Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0006773

Physical Location & Seq

Genomic Coordinates Forward (+)

14547668 .. 14549931

Gene Structure 2264 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G169500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 993 bp

ATGAAGGAGACACTCAGATACTTGGCAGGAATTGCAGGCCCAAGTGGTTATGGCTCAAAATCAACTGCTGAGCAAGTTTCTCAAGATTGTTGTTCCTCAGTTCCTTCTCATCTCACTGCCATAATCACTGGAGCAACGTCAGGCATTGGAGCTGAGACAGCAAGAGTACTGGCAAAGAGAGGGGTGAGGATCGTCATCCCGGCGAGAGATTTAGGGAAGGCAGCTGAAGTGAAGGATGAAATTCAAAGAGAGAGCCCAAAGGCTGAGGTTATAATATTGGAGATTGATCTCAGCTCACTTGCTTCTGTCAACAGATTCTGCTCTGAGTTCTTGGCTCTGAGGCTACCCCTCAACATCCTCATAAACAATGGTGGAGTATTTTCTCAAGCTTTGGAGTATTCTGAAGACAAAATTGAGATGACATTTGCTACAAACTACTTGGGACATCATTTTTTGACAGAAACGCTGTTAGATAAAATGGTGGAAACAGCGGCCCAGACTGGCATCCGAGGAAGAATAATCAATGTTTCTTCTGTGATCCACAGCTGGGTCAAGAGGGATGGTTTCTGCTTCAATCAATTGCTCAACCCAAAGAATTATAATGGCACAAGAGCATATGCACAGTCCAAATTGGCTAACATATTGCATGTTAAGGAACTGGCAAGACACCTGAAGGCAAGAAATGCGAGAGTAAGCGTCAATGCGGTGCACCCGGGGATCGTGAAGACCGGAATTATAAGAGCTCACAAGGGCTTCATCACAGATTCTGTGTTCTTCATAGCATCCAAGTTACTAAAATCAACATCCCAGGGAGCTTCGACCACATGCTATGTTGCTTTGAGCCCAGAAGTAGAAGGGGTAAGTGGGAAATACTTTGCAGACTGCAATGAGAGTGACTGCTCGAACCTAGCAAATGATGAATCTGAAGCTCGTAAGTTGTGGAAGCAGACCCGTCTGCTAATCCATAGACTACTGTATCAACCAACAGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0008150 GO:0008152 GO:0009507 GO:0009526 GO:0009528 GO:0009536 GO:0009706 GO:0009941 GO:0016020 GO:0016491 GO:0019866 GO:0031090 GO:0031967 GO:0031969 GO:0031975 GO:0042170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0055114 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko00830 ko01100 map00830 map01100

Pfam Domains

Protein Families

adh_short

Protein Analysis

331

Amino Acids

36.05

Weight (kDa)

9.09

Isoelectric Point (pI)

32.98

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006773)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G50130 AT5G50130 AT5G50130 AT5G50130 AT5G50130 AT5G50130 AT5G50130 AT5G50130 AT5G50130
fragaria_vesca	FvH4_5g05830 FvH4_5g05830 FvH4_5g05830
malus_domestica	MD06G1170000.v1.1 MD14G1175600.v1.1
prunus_persica	Prupe.5G169500_v2.0.a1
pyrus_communis	pycom06g15140 pycom14g14650
rosa_chinensis	RchiOBHm_Chr7g0192991
rosa_laevigata	RLG00000004303
rosa_multiflora	Rmu_sc0002040.1_g000068
rosa_roxburghii	Rroxscaffold_3G00262470
rosa_rugosa	Rorug07G0007300
rosa_samantha	Rh7AG132100 Rh7BG133000 Rh7DG134000
rosa_wichuraiana	Rw7G011270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	272, 600, 737
AciI	CCGC	2 cut(s)	491, 704
AclWI	GGATC	3 cut(s)	197, 532, 725
AcsI	RAATTY	1 cut(s)	240
AcuI	CTGAAG	4 cut(s)	246, 423, 692, 945
AfaI	GTAC	1 cut(s)	168
AfiI	CCNNNNNNNGG	1 cut(s)	547
AgsI	TTSAA	2 cut(s)	245, 574
AjnI	CCWGG	1 cut(s)	807
AluBI	AGCT	9 cut(s)	152, 224, 294, 389, 546, 743, 815, 929, 989
AluI	AGCT	9 cut(s)	152, 224, 294, 389, 546, 743, 815, 929, 989
Alw21I	GWGCWC	2 cut(s)	711, 745
Alw26I	GTCTC	2 cut(s)	2, 149
Alw44I	GTGCAC	1 cut(s)	707
AlwI	GGATC	3 cut(s)	197, 532, 725
AlwNI	CAGNNNCTG	2 cut(s)	318, 767
Ama87I	CYCGRG	1 cut(s)	712
AoxI	GGCC	2 cut(s)	37, 492
ApaLI	GTGCAC	1 cut(s)	707
ApeKI	GCWGC	1 cut(s)	221
ApoI	RAATTY	1 cut(s)	240
AspS9I	GGNCC	2 cut(s)	38, 493
AsuC2I	CCSGG	3 cut(s)	200, 713, 714
AsuHPI	GGTGA	1 cut(s)	196
AvaI	CYCGRG	1 cut(s)	712
BaeGI	GKGCMC	1 cut(s)	711
BaeI	ACNNNNGTAYC	2 cut(s)	959, 992
BanII	GRGCYC	3 cut(s)	257, 745, 845
BbsI	GAAGAC	2 cut(s)	411, 731
Bbv12I	GWGCWC	2 cut(s)	711, 745
BbvCI	CCTCAGC	1 cut(s)	264
BbvI	GCAGC	1 cut(s)	233
BccI	CCATC	1 cut(s)	554
BciT130I	CCWGG	1 cut(s)	809
BcnI	CCSGG	3 cut(s)	200, 713, 714
BcoDI	GTCTC	2 cut(s)	2, 149
BfaI	CTAG	1 cut(s)	908
BisI	GCNGC	2 cut(s)	222, 492
BlpI	GCTNAGC	1 cut(s)	69
BlsI	GCNGC	2 cut(s)	223, 493
BmcAI	AGTACT	1 cut(s)	168
Bme1390I	CCNGG	4 cut(s)	200, 713, 714, 809
BmeT110I	CYCGRG	1 cut(s)	712
BmgT120I	GGNCC	2 cut(s)	38, 493
BmrFI	CCNGG	4 cut(s)	200, 713, 714, 809
BmsI	GCATC	2 cut(s)	513, 791
BpiI	GAAGAC	2 cut(s)	411, 731
BpmI	CTGGAG	1 cut(s)	150
Bpu10I	CCTNAGC	1 cut(s)	264
Bpu1102I	GCTNAGC	1 cut(s)	69
BpuEI	CTTGAG	2 cut(s)	66, 369
BpuMI	CCSGG	3 cut(s)	200, 713, 714
BsaBI	GATNNNNATC	1 cut(s)	194
BsaJI	CCNNGG	5 cut(s)	508, 712, 713, 807, 808
BsaWI	WCCGGW	1 cut(s)	728
Bsc4I	CCNNNNNNNGG	1 cut(s)	547
Bse1I	ACTGG	4 cut(s)	133, 174, 505, 663
Bse3DI	GCAATG	1 cut(s)	892
Bse8I	GATNNNNATC	1 cut(s)	194
BseBI	CCWGG	1 cut(s)	809
BseDI	CCNNGG	5 cut(s)	508, 712, 713, 807, 808
BseGI	GGATG	7 cut(s)	195, 241, 354, 504, 565, 782, 803
BseJI	GATNNNNATC	1 cut(s)	194
BseLI	CCNNNNNNNGG	1 cut(s)	547
BseMI	GCAATG	1 cut(s)	892
BseMII	CTCAG	8 cut(s)	28, 60, 111, 144, 255, 304, 315, 329
BseNI	ACTGG	4 cut(s)	133, 174, 505, 663
BseSI	GKGCMC	1 cut(s)	711
BseXI	GCAGC	1 cut(s)	233
BseYI	CCCAGC	1 cut(s)	546
BshFI	GGCC	2 cut(s)	39, 494
BsiHKAI	GWGCWC	2 cut(s)	711, 745
BsiHKCI	CYCGRG	1 cut(s)	712
BsiSI	CCGG	3 cut(s)	200, 713, 729
BslFI	GGGAC	1 cut(s)	456
BslI	CCNNNNNNNGG	1 cut(s)	547
BsmAI	GTCTC	2 cut(s)	2, 149
BsmFI	GGGAC	1 cut(s)	456
BsnI	GGCC	2 cut(s)	39, 494
BsoBI	CYCGRG	1 cut(s)	712
Bsp1286I	GDGCHC	4 cut(s)	257, 711, 745, 845
Bsp143I	GATC	4 cut(s)	189, 286, 537, 717
Bsp1720I	GCTNAGC	1 cut(s)	69
BspACI	CCGC	2 cut(s)	491, 704
BspANI	GGCC	2 cut(s)	39, 494
BspCNI	CTCAG	8 cut(s)	27, 61, 110, 145, 256, 303, 316, 330
BspPI	GGATC	3 cut(s)	197, 532, 725
BsrDI	GCAATG	1 cut(s)	892
BsrI	ACTGG	4 cut(s)	133, 174, 505, 663
BssECI	CCNNGG	5 cut(s)	508, 712, 713, 807, 808
BssMI	GATC	4 cut(s)	189, 286, 537, 717
Bst2UI	CCWGG	1 cut(s)	809
Bst4CI	ACNGT	2 cut(s)	624, 975
BstAPI	GCANNNNNTGC	2 cut(s)	32, 683
BstC8I	GCNNGC	1 cut(s)	37
BstDEI	CTNAG	9 cut(s)	14, 69, 97, 153, 264, 290, 324, 338, 990
BstF5I	GGATG	7 cut(s)	195, 241, 354, 504, 565, 782, 803
BstKTI	GATC	4 cut(s)	192, 289, 540, 720
BstMAI	GTCTC	2 cut(s)	2, 149
BstMBI	GATC	4 cut(s)	189, 286, 537, 717
BstMWI	GCNNNNNNNGC	3 cut(s)	32, 158, 683
BstNI	CCWGG	1 cut(s)	809
BstNSI	RCATGY	2 cut(s)	650, 828
BstSCI	CCNGG	4 cut(s)	198, 711, 712, 807
BstSLI	GKGCMC	1 cut(s)	711
BstV1I	GCAGC	1 cut(s)	233
BstV2I	GAAGAC	2 cut(s)	411, 731
BsuRI	GGCC	2 cut(s)	39, 494
BtsCI	GGATG	7 cut(s)	195, 241, 354, 504, 565, 782, 803
BtsI	GCAGTG	1 cut(s)	114
BtsIMutI	CAGTG	2 cut(s)	114, 126
Cac8I	GCNNGC	1 cut(s)	37
CaiI	CAGNNNCTG	2 cut(s)	318, 767
Cfr13I	GGNCC	2 cut(s)	38, 493
Cfr9I	CCCGGG	1 cut(s)	712
CseI	GACGC	1 cut(s)	685
Csp6I	GTAC	1 cut(s)	167
CviAII	CATG	2 cut(s)	647, 825
CviQI	GTAC	1 cut(s)	167
DdeI	CTNAG	9 cut(s)	14, 69, 97, 153, 264, 290, 324, 338, 990
DpnI	GATC	4 cut(s)	191, 288, 539, 719
DpnII	GATC	4 cut(s)	189, 286, 537, 717
Ecl136II	GAGCTC	1 cut(s)	743
Eco24I	GRGCYC	3 cut(s)	257, 745, 845
Eco53kI	GAGCTC	1 cut(s)	743
Eco57I	CTGAAG	4 cut(s)	246, 423, 692, 945
Eco88I	CYCGRG	1 cut(s)	712
EcoICRI	GAGCTC	1 cut(s)	743
EcoRII	CCWGG	1 cut(s)	807
EcoT38I	GRGCYC	3 cut(s)	257, 745, 845
FaeI	CATG	2 cut(s)	650, 828
FaqI	GGGAC	1 cut(s)	456
FatI	CATG	2 cut(s)	646, 824
FauNDI	CATATG	1 cut(s)	616
Fnu4HI	GCNGC	2 cut(s)	222, 492
FokI	GGATG	7 cut(s)	182, 248, 341, 491, 572, 769, 790
FriOI	GRGCYC	3 cut(s)	257, 745, 845
Fsp4HI	GCNGC	2 cut(s)	222, 492
FspBI	CTAG	1 cut(s)	908
GluI	GCNGC	2 cut(s)	222, 492
GsaI	CCCAGC	1 cut(s)	550
GsuI	CTGGAG	1 cut(s)	150
HaeIII	GGCC	2 cut(s)	39, 494
HapII	CCGG	3 cut(s)	200, 713, 729
HgaI	GACGC	1 cut(s)	685
Hin1II	CATG	2 cut(s)	650, 828
HincII	GTYRAC	1 cut(s)	310
HindII	GTYRAC	1 cut(s)	310
HindIII	AAGCTT	1 cut(s)	387
HinfI	GANTC	3 cut(s)	315, 764, 920
HpaII	CCGG	3 cut(s)	200, 713, 729
HphI	GGTGA	1 cut(s)	196
Hpy166II	GTNNAC	2 cut(s)	310, 709
Hpy188I	TCNGA	6 cut(s)	17, 325, 339, 403, 509, 925
Hpy188III	TCNNGA	3 cut(s)	83, 553, 721
Hpy8I	GTNNAC	2 cut(s)	310, 709
HpyAV	CCTTC	5 cut(s)	114, 211, 226, 667, 848
HpyCH4III	ACNGT	2 cut(s)	624, 975
HpyCH4IV	ACGT	1 cut(s)	137
HpyCH4V	TGCA	6 cut(s)	35, 620, 646, 709, 878, 885
HpyF10VI	GCNNNNNNNGC	3 cut(s)	32, 158, 683
HpyF3I	CTNAG	9 cut(s)	14, 69, 97, 153, 264, 290, 324, 338, 990
HpySE526I	ACGT	1 cut(s)	137
Hsp92II	CATG	2 cut(s)	650, 828
Kzo9I	GATC	4 cut(s)	189, 286, 537, 717
LmnI	GCTCC	3 cut(s)	131, 149, 812
Lsp1109I	GCAGC	1 cut(s)	233
LweI	GCATC	2 cut(s)	513, 791
MaeI	CTAG	1 cut(s)	908
MaeII	ACGT	1 cut(s)	137
MaeIII	GTNAC	2 cut(s)	789, 893
MalI	GATC	4 cut(s)	191, 288, 539, 719
MboI	GATC	4 cut(s)	189, 286, 537, 717
MboII	GAAGA	5 cut(s)	416, 522, 525, 736, 766
MfeI	CAATTG	1 cut(s)	578
MhlI	GDGCHC	4 cut(s)	257, 711, 745, 845
MluCI	AATT	7 cut(s)	30, 240, 411, 578, 595, 629, 732
MnlI	CCTC	9 cut(s)	106, 173, 180, 259, 333, 359, 368, 503, 549
MseI	TTAA	1 cut(s)	651
MspA1I	CMGCKG	3 cut(s)	224, 491, 546
MspI	CCGG	3 cut(s)	200, 713, 729
MspR9I	CCNGG	4 cut(s)	200, 713, 714, 809
MunI	CAATTG	1 cut(s)	578
MvaI	CCWGG	1 cut(s)	809
MwoI	GCNNNNNNNGC	3 cut(s)	32, 158, 683
NciI	CCSGG	3 cut(s)	200, 713, 714
NdeI	CATATG	1 cut(s)	616
NdeII	GATC	4 cut(s)	189, 286, 537, 717
NlaIII	CATG	2 cut(s)	650, 828
NmuCI	GTSAC	1 cut(s)	893
NspI	RCATGY	2 cut(s)	650, 828
PasI	CCCWGGG	1 cut(s)	808
PfeI	GAWTC	3 cut(s)	315, 764, 920
PkrI	GCNGC	2 cut(s)	223, 493
PsiI	TTATAA	3 cut(s)	272, 600, 737
Psp124BI	GAGCTC	1 cut(s)	745
Psp6I	CCWGG	1 cut(s)	807
PspFI	CCCAGC	1 cut(s)	546
PspGI	CCWGG	1 cut(s)	807
PspPI	GGNCC	2 cut(s)	38, 493
PstNI	CAGNNNCTG	2 cut(s)	318, 767
PvuII	CAGCTG	2 cut(s)	224, 546
RsaI	GTAC	1 cut(s)	168
RsaNI	GTAC	1 cut(s)	167
SacI	GAGCTC	1 cut(s)	745
SaqAI	TTAA	1 cut(s)	651
SatI	GCNGC	2 cut(s)	222, 492
Sau3AI	GATC	4 cut(s)	189, 286, 537, 717
Sau96I	GGNCC	2 cut(s)	38, 493
ScaI	AGTACT	1 cut(s)	168
ScrFI	CCNGG	4 cut(s)	200, 713, 714, 809
SduI	GDGCHC	4 cut(s)	257, 711, 745, 845
SfaNI	GCATC	2 cut(s)	513, 791
SmaI	CCCGGG	1 cut(s)	714
SmlI	CTYRAG	2 cut(s)	81, 384
SmoI	CTYRAG	2 cut(s)	81, 384
Sse9I	AATT	7 cut(s)	30, 240, 411, 578, 595, 629, 732
SsiI	CCGC	2 cut(s)	491, 704
SspI	AATATT	1 cut(s)	276
SspMI	CTAG	1 cut(s)	908
SstI	GAGCTC	1 cut(s)	745
StyD4I	CCNGG	4 cut(s)	198, 711, 712, 807
TaaI	ACNGT	2 cut(s)	624, 975
TaiI	ACGT	1 cut(s)	140
TaqI	TCGA	2 cut(s)	818, 902
TasI	AATT	7 cut(s)	30, 240, 411, 578, 595, 629, 732
TatI	WGTACW	1 cut(s)	166
TauI	GCSGC	1 cut(s)	494
TfiI	GAWTC	3 cut(s)	315, 764, 920
Tru1I	TTAA	1 cut(s)	651
Tru9I	TTAA	1 cut(s)	651
TscAI	CASTG	2 cut(s)	121, 133
TseFI	GTSAC	1 cut(s)	893
TseI	GCWGC	1 cut(s)	221
Tsp45I	GTSAC	1 cut(s)	893
TspDTI	ATGAA	5 cut(s)	17, 252, 745, 766, 933
TspMI	CCCGGG	1 cut(s)	712
TspRI	CASTG	2 cut(s)	121, 133
VneI	GTGCAC	1 cut(s)	707
XapI	RAATTY	1 cut(s)	240
XceI	RCATGY	2 cut(s)	650, 828
XmaI	CCCGGG	1 cut(s)	712
XspI	CTAG	1 cut(s)	908
ZrmI	AGTACT	1 cut(s)	168

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.