Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0010875

Physical Location & Seq

Genomic Coordinates Forward (+)

10107054 .. 10113656

Gene Structure 6603 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG135800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2694 bp

ATGGAGAGAGCAGAGACTACGACTATCGAGTCCGATCCGTTCGATCGGAAATCGGACGGCGATGCGTCAACGGCGTCGCCTCCGTCGCGGTACTCGTCGTTCGGCGAGTCCGAGTACGAGCGCTATTGCAGCGCCAACTCGGCCATGGGCACGCCGAGCATGTGTAGCACAGTCACGGTTTTCAATGATTTTCCGGAGGCTGATTTCGCGTCGGTCAGGAGTTTAGGGTTTGGGGAGGAAGGCGGTGGTGTCGAGGGTTTCAGTTTGGGAGGGAGGATTGATAGGAATAGTAATCGAGAGGATCGGAGACTTTCGAGTAGTGGTAGGATTGAGGAAGATGGTATTAGAGGGCGTCCGGGTACTAAGTATGGGTCTAGTGGGTTGGAGTTGTATGGGAATGAGGATGATGATATTGAAGTTGGTGGTGATGCAAATGAGTTGATGTCTTGGAAGCTTGACAAGAGTGGACCGCCGGGTTTAATGGAGGGTTCGGAGTTGAAGTGTGGTTCAGATGATAGTGATGAGGAAGGTGGGGGAGTGGAGAGAGGGAAAGATAGTGTGTTGGATCGAGACGATTCAAAAGAGGTTGGAACTGATTCTCAGCTTGGACAGGAAGTTGAAGAGAGATGTTTTGATGGAGGAGAGATGGAGAGGGAAGAAGGAGCGTCGTCTAGAAATGAGTATTCCGAGGATGAGGGGTCCATGTACAAGTACGGTACAGATGATGAGCCTAAGAGTGACTTTAATCATCAGAGGAGTGTAGAGTACTATGAGCAATCAAAACCAAAGAACGAAAATGAGAATCCATTTCTTATGAATTCATCTGTAGCTTTTGGTTCTGATGATTGGGATGATTTTGTGCAAGAGAGTGAACGGAGTAATATAGCTTCTTTCACTAGGAGTGCATTCCAGGAGCAGATAGAACTGAATGTAGAAACTGAAAAGAAGGTTTTGAATTCTGGTTCTGTCACTTCACATCAGGGTACATGTCAAACTGAGCAAGGGAAGGATGTGACTGACATGCCCAGAGGTAGCGAACACGTTGAAGCTGATAACAATCTGGCAGAAAATGTTAAACATTCCAGAGAACCAGCTAAGTCTCCAAATTTTGTTGAACCAGAGGGAGTAGAAGATGTGAAGGACATTCCTGTGGCCAATTATCAGGTCCAAGCTATTGAGGACTTGACTGAATTTACCAAAAGTTCTTTTACCACCCCAACTGGTTTTCAAAATGTTCAAGAACCAGAGCAGGAAGATTCAAAAGACATTGTATTGACCAAGAATAAAGATACAGCTCCTGACGAATCAGCAAATTATCCTCAAGCTTCGTTGTTTGGCAATTTCTCCAAAATACAGCTCGATTCAGAAGCAAAAAAAGCTCCCGAGGAAAAGGGTTTCAACATTGTGGTTGACGACATATCTGATGTGCATACGTGTAATAATACTGAGGTCACTGGGATTGATGATGGTCAAGATTTAGGAAATAAAATTTTGGGGAAGATAAAAGTTAAACTGGACCCCCTTTCTGAGATATCAACTGATCAACTGGGTATCCATTCAACTGGACCTCCTGGAAGTATGAAGGCAGAATTCTTTGAAGACCTTGAGCCAAATACGCGAACCTTAACTTTTGAAAATAATATGACAAAAAATGCTCCTGTTTCAGAAGATATCTTTGAAGAATATCCTATGCCACTTAAGACAGATAATTTTGAGCTAAATGAATTCTATGATGAGTTTGTTAATGACATGGAAGAAATATTGCTAGACTCTGCGGAGTCCCCAGGAGCAAGGTTCAGTCACGGTAACAGGAACTTACAATCACAACTATCTCTACCATTAAGAGATGGTGGATTGACTGCTTCTACTTCTGGTACAGATGATGCTTACCTGTTTAATCAGCATTCCCTCAGAATTGACGGGGTCGAAGTGGTGGGTGCAAGGCAGAAGAAGGGAGATGTCACCTTTAGTGAAAGACTGGTAGGAGTGAAGGAATACACTGTTTATAAAATGAGAGTGTGGAGTGGCAAGGATCAATGGGAGGTTGAACGTCGGTATCGTGATTTCTTTACACTCTACCGTCGGTTGAAAACATTGTTTGCTGACCATGGATGGAATCTACCTTCTCCCTGGTCTGCTGTAGAAAAGGAATCCAGAAAGATTTTTGGAAATGCATCTCCTGATGTTATTGCACAGAGAAGCGTTCTCATTCAAGAGTGTCTACAGTCCATTCTCCATTATAGATTCTTTTCAAGTCCTCCAAGTGCATTGATTTGGTTTTTGTCTCCTCAAGATTCATTTCCTACCTCCATGTCATCAAATACACCTGACCCTATTAATAGAAGGGCAGACACGGAAAATGTGTCCACTTTAGGAAAGACGATATCACTTATTGTTGAAGTTCGACCATACAAATCTTTGAAGCAGATTCTAGAAGCACAACATTATATGTGTGCTGGATGCCACAAACATTTTGACGATGGAAAGACCCTGATAGGGGATTTTGCACAGACATTTGGATGGGGCAAGCCTCGATTGTGTGAATATACAGGTCAATTATTTTGCTCTTCGTGCCATACGAATGAGACTGCGGTCATACCAGCAAGAGTATTGCATCACTGGGATTTTACTCAATATTCAGTGTCACAGTTAGCTAAATCTTATCTCGATTCTATACATGACCAGGTAAGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0008150 GO:0009987 GO:0012505 GO:0030154 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0045445 GO:0048856 GO:0048869 GO:0061061

KEGG Pathways

Metabolic & Signaling

ko04140 map04140

Pfam Domains

Protein Families

PX zf-RING_9

Protein Analysis

897

Amino Acids

100.07

Weight (kDa)

4.57

Isoelectric Point (pI)

49.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PX	PF00787	674 - 762	1.3e-06	PX domain
RH_dom	PF13901	845 - 895	2.3e-17	Rubicon Homology Domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010875)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48195
fragaria_vesca	FvH4_5g05470 FvH4_5g05470 FvH4_5g05470
malus_domestica	MD06G1172500.v1.1 MD14G1178400.v1.1
prunus_persica	Prupe.5G171800_v2.0.a1 Prupe.5G171800_v2.0.a1
pyrus_communis	pycom06g15360 pycom14g14870
rosa_chinensis	RchiOBHm_Chr7g0193371
rosa_laevigata	RLG00000004275
rosa_multiflora	Rmu_co8475531.1_g000001
rosa_roxburghii	Rroxscaffold_3G00262170
rosa_rugosa	Rorug07G0009200
rosa_samantha	Rh7AG135500 Rh7BG135800 Rh7CG139200 Rh7DG137200
rosa_wichuraiana	Rw7G011550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2007
AasI	GACNNNNNNGTC	1 cut(s)	28
AccI	GTMKAC	1 cut(s)	2221
AccII	CGCG	3 cut(s)	88, 209, 1618
AccIII	TCCGGA	1 cut(s)	193
AciI	CCGC	5 cut(s)	88, 243, 470, 1775, 2591
AclWI	GGATC	4 cut(s)	29, 309, 573, 2040
AcoI	YGGCCR	2 cut(s)	141, 1152
AcsI	RAATTY	7 cut(s)	817, 955, 1105, 1190, 1488, 1589, 1724
AcyI	GRCGYC	2 cut(s)	74, 352
AfaI	GTAC	9 cut(s)	92, 116, 361, 707, 713, 718, 767, 985, 1876
AfeI	AGCGCT	1 cut(s)	122
AfiI	CCNNNNNNNGG	2 cut(s)	2496, 2497
AflII	CTTAAG	1 cut(s)	1697
AflIII	ACRYGT	3 cut(s)	986, 1039, 1433
AjnI	CCWGG	5 cut(s)	909, 1570, 1783, 2129, 2682
Alw26I	GTCTC	6 cut(s)	8, 301, 564, 1104, 2289, 2579
AlwI	GGATC	4 cut(s)	29, 309, 573, 2040
AlwNI	CAGNNNCTG	1 cut(s)	1298
Ama87I	CYCGRG	1 cut(s)	1382
Aor13HI	TCCGGA	1 cut(s)	193
Aor51HI	AGCGCT	1 cut(s)	122
AoxI	GGCC	2 cut(s)	141, 1152
ApeKI	GCWGC	1 cut(s)	129
ApoI	RAATTY	7 cut(s)	817, 955, 1105, 1190, 1488, 1589, 1724
AseI	ATTAAT	1 cut(s)	2337
Asp700I	GAANNNNTTC	1 cut(s)	595
AspLEI	GCGC	2 cut(s)	123, 134
AspS9I	GGNCC	5 cut(s)	467, 699, 1165, 1516, 1565
AsuC2I	CCSGG	2 cut(s)	357, 474
AsuHPI	GGTGA	2 cut(s)	437, 1954
AvaI	CYCGRG	1 cut(s)	1382
AvaII	GGWCC	5 cut(s)	467, 699, 1165, 1516, 1565
BaeGI	GKGCMC	1 cut(s)	152
BaeI	ACNNNNGTAYC	2 cut(s)	2039, 2072
BalI	TGGCCA	1 cut(s)	1154
BarI	GAAGNNNNNNTAC	2 cut(s)	871, 903
BbsI	GAAGAC	1 cut(s)	1605
BbvI	GCAGC	1 cut(s)	141
BccI	CCATC	8 cut(s)	332, 629, 640, 1460, 1841, 2106, 2474, 2514
BceAI	ACGGC	2 cut(s)	73, 87
BciT130I	CCWGG	5 cut(s)	911, 1572, 1785, 2131, 2684
BciVI	GTATCC	1 cut(s)	1562
BclI	TGATCA	1 cut(s)	1540
BcnI	CCSGG	2 cut(s)	357, 474
BcoDI	GTCTC	6 cut(s)	8, 301, 564, 1104, 2289, 2579
BfaI	CTAG	5 cut(s)	375, 672, 897, 1766, 2432
BfmI	CTRYAG	3 cut(s)	825, 2139, 2222
BfoI	RGCGCY	2 cut(s)	124, 135
BfrI	CTTAAG	1 cut(s)	1697
BfuI	GTATCC	1 cut(s)	1562
BglI	GCCNNNNNGGC	1 cut(s)	140
BisI	GCNGC	1 cut(s)	130
BlsI	GCNGC	1 cut(s)	131
BmcAI	AGTACT	1 cut(s)	767
Bme1390I	CCNGG	7 cut(s)	357, 474, 911, 1572, 1785, 2131, 2684
Bme18I	GGWCC	5 cut(s)	467, 699, 1165, 1516, 1565
BmeT110I	CYCGRG	1 cut(s)	1382
BmgT120I	GGNCC	5 cut(s)	467, 699, 1165, 1516, 1565
BmiI	GGNNCC	2 cut(s)	700, 1518
BmrFI	CCNGG	7 cut(s)	357, 474, 911, 1572, 1785, 2131, 2684
BmrI	ACTGGG	3 cut(s)	1464, 1556, 2629
BmsI	GCATC	6 cut(s)	52, 418, 1873, 2183, 2450, 2623
BmuI	ACTGGG	3 cut(s)	1464, 1556, 2629
BoxI	GACNNNNGTC	1 cut(s)	2591
BpiI	GAAGAC	1 cut(s)	1605
BpuEI	CTTGAG	3 cut(s)	1305, 1625, 2274
BpuMI	CCSGG	2 cut(s)	357, 474
BsaAI	YACGTR	1 cut(s)	1434
BsaBI	GATNNNNATC	1 cut(s)	1056
BsaHI	GRCGYC	2 cut(s)	74, 352
BsaJI	CCNNGG	6 cut(s)	144, 687, 1383, 1783, 2107, 2129
BsaWI	WCCGGW	1 cut(s)	193
BsaXI	ACNNNNNCTCC	4 cut(s)	485, 515, 1552, 1582
Bsc4I	CCNNNNNNNGG	2 cut(s)	2496, 2497
Bse1I	ACTGG	7 cut(s)	1225, 1459, 1518, 1551, 1567, 1983, 2624
Bse8I	GATNNNNATC	1 cut(s)	1056
BseAI	TCCGGA	1 cut(s)	193
BseBI	CCWGG	5 cut(s)	911, 1572, 1785, 2131, 2684
BseDI	CCNNGG	6 cut(s)	144, 687, 1383, 1783, 2107, 2129
BseGI	GGATG	7 cut(s)	409, 697, 856, 1015, 2117, 2465, 2525
BseJI	GATNNNNATC	1 cut(s)	1056
BseLI	CCNNNNNNNGG	2 cut(s)	2496, 2497
BseMII	CTCAG	5 cut(s)	614, 987, 1437, 1518, 1924
BseNI	ACTGG	7 cut(s)	1225, 1459, 1518, 1551, 1567, 1983, 2624
BseRI	GAGGAG	3 cut(s)	654, 769, 2277
BseSI	GKGCMC	1 cut(s)	152
BseXI	GCAGC	1 cut(s)	141
Bsh1236I	CGCG	3 cut(s)	88, 209, 1618
Bsh1285I	CGRYCG	1 cut(s)	46
BshFI	GGCC	2 cut(s)	143, 1154
BsiEI	CGRYCG	1 cut(s)	46
BsiHKCI	CYCGRG	1 cut(s)	1382
BsiSI	CCGG	3 cut(s)	194, 356, 473
BslFI	GGGAC	1 cut(s)	1765
BslI	CCNNNNNNNGG	2 cut(s)	2496, 2497
BsmAI	GTCTC	6 cut(s)	8, 301, 564, 1104, 2289, 2579
BsmBI	CGTCTC	1 cut(s)	564
BsmFI	GGGAC	1 cut(s)	1765
BsmI	GAATGC	2 cut(s)	905, 1903
BsnI	GGCC	2 cut(s)	143, 1154
BsoBI	CYCGRG	1 cut(s)	1382
Bsp1286I	GDGCHC	1 cut(s)	152
Bsp13I	TCCGGA	1 cut(s)	193
Bsp1407I	TGTACA	1 cut(s)	705
Bsp143I	GATC	6 cut(s)	34, 43, 301, 565, 1540, 2032
Bsp19I	CCATGG	2 cut(s)	144, 2107
BspACI	CCGC	5 cut(s)	88, 243, 470, 1775, 2591
BspANI	GGCC	2 cut(s)	143, 1154
BspCNI	CTCAG	5 cut(s)	613, 988, 1438, 1519, 1923
BspEI	TCCGGA	1 cut(s)	193
BspFNI	CGCG	3 cut(s)	88, 209, 1618
BspLI	GGNNCC	2 cut(s)	700, 1518
BspPI	GGATC	4 cut(s)	29, 309, 573, 2040
BspQI	GCTCTTC	1 cut(s)	2572
BspTI	CTTAAG	1 cut(s)	1697
BsrGI	TGTACA	1 cut(s)	705
BsrI	ACTGG	7 cut(s)	1225, 1459, 1518, 1551, 1567, 1983, 2624
BssECI	CCNNGG	6 cut(s)	144, 687, 1383, 1783, 2107, 2129
BssMI	GATC	6 cut(s)	34, 43, 301, 565, 1540, 2032
BssNI	GRCGYC	2 cut(s)	74, 352
BssT1I	CCWWGG	2 cut(s)	144, 2107
Bst2UI	CCWGG	5 cut(s)	911, 1572, 1785, 2131, 2684
Bst4CI	ACNGT	8 cut(s)	172, 178, 716, 1805, 2002, 2081, 2226, 2649
Bst6I	CTCTTC	2 cut(s)	615, 2572
BstACI	GRCGYC	2 cut(s)	74, 352
BstAFI	CTTAAG	1 cut(s)	1697
BstAUI	TGTACA	1 cut(s)	705
BstBAI	YACGTR	1 cut(s)	1434
BstC8I	GCNNGC	2 cut(s)	152, 2528
BstDEI	CTNAG	8 cut(s)	363, 600, 732, 996, 1095, 1446, 1527, 1910
BstDSI	CCRYGG	2 cut(s)	144, 2107
BstF5I	GGATG	7 cut(s)	409, 697, 856, 1015, 2117, 2465, 2525
BstFNI	CGCG	3 cut(s)	88, 209, 1618
BstH2I	RGCGCY	2 cut(s)	124, 135
BstHHI	GCGC	2 cut(s)	123, 134
BstKTI	GATC	6 cut(s)	37, 46, 304, 568, 1543, 2035
BstMAI	GTCTC	6 cut(s)	8, 301, 564, 1104, 2289, 2579
BstMBI	GATC	6 cut(s)	34, 43, 301, 565, 1540, 2032
BstMCI	CGRYCG	1 cut(s)	46
BstNI	CCWGG	5 cut(s)	911, 1572, 1785, 2131, 2684
BstNSI	RCATGY	3 cut(s)	163, 990, 1024
BstPAI	GACNNNNGTC	1 cut(s)	2591
BstSCI	CCNGG	7 cut(s)	355, 472, 909, 1570, 1783, 2129, 2682
BstSFI	CTRYAG	3 cut(s)	825, 2139, 2222
BstSLI	GKGCMC	1 cut(s)	152
BstUI	CGCG	3 cut(s)	88, 209, 1618
BstV1I	GCAGC	1 cut(s)	141
BstV2I	GAAGAC	1 cut(s)	1605
BstXI	CCANNNNNNTGG	1 cut(s)	1562
BsuI	GTATCC	1 cut(s)	1562
BsuRI	GGCC	2 cut(s)	143, 1154
BtgI	CCRYGG	2 cut(s)	144, 2107
BtgZI	GCGATG	1 cut(s)	75
BtsCI	GGATG	7 cut(s)	409, 697, 856, 1015, 2117, 2465, 2525
BtsIMutI	CAGTG	4 cut(s)	1452, 1998, 2617, 2646
Cac8I	GCNNGC	2 cut(s)	152, 2528
CaiI	CAGNNNCTG	1 cut(s)	1298
CfoI	GCGC	2 cut(s)	123, 134
Cfr13I	GGNCC	5 cut(s)	467, 699, 1165, 1516, 1565
CseI	GACGC	5 cut(s)	54, 63, 198, 341, 654
CsiI	ACCWGGT	1 cut(s)	2682
Csp6I	GTAC	9 cut(s)	91, 115, 360, 706, 712, 717, 766, 984, 1875
CviAII	CATG	9 cut(s)	145, 160, 703, 987, 1021, 1750, 2108, 2311, 2678
CviQI	GTAC	9 cut(s)	91, 115, 360, 706, 712, 717, 766, 984, 1875
DdeI	CTNAG	8 cut(s)	363, 600, 732, 996, 1095, 1446, 1527, 1910
DpnI	GATC	6 cut(s)	36, 45, 303, 567, 1542, 2034
DpnII	GATC	6 cut(s)	34, 43, 301, 565, 1540, 2032
DrdI	GACNNNNNNGTC	1 cut(s)	28
DseDI	GACNNNNNNGTC	1 cut(s)	28
EaeI	YGGCCR	2 cut(s)	141, 1152
Eam1104I	CTCTTC	2 cut(s)	615, 2572
EarI	CTCTTC	2 cut(s)	615, 2572
Eco130I	CCWWGG	2 cut(s)	144, 2107
Eco32I	GATATC	3 cut(s)	1533, 1672, 2385
Eco47I	GGWCC	5 cut(s)	467, 699, 1165, 1516, 1565
Eco47III	AGCGCT	1 cut(s)	122
Eco88I	CYCGRG	1 cut(s)	1382
EcoRI	GAATTC	4 cut(s)	817, 955, 1589, 1724
EcoRII	CCWGG	5 cut(s)	909, 1570, 1783, 2129, 2682
EcoRV	GATATC	3 cut(s)	1533, 1672, 2385
EcoT14I	CCWWGG	2 cut(s)	144, 2107
EcoT22I	ATGCAT	1 cut(s)	2176
ErhI	CCWWGG	2 cut(s)	144, 2107
Esp3I	CGTCTC	1 cut(s)	564
FaeI	CATG	9 cut(s)	148, 163, 706, 990, 1024, 1753, 2111, 2314, 2681
FalI	AAGNNNNNCTT	2 cut(s)	725, 757
FaqI	GGGAC	1 cut(s)	1765
FatI	CATG	9 cut(s)	144, 159, 702, 986, 1020, 1749, 2107, 2310, 2677
FbaI	TGATCA	1 cut(s)	1540
FblI	GTMKAC	1 cut(s)	2221
Fnu4HI	GCNGC	1 cut(s)	130
FokI	GGATG	7 cut(s)	416, 704, 863, 1022, 2124, 2472, 2532
Fsp4HI	GCNGC	1 cut(s)	130
FspBI	CTAG	5 cut(s)	375, 672, 897, 1766, 2432
GlaI	GCGC	2 cut(s)	122, 133
GluI	GCNGC	1 cut(s)	130
HaeII	RGCGCY	2 cut(s)	124, 135
HaeIII	GGCC	2 cut(s)	143, 1154
HapII	CCGG	3 cut(s)	194, 356, 473
HgaI	GACGC	5 cut(s)	54, 63, 198, 341, 654
HhaI	GCGC	2 cut(s)	123, 134
Hin1I	GRCGYC	2 cut(s)	74, 352
Hin1II	CATG	9 cut(s)	148, 163, 706, 990, 1024, 1753, 2111, 2314, 2681
Hin6I	GCGC	2 cut(s)	121, 132
HinP1I	GCGC	2 cut(s)	121, 132
HincII	GTYRAC	2 cut(s)	69, 1411
HindII	GTYRAC	2 cut(s)	69, 1411
HindIII	AAGCTT	2 cut(s)	452, 1323
HpaII	CCGG	3 cut(s)	194, 356, 473
HphI	GGTGA	2 cut(s)	437, 1954
Hpy166II	GTNNAC	6 cut(s)	69, 467, 872, 1411, 2222, 2367
Hpy8I	GTNNAC	6 cut(s)	69, 467, 872, 1411, 2222, 2367
Hpy99I	CGWCG	7 cut(s)	79, 88, 100, 214, 670, 2055, 2085
HpyCH4III	ACNGT	8 cut(s)	172, 178, 716, 1805, 2002, 2081, 2226, 2649
HpyCH4IV	ACGT	3 cut(s)	1041, 1433, 2050
HpyF3I	CTNAG	8 cut(s)	363, 600, 732, 996, 1095, 1446, 1527, 1910
HpySE526I	ACGT	3 cut(s)	1041, 1433, 2050
Hsp92I	GRCGYC	2 cut(s)	74, 352
Hsp92II	CATG	9 cut(s)	148, 163, 706, 990, 1024, 1753, 2111, 2314, 2681
HspAI	GCGC	2 cut(s)	121, 132
Kpn2I	TCCGGA	1 cut(s)	193
Ksp22I	TGATCA	1 cut(s)	1540
Kzo9I	GATC	6 cut(s)	34, 43, 301, 565, 1540, 2032
LguI	GCTCTTC	1 cut(s)	2572
LmnI	GCTCC	6 cut(s)	662, 913, 1300, 1384, 1660, 1787
Lsp1109I	GCAGC	1 cut(s)	141
LweI	GCATC	6 cut(s)	52, 418, 1873, 2183, 2450, 2623
MabI	ACCWGGT	1 cut(s)	2682
MaeI	CTAG	5 cut(s)	375, 672, 897, 1766, 2432
MaeII	ACGT	3 cut(s)	1041, 1433, 2050
MaeIII	GTNAC	9 cut(s)	172, 737, 967, 1012, 1450, 1799, 1805, 1960, 2643
MalI	GATC	6 cut(s)	36, 45, 303, 567, 1542, 2034
MboI	GATC	6 cut(s)	34, 43, 301, 565, 1540, 2032
MhlI	GDGCHC	1 cut(s)	152
MlsI	TGGCCA	1 cut(s)	1154
MluNI	TGGCCA	1 cut(s)	1154
MlyI	GAGTC	4 cut(s)	38, 116, 1763, 1787
MmeI	TCCRAC	3 cut(s)	363, 543, 568
Mox20I	TGGCCA	1 cut(s)	1154
Mph1103I	ATGCAT	1 cut(s)	2176
MroI	TCCGGA	1 cut(s)	193
MroXI	GAANNNNTTC	1 cut(s)	595
MscI	TGGCCA	1 cut(s)	1154
MslI	CAYNNNNRTG	3 cut(s)	1148, 2518, 2580
Msp20I	TGGCCA	1 cut(s)	1154
MspCI	CTTAAG	1 cut(s)	1697
MspI	CCGG	3 cut(s)	194, 356, 473
MspR9I	CCNGG	7 cut(s)	357, 474, 911, 1572, 1785, 2131, 2684
Mva1269I	GAATGC	2 cut(s)	905, 1903
MvaI	CCWGG	5 cut(s)	911, 1572, 1785, 2131, 2684
MvnI	CGCG	3 cut(s)	88, 209, 1618
NciI	CCSGG	2 cut(s)	357, 474
NcoI	CCATGG	2 cut(s)	144, 2107
NdeII	GATC	6 cut(s)	34, 43, 301, 565, 1540, 2032
NlaIII	CATG	9 cut(s)	148, 163, 706, 990, 1024, 1753, 2111, 2314, 2681
NlaIV	GGNNCC	2 cut(s)	700, 1518
NmeAIII	GCCGAG	2 cut(s)	119, 180
NmuCI	GTSAC	8 cut(s)	172, 737, 967, 1012, 1450, 1799, 1960, 2643
NsiI	ATGCAT	1 cut(s)	2176
NspI	RCATGY	3 cut(s)	163, 990, 1024
PciI	ACATGT	1 cut(s)	986
PciSI	GCTCTTC	1 cut(s)	2572
PcsI	WCGNNNNNNNCGW	4 cut(s)	92, 108, 2056, 2576
PctI	GAATGC	2 cut(s)	905, 1903
PdmI	GAANNNNTTC	1 cut(s)	595
PflFI	GACNNNGTC	1 cut(s)	1922
PfoI	TCCNGGA	2 cut(s)	909, 1570
PkrI	GCNGC	1 cut(s)	131
Ple19I	CGATCG	1 cut(s)	46
PleI	GAGTC	4 cut(s)	37, 115, 1763, 1786
PpsI	GAGTC	4 cut(s)	37, 115, 1763, 1786
Ppu21I	YACGTR	1 cut(s)	1434
PscI	ACATGT	1 cut(s)	986
PshAI	GACNNNNGTC	1 cut(s)	2591
PshBI	ATTAAT	1 cut(s)	2337
PsiI	TTATAA	1 cut(s)	2007
Psp6I	CCWGG	5 cut(s)	909, 1570, 1783, 2129, 2682
PspGI	CCWGG	5 cut(s)	909, 1570, 1783, 2129, 2682
PspN4I	GGNNCC	2 cut(s)	700, 1518
PspPI	GGNCC	5 cut(s)	467, 699, 1165, 1516, 1565
PsrI	GAACNNNNNNTAC	2 cut(s)	83, 115
PstNI	CAGNNNCTG	1 cut(s)	1298
PsyI	GACNNNGTC	1 cut(s)	1922
PvuI	CGATCG	1 cut(s)	46
RsaI	GTAC	9 cut(s)	92, 116, 361, 707, 713, 718, 767, 985, 1876
RsaNI	GTAC	9 cut(s)	91, 115, 360, 706, 712, 717, 766, 984, 1875
RseI	CAYNNNNRTG	3 cut(s)	1148, 2518, 2580
SapI	GCTCTTC	1 cut(s)	2572
SatI	GCNGC	1 cut(s)	130
Sau3AI	GATC	6 cut(s)	34, 43, 301, 565, 1540, 2032
Sau96I	GGNCC	5 cut(s)	467, 699, 1165, 1516, 1565
ScaI	AGTACT	1 cut(s)	767
SchI	GAGTC	4 cut(s)	38, 116, 1763, 1787
ScrFI	CCNGG	7 cut(s)	357, 474, 911, 1572, 1785, 2131, 2684
SduI	GDGCHC	1 cut(s)	152
SexAI	ACCWGGT	1 cut(s)	2682
SfaNI	GCATC	6 cut(s)	52, 418, 1873, 2183, 2450, 2623
SfcI	CTRYAG	3 cut(s)	825, 2139, 2222
SinI	GGWCC	5 cut(s)	467, 699, 1165, 1516, 1565
SmiMI	CAYNNNNRTG	3 cut(s)	1148, 2518, 2580
SmlI	CTYRAG	4 cut(s)	1320, 1604, 1697, 2289
SmoI	CTYRAG	4 cut(s)	1320, 1604, 1697, 2289
SsiI	CCGC	5 cut(s)	88, 243, 470, 1775, 2591
SspI	AATATT	2 cut(s)	1761, 2636
SspMI	CTAG	5 cut(s)	375, 672, 897, 1766, 2432
StyD4I	CCNGG	7 cut(s)	355, 472, 909, 1570, 1783, 2129, 2682
StyI	CCWWGG	2 cut(s)	144, 2107
TaaI	ACNGT	8 cut(s)	172, 178, 716, 1805, 2002, 2081, 2226, 2649
TaiI	ACGT	3 cut(s)	1044, 1436, 2053
TaqII	GACCGA	1 cut(s)	202
TatI	WGTACW	2 cut(s)	705, 765
TscAI	CASTG	4 cut(s)	1459, 2005, 2624, 2646
TseFI	GTSAC	8 cut(s)	172, 737, 967, 1012, 1450, 1799, 1960, 2643
TseI	GCWGC	1 cut(s)	129
Tsp45I	GTSAC	8 cut(s)	172, 737, 967, 1012, 1450, 1799, 1960, 2643
TspDTI	ATGAA	5 cut(s)	810, 830, 1595, 1737, 2286
TspGWI	ACGGA	4 cut(s)	27, 72, 889, 2369
TspRI	CASTG	4 cut(s)	1459, 2005, 2624, 2646
Tth111I	GACNNNGTC	1 cut(s)	1922
Vha464I	CTTAAG	1 cut(s)	1697
VpaK11BI	GGWCC	5 cut(s)	467, 699, 1165, 1516, 1565
VspI	ATTAAT	1 cut(s)	2337
XapI	RAATTY	7 cut(s)	817, 955, 1105, 1190, 1488, 1589, 1724
XbaI	TCTAGA	2 cut(s)	671, 2431
XceI	RCATGY	3 cut(s)	163, 990, 1024
XcmI	CCANNNNNNNNNTGG	1 cut(s)	142
XmiI	GTMKAC	1 cut(s)	2221
XmnI	GAANNNNTTC	1 cut(s)	595
XspI	CTAG	5 cut(s)	375, 672, 897, 1766, 2432
ZrmI	AGTACT	1 cut(s)	767
Zsp2I	ATGCAT	1 cut(s)	2176

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.