Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0005103

Physical Location & Seq

Genomic Coordinates Reverse (-)

61296747 .. 61300586

Gene Structure 3840 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00268160.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1533 bp

ATGGCGACCACCCTTCTCCCGGAGACAGCTCAGAAGGTCCTAACCCAAGAAGCCATCCGCTCCGCCGCCAAACAGTCCGAGCGCTGCCTCACTGTCCCCATCAAACTCCGCCGCGCCATTAAAAAGTACCTCCGAGACCAAGAGGAGCCTCACATGAAGCGGAAGGTGCTGAGGCTATCGGAATCCTTCACCCAAATCAAGGATGTCAACTCTCAGCTTATTGCTTCCACCTCGAAGCAGCTGGTTGAGGACCCTTTGCAGTGTGTGGACCAATCCCAGAGGTGGAAGATCAAGAGCTCCTATGGAGATATTGGCCTTACTTATAGAGACGACGAGACCATTGCTTATGTTGCTTCCAGAATGCCTGCTGTCTTCTCTGCTTGTCACAGAGTACTCAAGGAGGTTCGTAGAAGGCTGCCGGGTTTTTCTCCTGCTAAAGTGTTGGATTTTGGTGCTGGCACGGGTTCGGCTTTCTGGGCACTACGAGAAGTCTGGCCGAATTCCTTGGAGAAAGTTAACTTAGTAGAGCCGTCACAATCAATGCAGCGTGCAGGCCAGAGCCTTATACAAGGTCAGAAGAACTTACCACTTATTCACAGTTATGGTACCCTCCAATCGTTGACTAAAAGCATCAACAAATCAGAGAGAGAACATGACCTTGTAATTGCTTCCTATGTGCTTGGAGAGATACCATCACTGAAGGATCGAATTACTGTAGTACGCCAACTTTGGGATCTTACGCGGGATGTCCTGATTTTGATAGAACCAGGAACACCGCAAGGATCAAATATCATATCTCAGATGCGATCACATATATTATGGATGGAGAAAAGGAAATGCTGTAAATCCAAGGCTGCAATTGATGAAACTTCCAAGGACTTGGTAGTGGCTCGAAAAAGTGGTGCCTATATAGTTGCTCCTTGCTCTCATGATGGAGCATGTCCTTTGGAGAAAGCTGGTAAATATTGTCATTTTGTTCAACGTTTGGAGAGAACTTCTACTCAGCGTGCGTACAAGCGCTCCAAGGGTGGTCAGCCGTTACGTGGATTTGAAGATGAGAAATTTAGCTTCATTGCTGTCAGGCGAGGACAAAGACCAAGGGAACCTTGGCCTCTTGATGGTGTGAAATCTGAGACTTTGAAGGAGCAACATGCTAAAAGAACCCTGGAAGATCTTGAAATCGACTATGAGGACCAAGTCAGCTCGCAACACGCTAGCCTTATTCCATTTGAAAAACCAGATCCGGTTACCTATGATTCTGATGTCGTGGAGGTTGATGATCATGAGGATAATGAAGAAGAGGAGGAGGAAGATGACACAGGTCATGCCGATCTTGGGGGTGGTTGGGGTAGGATTATCTACATGCCTGTTCGGAGGGGCAAGCAGGTTACTATGGATGTCTGTCGATCAACCAACCAGGATGCTTCAGAAGGAACACTTCAACGAATTGTTGTCACAAAGAATAAGAACCCTACATTACATAAGCAGGCCCGAAAGTCTCTCTGGGGAGACTTGTGGCCCTTTCAAAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0031974 GO:0031981 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0070013

KEGG Pathways

Metabolic & Signaling

ko00480 map00480

Pfam Domains

Protein Families

Rsm22

Protein Analysis

510

Amino Acids

57.92

Weight (kDa)

8.84

Isoelectric Point (pI)

59.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rsm22	PF09243	112 - 369	4.7e-48	Mitochondrial small ribosomal subunit Rsm22
Methyltransf_23	PF13489	131 - 234	6.1e-06	Methyltransferase domain
Rsm22	PF09243	442 - 507	1.9e-09	Mitochondrial small ribosomal subunit Rsm22

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005103)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G64600
fragaria_vesca	FvH4_5g11440 FvH4_5g11440 FvH4_5g11440 FvH4_5g11440
malus_domestica	MD06G1113800.v1.1 MD14G1134800.v1.1
prunus_persica	Prupe.5G126500_v2.0.a1 Prupe.5G126500_v2.0.a1 Prupe.5G126500_v2.0.a1
pyrus_communis	pycom06g10630
rosa_chinensis	RchiOBHm_Chr2g0131571 RchiOBHm_Chr2g0164461 RchiOBHm_Chr7g0186411 RchiOBHm_Chr7g0186431
rosa_laevigata	RLG00000004846
rosa_multiflora	Rmu_sc0000645.1_g000044
rosa_roxburghii	Rroxscaffold_2G00076410 Rroxscaffold_3G00268160
rosa_rugosa	Rorug02G0594900 Rorug06G0474000 Rorug06G0474000
rosa_samantha	Rh7AG067300 Rh7BG083100 Rh7BG171200 Rh7CG080600 Rh7CG235500 Rh7DG081200
rosa_wichuraiana	Rw7G006770 Rw7G007000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1375
Acc65I	GGTACC	1 cut(s)	605
AccB1I	GGYRCC	2 cut(s)	605, 902
AccBSI	CCGCTC	1 cut(s)	60
AccII	CGCG	2 cut(s)	114, 742
AciI	CCGC	8 cut(s)	58, 63, 66, 109, 112, 160, 742, 776
AclI	AACGTT	1 cut(s)	982
AclWI	GGATC	4 cut(s)	711, 741, 790, 1235
AcoI	YGGCCR	1 cut(s)	494
AcsI	RAATTY	2 cut(s)	499, 1061
AcuI	CTGAAG	2 cut(s)	719, 1410
AfaI	GTAC	5 cut(s)	128, 393, 607, 720, 1013
AfeI	AGCGCT	2 cut(s)	83, 1019
AfiI	CCNNNNNNNGG	7 cut(s)	19, 199, 282, 730, 1043, 1118, 1335
AgsI	TTSAA	7 cut(s)	980, 1052, 1141, 1178, 1232, 1442, 1526
AjnI	CCWGG	3 cut(s)	766, 1164, 1416
AluBI	AGCT	7 cut(s)	29, 217, 241, 297, 956, 1068, 1203
AluI	AGCT	7 cut(s)	29, 217, 241, 297, 956, 1068, 1203
Alw21I	GWGCWC	1 cut(s)	299
Alw26I	GTCTC	7 cut(s)	17, 129, 321, 329, 1127, 1503, 1503
AlwI	GGATC	4 cut(s)	711, 741, 790, 1235
Aor51HI	AGCGCT	2 cut(s)	83, 1019
AoxI	GGCC	6 cut(s)	313, 494, 553, 1109, 1488, 1517
ApeKI	GCWGC	5 cut(s)	84, 238, 415, 544, 854
ApoI	RAATTY	2 cut(s)	499, 1061
Asp718I	GGTACC	1 cut(s)	605
AspLEI	GCGC	3 cut(s)	84, 116, 1020
AspS9I	GGNCC	6 cut(s)	37, 250, 268, 1192, 1489, 1518
AsuC2I	CCSGG	2 cut(s)	20, 420
AsuHPI	GGTGA	1 cut(s)	181
AsuNHI	GCTAGC	1 cut(s)	1214
AvaII	GGWCC	4 cut(s)	37, 250, 268, 1192
BaeGI	GKGCMC	1 cut(s)	481
BanI	GGYRCC	2 cut(s)	605, 902
BanII	GRGCYC	1 cut(s)	299
BbsI	GAAGAC	1 cut(s)	364
Bbv12I	GWGCWC	1 cut(s)	299
BbvCI	CCTCAGC	1 cut(s)	170
BbvI	GCAGC	5 cut(s)	71, 250, 402, 556, 841
BccI	CCATC	6 cut(s)	62, 107, 700, 817, 926, 1112
BceAI	ACGGC	2 cut(s)	514, 1021
BcgI	CGANNNNNNTGC	2 cut(s)	323, 357
BciT130I	CCWGG	3 cut(s)	768, 1166, 1418
BclI	TGATCA	1 cut(s)	1279
BcnI	CCSGG	2 cut(s)	20, 420
BcoDI	GTCTC	7 cut(s)	17, 129, 321, 329, 1127, 1503, 1503
BfaI	CTAG	1 cut(s)	1215
BfmI	CTRYAG	1 cut(s)	714
BfoI	RGCGCY	2 cut(s)	85, 1021
BfuAI	ACCTGC	1 cut(s)	1375
BglII	AGATCT	1 cut(s)	1171
BisI	GCNGC	7 cut(s)	66, 85, 112, 239, 416, 545, 855
BlsI	GCNGC	7 cut(s)	67, 86, 113, 240, 417, 546, 856
BmcAI	AGTACT	1 cut(s)	393
Bme1390I	CCNGG	5 cut(s)	20, 420, 768, 1166, 1418
Bme18I	GGWCC	4 cut(s)	37, 250, 268, 1192
BmgT120I	GGNCC	6 cut(s)	37, 250, 268, 1192, 1489, 1518
BmiI	GGNNCC	5 cut(s)	147, 252, 607, 904, 1104
BmrFI	CCNGG	5 cut(s)	20, 420, 768, 1166, 1418
BmsI	GCATC	3 cut(s)	639, 792, 1411
BmtI	GCTAGC	1 cut(s)	1218
BoxI	GACNNNNGTC	1 cut(s)	1320
BpiI	GAAGAC	1 cut(s)	364
Bpu10I	CCTNAGC	1 cut(s)	170
BpuEI	CTTGAG	1 cut(s)	380
BpuMI	CCSGG	2 cut(s)	20, 420
BsaAI	YACGTR	1 cut(s)	1043
BsaI	GGTCTC	2 cut(s)	129, 329
BsaJI	CCNNGG	7 cut(s)	504, 849, 873, 1023, 1097, 1106, 1164
BsaWI	WCCGGW	1 cut(s)	1243
BsaXI	ACNNNNNCTCC	2 cut(s)	1004, 1034
Bsc4I	CCNNNNNNNGG	7 cut(s)	19, 199, 282, 730, 1043, 1118, 1335
Bse3DI	GCAATG	2 cut(s)	339, 1071
BseBI	CCWGG	3 cut(s)	768, 1166, 1418
BseDI	CCNNGG	7 cut(s)	504, 849, 873, 1023, 1097, 1106, 1164
BseGI	GGATG	6 cut(s)	54, 208, 751, 828, 1402, 1426
BseLI	CCNNNNNNNGG	7 cut(s)	19, 199, 282, 730, 1043, 1118, 1335
BseMI	GCAATG	2 cut(s)	339, 1071
BseMII	CTCAG	6 cut(s)	44, 161, 227, 812, 1016, 1122
BseRI	GAGGAG	3 cut(s)	158, 1316, 1319
BseSI	GKGCMC	1 cut(s)	481
BseXI	GCAGC	5 cut(s)	71, 250, 402, 556, 841
BsgI	GTGCAG	1 cut(s)	570
Bsh1236I	CGCG	2 cut(s)	114, 742
BshFI	GGCC	6 cut(s)	315, 496, 555, 1111, 1490, 1519
BshNI	GGYRCC	2 cut(s)	605, 902
BsiHKAI	GWGCWC	1 cut(s)	299
BsiSI	CCGG	3 cut(s)	20, 419, 1244
BslFI	GGGAC	1 cut(s)	80
BslI	CCNNNNNNNGG	7 cut(s)	19, 199, 282, 730, 1043, 1118, 1335
BsmAI	GTCTC	7 cut(s)	17, 129, 321, 329, 1127, 1503, 1503
BsmBI	CGTCTC	1 cut(s)	321
BsmFI	GGGAC	1 cut(s)	80
BsmI	GAATGC	1 cut(s)	366
BsnI	GGCC	6 cut(s)	315, 496, 555, 1111, 1490, 1519
Bso31I	GGTCTC	2 cut(s)	129, 329
Bsp1286I	GDGCHC	2 cut(s)	299, 481
BspACI	CCGC	8 cut(s)	58, 63, 66, 109, 112, 160, 742, 776
BspANI	GGCC	6 cut(s)	315, 496, 555, 1111, 1490, 1519
BspCNI	CTCAG	6 cut(s)	43, 162, 226, 811, 1015, 1123
BspFNI	CGCG	2 cut(s)	114, 742
BspHI	TCATGA	2 cut(s)	928, 1282
BspLI	GGNNCC	5 cut(s)	147, 252, 607, 904, 1104
BspMI	ACCTGC	1 cut(s)	1375
BspOI	GCTAGC	1 cut(s)	1218
BspPI	GGATC	4 cut(s)	711, 741, 790, 1235
BspT107I	GGYRCC	2 cut(s)	605, 902
BspTNI	GGTCTC	2 cut(s)	129, 329
BsrBI	CCGCTC	1 cut(s)	60
BsrDI	GCAATG	2 cut(s)	339, 1071
BssECI	CCNNGG	7 cut(s)	504, 849, 873, 1023, 1097, 1106, 1164
BssT1I	CCWWGG	6 cut(s)	504, 849, 873, 1023, 1097, 1106
Bst2UI	CCWGG	3 cut(s)	768, 1166, 1418
Bst4CI	ACNGT	4 cut(s)	75, 94, 599, 715
Bst6I	CTCTTC	1 cut(s)	1293
BstBAI	YACGTR	1 cut(s)	1043
BstC8I	GCNNGC	9 cut(s)	366, 457, 549, 553, 1008, 1205, 1216, 1382, 1488
BstDEI	CTNAG	7 cut(s)	30, 170, 213, 520, 798, 1002, 1131
BstEII	GGTNACC	1 cut(s)	1246
BstF5I	GGATG	6 cut(s)	54, 208, 751, 828, 1402, 1426
BstFNI	CGCG	2 cut(s)	114, 742
BstH2I	RGCGCY	2 cut(s)	85, 1021
BstHHI	GCGC	3 cut(s)	84, 116, 1020
BstMAI	GTCTC	7 cut(s)	17, 129, 321, 329, 1127, 1503, 1503
BstMWI	GCNNNNNNNGC	3 cut(s)	166, 350, 476
BstNI	CCWGG	3 cut(s)	768, 1166, 1418
BstNSI	RCATGY	3 cut(s)	942, 1154, 1366
BstPAI	GACNNNNGTC	1 cut(s)	1320
BstPI	GGTNACC	1 cut(s)	1246
BstSCI	CCNGG	5 cut(s)	18, 418, 766, 1164, 1416
BstSFI	CTRYAG	1 cut(s)	714
BstSLI	GKGCMC	1 cut(s)	481
BstUI	CGCG	2 cut(s)	114, 742
BstV1I	GCAGC	5 cut(s)	71, 250, 402, 556, 841
BstV2I	GAAGAC	1 cut(s)	364
BstX2I	RGATCY	3 cut(s)	733, 1171, 1240
BstXI	CCANNNNNNTGG	1 cut(s)	880
BstYI	RGATCY	3 cut(s)	733, 1171, 1240
BsuRI	GGCC	6 cut(s)	315, 496, 555, 1111, 1490, 1519
BtsCI	GGATG	6 cut(s)	54, 208, 751, 828, 1402, 1426
BtsI	GCAGTG	1 cut(s)	266
BtsIMutI	CAGTG	3 cut(s)	90, 266, 695
BveI	ACCTGC	1 cut(s)	1375
Cac8I	GCNNGC	9 cut(s)	366, 457, 549, 553, 1008, 1205, 1216, 1382, 1488
CciI	TCATGA	2 cut(s)	928, 1282
CfoI	GCGC	3 cut(s)	84, 116, 1020
Cfr13I	GGNCC	6 cut(s)	37, 250, 268, 1192, 1489, 1518
Csp6I	GTAC	5 cut(s)	127, 392, 606, 719, 1012
CviAII	CATG	8 cut(s)	154, 653, 929, 939, 1151, 1283, 1325, 1363
CviQI	GTAC	5 cut(s)	127, 392, 606, 719, 1012
DdeI	CTNAG	7 cut(s)	30, 170, 213, 520, 798, 1002, 1131
EaeI	YGGCCR	1 cut(s)	494
Eam1104I	CTCTTC	1 cut(s)	1293
EarI	CTCTTC	1 cut(s)	1293
EciI	GGCGGA	2 cut(s)	52, 98
Ecl136II	GAGCTC	1 cut(s)	297
Eco130I	CCWWGG	6 cut(s)	504, 849, 873, 1023, 1097, 1106
Eco24I	GRGCYC	1 cut(s)	299
Eco31I	GGTCTC	2 cut(s)	129, 329
Eco47I	GGWCC	4 cut(s)	37, 250, 268, 1192
Eco47III	AGCGCT	2 cut(s)	83, 1019
Eco53kI	GAGCTC	1 cut(s)	297
Eco57I	CTGAAG	2 cut(s)	719, 1410
Eco91I	GGTNACC	1 cut(s)	1246
EcoICRI	GAGCTC	1 cut(s)	297
EcoO109I	RGGNCCY	2 cut(s)	37, 250
EcoO65I	GGTNACC	1 cut(s)	1246
EcoRI	GAATTC	1 cut(s)	499
EcoRII	CCWGG	3 cut(s)	766, 1164, 1416
EcoT14I	CCWWGG	6 cut(s)	504, 849, 873, 1023, 1097, 1106
EcoT38I	GRGCYC	1 cut(s)	299
ErhI	CCWWGG	6 cut(s)	504, 849, 873, 1023, 1097, 1106
Esp3I	CGTCTC	1 cut(s)	321
FaeI	CATG	8 cut(s)	157, 656, 932, 942, 1154, 1286, 1328, 1366
FalI	AAGNNNNNCTT	4 cut(s)	1090, 1122, 1422, 1454
FaqI	GGGAC	1 cut(s)	80
FatI	CATG	8 cut(s)	153, 652, 928, 938, 1150, 1282, 1324, 1362
FauI	CCCGC	1 cut(s)	735
FbaI	TGATCA	1 cut(s)	1279
Fnu4HI	GCNGC	7 cut(s)	66, 85, 112, 239, 416, 545, 855
FokI	GGATG	6 cut(s)	41, 215, 758, 835, 1409, 1433
FriOI	GRGCYC	1 cut(s)	299
Fsp4HI	GCNGC	7 cut(s)	66, 85, 112, 239, 416, 545, 855
FspBI	CTAG	1 cut(s)	1215
GlaI	GCGC	3 cut(s)	83, 115, 1019
GluI	GCNGC	7 cut(s)	66, 85, 112, 239, 416, 545, 855
HaeII	RGCGCY	2 cut(s)	85, 1021
HaeIII	GGCC	6 cut(s)	315, 496, 555, 1111, 1490, 1519
HapII	CCGG	3 cut(s)	20, 419, 1244
HhaI	GCGC	3 cut(s)	84, 116, 1020
Hin1II	CATG	8 cut(s)	157, 656, 932, 942, 1154, 1286, 1328, 1366
Hin6I	GCGC	3 cut(s)	82, 114, 1018
HinP1I	GCGC	3 cut(s)	82, 114, 1018
HincII	GTYRAC	3 cut(s)	208, 517, 621
HindII	GTYRAC	3 cut(s)	208, 517, 621
HinfI	GANTC	2 cut(s)	182, 1256
HpaI	GTTAAC	1 cut(s)	517
HpaII	CCGG	3 cut(s)	20, 419, 1244
HphI	GGTGA	1 cut(s)	181
Hpy166II	GTNNAC	4 cut(s)	208, 268, 517, 621
Hpy188III	TCNNGA	7 cut(s)	292, 357, 751, 929, 1115, 1175, 1283
Hpy8I	GTNNAC	4 cut(s)	208, 268, 517, 621
Hpy99I	CGWCG	1 cut(s)	335
HpyAV	CCTTC	8 cut(s)	23, 28, 157, 196, 405, 694, 1135, 1424
HpyCH4III	ACNGT	4 cut(s)	75, 94, 599, 715
HpyCH4IV	ACGT	2 cut(s)	982, 1042
HpyCH4V	TGCA	4 cut(s)	259, 544, 551, 857
HpyF10VI	GCNNNNNNNGC	3 cut(s)	166, 350, 476
HpyF3I	CTNAG	7 cut(s)	30, 170, 213, 520, 798, 1002, 1131
HpySE526I	ACGT	2 cut(s)	982, 1042
Hsp92II	CATG	8 cut(s)	157, 656, 932, 942, 1154, 1286, 1328, 1366
HspAI	GCGC	3 cut(s)	82, 114, 1018
KpnI	GGTACC	1 cut(s)	609
Ksp22I	TGATCA	1 cut(s)	1279
KspAI	GTTAAC	1 cut(s)	517
LmnI	GCTCC	7 cut(s)	65, 145, 302, 922, 935, 1025, 1144
Lsp1109I	GCAGC	5 cut(s)	71, 250, 402, 556, 841
LweI	GCATC	3 cut(s)	639, 792, 1411
MaeI	CTAG	1 cut(s)	1215
MaeII	ACGT	2 cut(s)	982, 1042
MaeIII	GTNAC	6 cut(s)	383, 531, 1038, 1246, 1387, 1453
MbiI	CCGCTC	1 cut(s)	60
MboII	GAAGA	8 cut(s)	298, 364, 589, 1064, 1181, 1307, 1310, 1322
MfeI	CAATTG	1 cut(s)	858
MflI	RGATCY	3 cut(s)	733, 1171, 1240
MhlI	GDGCHC	2 cut(s)	299, 481
MluCI	AATT	6 cut(s)	499, 663, 708, 858, 1061, 1446
MmeI	TCCRAC	1 cut(s)	423
MseI	TTAA	2 cut(s)	120, 516
MslI	CAYNNNNRTG	1 cut(s)	600
MspA1I	CMGCKG	1 cut(s)	241
MspI	CCGG	3 cut(s)	20, 419, 1244
MspR9I	CCNGG	5 cut(s)	20, 420, 768, 1166, 1418
MunI	CAATTG	1 cut(s)	858
Mva1269I	GAATGC	1 cut(s)	366
MvaI	CCWGG	3 cut(s)	768, 1166, 1418
MvnI	CGCG	2 cut(s)	114, 742
MwoI	GCNNNNNNNGC	3 cut(s)	166, 350, 476
NciI	CCSGG	2 cut(s)	20, 420
NheI	GCTAGC	1 cut(s)	1214
NlaIII	CATG	8 cut(s)	157, 656, 932, 942, 1154, 1286, 1328, 1366
NlaIV	GGNNCC	5 cut(s)	147, 252, 607, 904, 1104
NmuCI	GTSAC	3 cut(s)	383, 531, 1453
NspI	RCATGY	3 cut(s)	942, 1154, 1366
PagI	TCATGA	2 cut(s)	928, 1282
PctI	GAATGC	1 cut(s)	366
PfeI	GAWTC	2 cut(s)	182, 1256
PflFI	GACNNNGTC	1 cut(s)	1196
PfoI	TCCNGGA	1 cut(s)	18
PkrI	GCNGC	7 cut(s)	67, 86, 113, 240, 417, 546, 856
Ppu21I	YACGTR	1 cut(s)	1043
PpuMI	RGGWCCY	2 cut(s)	37, 250
PshAI	GACNNNNGTC	1 cut(s)	1320
Psp124BI	GAGCTC	1 cut(s)	299
Psp1406I	AACGTT	1 cut(s)	982
Psp5II	RGGWCCY	2 cut(s)	37, 250
Psp6I	CCWGG	3 cut(s)	766, 1164, 1416
PspEI	GGTNACC	1 cut(s)	1246
PspGI	CCWGG	3 cut(s)	766, 1164, 1416
PspN4I	GGNNCC	5 cut(s)	147, 252, 607, 904, 1104
PspPI	GGNCC	6 cut(s)	37, 250, 268, 1192, 1489, 1518
PspPPI	RGGWCCY	2 cut(s)	37, 250
PsuI	RGATCY	3 cut(s)	733, 1171, 1240
PsyI	GACNNNGTC	1 cut(s)	1196
PvuII	CAGCTG	1 cut(s)	241
RsaI	GTAC	5 cut(s)	128, 393, 607, 720, 1013
RsaNI	GTAC	5 cut(s)	127, 392, 606, 719, 1012
RseI	CAYNNNNRTG	1 cut(s)	600
SacI	GAGCTC	1 cut(s)	299
SaqAI	TTAA	2 cut(s)	120, 516
SatI	GCNGC	7 cut(s)	66, 85, 112, 239, 416, 545, 855
Sau96I	GGNCC	6 cut(s)	37, 250, 268, 1192, 1489, 1518
ScaI	AGTACT	1 cut(s)	393
ScrFI	CCNGG	5 cut(s)	20, 420, 768, 1166, 1418
SduI	GDGCHC	2 cut(s)	299, 481
SfaNI	GCATC	3 cut(s)	639, 792, 1411
SfcI	CTRYAG	1 cut(s)	714
SinI	GGWCC	4 cut(s)	37, 250, 268, 1192
SmiMI	CAYNNNNRTG	1 cut(s)	600
SmlI	CTYRAG	1 cut(s)	395
SmoI	CTYRAG	1 cut(s)	395
Sse9I	AATT	6 cut(s)	499, 663, 708, 858, 1061, 1446
SsiI	CCGC	8 cut(s)	58, 63, 66, 109, 112, 160, 742, 776
SspI	AATATT	1 cut(s)	965
SspMI	CTAG	1 cut(s)	1215
SstI	GAGCTC	1 cut(s)	299
StyD4I	CCNGG	5 cut(s)	18, 418, 766, 1164, 1416
StyI	CCWWGG	6 cut(s)	504, 849, 873, 1023, 1097, 1106
TaaI	ACNGT	4 cut(s)	75, 94, 599, 715
TaiI	ACGT	2 cut(s)	985, 1045
TaqI	TCGA	5 cut(s)	233, 706, 892, 1182, 1405
TasI	AATT	6 cut(s)	499, 663, 708, 858, 1061, 1446
TatI	WGTACW	1 cut(s)	391
TauI	GCSGC	2 cut(s)	68, 114
TfiI	GAWTC	2 cut(s)	182, 1256
Tru1I	TTAA	2 cut(s)	120, 516
Tru9I	TTAA	2 cut(s)	120, 516
TscAI	CASTG	3 cut(s)	97, 266, 702
TseFI	GTSAC	3 cut(s)	383, 531, 1453
TseI	GCWGC	5 cut(s)	84, 238, 415, 544, 854
Tsp45I	GTSAC	3 cut(s)	383, 531, 1453
TspDTI	ATGAA	4 cut(s)	170, 879, 1060, 1308
TspRI	CASTG	3 cut(s)	97, 266, 702
Tth111I	GACNNNGTC	1 cut(s)	1196
VpaK11BI	GGWCC	4 cut(s)	37, 250, 268, 1192
XapI	RAATTY	2 cut(s)	499, 1061
XceI	RCATGY	3 cut(s)	942, 1154, 1366
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1104
XspI	CTAG	1 cut(s)	1215
ZrmI	AGTACT	1 cut(s)	393

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.