Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0015303

Physical Location & Seq

Genomic Coordinates Forward (+)

12873744 .. 12874574

Gene Structure 831 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G135700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 516 bp

ATGACCAACGAGTCAGTCAAAAACTGCAGCCATGATGCAGGCAAGCACAAACAACTCGACAGAGAAATCAGAGACATGGTCTCTGTCATCACCAACCGAGTCACTGACCTCCACAAATCTGGCTCAGTCAACCAAGAAGACGACGATGAAACCGGCGTGAGAATCATCACACTGGCTGGAAACAACAATGGAGCCTCACTGAGAAGTGAGCTGGATCATGAGAACAACAACAAGCCAGCAGGGCTTCATGGTGGTGGCCCGGCATTTGGAGAGCAGCCTGATGGGTTGAGCACTTATGTGAACAGCAATTTCCAGAGCGTGAACAACTCTCTTATGATGGGTGGCAGCTACAGCACGAATGATCCCGGTGTTCGGGTGGATATCACTGATGTTGTGGAGCCTCATGGGTATCATATCAAGCCGGAGAAGCGTGGATGGAAGGGGAAGAAGAAGGAGAAGGAGAAGGAGAGGGAAAACATCCACAGTGACCAACATCATGAGCATGATGATGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

172

Amino Acids

18.99

Weight (kDa)

5.63

Isoelectric Point (pI)

30.19

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0015303)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G63310
fragaria_vesca	FvH4_5g10310
malus_domestica	MD00G1118700.v1.1 MD06G1125100.v1.1
prunus_persica	Prupe.5G135700_v2.0.a1
pyrus_communis	pycom14g11720
rosa_chinensis	RchiOBHm_Chr7g0187911
rosa_laevigata	RLG00000004748
rosa_multiflora	Rmu_co8094926.1_g000001
rosa_roxburghii	Rroxscaffold_3G00266950
rosa_rugosa	Rorug06G0485300
rosa_samantha	Rh7AG090500 Rh7BG092100 Rh7CG091200 Rh7DG092900
rosa_wichuraiana	Rw7G007810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	10
AclWI	GGATC	2 cut(s)	222, 356
AfiI	CCNNNNNNNGG	2 cut(s)	266, 372
AleI	CACNNNNGTG	1 cut(s)	296
AluBI	AGCT	2 cut(s)	211, 348
AluI	AGCT	2 cut(s)	211, 348
Alw21I	GWGCWC	1 cut(s)	293
Alw26I	GTCTC	2 cut(s)	66, 85
AlwI	GGATC	2 cut(s)	222, 356
AoxI	GGCC	1 cut(s)	256
ApeKI	GCWGC	3 cut(s)	27, 274, 345
AspS9I	GGNCC	1 cut(s)	257
AsuC2I	CCSGG	2 cut(s)	260, 366
AsuHPI	GGTGA	1 cut(s)	82
BbsI	GAAGAC	1 cut(s)	144
Bbv12I	GWGCWC	1 cut(s)	293
BbvI	GCAGC	3 cut(s)	39, 286, 357
BccI	CCATC	3 cut(s)	275, 331, 429
BcnI	CCSGG	2 cut(s)	260, 366
BcoDI	GTCTC	2 cut(s)	66, 85
BfmI	CTRYAG	2 cut(s)	25, 349
BglI	GCCNNNNNGGC	1 cut(s)	241
BisI	GCNGC	3 cut(s)	28, 275, 346
BlsI	GCNGC	3 cut(s)	29, 276, 347
Bme1390I	CCNGG	2 cut(s)	260, 366
BmgT120I	GGNCC	1 cut(s)	257
BmiI	GGNNCC	2 cut(s)	193, 399
BmrFI	CCNGG	2 cut(s)	260, 366
BmsI	GCATC	1 cut(s)	25
BpiI	GAAGAC	1 cut(s)	144
BpuMI	CCSGG	2 cut(s)	260, 366
BsaI	GGTCTC	1 cut(s)	85
Bsc4I	CCNNNNNNNGG	2 cut(s)	266, 372
Bse118I	RCCGGY	1 cut(s)	152
Bse1I	ACTGG	1 cut(s)	177
BseGI	GGATG	2 cut(s)	440, 477
BseLI	CCNNNNNNNGG	2 cut(s)	266, 372
BseMII	CTCAG	2 cut(s)	138, 191
BseNI	ACTGG	1 cut(s)	177
BseXI	GCAGC	3 cut(s)	39, 286, 357
BshFI	GGCC	1 cut(s)	258
BsiHKAI	GWGCWC	1 cut(s)	293
BsiSI	CCGG	4 cut(s)	153, 260, 366, 422
BslI	CCNNNNNNNGG	2 cut(s)	266, 372
BsmAI	GTCTC	2 cut(s)	66, 85
BsnI	GGCC	1 cut(s)	258
Bso31I	GGTCTC	1 cut(s)	85
Bsp1286I	GDGCHC	1 cut(s)	293
Bsp143I	GATC	2 cut(s)	214, 361
BspANI	GGCC	1 cut(s)	258
BspCNI	CTCAG	2 cut(s)	137, 192
BspHI	TCATGA	2 cut(s)	217, 496
BspLI	GGNNCC	2 cut(s)	193, 399
BspMAI	CTGCAG	1 cut(s)	29
BspPI	GGATC	2 cut(s)	222, 356
BspTNI	GGTCTC	1 cut(s)	85
BsrFI	RCCGGY	1 cut(s)	152
BsrI	ACTGG	1 cut(s)	177
BssAI	RCCGGY	1 cut(s)	152
BssMI	GATC	2 cut(s)	214, 361
Bst4CI	ACNGT	1 cut(s)	485
BstC8I	GCNNGC	3 cut(s)	40, 44, 237
BstDEI	CTNAG	2 cut(s)	124, 200
BstF5I	GGATG	2 cut(s)	440, 477
BstKTI	GATC	2 cut(s)	217, 364
BstMAI	GTCTC	2 cut(s)	66, 85
BstMBI	GATC	2 cut(s)	214, 361
BstMWI	GCNNNNNNNGC	3 cut(s)	241, 351, 427
BstSCI	CCNGG	2 cut(s)	258, 364
BstSFI	CTRYAG	2 cut(s)	25, 349
BstV1I	GCAGC	3 cut(s)	39, 286, 357
BstV2I	GAAGAC	1 cut(s)	144
BstXI	CCANNNNNNTGG	1 cut(s)	119
BsuRI	GGCC	1 cut(s)	258
BtsCI	GGATG	2 cut(s)	440, 477
BtsIMutI	CAGTG	5 cut(s)	102, 170, 197, 384, 490
Cac8I	GCNNGC	3 cut(s)	40, 44, 237
CciI	TCATGA	2 cut(s)	217, 496
Cfr10I	RCCGGY	1 cut(s)	152
Cfr13I	GGNCC	1 cut(s)	257
CviAII	CATG	7 cut(s)	32, 76, 218, 248, 404, 497, 503
DdeI	CTNAG	2 cut(s)	124, 200
DpnI	GATC	2 cut(s)	216, 363
DpnII	GATC	2 cut(s)	214, 361
DrdI	GACNNNNNNGTC	1 cut(s)	10
DseDI	GACNNNNNNGTC	1 cut(s)	10
Eco31I	GGTCTC	1 cut(s)	85
Eco32I	GATATC	1 cut(s)	382
EcoRV	GATATC	1 cut(s)	382
FaeI	CATG	7 cut(s)	35, 79, 221, 251, 407, 500, 506
FatI	CATG	7 cut(s)	31, 75, 217, 247, 403, 496, 502
Fnu4HI	GCNGC	3 cut(s)	28, 275, 346
FokI	GGATG	2 cut(s)	447, 464
Fsp4HI	GCNGC	3 cut(s)	28, 275, 346
GluI	GCNGC	3 cut(s)	28, 275, 346
HaeIII	GGCC	1 cut(s)	258
HapII	CCGG	4 cut(s)	153, 260, 366, 422
Hin1II	CATG	7 cut(s)	35, 79, 221, 251, 407, 500, 506
HincII	GTYRAC	1 cut(s)	130
HindII	GTYRAC	1 cut(s)	130
HinfI	GANTC	3 cut(s)	11, 99, 162
HpaII	CCGG	4 cut(s)	153, 260, 366, 422
HphI	GGTGA	1 cut(s)	82
Hpy166II	GTNNAC	3 cut(s)	130, 301, 322
Hpy188I	TCNGA	1 cut(s)	71
Hpy188III	TCNNGA	3 cut(s)	218, 313, 497
Hpy8I	GTNNAC	3 cut(s)	130, 301, 322
Hpy99I	CGWCG	1 cut(s)	146
HpyAV	CCTTC	4 cut(s)	433, 445, 451, 457
HpyCH4III	ACNGT	1 cut(s)	485
HpyCH4V	TGCA	2 cut(s)	27, 38
HpyF10VI	GCNNNNNNNGC	3 cut(s)	241, 351, 427
HpyF3I	CTNAG	2 cut(s)	124, 200
Hsp92II	CATG	7 cut(s)	35, 79, 221, 251, 407, 500, 506
Kzo9I	GATC	2 cut(s)	214, 361
LmnI	GCTCC	2 cut(s)	191, 397
Lsp1109I	GCAGC	3 cut(s)	39, 286, 357
LweI	GCATC	1 cut(s)	25
MaeIII	GTNAC	2 cut(s)	100, 485
MalI	GATC	2 cut(s)	216, 363
MboI	GATC	2 cut(s)	214, 361
MboII	GAAGA	3 cut(s)	149, 457, 460
MhlI	GDGCHC	1 cut(s)	293
MluCI	AATT	1 cut(s)	307
MlyI	GAGTC	2 cut(s)	20, 108
MnlI	CCTC	4 cut(s)	119, 205, 411, 462
MslI	CAYNNNNRTG	4 cut(s)	252, 296, 501, 507
MspI	CCGG	4 cut(s)	153, 260, 366, 422
MspR9I	CCNGG	2 cut(s)	260, 366
MwoI	GCNNNNNNNGC	3 cut(s)	241, 351, 427
NciI	CCSGG	2 cut(s)	260, 366
NdeII	GATC	2 cut(s)	214, 361
NlaIII	CATG	7 cut(s)	35, 79, 221, 251, 407, 500, 506
NlaIV	GGNNCC	2 cut(s)	193, 399
NmuCI	GTSAC	2 cut(s)	100, 485
OliI	CACNNNNGTG	1 cut(s)	296
PagI	TCATGA	2 cut(s)	217, 496
PfeI	GAWTC	1 cut(s)	162
PflFI	GACNNNGTC	1 cut(s)	77
PkrI	GCNGC	3 cut(s)	29, 276, 347
PleI	GAGTC	2 cut(s)	19, 107
PpsI	GAGTC	2 cut(s)	19, 107
PspN4I	GGNNCC	2 cut(s)	193, 399
PspPI	GGNCC	1 cut(s)	257
PstI	CTGCAG	1 cut(s)	29
PsyI	GACNNNGTC	1 cut(s)	77
RseI	CAYNNNNRTG	4 cut(s)	252, 296, 501, 507
SatI	GCNGC	3 cut(s)	28, 275, 346
Sau3AI	GATC	2 cut(s)	214, 361
Sau96I	GGNCC	1 cut(s)	257
SchI	GAGTC	2 cut(s)	20, 108
ScrFI	CCNGG	2 cut(s)	260, 366
SduI	GDGCHC	1 cut(s)	293
SetI	ASST	3 cut(s)	111, 213, 350
SfaNI	GCATC	1 cut(s)	25
SfcI	CTRYAG	2 cut(s)	25, 349
SmiMI	CAYNNNNRTG	4 cut(s)	252, 296, 501, 507
Sse9I	AATT	1 cut(s)	307
StyD4I	CCNGG	2 cut(s)	258, 364
TaaI	ACNGT	1 cut(s)	485
TaqI	TCGA	1 cut(s)	57
TasI	AATT	1 cut(s)	307
TfiI	GAWTC	1 cut(s)	162
TscAI	CASTG	5 cut(s)	109, 177, 204, 391, 490
TseFI	GTSAC	2 cut(s)	100, 485
TseI	GCWGC	3 cut(s)	27, 274, 345
Tsp45I	GTSAC	2 cut(s)	100, 485
TspDTI	ATGAA	2 cut(s)	162, 236
TspRI	CASTG	5 cut(s)	109, 177, 204, 391, 490
Tth111I	GACNNNGTC	1 cut(s)	77

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.