC 1 cut(s) 60
AciI CCGC 4 cut(s) 58, 63, 941, 1435
AclWI GGATC 5 cut(s) 711, 741, 790, 1232, 1245
AcoI YGGCCR 1 cut(s) 494
AcsI RAATTY 3 cut(s) 208, 1058, 1124
AcuI CTGAAG 2 cut(s) 1185, 1415
AdeI CACNNNGTG 1 cut(s) 485
AfaI GTAC 4 cut(s) 393, 720, 1006, 1362
AfeI AGCGCT 1 cut(s) 83
AfiI CCNNNNNNNGG 5 cut(s) 199, 282, 730, 1040, 1115
AgsI TTSAA 6 cut(s) 764, 1012, 1049, 1138, 1175, 1229
AjnI CCWGG 3 cut(s) 750, 766, 1182
Alw21I GWGCWC 1 cut(s) 299
Alw26I GTCTC 6 cut(s) 17, 92, 110, 300, 321, 329
AlwI GGATC 5 cut(s) 711, 741, 790, 1232, 1245
Ama87I CYCGRG 1 cut(s) 20
Aor51HI AGCGCT 1 cut(s) 83
AoxI GGCC 6 cut(s) 313, 494, 1106, 1423, 1479, 1508
ApeKI GCWGC 4 cut(s) 65, 214, 544, 1204
ApoI RAATTY 3 cut(s) 208, 1058, 1124
AspLEI GCGC 1 cut(s) 84
AspS9I GGNCC 4 cut(s) 37, 250, 268, 1480
AsuHPI GGTGA 1 cut(s) 310
AvaI CYCGRG 1 cut(s) 20
AvaII GGWCC 3 cut(s) 37, 250, 268
BaeGI GKGCMC 1 cut(s) 481
BalI TGGCCA 1 cut(s) 496
BamHI GGATCC 1 cut(s) 1237
BanII GRGCYC 3 cut(s) 150, 299, 1163
BbsI GAAGAC 1 cut(s) 418
Bbv12I GWGCWC 1 cut(s) 299
BbvCI CCTCAGC 1 cut(s) 170
BbvI GCAGC 4 cut(s) 52, 226, 556, 1216
BccI CCATC 6 cut(s) 538, 817, 848, 923, 1109, 1406
BceAI ACGGC 2 cut(s) 825, 1018
BcgI CGANNNNNNTGC 3 cut(s) 29, 323, 357
BciT130I CCWGG 3 cut(s) 752, 768, 1184
BcoDI GTCTC 6 cut(s) 17, 92, 110, 300, 321, 329
BfaI CTAG 4 cut(s) 357, 435, 521, 944
BfmI CTRYAG 2 cut(s) 322, 714
BfoI RGCGCY 1 cut(s) 85
BfuAI ACCTGC 1 cut(s) 1366
BglII AGATCT 1 cut(s) 1168
BisI GCNGC 4 cut(s) 66, 215, 545, 1205
BlsI GCNGC 4 cut(s) 67, 216, 546, 1206
BmcAI AGTACT 1 cut(s) 393
Bme1390I CCNGG 3 cut(s) 752, 768, 1184
Bme18I GGWCC 3 cut(s) 37, 250, 268
BmeT110I CYCGRG 1 cut(s) 20
BmgT120I GGNCC 4 cut(s) 37, 250, 268, 1480
BmiI GGNNCC 6 cut(s) 147, 252, 528, 1101, 1160, 1239
BmrFI CCNGG 3 cut(s) 752, 768, 1184
BmrI ACTGGG 1 cut(s) 92
BmsI GCATC 3 cut(s) 618, 639, 792
BmuI ACTGGG 1 cut(s) 92
BpiI GAAGAC 1 cut(s) 418
BpmI CTGGAG 1 cut(s) 1205
Bpu10I CCTNAGC 1 cut(s) 170
BpuEI CTTGAG 2 cut(s) 380, 683
BsaAI YACGTR 2 cut(s) 485, 1040
BsaI GGTCTC 1 cut(s) 329
BsaJI CCNNGG 4 cut(s) 504, 873, 1020, 1103
BsaWI WCCGGW 1 cut(s) 1234
Bsc4I CCNNNNNNNGG 5 cut(s) 199, 282, 730, 1040, 1115
Bse1I ACTGG 2 cut(s) 98, 1241
Bse3DI GCAATG 2 cut(s) 339, 1068
BseBI CCWGG 3 cut(s) 752, 768, 1184
BseDI CCNNGG 4 cut(s) 504, 873, 1020, 1103
BseGI GGATG 6 cut(s) 208, 609, 751, 828, 1393, 1417
BseLI CCNNNNNNNGG 5 cut(s) 199, 282, 730, 1040, 1115
BseMI GCAATG 2 cut(s) 339, 1068
BseMII CTCAG 3 cut(s) 161, 411, 812
BseNI ACTGG 2 cut(s) 98, 1241
BseRI GAGGAG 3 cut(s) 158, 1202, 1310
BseSI GKGCMC 1 cut(s) 481
BseXI GCAGC 4 cut(s) 52, 226, 556, 1216
BseYI CCCAGC 1 cut(s) 78
BsgI GTGCAG 2 cut(s) 570, 1449
BshFI GGCC 6 cut(s) 315, 496, 1108, 1425, 1481, 1510
BsiHKAI GWGCWC 1 cut(s) 299
BsiHKCI CYCGRG 1 cut(s) 20
BsiSI CCGG 1 cut(s) 1235
BslFI GGGAC 2 cut(s) 61, 1514
BslI CCNNNNNNNGG 5 cut(s) 199, 282, 730, 1040, 1115
BsmAI GTCTC 6 cut(s) 17, 92, 110, 300, 321, 329
BsmBI CGTCTC 2 cut(s) 110, 321
BsmFI GGGAC 2 cut(s) 61, 1514
BsmI GAATGC 1 cut(s) 366
BsnI GGCC 6 cut(s) 315, 496, 1108, 1425, 1481, 1510
Bso31I GGTCTC 1 cut(s) 329
BsoBI CYCGRG 1 cut(s) 20
Bsp1286I GDGCHC 4 cut(s) 150, 299, 481, 1163
Bsp143I GATC 8 cut(s) 288, 703, 733, 782, 1168, 1237, 1321, 1397
BspACI CCGC 4 cut(s) 58, 63, 941, 1435
BspANI GGCC 6 cut(s) 315, 496, 1108, 1425, 1481, 1510
BspCNI CTCAG 3 cut(s) 162, 412, 811
BspHI TCATGA 1 cut(s) 925
BspLI GGNNCC 6 cut(s) 147, 252, 528, 1101, 1160, 1239
BspMI ACCTGC 1 cut(s) 1366
BspPI GGATC 5 cut(s) 711, 741, 790, 1232, 1245
BspTNI GGTCTC 1 cut(s) 329
BsrBI CCGCTC 1 cut(s) 60
BsrDI GCAATG 2 cut(s) 339, 1068
BsrI ACTGG 2 cut(s) 98, 1241
BssECI CCNNGG 4 cut(s) 504, 873, 1020, 1103
BssMI GATC 8 cut(s) 288, 703, 733, 782, 1168, 1237, 1321, 1397
BssT1I CCWWGG 4 cut(s) 504, 873, 1020, 1103
Bst2UI CCWGG 3 cut(s) 752, 768, 1184
Bst4CI ACNGT 3 cut(s) 75, 693, 715
Bst6I CTCTTC 2 cut(s) 152, 1287
BstBAI YACGTR 2 cut(s) 485, 1040
BstC8I GCNNGC 7 cut(s) 366, 457, 549, 725, 1209, 1373, 1427
BstDEI CTNAG 3 cut(s) 170, 420, 798
BstF5I GGATG 6 cut(s) 208, 609, 751, 828, 1393, 1417
BstH2I RGCGCY 1 cut(s) 85
BstHHI GCGC 1 cut(s) 84
BstKTI GATC 8 cut(s) 291, 706, 736, 785, 1171, 1240, 1324, 1400
BstMAI GTCTC 6 cut(s) 17, 92, 110, 300, 321, 329
BstMBI GATC 8 cut(s) 288, 703, 733, 782, 1168, 1237, 1321, 1397
BstMWI GCNNNNNNNGC 4 cut(s) 145, 350, 476, 553
BstNI CCWGG 3 cut(s) 752, 768, 1184
BstSCI CCNGG 3 cut(s) 750, 766, 1182
BstSFI CTRYAG 2 cut(s) 322, 714
BstSLI GKGCMC 1 cut(s) 481
BstV1I GCAGC 4 cut(s) 52, 226, 556, 1216
BstV2I GAAGAC 1 cut(s) 418
BstX2I RGATCY 4 cut(s) 733, 782, 1168, 1237
BstXI CCANNNNNNTGG 1 cut(s) 880
BstYI RGATCY 4 cut(s) 733, 782, 1168, 1237
BsuRI GGCC 6 cut(s) 315, 496, 1108, 1425, 1481, 1510
BtsCI GGATG 6 cut(s) 208, 609, 751, 828, 1393, 1417
BveI ACCTGC 1 cut(s) 1366
Cac8I GCNNGC 7 cut(s) 366, 457, 549, 725, 1209, 1373, 1427
CciI TCATGA 1 cut(s) 925
CfoI GCGC 1 cut(s) 84
Cfr13I GGNCC 4 cut(s) 37, 250, 268, 1480
Csp6I GTAC 4 cut(s) 392, 719, 1005, 1361
CspCI CAANNNNNGTGG 2 cut(s) 486, 521
CviAII CATG 4 cut(s) 154, 653, 926, 1316
CviQI GTAC 4 cut(s) 392, 719, 1005, 1361
DdeI CTNAG 3 cut(s) 170, 420, 798
DpnI GATC 8 cut(s) 290, 705, 735, 784, 1170, 1239, 1323, 1399
DpnII GATC 8 cut(s) 288, 703, 733, 782, 1168, 1237, 1321, 1397
DraIII CACNNNGTG 1 cut(s) 485
EaeI YGGCCR 1 cut(s) 494
Eam1104I CTCTTC 2 cut(s) 152, 1287
EarI CTCTTC 2 cut(s) 152, 1287
Ecl136II GAGCTC 1 cut(s) 297
Eco130I CCWWGG 4 cut(s) 504, 873, 1020, 1103
Eco24I GRGCYC 3 cut(s) 150, 299, 1163
Eco31I GGTCTC 1 cut(s) 329
Eco47I GGWCC 3 cut(s) 37, 250, 268
Eco47III AGCGCT 1 cut(s) 83
Eco53kI GAGCTC 1 cut(s) 297
Eco57I CTGAAG 2 cut(s) 1185, 1415
Eco88I CYCGRG 1 cut(s) 20
EcoICRI GAGCTC 1 cut(s) 297
EcoO109I RGGNCCY 2 cut(s) 37, 250
EcoRI GAATTC 1 cut(s) 208
EcoRII CCWGG 3 cut(s) 750, 766, 1182
EcoT14I CCWWGG 4 cut(s) 504, 873, 1020, 1103
EcoT38I GRGCYC 3 cut(s) 150, 299, 1163
ErhI CCWWGG 4 cut(s) 504, 873, 1020, 1103
Esp3I CGTCTC 2 cut(s) 110, 321
FaeI CATG 4 cut(s) 157, 656, 929, 1319
FalI AAGNNNNNCTT 2 cut(s) 1413, 1445
FaqI GGGAC 2 cut(s) 61, 1514
FatI CATG 4 cut(s) 153, 652, 925, 1315
FauI CCCGC 1 cut(s) 1428
Fnu4HI GCNGC 4 cut(s) 66, 215, 545, 1205
FokI GGATG 6 cut(s) 215, 596, 758, 835, 1400, 1424
FriOI GRGCYC 3 cut(s) 150, 299, 1163
Fsp4HI GCNGC 4 cut(s) 66, 215, 545, 1205
FspBI CTAG 4 cut(s) 357, 435, 521, 944
GlaI GCGC 1 cut(s) 83
GluI GCNGC 4 cut(s) 66, 215, 545, 1205
GsaI CCCAGC 1 cut(s) 82
GsuI CTGGAG 1 cut(s) 1205
HaeII RGCGCY 1 cut(s) 85
HaeIII GGCC 6 cut(s) 315, 496, 1108, 1425, 1481, 1510
HapII CCGG 1 cut(s) 1235
HhaI GCGC 1 cut(s) 84
Hin1II CATG 4 cut(s) 157, 656, 929, 1319
Hin6I GCGC 1 cut(s) 82
HinP1I GCGC 1 cut(s) 82
HincII GTYRAC 1 cut(s) 1246
HindII GTYRAC 1 cut(s) 1246
HindIII AAGCTT 1 cut(s) 560
HinfI GANTC 3 cut(s) 182, 1253, 1268
HpaI GTTAAC 1 cut(s) 1246
HpaII CCGG 1 cut(s) 1235
HphI GGTGA 1 cut(s) 310
Hpy166II GTNNAC 3 cut(s) 268, 809, 1246
Hpy188III TCNNGA 6 cut(s) 292, 357, 926, 1112, 1172, 1444
Hpy8I GTNNAC 3 cut(s) 268, 809, 1246
Hpy99I CGWCG 3 cut(s) 114, 335, 697
HpyAV CCTTC 5 cut(s) 157, 571, 1132, 1359, 1415
HpyCH4III ACNGT 3 cut(s) 75, 693, 715
HpyCH4IV ACGT 2 cut(s) 484, 1039
HpyCH4V TGCA 5 cut(s) 259, 544, 551, 902, 1466
HpyF10VI GCNNNNNNNGC 4 cut(s) 145, 350, 476, 553
HpyF3I CTNAG 3 cut(s) 170, 420, 798
HpySE526I ACGT 2 cut(s) 484, 1039
Hsp92II CATG 4 cut(s) 157, 656, 929, 1319
HspAI GCGC 1 cut(s) 82
KspAI GTTAAC 1 cut(s) 1246
Kzo9I GATC 8 cut(s) 288, 703, 733, 782, 1168, 1237, 1321, 1397
LmnI GCTCC 9 cut(s) 21, 65, 145, 526, 857, 919, 1141, 1158, 1189
Lsp1109I GCAGC 4 cut(s) 52, 226, 556, 1216
LweI GCATC 3 cut(s) 618, 639, 792
MaeI CTAG 4 cut(s) 357, 435, 521, 944
MaeII ACGT 2 cut(s) 484, 1039
MaeIII GTNAC 6 cut(s) 220, 383, 883, 1035, 1378, 1444
MalI GATC 8 cut(s) 290, 705, 735, 784, 1170, 1239, 1323, 1399
MbiI CCGCTC 1 cut(s) 60
MboI GATC 8 cut(s) 288, 703, 733, 782, 1168, 1237, 1321, 1397
MboII GAAGA 8 cut(s) 169, 298, 423, 1061, 1178, 1241, 1304, 1313
MflI RGATCY 4 cut(s) 733, 782, 1168, 1237
MhlI GDGCHC 4 cut(s) 150, 299, 481, 1163
MlsI TGGCCA 1 cut(s) 496
MluCI AATT 8 cut(s) 195, 208, 663, 708, 759, 1058, 1124, 1176
MluNI TGGCCA 1 cut(s) 496
MmeI TCCRAC 1 cut(s) 423
Mox20I TGGCCA 1 cut(s) 496
MscI TGGCCA 1 cut(s) 496
MseI TTAA 5 cut(s) 120, 198, 516, 758, 1245
MslI CAYNNNNRTG 1 cut(s) 600
Msp20I TGGCCA 1 cut(s) 496
MspA1I CMGCKG 2 cut(s) 65, 1435
MspI CCGG 1 cut(s) 1235
MspR9I CCNGG 3 cut(s) 752, 768, 1184
Mva1269I GAATGC 1 cut(s) 366
MvaI CCWGG 3 cut(s) 752, 768, 1184
MwoI GCNNNNNNNGC 4 cut(s) 145, 350, 476, 553
NdeII GATC 8 cut(s) 288, 703, 733, 782, 1168, 1237, 1321, 1397
NlaIII CATG 4 cut(s) 157, 656, 929, 1319
NlaIV GGNNCC 6 cut(s) 147, 252, 528, 1101, 1160, 1239
NmuCI GTSAC 3 cut(s) 383, 883, 1444
PagI TCATGA 1 cut(s) 925
PctI GAATGC 1 cut(s) 366
PfeI GAWTC 3 cut(s) 182, 1253, 1268
PflFI GACNNNGTC 2 cut(s) 881, 936
PkrI GCNGC 4 cut(s) 67, 216, 546, 1206
Ppu21I YACGTR 2 cut(s) 485, 1040
PpuMI RGGWCCY 2 cut(s) 37, 250
Psp124BI GAGCTC 1 cut(s) 299
Psp5II RGGWCCY 2 cut(s) 37, 250
Psp6I CCWGG 3 cut(s) 750, 766, 1182
PspFI CCCAGC 1 cut(s) 78
PspGI CCWGG 3 cut(s) 750, 766, 1182
PspN4I GGNNCC 6 cut(s) 147, 252, 528, 1101, 1160, 1239
PspPI GGNCC 4 cut(s) 37, 250, 268, 1480
PspPPI RGGWCCY 2 cut(s) 37, 250
PsuI RGATCY 4 cut(s) 733, 782, 1168, 1237
PsyI GACNNNGTC 2 cut(s) 881, 936
RsaI GTAC 4 cut(s) 393, 720, 1006, 1362
RsaNI GTAC 4 cut(s) 392, 719, 1005, 1361
RseI CAYNNNNRTG 1 cut(s) 600
SacI GAGCTC 1 cut(s) 299
SaqAI TTAA 5 cut(s) 120, 198, 516, 758, 1245
SatI GCNGC 4 cut(s) 66, 215, 545, 1205
Sau3AI GATC 8 cut(s) 288, 703, 733, 782, 1168, 1237, 1321, 1397
Sau96I GGNCC 4 cut(s) 37, 250, 268, 1480
ScaI AGTACT 1 cut(s) 393
ScrFI CCNGG 3 cut(s) 752, 768, 1184
SduI GDGCHC 4 cut(s) 150, 299, 481, 1163
SfaNI GCATC 3 cut(s) 618, 639, 792
SfcI CTRYAG 2 cut(s) 322, 714
SinI GGWCC 3 cut(s) 37, 250, 268
SmiMI CAYNNNNRTG 1 cut(s) 600
SmlI CTYRAG 2 cut(s) 395, 698
SmoI CTYRAG 2 cut(s) 395, 698
Sse9I AATT 8 cut(s) 195, 208, 663, 708, 759, 1058, 1124, 1176
SsiI CCGC 4 cut(s) 58, 63, 941, 1435
SspMI CTAG 4 cut(s) 357, 435, 521, 944
SstI GAGCTC 1 cut(s) 299
StyD4I CCNGG 3 cut(s) 750, 766, 1182
StyI CCWWGG 4 cut(s) 504, 873, 1020, 1103
TaaI ACNGT 3 cut(s) 75, 693, 715
TaiI ACGT 2 cut(s) 487, 1042
TaqI TCGA 3 cut(s) 112, 706, 1396
TasI AATT 8 cut(s) 195, 208, 663, 708, 759, 1058, 1124, 1176
TatI WGTACW 1 cut(s) 391
TfiI GAWTC 3 cut(s) 182, 1253, 1268
Tru1I TTAA 5 cut(s) 120, 198, 516, 758, 1245
Tru9I TTAA 5 cut(s) 120, 198, 516, 758, 1245
TseFI GTSAC 3 cut(s) 383, 883, 1444
TseI GCWGC 4 cut(s) 65, 214, 544, 1204
Tsp45I GTSAC 3 cut(s) 383, 883, 1444
TspDTI ATGAA 7 cut(s) 170, 584, 879, 1057, 1299, 1305, 1320
TspGWI ACGGA 4 cut(s) 92, 98, 906, 1171
Tth111I GACNNNGTC 2 cut(s) 881, 936
VpaK11BI GGWCC 3 cut(s) 37, 250, 268
XapI RAATTY 3 cut(s) 208, 1058, 1124
XbaI TCTAGA 1 cut(s) 356
XcmI CCANNNNNNNNNTGG 1 cut(s) 1101
XspI CTAG 4 cut(s) 357, 435, 521, 944
ZrmI AGTACT 1 cut(s) 393
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.