DUF4206
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G48195 |
| fragaria_vesca | FvH4_5g05470 FvH4_5g05470 FvH4_5g05470 |
| malus_domestica | MD06G1172500.v1.1 MD14G1178400.v1.1 |
| prunus_persica | Prupe.5G171800_v2.0.a1 Prupe.5G171800_v2.0.a1 |
| pyrus_communis | pycom06g15360 pycom14g14870 |
| rosa_chinensis | RchiOBHm_Chr7g0193371 |
| rosa_laevigata | RLG00000004275 |
| rosa_multiflora | Rmu_co8475531.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00262170 |
| rosa_rugosa | Rorug07G0009200 |
| rosa_samantha | Rh7AG135500 Rh7BG135800 Rh7CG139200 Rh7DG137200 |
| rosa_wichuraiana | Rw7G011550 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 28 |
| AccII | CGCG | 2 cut(s) | 209, 1630 |
| AccIII | TCCGGA | 1 cut(s) | 193 |
| AciI | CCGC | 2 cut(s) | 243, 470 |
| AclI | AACGTT | 1 cut(s) | 1090 |
| AclWI | GGATC | 4 cut(s) | 29, 309, 582, 1295 |
| AcoI | YGGCCR | 1 cut(s) | 1164 |
| AcsI | RAATTY | 6 cut(s) | 829, 967, 1117, 1202, 1501, 1601 |
| AcyI | GRCGYC | 2 cut(s) | 74, 352 |
| AfaI | GTAC | 7 cut(s) | 92, 116, 361, 716, 727, 776, 997 |
| AfeI | AGCGCT | 1 cut(s) | 122 |
| AflII | CTTAAG | 1 cut(s) | 1709 |
| AflIII | ACRYGT | 3 cut(s) | 998, 1051, 1445 |
| AjnI | CCWGG | 3 cut(s) | 921, 1303, 1582 |
| AluBI | AGCT | 9 cut(s) | 454, 613, 899, 1061, 1106, 1184, 1337, 1369, 1391 |
| AluI | AGCT | 9 cut(s) | 454, 613, 899, 1061, 1106, 1184, 1337, 1369, 1391 |
| Alw26I | GTCTC | 4 cut(s) | 8, 301, 573, 1116 |
| AlwI | GGATC | 4 cut(s) | 29, 309, 582, 1295 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1310 |
| Ama87I | CYCGRG | 1 cut(s) | 1394 |
| Aor13HI | TCCGGA | 1 cut(s) | 193 |
| Aor51HI | AGCGCT | 1 cut(s) | 122 |
| AoxI | GGCC | 2 cut(s) | 1164, 1306 |
| ApeKI | GCWGC | 1 cut(s) | 129 |
| ApoI | RAATTY | 6 cut(s) | 829, 967, 1117, 1202, 1501, 1601 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 604 |
| AspLEI | GCGC | 2 cut(s) | 123, 134 |
| AspS9I | GGNCC | 6 cut(s) | 467, 617, 708, 1307, 1528, 1577 |
| AsuC2I | CCSGG | 2 cut(s) | 357, 474 |
| AsuHPI | GGTGA | 1 cut(s) | 437 |
| AsuII | TTCGAA | 1 cut(s) | 1271 |
| AvaI | CYCGRG | 1 cut(s) | 1394 |
| AvaII | GGWCC | 5 cut(s) | 467, 617, 708, 1528, 1577 |
| BaeGI | GKGCMC | 1 cut(s) | 152 |
| BalI | TGGCCA | 1 cut(s) | 1166 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 883, 915 |
| BbsI | GAAGAC | 1 cut(s) | 1617 |
| BbvI | GCAGC | 1 cut(s) | 141 |
| BccI | CCATC | 4 cut(s) | 332, 638, 649, 1472 |
| BceAI | ACGGC | 2 cut(s) | 73, 87 |
| BciT130I | CCWGG | 3 cut(s) | 923, 1305, 1584 |
| BciVI | GTATCC | 1 cut(s) | 1574 |
| BcnI | CCSGG | 2 cut(s) | 357, 474 |
| BcoDI | GTCTC | 4 cut(s) | 8, 301, 573, 1116 |
| BfaI | CTAG | 3 cut(s) | 375, 681, 909 |
| BfmI | CTRYAG | 1 cut(s) | 837 |
| BfoI | RGCGCY | 2 cut(s) | 124, 135 |
| BfrI | CTTAAG | 1 cut(s) | 1709 |
| BfuI | GTATCC | 1 cut(s) | 1574 |
| BisI | GCNGC | 1 cut(s) | 130 |
| BlsI | GCNGC | 1 cut(s) | 131 |
| BmcAI | AGTACT | 1 cut(s) | 776 |
| Bme1390I | CCNGG | 5 cut(s) | 357, 474, 923, 1305, 1584 |
| Bme18I | GGWCC | 5 cut(s) | 467, 617, 708, 1528, 1577 |
| BmeT110I | CYCGRG | 1 cut(s) | 1394 |
| BmgT120I | GGNCC | 6 cut(s) | 467, 617, 708, 1307, 1528, 1577 |
| BmiI | GGNNCC | 2 cut(s) | 709, 1530 |
| BmrFI | CCNGG | 5 cut(s) | 357, 474, 923, 1305, 1584 |
| BmsI | GCATC | 2 cut(s) | 52, 418 |
| BpiI | GAAGAC | 1 cut(s) | 1617 |
| Bpu14I | TTCGAA | 1 cut(s) | 1271 |
| BpuEI | CTTGAG | 2 cut(s) | 1317, 1637 |
| BpuMI | CCSGG | 2 cut(s) | 357, 474 |
| BsaAI | YACGTR | 1 cut(s) | 1446 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1068 |
| BsaHI | GRCGYC | 2 cut(s) | 74, 352 |
| BsaJI | CCNNGG | 2 cut(s) | 696, 1395 |
| BsaWI | WCCGGW | 2 cut(s) | 193, 619 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 485, 515, 1564, 1594 |
| Bse1I | ACTGG | 4 cut(s) | 607, 1237, 1530, 1579 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1068 |
| BseAI | TCCGGA | 1 cut(s) | 193 |
| BseBI | CCWGG | 3 cut(s) | 923, 1305, 1584 |
| BseDI | CCNNGG | 2 cut(s) | 696, 1395 |
| BseGI | GGATG | 4 cut(s) | 409, 706, 868, 1027 |
| BseJI | GATNNNNATC | 1 cut(s) | 1068 |
| BseMII | CTCAG | 6 cut(s) | 623, 999, 1449, 1458, 1530, 1550 |
| BseNI | ACTGG | 4 cut(s) | 607, 1237, 1530, 1579 |
| BseRI | GAGGAG | 3 cut(s) | 539, 663, 778 |
| BseSI | GKGCMC | 1 cut(s) | 152 |
| BseXI | GCAGC | 1 cut(s) | 141 |
| Bsh1236I | CGCG | 2 cut(s) | 209, 1630 |
| Bsh1285I | CGRYCG | 1 cut(s) | 46 |
| BshFI | GGCC | 2 cut(s) | 1166, 1308 |
| BsiEI | CGRYCG | 1 cut(s) | 46 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1394 |
| BsiSI | CCGG | 4 cut(s) | 194, 356, 473, 620 |
| BsmAI | GTCTC | 4 cut(s) | 8, 301, 573, 1116 |
| BsmBI | CGTCTC | 1 cut(s) | 573 |
| BsmI | GAATGC | 1 cut(s) | 917 |
| BsnI | GGCC | 2 cut(s) | 1166, 1308 |
| BsoBI | CYCGRG | 1 cut(s) | 1394 |
| Bsp119I | TTCGAA | 1 cut(s) | 1271 |
| Bsp1286I | GDGCHC | 1 cut(s) | 152 |
| Bsp13I | TCCGGA | 1 cut(s) | 193 |
| Bsp1407I | TGTACA | 1 cut(s) | 714 |
| Bsp143I | GATC | 6 cut(s) | 34, 43, 301, 574, 1300, 1552 |
| BspACI | CCGC | 2 cut(s) | 243, 470 |
| BspANI | GGCC | 2 cut(s) | 1166, 1308 |
| BspCNI | CTCAG | 6 cut(s) | 622, 1000, 1450, 1459, 1531, 1551 |
| BspEI | TCCGGA | 1 cut(s) | 193 |
| BspFNI | CGCG | 2 cut(s) | 209, 1630 |
| BspLI | GGNNCC | 2 cut(s) | 709, 1530 |
| BspPI | GGATC | 4 cut(s) | 29, 309, 582, 1295 |
| BspT104I | TTCGAA | 1 cut(s) | 1271 |
| BspTI | CTTAAG | 1 cut(s) | 1709 |
| BsrGI | TGTACA | 1 cut(s) | 714 |
| BsrI | ACTGG | 4 cut(s) | 607, 1237, 1530, 1579 |
| BssECI | CCNNGG | 2 cut(s) | 696, 1395 |
| BssMI | GATC | 6 cut(s) | 34, 43, 301, 574, 1300, 1552 |
| BssNI | GRCGYC | 2 cut(s) | 74, 352 |
| Bst2UI | CCWGG | 3 cut(s) | 923, 1305, 1584 |
| Bst4CI | ACNGT | 3 cut(s) | 172, 178, 725 |
| BstACI | GRCGYC | 2 cut(s) | 74, 352 |
| BstAFI | CTTAAG | 1 cut(s) | 1709 |
| BstAUI | TGTACA | 1 cut(s) | 714 |
| BstBAI | YACGTR | 1 cut(s) | 1446 |
| BstBI | TTCGAA | 1 cut(s) | 1271 |
| BstC8I | GCNNGC | 2 cut(s) | 152, 1182 |
| BstF5I | GGATG | 4 cut(s) | 409, 706, 868, 1027 |
| BstFNI | CGCG | 2 cut(s) | 209, 1630 |
| BstH2I | RGCGCY | 2 cut(s) | 124, 135 |
| BstHHI | GCGC | 2 cut(s) | 123, 134 |
| BstKTI | GATC | 6 cut(s) | 37, 46, 304, 577, 1303, 1555 |
| BstMAI | GTCTC | 4 cut(s) | 8, 301, 573, 1116 |
| BstMBI | GATC | 6 cut(s) | 34, 43, 301, 574, 1300, 1552 |
| BstMCI | CGRYCG | 1 cut(s) | 46 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 71, 129, 156, 165, 206, 1388, 1627 |
| BstNI | CCWGG | 3 cut(s) | 923, 1305, 1584 |
| BstNSI | RCATGY | 4 cut(s) | 163, 1002, 1036, 1055 |
| BstSCI | CCNGG | 5 cut(s) | 355, 472, 921, 1303, 1582 |
| BstSFI | CTRYAG | 1 cut(s) | 837 |
| BstSLI | GKGCMC | 1 cut(s) | 152 |
| BstUI | CGCG | 2 cut(s) | 209, 1630 |
| BstV1I | GCAGC | 1 cut(s) | 141 |
| BstV2I | GAAGAC | 1 cut(s) | 1617 |
| BstX2I | RGATCY | 1 cut(s) | 1300 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1574 |
| BstYI | RGATCY | 1 cut(s) | 1300 |
| BsuI | GTATCC | 1 cut(s) | 1574 |
| BsuRI | GGCC | 2 cut(s) | 1166, 1308 |
| BtgZI | GCGATG | 1 cut(s) | 75 |
| BtsCI | GGATG | 4 cut(s) | 409, 706, 868, 1027 |
| BtsIMutI | CAGTG | 1 cut(s) | 1464 |
| Cac8I | GCNNGC | 2 cut(s) | 152, 1182 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1310 |
| CfoI | GCGC | 2 cut(s) | 123, 134 |
| Cfr13I | GGNCC | 6 cut(s) | 467, 617, 708, 1307, 1528, 1577 |
| CseI | GACGC | 5 cut(s) | 54, 63, 198, 341, 663 |
| Csp6I | GTAC | 7 cut(s) | 91, 115, 360, 715, 726, 775, 996 |
| CviAII | CATG | 7 cut(s) | 145, 160, 712, 731, 999, 1033, 1052 |
| CviQI | GTAC | 7 cut(s) | 91, 115, 360, 715, 726, 775, 996 |
| DpnI | GATC | 6 cut(s) | 36, 45, 303, 576, 1302, 1554 |
| DpnII | GATC | 6 cut(s) | 34, 43, 301, 574, 1300, 1552 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 28 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 28 |
| EaeI | YGGCCR | 1 cut(s) | 1164 |
| Eco32I | GATATC | 1 cut(s) | 1545 |
| Eco47I | GGWCC | 5 cut(s) | 467, 617, 708, 1528, 1577 |
| Eco47III | AGCGCT | 1 cut(s) | 122 |
| Eco88I | CYCGRG | 1 cut(s) | 1394 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1307 |
| EcoRI | GAATTC | 3 cut(s) | 829, 967, 1601 |
| EcoRII | CCWGG | 3 cut(s) | 921, 1303, 1582 |
| EcoRV | GATATC | 1 cut(s) | 1545 |
| EcoT22I | ATGCAT | 1 cut(s) | 1443 |
| Esp3I | CGTCTC | 1 cut(s) | 573 |
| FaeI | CATG | 7 cut(s) | 148, 163, 715, 734, 1002, 1036, 1055 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 734, 766 |
| FatI | CATG | 7 cut(s) | 144, 159, 711, 730, 998, 1032, 1051 |
| Fnu4HI | GCNGC | 1 cut(s) | 130 |
| FokI | GGATG | 4 cut(s) | 416, 713, 875, 1034 |
| Fsp4HI | GCNGC | 1 cut(s) | 130 |
| FspBI | CTAG | 3 cut(s) | 375, 681, 909 |
| GlaI | GCGC | 2 cut(s) | 122, 133 |
| GluI | GCNGC | 1 cut(s) | 130 |
| HaeII | RGCGCY | 2 cut(s) | 124, 135 |
| HaeIII | GGCC | 2 cut(s) | 1166, 1308 |
| HapII | CCGG | 4 cut(s) | 194, 356, 473, 620 |
| HgaI | GACGC | 5 cut(s) | 54, 63, 198, 341, 663 |
| HhaI | GCGC | 2 cut(s) | 123, 134 |
| Hin1I | GRCGYC | 2 cut(s) | 74, 352 |
| Hin1II | CATG | 7 cut(s) | 148, 163, 715, 734, 1002, 1036, 1055 |
| Hin6I | GCGC | 2 cut(s) | 121, 132 |
| HinP1I | GCGC | 2 cut(s) | 121, 132 |
| HincII | GTYRAC | 1 cut(s) | 69 |
| HindII | GTYRAC | 1 cut(s) | 69 |
| HindIII | AAGCTT | 2 cut(s) | 452, 1335 |
| HinfI | GANTC | 6 cut(s) | 29, 107, 584, 814, 1268, 1373 |
| HpaII | CCGG | 4 cut(s) | 194, 356, 473, 620 |
| HphI | GGTGA | 1 cut(s) | 437 |
| Hpy166II | GTNNAC | 4 cut(s) | 69, 467, 728, 884 |
| Hpy188III | TCNNGA | 9 cut(s) | 194, 217, 296, 578, 681, 1095, 1250, 1394, 1484 |
| Hpy8I | GTNNAC | 4 cut(s) | 69, 467, 728, 884 |
| Hpy99I | CGWCG | 5 cut(s) | 79, 88, 100, 214, 679 |
| HpyAV | CCTTC | 6 cut(s) | 233, 530, 662, 1012, 1144, 1588 |
| HpyCH4III | ACNGT | 3 cut(s) | 172, 178, 725 |
| HpyCH4IV | ACGT | 2 cut(s) | 1090, 1445 |
| HpyCH4V | TGCA | 5 cut(s) | 431, 874, 917, 1180, 1441 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 71, 129, 156, 165, 206, 1388, 1627 |
| HpySE526I | ACGT | 2 cut(s) | 1090, 1445 |
| Hsp92I | GRCGYC | 2 cut(s) | 74, 352 |
| Hsp92II | CATG | 7 cut(s) | 148, 163, 715, 734, 1002, 1036, 1055 |
| HspAI | GCGC | 2 cut(s) | 121, 132 |
| Kpn2I | TCCGGA | 1 cut(s) | 193 |
| Kzo9I | GATC | 6 cut(s) | 34, 43, 301, 574, 1300, 1552 |
| LmnI | GCTCC | 4 cut(s) | 671, 925, 1396, 1672 |
| Lsp1109I | GCAGC | 1 cut(s) | 141 |
| LweI | GCATC | 2 cut(s) | 52, 418 |
| MaeI | CTAG | 3 cut(s) | 375, 681, 909 |
| MaeII | ACGT | 2 cut(s) | 1090, 1445 |
| MaeIII | GTNAC | 5 cut(s) | 172, 746, 979, 1024, 1462 |
| MalI | GATC | 6 cut(s) | 36, 45, 303, 576, 1302, 1554 |
| MboI | GATC | 6 cut(s) | 34, 43, 301, 574, 1300, 1552 |
| MboII | GAAGA | 8 cut(s) | 347, 677, 1154, 1277, 1522, 1622, 1691, 1703 |
| MflI | RGATCY | 1 cut(s) | 1300 |
| MhlI | GDGCHC | 1 cut(s) | 152 |
| MlsI | TGGCCA | 1 cut(s) | 1166 |
| MluCI | AATT | 9 cut(s) | 829, 967, 1117, 1168, 1202, 1324, 1351, 1501, 1601 |
| MluNI | TGGCCA | 1 cut(s) | 1166 |
| MlyI | GAGTC | 2 cut(s) | 38, 116 |
| MmeI | TCCRAC | 3 cut(s) | 363, 552, 577 |
| Mox20I | TGGCCA | 1 cut(s) | 1166 |
| Mph1103I | ATGCAT | 1 cut(s) | 1443 |
| MroI | TCCGGA | 1 cut(s) | 193 |
| MroXI | GAANNNNTTC | 1 cut(s) | 604 |
| MscI | TGGCCA | 1 cut(s) | 1166 |
| MseI | TTAA | 7 cut(s) | 183, 479, 753, 1086, 1521, 1637, 1710 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1160 |
| Msp20I | TGGCCA | 1 cut(s) | 1166 |
| MspCI | CTTAAG | 1 cut(s) | 1709 |
| MspI | CCGG | 4 cut(s) | 194, 356, 473, 620 |
| MspR9I | CCNGG | 5 cut(s) | 357, 474, 923, 1305, 1584 |
| Mva1269I | GAATGC | 1 cut(s) | 917 |
| MvaI | CCWGG | 3 cut(s) | 923, 1305, 1584 |
| MvnI | CGCG | 2 cut(s) | 209, 1630 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 71, 129, 156, 165, 206, 1388, 1627 |
| NciI | CCSGG | 2 cut(s) | 357, 474 |
| NdeII | GATC | 6 cut(s) | 34, 43, 301, 574, 1300, 1552 |
| NlaIII | CATG | 7 cut(s) | 148, 163, 715, 734, 1002, 1036, 1055 |
| NlaIV | GGNNCC | 2 cut(s) | 709, 1530 |
| NmeAIII | GCCGAG | 1 cut(s) | 180 |
| NmuCI | GTSAC | 5 cut(s) | 172, 746, 979, 1024, 1462 |
| NsiI | ATGCAT | 1 cut(s) | 1443 |
| NspI | RCATGY | 4 cut(s) | 163, 1002, 1036, 1055 |
| NspV | TTCGAA | 1 cut(s) | 1271 |
| PciI | ACATGT | 2 cut(s) | 998, 1051 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 83, 92, 108 |
| PctI | GAATGC | 1 cut(s) | 917 |
| PdmI | GAANNNNTTC | 1 cut(s) | 604 |
| PfeI | GAWTC | 4 cut(s) | 584, 814, 1268, 1373 |
| PfoI | TCCNGGA | 2 cut(s) | 921, 1582 |
| PkrI | GCNGC | 1 cut(s) | 131 |
| Ple19I | CGATCG | 1 cut(s) | 46 |
| PleI | GAGTC | 2 cut(s) | 37, 115 |
| PpsI | GAGTC | 2 cut(s) | 37, 115 |
| Ppu21I | YACGTR | 1 cut(s) | 1446 |
| PscI | ACATGT | 2 cut(s) | 998, 1051 |
| Psp1406I | AACGTT | 1 cut(s) | 1090 |
| Psp6I | CCWGG | 3 cut(s) | 921, 1303, 1582 |
| PspGI | CCWGG | 3 cut(s) | 921, 1303, 1582 |
| PspN4I | GGNNCC | 2 cut(s) | 709, 1530 |
| PspPI | GGNCC | 6 cut(s) | 467, 617, 708, 1307, 1528, 1577 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 83, 115 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1310 |
| PsuI | RGATCY | 1 cut(s) | 1300 |
| PvuI | CGATCG | 1 cut(s) | 46 |
| RsaI | GTAC | 7 cut(s) | 92, 116, 361, 716, 727, 776, 997 |
| RsaNI | GTAC | 7 cut(s) | 91, 115, 360, 715, 726, 775, 996 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1160 |
| SaqAI | TTAA | 7 cut(s) | 183, 479, 753, 1086, 1521, 1637, 1710 |
| SatI | GCNGC | 1 cut(s) | 130 |
| Sau3AI | GATC | 6 cut(s) | 34, 43, 301, 574, 1300, 1552 |
| Sau96I | GGNCC | 6 cut(s) | 467, 617, 708, 1307, 1528, 1577 |
| ScaI | AGTACT | 1 cut(s) | 776 |
| SchI | GAGTC | 2 cut(s) | 38, 116 |
| ScrFI | CCNGG | 5 cut(s) | 357, 474, 923, 1305, 1584 |
| SduI | GDGCHC | 1 cut(s) | 152 |
| SfaNI | GCATC | 2 cut(s) | 52, 418 |
| SfcI | CTRYAG | 1 cut(s) | 837 |
| SfuI | TTCGAA | 1 cut(s) | 1271 |
| SinI | GGWCC | 5 cut(s) | 467, 617, 708, 1528, 1577 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1160 |
| SmlI | CTYRAG | 3 cut(s) | 1332, 1616, 1709 |
| SmoI | CTYRAG | 3 cut(s) | 1332, 1616, 1709 |
| Sse9I | AATT | 9 cut(s) | 829, 967, 1117, 1168, 1202, 1324, 1351, 1501, 1601 |
| SsiI | CCGC | 2 cut(s) | 243, 470 |
| SspMI | CTAG | 3 cut(s) | 375, 681, 909 |
| StyD4I | CCNGG | 5 cut(s) | 355, 472, 921, 1303, 1582 |
| TaaI | ACNGT | 3 cut(s) | 172, 178, 725 |
| TaiI | ACGT | 2 cut(s) | 1093, 1448 |
| TaqI | TCGA | 9 cut(s) | 27, 42, 86, 252, 295, 314, 577, 1271, 1371 |
| TaqII | GACCGA | 2 cut(s) | 130, 202 |
| TasI | AATT | 9 cut(s) | 829, 967, 1117, 1168, 1202, 1324, 1351, 1501, 1601 |
| TatI | WGTACW | 2 cut(s) | 714, 774 |
| TfiI | GAWTC | 4 cut(s) | 584, 814, 1268, 1373 |
| Tru1I | TTAA | 7 cut(s) | 183, 479, 753, 1086, 1521, 1637, 1710 |
| Tru9I | TTAA | 7 cut(s) | 183, 479, 753, 1086, 1521, 1637, 1710 |
| TscAI | CASTG | 1 cut(s) | 1471 |
| TseFI | GTSAC | 5 cut(s) | 172, 746, 979, 1024, 1462 |
| TseI | GCWGC | 1 cut(s) | 129 |
| Tsp45I | GTSAC | 5 cut(s) | 172, 746, 979, 1024, 1462 |
| TspDTI | ATGAA | 4 cut(s) | 819, 822, 842, 1607 |
| TspGWI | ACGGA | 3 cut(s) | 27, 72, 901 |
| TspRI | CASTG | 1 cut(s) | 1471 |
| Vha464I | CTTAAG | 1 cut(s) | 1709 |
| VpaK11BI | GGWCC | 5 cut(s) | 467, 617, 708, 1528, 1577 |
| XapI | RAATTY | 6 cut(s) | 829, 967, 1117, 1202, 1501, 1601 |
| XbaI | TCTAGA | 1 cut(s) | 680 |
| XceI | RCATGY | 4 cut(s) | 163, 1002, 1036, 1055 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 142 |
| XmnI | GAANNNNTTC | 1 cut(s) | 604 |
| XspI | CTAG | 3 cut(s) | 375, 681, 909 |
| ZrmI | AGTACT | 1 cut(s) | 776 |
| Zsp2I | ATGCAT | 1 cut(s) | 1443 |