Prupe.5G171800_v2.0.a1

DUF4206

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Forward (+)
14663077 .. 14669010
5934 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G171800.1

Sequence Viewer

Length: 3381 bp
ATGATCAATGGAGAGACGACTGCCGAGGCCGCCTCTCCCGATCCGTCCCTTTCTTTCGATCGCAAATCGGACGGTGACGGTGGCGATGCCTCGCCCCGATCGCCTCCGTCGCGGTACTCGTCGTTCGGCGAGTCCGAGTACGAGCGCTATTGTAGCGCCAACTCGGTTATGGGCACGCCGAGCATGTGCAGCACAATCACAGTATTCAATGATTTTCCGGAGCCCGAATTCGGGTCGCTAAGAAGTTCGGGTTTTGTGGACGAGAGTGGTGGTTTGGATAATTTTAGTTTGGGAGGGAGGATTGAGAGAAATCGAGAGGATCGGAGAGTTTCAGGTAGTGATAGGATTGAGTTTTGTAAGGAGGATGATAGTATTGAATGTCGGCGGAATACGAACTATGGGTCTAGTGGGTTGGAATTGTATGGCAATGAGGATGCTCATGGAGTTGATGGTTTAGATGAATTGATGTCTTGGAAGCTTGAGAGTGGATCGTCGGTTTTAAGGGGGGGTTCACAATTGAAGTATGGTTCGGATAATAGTGATGAAGACAGTGAAAAGGGCATGGAAGTGCAGAGAGGAGTTGCAGGAAAAGGGAAAGATAGTGCTGAATTTGAACGTGTGGTGGCCCGAGAGACTAATGATTCGAATTGGGTTGGAACTAGTTCCCAATTTGTACCCAGGGTTGAAGAGTTTGATGGGGTAAAAATGGAGTTCTGTACTTCGGAATTTGATGGAAGAGCGATTGATAGGGAAGAAGGAACCTCATCTAGAAATGAGTACTCAGAGGATGAGGGGTCTATGTATGGTTCAGATGATGAGAAGAGTGGCTTTAGTCAACAGAGGAATGTGCACTATCATCAGCAAGCAAAACCAGAGAATGAAAATCCGTTTCTTATCAACTCATCTGTAGCCTTTGGTTCGGATGATTGGGATGATTTTGTGCAAGAAAGCCATGGAAGTAATATAGCTTCTTTAGCTAGGAATGTGTTCCGGCACCAGATAGAACAGAAGGTTGAAACTGAAAGGAAAGTTTCAAATTCCACTTCCCTCGCTTCAGTCGAGCGTCAGAGTACATGTCAGACTGAGCAGGGAAAATATGTGACAAACGTGCCCACAGAAAGCCAACTAGTTCAGGCTGATAAGAAATTGGCAGAAAATGTTAATAGTTCCATGGTCCCTGCTAGTTCTCCAAATATTATTGAAACAGAAAGAGTAGAAGATGTGAGGGACATTCCTGTGGCCAGTTATCAAGTCCAAGCTATTGATGATCCGATTGAATTTACCGAAAGTTCTTTTACAACCCCAACTAGTTTTCAAAATGTTCAAGAACCAGAGCAAGAAGGTTCAAGAGACATTCCTTTGACCAAGAATCAAAATCCAGGTCCTGACGAAGCAGCAAAAGAAAGTCCTGATGAAAATGGTTTAAACATTATGGATGATGGCATTTCTAATGCACATACATGTGTGAATGCTGGGGATGTCATTGGGATTGATGATGGTCAAGATTTAGAAAACAAAAATTTGGGGAATCTAAAAGTTAAACCGAATCCCCTTTCTGATATATCAACTAATCAGCTTAGCATCTATGCAACCAGACCTCCTGGAAATATGAAGGGGGAATTCCTTGTAGACGATAAGCCAAGCATGCCGACATCAATTTTTGAAAATAAAATGAGGGAAAGTTCTGCTTCAGAAGATCTCTTTGAAAACTATCCTAAGCCCGTTAAGACAGATAATTTTGAGCTAAATGAATTCTACGATGAGGTTGTTAATGAGATGGAAGAAATTCTGCTCGACTCTGCTGAGTCCCCAGGGGCAAGGTTCGCTCATGGTAACAGGATTTTACAGTCACAGCAATCTCTACCGTTAAGAGATGGTGGATCGACTGCTTCTACTTCTGGCACAGATGATGCTTACTTGTTCAATCAGAATTCATTGAGAATTGATGGGGTCGAAGTGGTAGGTGCAAGGCAGAGGAAGGGAGATGTCTCATTCAGTGAAAGACTGGTGGGAGTGAAGGAATATACTGTGTATATAATAAAAGTGTGGAGTGGCAAGGATCAATGGGAGGTTGAACGTCGATATCGTGATTTCTATACACTCTATCGTCGATTGAAAACATTGTTTGCTGACCATGGCTGGAATCTACCTTCTCCCTGGTCTTCTGTAGAAAAGGAATCCAGAAAGATTTTTGGAAATGCATCTCCTGATGTTGTTGCAGAGAGAAGTGTTCTCATTCAAGAGTGTCTGCAATCCATTCTCCATTACAGGTTCTTTTCCAGTCCACCGAGTGCATTAATATGGTTTTTGTCTCCTCAAGATTCATTTCCTAGCTCCATGGCATCAAATATGGCCGACTCTAATACTAAAAGGGCATACACTGAAAACTTTTCCACTTTAGGAAAGACCATATCACTTATTGTTGAAATTCGACAATACAAATCTTTGAAGCAGATGCTAGAAGCACAACATTATACTTGTGCTGGATGTCACAAGCATTTTGATGATGGAAAGACTTTGATACGGGATTTTGCACAGACATTTGGATGGGGCAAGCCTCGACTTTGTGAATATACTGGTCAATTATTTTGCTCGTCGTGCCATACAAATGAAATTGCAATCATACCAGCAAGGGTGTTGCATAACTGGGACTTTACTCAGTATCCAGTTTCGCAGTTGGCTAAATCTTATCTGGATTCCATACATGACCAGCCCATGCTTTGTGTCAGTGCTGTTAATCCATTCCTTTTCTCAAAGGTCCCAGCCTTGCTTCATGTTATGGGTGTCAGGAAGAAAATTGGCACCATGCTTCCTTATGTTCGTTGTCCATTCCGGAGGTCAATCAACAAAGGACTTGGGTCTCGGAGATATCTTCTAGAAAGCAATGATTTTTTTGCACTGAGAGACCTCATTGATCTTTCAAAAGGAGCCTTTGCAGTGCTCCCTGTGATAGTTGAAACTGTCTCAAGGAAAATTCTGGGCCACATAACTGAGCAGTGTCTCATATGCTGTGATGTGGGAGTCCCCTGTGGTGCACGACAAGCATGCAATGACCCTTCATCTCTCATTTTCCCTTTTCAGGAGGATGAGATTGAAAGGTGTCCATCTTGTGAATCAGTATTCCACAAGCATTGCTTCAGAAAGCTCATGGACTGCATGTGCGGGGCACACCTTAGGGTGGACGAGCCGGCACAACTCATTAAGAGGGCAACCTCTGGGGTTGGTGCTGAGATCAGTGGGCTTCTAGACTTGTTTGGAGGAGGGTCGAGTTCTGGATTACTCTCTGGCATATTTTCGAAGGTGAAGCCAGAGAAGCCAAGGGAGCATAAAGACGGTGACAATGTGATTTTAATGGGTTCTTTCCCCAGCACTTCCTTATAA

Protein Analysis

1127

Amino Acids

125.16

Weight (kDa)

4.9

Isoelectric Point (pI)

51.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010875)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3379
AccB1I GGYRCC 2 cut(s) 993, 2801
AccI GTMKAC 1 cut(s) 1629
AccII CGCG 1 cut(s) 112
AccIII TCCGGA 2 cut(s) 217, 2832
AciI CCGC 4 cut(s) 30, 112, 385, 3162
AclWI GGATC 6 cut(s) 35, 327, 496, 1262, 1888, 2067
AcoI YGGCCR 2 cut(s) 1239, 2352
AcuI CTGAAG 3 cut(s) 1038, 1674, 3121
AdeI CACNNNGTG 1 cut(s) 2291
AfaI GTAC 6 cut(s) 116, 140, 675, 718, 779, 1072
AfeI AGCGCT 1 cut(s) 146
AfiI CCNNNNNNNGG 4 cut(s) 230, 231, 3079, 3178
AflIII ACRYGT 3 cut(s) 616, 1073, 1460
AhlI ACTAGT 3 cut(s) 659, 1126, 1307
AjnI CCWGG 5 cut(s) 677, 1378, 1600, 1810, 2156
AluBI AGCT 8 cut(s) 478, 968, 977, 1259, 1576, 1744, 2334, 3145
AluI AGCT 8 cut(s) 478, 968, 977, 1259, 1576, 1744, 2334, 3145
Alw21I GWGCWC 3 cut(s) 852, 2943, 3037
Alw26I GTCTC 9 cut(s) 8, 626, 1344, 1993, 2316, 2865, 2898, 2968, 3005
Alw44I GTGCAC 2 cut(s) 848, 3033
AlwI GGATC 6 cut(s) 35, 327, 496, 1262, 1888, 2067
AlwNI CAGNNNCTG 1 cut(s) 1385
Ama87I CYCGRG 1 cut(s) 627
Aor13HI TCCGGA 2 cut(s) 217, 2832
Aor51HI AGCGCT 1 cut(s) 146
AoxI GGCC 5 cut(s) 27, 624, 1239, 2352, 2980
ApaLI GTGCAC 2 cut(s) 848, 3033
ApeKI GCWGC 2 cut(s) 189, 1394
ArsI GACNNNNNNTTYG 6 cut(s) 386, 418, 625, 657, 1366, 1398
AseI ATTAAT 1 cut(s) 2297
Asp700I GAANNNNTTC 3 cut(s) 661, 986, 1785
AspLEI GCGC 2 cut(s) 147, 158
AspS9I GGNCC 5 cut(s) 625, 1174, 1382, 2758, 2980
AsuHPI GGTGA 3 cut(s) 86, 3313, 3347
AsuII TTCGAA 2 cut(s) 644, 3296
AvaI CYCGRG 1 cut(s) 627
AvaII GGWCC 3 cut(s) 1174, 1382, 2758
AxyI CCTNAGG 1 cut(s) 3173
BaeGI GKGCMC 5 cut(s) 176, 852, 1113, 3037, 3169
BalI TGGCCA 1 cut(s) 1241
BanI GGYRCC 2 cut(s) 993, 2801
BanII GRGCYC 1 cut(s) 225
BarI GAAGNNNNNNTAC 2 cut(s) 952, 984
BbsI GAAGAC 2 cut(s) 552, 2154
Bbv12I GWGCWC 3 cut(s) 852, 2943, 3037
BbvI GCAGC 2 cut(s) 201, 1406
BcgI CGANNNNNNTGC 2 cut(s) 3027, 3061
BciT130I CCWGG 5 cut(s) 679, 1380, 1602, 1812, 2158
BciVI GTATCC 1 cut(s) 2673
BclI TGATCA 1 cut(s) 3
BcoDI GTCTC 9 cut(s) 8, 626, 1344, 1993, 2316, 2865, 2898, 2968, 3005
BcuI ACTAGT 3 cut(s) 659, 1126, 1307
BfmI CTRYAG 2 cut(s) 906, 2166
BfoI RGCGCY 2 cut(s) 148, 159
BfuI GTATCC 1 cut(s) 2673
BglII AGATCT 1 cut(s) 1696
BisI GCNGC 3 cut(s) 30, 190, 1395
BlpI GCTNAGC 1 cut(s) 1577
BlsI GCNGC 3 cut(s) 31, 191, 1396
BmcAI AGTACT 1 cut(s) 779
Bme1390I CCNGG 5 cut(s) 679, 1380, 1602, 1812, 2158
Bme18I GGWCC 3 cut(s) 1174, 1382, 2758
BmeT110I CYCGRG 1 cut(s) 627
BmgT120I GGNCC 5 cut(s) 625, 1174, 1382, 2758, 2980
BmiI GGNNCC 7 cut(s) 222, 760, 995, 1176, 2760, 2803, 2929
BmrFI CCNGG 5 cut(s) 679, 1380, 1602, 1812, 2158
BmrI ACTGGG 1 cut(s) 2656
BmsI GCATC 7 cut(s) 76, 424, 1590, 1900, 2210, 2351, 2445
BmuI ACTGGG 1 cut(s) 2656
BoxI GACNNNNGTC 1 cut(s) 2857
BpiI GAAGAC 2 cut(s) 552, 2154
BplI GAGNNNNNCTC 2 cut(s) 17, 49
Bpu10I CCTNAGC 1 cut(s) 1716
Bpu1102I GCTNAGC 1 cut(s) 1577
Bpu14I TTCGAA 2 cut(s) 644, 3296
BpuEI CTTGAG 3 cut(s) 500, 2301, 2950
BsaI GGTCTC 2 cut(s) 2865, 2898
BsaWI WCCGGW 2 cut(s) 217, 2832
BsaXI ACNNNNNCTCC 2 cut(s) 1582, 1612
Bsc4I CCNNNNNNNGG 4 cut(s) 230, 231, 3079, 3178
Bse118I RCCGGY 1 cut(s) 3187
Bse1I ACTGG 6 cut(s) 1242, 2010, 2280, 2581, 2651, 2666
Bse21I CCTNAGG 1 cut(s) 3173
Bse3DI GCAATG 4 cut(s) 433, 2890, 3055, 3130
BseAI TCCGGA 2 cut(s) 217, 2832
BseBI CCWGG 5 cut(s) 679, 1380, 1602, 1812, 2158
BseLI CCNNNNNNNGG 4 cut(s) 230, 231, 3079, 3178
BseMI GCAATG 4 cut(s) 433, 2890, 3055, 3130
BseMII CTCAG 7 cut(s) 795, 1074, 1794, 2672, 2891, 2982, 3219
BseNI ACTGG 6 cut(s) 1242, 2010, 2280, 2581, 2651, 2666
BseRI GAGGAG 3 cut(s) 591, 2304, 3273
BseSI GKGCMC 5 cut(s) 176, 852, 1113, 3037, 3169
BseXI GCAGC 2 cut(s) 201, 1406
BseYI CCCAGC 3 cut(s) 1472, 2761, 3365
BsgI GTGCAG 2 cut(s) 208, 590
Bsh1236I CGCG 1 cut(s) 112
Bsh1285I CGRYCG 2 cut(s) 61, 101
BshFI GGCC 5 cut(s) 29, 626, 1241, 2354, 2982
BshNI GGYRCC 2 cut(s) 993, 2801
BsiEI CGRYCG 2 cut(s) 61, 101
BsiHKAI GWGCWC 3 cut(s) 852, 2943, 3037
BsiHKCI CYCGRG 1 cut(s) 627
BsiSI CCGG 4 cut(s) 218, 991, 2833, 3188
BslFI GGGAC 7 cut(s) 31, 1160, 1241, 1792, 2663, 2744, 3008
BslI CCNNNNNNNGG 4 cut(s) 230, 231, 3079, 3178
BsmAI GTCTC 9 cut(s) 8, 626, 1344, 1993, 2316, 2865, 2898, 2968, 3005
BsmBI CGTCTC 1 cut(s) 8
BsmFI GGGAC 7 cut(s) 31, 1160, 1241, 1792, 2663, 2744, 3008
BsmI GAATGC 1 cut(s) 1474
BsnI GGCC 5 cut(s) 29, 626, 1241, 2354, 2982
Bso31I GGTCTC 2 cut(s) 2865, 2898
BsoBI CYCGRG 1 cut(s) 627
Bsp119I TTCGAA 2 cut(s) 644, 3296
Bsp1286I GDGCHC 7 cut(s) 176, 225, 852, 1113, 2943, 3037, 3169
Bsp13I TCCGGA 2 cut(s) 217, 2832
Bsp1720I GCTNAGC 1 cut(s) 1577
Bsp19I CCATGG 4 cut(s) 952, 1170, 2134, 2337
BspACI CCGC 4 cut(s) 30, 112, 385, 3162
BspANI GGCC 5 cut(s) 29, 626, 1241, 2354, 2982
BspCNI CTCAG 7 cut(s) 794, 1075, 1795, 2671, 2892, 2983, 3220
BspEI TCCGGA 2 cut(s) 217, 2832
BspFNI CGCG 1 cut(s) 112
BspLI GGNNCC 7 cut(s) 222, 760, 995, 1176, 2760, 2803, 2929
BspPI GGATC 6 cut(s) 35, 327, 496, 1262, 1888, 2067
BspQI GCTCTTC 1 cut(s) 730
BspT104I TTCGAA 2 cut(s) 644, 3296
BspT107I GGYRCC 2 cut(s) 993, 2801
BspTNI GGTCTC 2 cut(s) 2865, 2898
BsrDI GCAATG 4 cut(s) 433, 2890, 3055, 3130
BsrFI RCCGGY 1 cut(s) 3187
BsrI ACTGG 6 cut(s) 1242, 2010, 2280, 2581, 2651, 2666
BssAI RCCGGY 1 cut(s) 3187
BssT1I CCWWGG 5 cut(s) 952, 1170, 2134, 2337, 3317
Bst2UI CCWGG 5 cut(s) 679, 1380, 1602, 1812, 2158
Bst4CI ACNGT 9 cut(s) 74, 80, 202, 551, 1848, 1866, 2029, 2962, 3335
Bst6I CTCTTC 3 cut(s) 681, 730, 815
BstBI TTCGAA 2 cut(s) 644, 3296
BstC8I GCNNGC 6 cut(s) 176, 864, 1646, 2555, 3046, 3189
BstDSI CCRYGG 4 cut(s) 952, 1170, 2134, 2337
BstFNI CGCG 1 cut(s) 112
BstH2I RGCGCY 2 cut(s) 148, 159
BstHHI GCGC 2 cut(s) 147, 158
BstMAI GTCTC 9 cut(s) 8, 626, 1344, 1993, 2316, 2865, 2898, 2968, 3005
BstMCI CGRYCG 2 cut(s) 61, 101
BstNI CCWGG 5 cut(s) 679, 1380, 1602, 1812, 2158
BstNSI RCATGY 6 cut(s) 187, 1077, 1464, 1648, 3048, 3160
BstPAI GACNNNNGTC 1 cut(s) 2857
BstSCI CCNGG 5 cut(s) 677, 1378, 1600, 1810, 2156
BstSFI CTRYAG 2 cut(s) 906, 2166
BstSLI GKGCMC 5 cut(s) 176, 852, 1113, 3037, 3169
BstUI CGCG 1 cut(s) 112
BstV1I GCAGC 2 cut(s) 201, 1406
BstV2I GAAGAC 2 cut(s) 552, 2154
BstX2I RGATCY 1 cut(s) 1696
BstYI RGATCY 1 cut(s) 1696
Bsu36I CCTNAGG 1 cut(s) 3173
BsuI GTATCC 1 cut(s) 2673
BsuRI GGCC 5 cut(s) 29, 626, 1241, 2354, 2982
BtgI CCRYGG 4 cut(s) 952, 1170, 2134, 2337
BtgZI GCGATG 1 cut(s) 99
BtsI GCAGTG 2 cut(s) 2943, 3002
BtsIMutI CAGTG 8 cut(s) 556, 2002, 2379, 2734, 2897, 2943, 3002, 3241
Cac8I GCNNGC 6 cut(s) 176, 864, 1646, 2555, 3046, 3189
CaiI CAGNNNCTG 1 cut(s) 1385
CfoI GCGC 2 cut(s) 147, 158
Cfr10I RCCGGY 1 cut(s) 3187
Cfr13I GGNCC 5 cut(s) 625, 1174, 1382, 2758, 2980
CseI GACGC 1 cut(s) 1052
Csp6I GTAC 6 cut(s) 115, 139, 674, 717, 778, 1071
CspCI CAANNNNNGTGG 2 cut(s) 3113, 3148
CviQI GTAC 6 cut(s) 115, 139, 674, 717, 778, 1071
DraI TTTAAA 1 cut(s) 1425
DraIII CACNNNGTG 1 cut(s) 2291
EaeI YGGCCR 2 cut(s) 1239, 2352
Eam1104I CTCTTC 3 cut(s) 681, 730, 815
EarI CTCTTC 3 cut(s) 681, 730, 815
EciI GGCGGA 1 cut(s) 400
Eco130I CCWWGG 5 cut(s) 952, 1170, 2134, 2337, 3317
Eco24I GRGCYC 1 cut(s) 225
Eco31I GGTCTC 2 cut(s) 2865, 2898
Eco32I GATATC 2 cut(s) 2084, 2870
Eco47I GGWCC 3 cut(s) 1174, 1382, 2758
Eco47III AGCGCT 1 cut(s) 146
Eco57I CTGAAG 3 cut(s) 1038, 1674, 3121
Eco81I CCTNAGG 1 cut(s) 3173
Eco88I CYCGRG 1 cut(s) 627
EcoO109I RGGNCCY 2 cut(s) 1382, 2758
EcoRI GAATTC 4 cut(s) 227, 1619, 1751, 1930
EcoRII CCWGG 5 cut(s) 677, 1378, 1600, 1810, 2156
EcoRV GATATC 2 cut(s) 2084, 2870
EcoT14I CCWWGG 5 cut(s) 952, 1170, 2134, 2337, 3317
EcoT22I ATGCAT 1 cut(s) 2203
EcoT38I GRGCYC 1 cut(s) 225
ErhI CCWWGG 5 cut(s) 952, 1170, 2134, 2337, 3317
Esp3I CGTCTC 1 cut(s) 8
FalI AAGNNNNNCTT 6 cut(s) 812, 844, 1672, 1704, 3119, 3151
FaqI GGGAC 7 cut(s) 31, 1160, 1241, 1792, 2663, 2744, 3008
FauI CCCGC 1 cut(s) 3155
FauNDI CATATG 1 cut(s) 3005
FbaI TGATCA 1 cut(s) 3
FblI GTMKAC 1 cut(s) 1629
Fnu4HI GCNGC 3 cut(s) 30, 190, 1395
FriOI GRGCYC 1 cut(s) 225
Fsp4HI GCNGC 3 cut(s) 30, 190, 1395
GlaI GCGC 2 cut(s) 146, 157
GluI GCNGC 3 cut(s) 30, 190, 1395
GsaI CCCAGC 3 cut(s) 1476, 2765, 3369
HaeII RGCGCY 2 cut(s) 148, 159
HaeIII GGCC 5 cut(s) 29, 626, 1241, 2354, 2982
HapII CCGG 4 cut(s) 218, 991, 2833, 3188
HgaI GACGC 1 cut(s) 1052
HhaI GCGC 2 cut(s) 147, 158
Hin6I GCGC 2 cut(s) 145, 156
HinP1I GCGC 2 cut(s) 145, 156
HincII GTYRAC 1 cut(s) 836
HindII GTYRAC 1 cut(s) 836
HindIII AAGCTT 1 cut(s) 476
HpaII CCGG 4 cut(s) 218, 991, 2833, 3188
HphI GGTGA 3 cut(s) 86, 3313, 3347
Hpy166II GTNNAC 8 cut(s) 259, 512, 836, 850, 1630, 2285, 3035, 3181
Hpy8I GTNNAC 8 cut(s) 259, 512, 836, 850, 1630, 2285, 3035, 3181
Hpy99I CGWCG 6 cut(s) 112, 124, 496, 2082, 2112, 2599
HpyAV CCTTC 9 cut(s) 749, 1003, 1334, 1606, 1972, 2011, 2160, 3066, 3292
HpyCH4III ACNGT 9 cut(s) 74, 80, 202, 551, 1848, 1866, 2029, 2962, 3335
HpyCH4IV ACGT 3 cut(s) 616, 1107, 2077
HpySE526I ACGT 3 cut(s) 616, 1107, 2077
HspAI GCGC 2 cut(s) 145, 156
Kpn2I TCCGGA 2 cut(s) 217, 2832
KroI GCCGGC 1 cut(s) 3187
KroNI GCCGGC 1 cut(s) 3189
Ksp22I TGATCA 1 cut(s) 3
LguI GCTCTTC 1 cut(s) 730
LmnI GCTCC 5 cut(s) 220, 2339, 2927, 2946, 3322
Lsp1109I GCAGC 2 cut(s) 201, 1406
LweI GCATC 7 cut(s) 76, 424, 1590, 1900, 2210, 2351, 2445
MaeII ACGT 3 cut(s) 616, 1107, 2077
MaeIII GTNAC 6 cut(s) 74, 1099, 1832, 1848, 2489, 3335
MfeI CAATTG 1 cut(s) 515
MflI RGATCY 1 cut(s) 1696
MhlI GDGCHC 7 cut(s) 176, 225, 852, 1113, 2943, 3037, 3169
MlsI TGGCCA 1 cut(s) 1241
MluNI TGGCCA 1 cut(s) 1241
MlyI GAGTC 5 cut(s) 140, 1790, 1814, 2351, 3030
MmeI TCCRAC 2 cut(s) 393, 634
Mox20I TGGCCA 1 cut(s) 1241
Mph1103I ATGCAT 1 cut(s) 2203
MroI TCCGGA 2 cut(s) 217, 2832
MroNI GCCGGC 1 cut(s) 3187
MroXI GAANNNNTTC 3 cut(s) 661, 986, 1785
MscI TGGCCA 1 cut(s) 1241
MslI CAYNNNNRTG 8 cut(s) 566, 1235, 1459, 1461, 2299, 2502, 2545, 2607
Msp20I TGGCCA 1 cut(s) 1241
MspI CCGG 4 cut(s) 218, 991, 2833, 3188
MspR9I CCNGG 5 cut(s) 679, 1380, 1602, 1812, 2158
MssI GTTTAAAC 1 cut(s) 1425
MunI CAATTG 1 cut(s) 515
Mva1269I GAATGC 1 cut(s) 1474
MvaI CCWGG 5 cut(s) 679, 1380, 1602, 1812, 2158
MvnI CGCG 1 cut(s) 112
NaeI GCCGGC 1 cut(s) 3189
NcoI CCATGG 4 cut(s) 952, 1170, 2134, 2337
NdeI CATATG 1 cut(s) 3005
NgoMIV GCCGGC 1 cut(s) 3187
NlaIV GGNNCC 7 cut(s) 222, 760, 995, 1176, 2760, 2803, 2929
NmeAIII GCCGAG 2 cut(s) 49, 204
NmuCI GTSAC 5 cut(s) 74, 1099, 1848, 2489, 3335
NsiI ATGCAT 1 cut(s) 2203
NspI RCATGY 6 cut(s) 187, 1077, 1464, 1648, 3048, 3160
NspV TTCGAA 2 cut(s) 644, 3296
PaeI GCATGC 2 cut(s) 1648, 3048
PasI CCCWGGG 2 cut(s) 678, 1811
PciI ACATGT 2 cut(s) 1073, 1460
PciSI GCTCTTC 1 cut(s) 730
PcsI WCGNNNNNNNCGW 4 cut(s) 116, 132, 1056, 2083
PctI GAATGC 1 cut(s) 1474
PdiI GCCGGC 1 cut(s) 3189
PdmI GAANNNNTTC 3 cut(s) 661, 986, 1785
PfeI GAWTC 9 cut(s) 641, 1369, 1528, 1546, 2143, 2177, 2321, 2696, 3113
PfoI TCCNGGA 1 cut(s) 1600
PkrI GCNGC 3 cut(s) 31, 191, 1396
Ple19I CGATCG 2 cut(s) 61, 101
PleI GAGTC 5 cut(s) 139, 1790, 1813, 2351, 3029
PmeI GTTTAAAC 1 cut(s) 1425
PpsI GAGTC 5 cut(s) 139, 1790, 1813, 2351, 3029
PpuMI RGGWCCY 2 cut(s) 1382, 2758
PscI ACATGT 2 cut(s) 1073, 1460
PshAI GACNNNNGTC 1 cut(s) 2857
PshBI ATTAAT 1 cut(s) 2297
PsiI TTATAA 1 cut(s) 3379
Psp5II RGGWCCY 2 cut(s) 1382, 2758
Psp6I CCWGG 5 cut(s) 677, 1378, 1600, 1810, 2156
PspFI CCCAGC 3 cut(s) 1472, 2761, 3365
PspGI CCWGG 5 cut(s) 677, 1378, 1600, 1810, 2156
PspN4I GGNNCC 7 cut(s) 222, 760, 995, 1176, 2760, 2803, 2929
PspPI GGNCC 5 cut(s) 625, 1174, 1382, 2758, 2980
PspPPI RGGWCCY 2 cut(s) 1382, 2758
PsrI GAACNNNNNNTAC 2 cut(s) 107, 139
PstNI CAGNNNCTG 1 cut(s) 1385
PsuI RGATCY 1 cut(s) 1696
PvuI CGATCG 2 cut(s) 61, 101
RsaI GTAC 6 cut(s) 116, 140, 675, 718, 779, 1072
RsaNI GTAC 6 cut(s) 115, 139, 674, 717, 778, 1071
RseI CAYNNNNRTG 8 cut(s) 566, 1235, 1459, 1461, 2299, 2502, 2545, 2607
SapI GCTCTTC 1 cut(s) 730
SatI GCNGC 3 cut(s) 30, 190, 1395
Sau96I GGNCC 5 cut(s) 625, 1174, 1382, 2758, 2980
ScaI AGTACT 1 cut(s) 779
SchI GAGTC 5 cut(s) 140, 1790, 1814, 2351, 3030
ScrFI CCNGG 5 cut(s) 679, 1380, 1602, 1812, 2158
SduI GDGCHC 7 cut(s) 176, 225, 852, 1113, 2943, 3037, 3169
SfaNI GCATC 7 cut(s) 76, 424, 1590, 1900, 2210, 2351, 2445
SfcI CTRYAG 2 cut(s) 906, 2166
SfuI TTCGAA 2 cut(s) 644, 3296
SinI GGWCC 3 cut(s) 1174, 1382, 2758
SmiMI CAYNNNNRTG 8 cut(s) 566, 1235, 1459, 1461, 2299, 2502, 2545, 2607
SmlI CTYRAG 3 cut(s) 479, 2316, 2965
SmoI CTYRAG 3 cut(s) 479, 2316, 2965
SpeI ACTAGT 3 cut(s) 659, 1126, 1307
SphI GCATGC 2 cut(s) 1648, 3048
SsiI CCGC 4 cut(s) 30, 112, 385, 3162
SspI AATATT 1 cut(s) 1195
StyD4I CCNGG 5 cut(s) 677, 1378, 1600, 1810, 2156
StyI CCWWGG 5 cut(s) 952, 1170, 2134, 2337, 3317
TaaI ACNGT 9 cut(s) 74, 80, 202, 551, 1848, 1866, 2029, 2962, 3335
TaiI ACGT 3 cut(s) 619, 1110, 2080
TatI WGTACW 3 cut(s) 716, 777, 1070
TauI GCSGC 1 cut(s) 32
TfiI GAWTC 9 cut(s) 641, 1369, 1528, 1546, 2143, 2177, 2321, 2696, 3113
TscAI CASTG 8 cut(s) 556, 2002, 2386, 2734, 2904, 2943, 3002, 3241
TseFI GTSAC 5 cut(s) 74, 1099, 1848, 2489, 3335
TseI GCWGC 2 cut(s) 189, 1394
Tsp45I GTSAC 5 cut(s) 74, 1099, 1848, 2489, 3335
TspGWI ACGGA 3 cut(s) 33, 96, 876
TspRI CASTG 8 cut(s) 556, 2002, 2386, 2734, 2904, 2943, 3002, 3241
VneI GTGCAC 2 cut(s) 848, 3033
VpaK11BI GGWCC 3 cut(s) 1174, 1382, 2758
VspI ATTAAT 1 cut(s) 2297
XbaI TCTAGA 3 cut(s) 767, 2875, 3244
XceI RCATGY 6 cut(s) 187, 1077, 1464, 1648, 3048, 3160
XcmI CCANNNNNNNNNTGG 1 cut(s) 166
XmiI GTMKAC 1 cut(s) 1629
XmnI GAANNNNTTC 3 cut(s) 661, 986, 1785
ZrmI AGTACT 1 cut(s) 779
Zsp2I ATGCAT 1 cut(s) 2203
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.