RchiOBHm_Chr7g0193371

DUF4206

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Forward (+)
11704863 .. 11710725
5863 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ17291

Sequence Viewer

Length: 3366 bp
ATGGAGAGAGCAGAGACTACGACTATCGAGTCCGATCCGTTCGATCGGAAATCGGACGGCGATGCGTCAACGGCGTCGCCTCCGTCGAGGTACTCGTCGTTCGGCGAGTCCGAGTACGAGCGCTATGGCAGCGCCAACTCGGTCATGGGCACGCCGAGCATGTGTAGCACAGTCACGGTTTTTAATGATTTTCCGGAGGCTGATTTCGCGTCGGTCAGGAGTTTAGGGTTTGGGGAGGAAGGCGGTGGTGTCGAGGGTTTCAGTTTGGGAGGGAGGATTGATAGGAATAGTAATCGAGAGGATCGGAGACTTTCGAGTAGTGGTAGGATTGAGGAAGATGGTATTAGAGGGCGTCCGGGTACTAAGTATGGGTCTAGTGGGTTGGAGTTGTATGGGAATGAGGATGATGATATTGGAGTTGGTGGTGATGCAAATGAGTTGATGTCTTGGAAGCTTGACAAGAGTGGACCGCCGGGTTTAATGGAGGGTTCGGAGTTGAAGTGTGGTTCAGATGATAGTGATGAGGAGAATGAGGAAGGCAGGGGAGTGGAGAGAGGGAAAGATTGTGTGTTGGATCGAGACGATTCAAAAGAGGTTGGAACTGGTTCTCAGCTTGGACCGGAAGTTGAGCAGAGATGTTTTGATGGAGGAGAGATGGATAGGGAAGAAGGAGCGTCGTCTAGAAATGAGTATTCCGAGGATGAGGGGTCCATGTACAACTATGGTACACATGATGAGCCTAAGAGTGACTTTAATCATCAGAGGAGTGTAGAGTACTACTATGAGCAATCAAAACCAAAGAATGAAAATGAGAATCCATTTCTTATGAATTCATCTGTAGCCTTTGGTTCTGATGATTGGGATGATTTTGTGCAAGAGAGTGAACGGAGTAATATAGCTTCTTTCACTAGGAGTGCATTCCAGGAGCAGATAGAACTGAATGTGGAAACTGAAAAGAAAGTTTTGAATTCTGGTTCTGTCACTTCACATCAGGGTACATGTCAAACTGAGCAAGGGAAGGATGTGACTGACATGCCCAGAGGTAGCGAACATGTTGAAGCTGATAACAATCTGGCAGAAAGTGTTAAACGTTCCAGAGAACCAGCTAAGTCTCCAAATTTTGTTGAACCAGAGGGAGTAGAAGATGTGAAGGACATTCCTGTGGCCAATTATCAGGTGCAAGCTATTGAGGACTTGACTGAATTTACCAAAAGTTCTTTTACCACCCCAACTGGTTTTCAAAATGTTCAAGAACCAGAGCAGGAAGATTCGAAAGACATTGTATTGACCAAGAATAAAGATCCAGGCCCTGACAAATCAGCAAATTATCCTCAAGCTTCGTTGTCTGGCAATTTCTCCAAAATACAGCTCGATTCAGAAGCCAAAAAAGCTCCTGAGGAAAAGGGTTTCAACATTGTGGTTGACGACATATCTGATATGCATACGTGTAATAATACTGAGGTCACTGAGATTGATGATGGTCAAGATTTAGGAAATAAAAATTTGGGGAAGATAAAAGTTAAACTGGACCCCCTTTCTGAGATATCAACCGATCAACTGAGTATCCATTCAACTGGACCTCCTGGAAGTATGAAGGCAGAATTCTTTGAAGACCTTGAGCCAAATACGCGAACCTTAACTTTTGAAAATAATATGACGAAAAATGCTCCTGTTTCAGAAGATATTTTTGAAGAATATCCTATGCCACTTAAGACAGATAATTTTGAGCTAAATGAATTCTATGATGAGTTTGTTAATGACATGGAAGAAATATTGCTAGACTCTGCGGAGTCCCCCGGAGCAAGGTTCAGTCATGGTAACAGGAACTTACAATCACAACTATCTTTACCATTAAGAGATGGTGGATCGACTGCTTCTACTTCTGGTACAGATGATGCTTACCTGTTTAATCAGCATTCCCTCAGAATTGATGGGGTCGAAGTGGTGGGTGCAAAGCAGAAGAAGGGAGATGTCACCTTTAGTGAAAGACTGGTAGGAGTGAAGGAATACACTGTTTATAGAATGAGAGTGTGGAGTGGCAAGGATCAATGGGAGGTTGAACGTCGGTATCGTGATTTCTTTACACTCTACCGTCGGTTGAAAACATTGTTTGCTGACCATGGATGGAATCTACCTTCTCCCTGGTCTGCTGTAGAAAAGGAATCCAGAAAGATTTTTGGAAATGCATCTCCTGATGTTATTGCACAGAGAAGCGTTCTCATTCAAGAGTGTCTACAGTCCATTCTCCATTATAGATTCTTTTCGAGTCCTCCAAGTGCATTGATTTGGTTTCTGTCTCCTCAAGATTCATTTCCTACCTCCATGTCCTCAAATACACCTGATCCTATTAATAGAAGGGCAGACACAGAAAATTTGTCCACTTTAGGAAAGACGATATCACTTATTGTTGAAGTTCGACCATACAAATCTTTGAAGCAGATTCTAGAAGCACAACATTATATGTGTGCTGGATGCCACAAACATTTTGACGATGGAAAGACCCTGATACTGGATTTTGCACAGACATTTGGATGGGGCAAGCCTCGATTGTGTGAATATACAGGTCAATTATTTTGCTCTTCGTGCCATACGAATGAGACTGCGGTCATACCAGCAAGAGTATTGCATCACTGGGATTTTACTCAATATTCAGTGTCACAGTTAGCTAAATCTTATCTCGATTCTATACATGACCAGCCAATGCTATGTGTCAGTGCAGTTAATCCATTCCTTTTCTCAAAGGTCCCAGCCTTGCTTCATGTTATGGGTGTTAGGAAGAAAATAGGCACCATGCTTCCATATGTTCGTTGCCCTTTCCGCAGGACAATCAACAAAGGTCTTGGGTCTAGAAAATATCTTCTCGAAGGCAATGATTTTTTTGCACTGAGAGACCTCATTGATCTTTCAAAAGGAGCCTTTGCAGTGCTGCCTGTGATGGTGGAAACCGTGTTGAGTAAAATTTGTGGGCATATCACAGAGCAGTGTCTCATATGCTGTGATGTGGGAGTTCCCTGTGGTGCACGACAAGCATGCAATGACCCTTCATCTCTCATTTTCCCTTTCCAGGAAGATGAGATTGAAAGGTGCCCGTCTTGTGAATCAGTATTTCATAAGCTTTGCTTCAGAAAACTCACAAACTGCGCTTGTGGAGAACAACTGAGACCCGATGAGCCTGCAGAGCTCGTTAGGAGGGCCAACTCTGTGCTTGGCGTTGAGGTTAGTGGAGTATTGGACTTGTTTGGGAAAGGGTCGGGTTCTGGATTACTCTCAGGATTATTTTCAAAGGTGAAGACAGATAATCCAAGGGAACATAAAGATGGCGACAATGTCATTTTGATGGGTTCCTTCCCACCTACTTCATTATAA

Protein Analysis

1121

Amino Acids

124.66

Weight (kDa)

4.78

Isoelectric Point (pI)

49.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PX PF00787 678 - 766 1.8e-06 PX domain
RH_dom PF13901 849 - 1052 2.6e-54 Rubicon Homology Domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010875)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3364
AasI GACNNNNNNGTC 1 cut(s) 28
AccB1I GGYRCC 2 cut(s) 2786, 3084
AccI GTMKAC 1 cut(s) 2233
AccII CGCG 2 cut(s) 209, 1630
AccIII TCCGGA 1 cut(s) 193
AciI CCGC 5 cut(s) 243, 470, 1787, 2603, 2818
AclI AACGTT 1 cut(s) 1090
AclWI GGATC 7 cut(s) 29, 309, 582, 1295, 1873, 2052, 2336
AcoI YGGCCR 1 cut(s) 1164
AcsI RAATTY 9 cut(s) 829, 967, 1117, 1202, 1501, 1601, 1736, 2371, 2958
AcuI CTGAAG 1 cut(s) 3106
AcyI GRCGYC 2 cut(s) 74, 352
AfaI GTAC 8 cut(s) 92, 116, 361, 716, 727, 776, 997, 1888
AfeI AGCGCT 1 cut(s) 122
AfiI CCNNNNNNNGG 3 cut(s) 1803, 2509, 3064
AflII CTTAAG 1 cut(s) 1709
AflIII ACRYGT 3 cut(s) 998, 1051, 1445
AjnI CCWGG 5 cut(s) 921, 1303, 1582, 2141, 3063
Alw21I GWGCWC 2 cut(s) 3022, 3183
Alw26I GTCTC 9 cut(s) 8, 301, 573, 1116, 2301, 2591, 2883, 2990, 3154
Alw44I GTGCAC 1 cut(s) 3018
AlwI GGATC 7 cut(s) 29, 309, 582, 1295, 1873, 2052, 2336
AlwNI CAGNNNCTG 1 cut(s) 1310
Aor13HI TCCGGA 1 cut(s) 193
Aor51HI AGCGCT 1 cut(s) 122
AoxI GGCC 3 cut(s) 1164, 1306, 3192
ApaLI GTGCAC 1 cut(s) 3018
ApeKI GCWGC 2 cut(s) 129, 2926
ApoI RAATTY 9 cut(s) 829, 967, 1117, 1202, 1501, 1601, 1736, 2371, 2958
AseI ATTAAT 1 cut(s) 2349
Asp700I GAANNNNTTC 1 cut(s) 604
AspLEI GCGC 3 cut(s) 123, 134, 3143
AspS9I GGNCC 8 cut(s) 467, 617, 708, 1307, 1528, 1577, 2743, 3192
AsuC2I CCSGG 3 cut(s) 357, 474, 1797
AsuHPI GGTGA 3 cut(s) 437, 1966, 3298
AsuII TTCGAA 1 cut(s) 1271
AvaII GGWCC 6 cut(s) 467, 617, 708, 1528, 1577, 2743
AxyI CCTNAGG 1 cut(s) 1395
BaeGI GKGCMC 3 cut(s) 152, 3022, 3089
BaeI ACNNNNGTAYC 2 cut(s) 2051, 2084
BalI TGGCCA 1 cut(s) 1166
BanI GGYRCC 2 cut(s) 2786, 3084
BanII GRGCYC 1 cut(s) 3183
BarI GAAGNNNNNNTAC 2 cut(s) 883, 915
BbsI GAAGAC 2 cut(s) 1617, 3296
Bbv12I GWGCWC 2 cut(s) 3022, 3183
BbvI GCAGC 2 cut(s) 141, 2913
BceAI ACGGC 2 cut(s) 73, 87
BcgI CGANNNNNNTGC 4 cut(s) 3012, 3046, 3155, 3189
BciT130I CCWGG 5 cut(s) 923, 1305, 1584, 2143, 3065
BciVI GTATCC 1 cut(s) 1574
BcnI CCSGG 3 cut(s) 357, 474, 1797
BcoDI GTCTC 9 cut(s) 8, 301, 573, 1116, 2301, 2591, 2883, 2990, 3154
BfaI CTAG 6 cut(s) 375, 681, 909, 1778, 2444, 2847
BfmI CTRYAG 4 cut(s) 837, 2151, 2234, 3174
BfoI RGCGCY 2 cut(s) 124, 135
BfrI CTTAAG 1 cut(s) 1709
BfuI GTATCC 1 cut(s) 1574
BisI GCNGC 2 cut(s) 130, 2927
BlsI GCNGC 2 cut(s) 131, 2928
BmcAI AGTACT 1 cut(s) 776
Bme1390I CCNGG 8 cut(s) 357, 474, 923, 1305, 1584, 1797, 2143, 3065
Bme18I GGWCC 6 cut(s) 467, 617, 708, 1528, 1577, 2743
BmgT120I GGNCC 8 cut(s) 467, 617, 708, 1307, 1528, 1577, 2743, 3192
BmiI GGNNCC 7 cut(s) 709, 1530, 2745, 2788, 2914, 3086, 3343
BmrFI CCNGG 8 cut(s) 357, 474, 923, 1305, 1584, 1797, 2143, 3065
BmrI ACTGGG 1 cut(s) 2641
BmsI GCATC 6 cut(s) 52, 418, 1885, 2195, 2462, 2635
BmuI ACTGGG 1 cut(s) 2641
BoxI GACNNNNGTC 1 cut(s) 2603
BpiI GAAGAC 2 cut(s) 1617, 3296
Bpu14I TTCGAA 1 cut(s) 1271
BpuEI CTTGAG 3 cut(s) 1317, 1637, 2286
BpuMI CCSGG 3 cut(s) 357, 474, 1797
BsaAI YACGTR 1 cut(s) 1446
BsaBI GATNNNNATC 1 cut(s) 1068
BsaHI GRCGYC 2 cut(s) 74, 352
BsaI GGTCTC 2 cut(s) 2883, 3154
BsaJI CCNNGG 5 cut(s) 696, 1795, 2119, 2141, 3302
BsaWI WCCGGW 2 cut(s) 193, 619
BsaXI ACNNNNNCTCC 4 cut(s) 485, 515, 1564, 1594
Bsc4I CCNNNNNNNGG 3 cut(s) 1803, 2509, 3064
Bse1I ACTGG 7 cut(s) 607, 1237, 1530, 1579, 1995, 2514, 2636
Bse21I CCTNAGG 1 cut(s) 1395
Bse3DI GCAATG 2 cut(s) 2875, 3040
Bse8I GATNNNNATC 1 cut(s) 1068
BseAI TCCGGA 1 cut(s) 193
BseBI CCWGG 5 cut(s) 923, 1305, 1584, 2143, 3065
BseDI CCNNGG 5 cut(s) 696, 1795, 2119, 2141, 3302
BseGI GGATG 7 cut(s) 409, 706, 868, 1027, 2129, 2477, 2537
BseJI GATNNNNATC 1 cut(s) 1068
BseLI CCNNNNNNNGG 3 cut(s) 1803, 2509, 3064
BseMI GCAATG 2 cut(s) 2875, 3040
BseNI ACTGG 7 cut(s) 607, 1237, 1530, 1579, 1995, 2514, 2636
BseRI GAGGAG 4 cut(s) 539, 663, 778, 2289
BseSI GKGCMC 3 cut(s) 152, 3022, 3089
BseXI GCAGC 2 cut(s) 141, 2913
BseYI CCCAGC 1 cut(s) 2746
BsgI GTGCAG 1 cut(s) 2736
Bsh1236I CGCG 2 cut(s) 209, 1630
Bsh1285I CGRYCG 1 cut(s) 46
BshFI GGCC 3 cut(s) 1166, 1308, 3194
BshNI GGYRCC 2 cut(s) 2786, 3084
BsiEI CGRYCG 1 cut(s) 46
BsiHKAI GWGCWC 2 cut(s) 3022, 3183
BsiSI CCGG 5 cut(s) 194, 356, 473, 620, 1797
BslFI GGGAC 2 cut(s) 1777, 2729
BslI CCNNNNNNNGG 3 cut(s) 1803, 2509, 3064
BsmAI GTCTC 9 cut(s) 8, 301, 573, 1116, 2301, 2591, 2883, 2990, 3154
BsmBI CGTCTC 1 cut(s) 573
BsmFI GGGAC 2 cut(s) 1777, 2729
BsmI GAATGC 2 cut(s) 917, 1915
BsnI GGCC 3 cut(s) 1166, 1308, 3194
Bso31I GGTCTC 2 cut(s) 2883, 3154
Bsp119I TTCGAA 1 cut(s) 1271
Bsp1286I GDGCHC 4 cut(s) 152, 3022, 3089, 3183
Bsp13I TCCGGA 1 cut(s) 193
Bsp1407I TGTACA 1 cut(s) 714
Bsp19I CCATGG 1 cut(s) 2119
BspACI CCGC 5 cut(s) 243, 470, 1787, 2603, 2818
BspANI GGCC 3 cut(s) 1166, 1308, 3194
BspEI TCCGGA 1 cut(s) 193
BspFNI CGCG 2 cut(s) 209, 1630
BspLI GGNNCC 7 cut(s) 709, 1530, 2745, 2788, 2914, 3086, 3343
BspMAI CTGCAG 1 cut(s) 3178
BspPI GGATC 7 cut(s) 29, 309, 582, 1295, 1873, 2052, 2336
BspQI GCTCTTC 1 cut(s) 2584
BspT104I TTCGAA 1 cut(s) 1271
BspT107I GGYRCC 2 cut(s) 2786, 3084
BspTI CTTAAG 1 cut(s) 1709
BspTNI GGTCTC 2 cut(s) 2883, 3154
BsrDI GCAATG 2 cut(s) 2875, 3040
BsrGI TGTACA 1 cut(s) 714
BsrI ACTGG 7 cut(s) 607, 1237, 1530, 1579, 1995, 2514, 2636
BssECI CCNNGG 5 cut(s) 696, 1795, 2119, 2141, 3302
BssNI GRCGYC 2 cut(s) 74, 352
BssT1I CCWWGG 2 cut(s) 2119, 3302
Bst2UI CCWGG 5 cut(s) 923, 1305, 1584, 2143, 3065
Bst4CI ACNGT 7 cut(s) 172, 178, 2014, 2093, 2238, 2661, 2947
Bst6I CTCTTC 1 cut(s) 2584
BstACI GRCGYC 2 cut(s) 74, 352
BstAFI CTTAAG 1 cut(s) 1709
BstAUI TGTACA 1 cut(s) 714
BstBAI YACGTR 1 cut(s) 1446
BstBI TTCGAA 1 cut(s) 1271
BstC8I GCNNGC 5 cut(s) 152, 1182, 2540, 3031, 3174
BstDSI CCRYGG 1 cut(s) 2119
BstF5I GGATG 7 cut(s) 409, 706, 868, 1027, 2129, 2477, 2537
BstFNI CGCG 2 cut(s) 209, 1630
BstH2I RGCGCY 2 cut(s) 124, 135
BstHHI GCGC 3 cut(s) 123, 134, 3143
BstMAI GTCTC 9 cut(s) 8, 301, 573, 1116, 2301, 2591, 2883, 2990, 3154
BstMCI CGRYCG 1 cut(s) 46
BstNI CCWGG 5 cut(s) 923, 1305, 1584, 2143, 3065
BstNSI RCATGY 5 cut(s) 163, 1002, 1036, 1055, 3033
BstPAI GACNNNNGTC 1 cut(s) 2603
BstSCI CCNGG 8 cut(s) 355, 472, 921, 1303, 1582, 1795, 2141, 3063
BstSFI CTRYAG 4 cut(s) 837, 2151, 2234, 3174
BstSLI GKGCMC 3 cut(s) 152, 3022, 3089
BstUI CGCG 2 cut(s) 209, 1630
BstV1I GCAGC 2 cut(s) 141, 2913
BstV2I GAAGAC 2 cut(s) 1617, 3296
BstX2I RGATCY 1 cut(s) 1300
BstXI CCANNNNNNTGG 1 cut(s) 1574
BstYI RGATCY 1 cut(s) 1300
Bsu36I CCTNAGG 1 cut(s) 1395
BsuI GTATCC 1 cut(s) 1574
BsuRI GGCC 3 cut(s) 1166, 1308, 3194
BtgI CCRYGG 1 cut(s) 2119
BtgZI GCGATG 1 cut(s) 75
BtsCI GGATG 7 cut(s) 409, 706, 868, 1027, 2129, 2477, 2537
BtsI GCAGTG 2 cut(s) 2928, 2987
BtsIMutI CAGTG 8 cut(s) 1464, 2010, 2629, 2658, 2719, 2882, 2928, 2987
Cac8I GCNNGC 5 cut(s) 152, 1182, 2540, 3031, 3174
CaiI CAGNNNCTG 1 cut(s) 1310
CfoI GCGC 3 cut(s) 123, 134, 3143
Cfr13I GGNCC 8 cut(s) 467, 617, 708, 1307, 1528, 1577, 2743, 3192
CseI GACGC 5 cut(s) 54, 63, 198, 341, 663
Csp6I GTAC 8 cut(s) 91, 115, 360, 715, 726, 775, 996, 1887
CviQI GTAC 8 cut(s) 91, 115, 360, 715, 726, 775, 996, 1887
DrdI GACNNNNNNGTC 1 cut(s) 28
DseDI GACNNNNNNGTC 1 cut(s) 28
EaeI YGGCCR 1 cut(s) 1164
Eam1104I CTCTTC 1 cut(s) 2584
EarI CTCTTC 1 cut(s) 2584
Ecl136II GAGCTC 1 cut(s) 3181
Eco130I CCWWGG 2 cut(s) 2119, 3302
Eco24I GRGCYC 1 cut(s) 3183
Eco31I GGTCTC 2 cut(s) 2883, 3154
Eco32I GATATC 2 cut(s) 1545, 2397
Eco47I GGWCC 6 cut(s) 467, 617, 708, 1528, 1577, 2743
Eco47III AGCGCT 1 cut(s) 122
Eco53kI GAGCTC 1 cut(s) 3181
Eco57I CTGAAG 1 cut(s) 3106
Eco81I CCTNAGG 1 cut(s) 1395
EcoICRI GAGCTC 1 cut(s) 3181
EcoO109I RGGNCCY 2 cut(s) 1307, 2743
EcoRI GAATTC 4 cut(s) 829, 967, 1601, 1736
EcoRII CCWGG 5 cut(s) 921, 1303, 1582, 2141, 3063
EcoRV GATATC 2 cut(s) 1545, 2397
EcoT14I CCWWGG 2 cut(s) 2119, 3302
EcoT22I ATGCAT 2 cut(s) 1443, 2188
EcoT38I GRGCYC 1 cut(s) 3183
ErhI CCWWGG 2 cut(s) 2119, 3302
Esp3I CGTCTC 1 cut(s) 573
FalI AAGNNNNNCTT 4 cut(s) 734, 766, 3104, 3136
FaqI GGGAC 2 cut(s) 1777, 2729
FauNDI CATATG 2 cut(s) 2800, 2990
FblI GTMKAC 1 cut(s) 2233
Fnu4HI GCNGC 2 cut(s) 130, 2927
FokI GGATG 7 cut(s) 416, 713, 875, 1034, 2136, 2484, 2544
FriOI GRGCYC 1 cut(s) 3183
Fsp4HI GCNGC 2 cut(s) 130, 2927
FspBI CTAG 6 cut(s) 375, 681, 909, 1778, 2444, 2847
GlaI GCGC 3 cut(s) 122, 133, 3142
GluI GCNGC 2 cut(s) 130, 2927
GsaI CCCAGC 1 cut(s) 2750
HaeII RGCGCY 2 cut(s) 124, 135
HaeIII GGCC 3 cut(s) 1166, 1308, 3194
HapII CCGG 5 cut(s) 194, 356, 473, 620, 1797
HgaI GACGC 5 cut(s) 54, 63, 198, 341, 663
HhaI GCGC 3 cut(s) 123, 134, 3143
Hin1I GRCGYC 2 cut(s) 74, 352
Hin6I GCGC 3 cut(s) 121, 132, 3141
HinP1I GCGC 3 cut(s) 121, 132, 3141
HincII GTYRAC 2 cut(s) 69, 1423
HindII GTYRAC 2 cut(s) 69, 1423
HindIII AAGCTT 3 cut(s) 452, 1335, 3113
HpaII CCGG 5 cut(s) 194, 356, 473, 620, 1797
HphI GGTGA 3 cut(s) 437, 1966, 3298
Hpy166II GTNNAC 8 cut(s) 69, 467, 728, 884, 1423, 2234, 2379, 3020
Hpy8I GTNNAC 8 cut(s) 69, 467, 728, 884, 1423, 2234, 2379, 3020
Hpy99I CGWCG 7 cut(s) 79, 88, 100, 214, 679, 2067, 2097
HpyCH4III ACNGT 7 cut(s) 172, 178, 2014, 2093, 2238, 2661, 2947
HpyCH4IV ACGT 3 cut(s) 1090, 1445, 2062
HpySE526I ACGT 3 cut(s) 1090, 1445, 2062
Hsp92I GRCGYC 2 cut(s) 74, 352
HspAI GCGC 3 cut(s) 121, 132, 3141
Kpn2I TCCGGA 1 cut(s) 193
LguI GCTCTTC 1 cut(s) 2584
LmnI GCTCC 6 cut(s) 671, 925, 1396, 1672, 1799, 2912
Lsp1109I GCAGC 2 cut(s) 141, 2913
LweI GCATC 6 cut(s) 52, 418, 1885, 2195, 2462, 2635
MaeI CTAG 6 cut(s) 375, 681, 909, 1778, 2444, 2847
MaeII ACGT 3 cut(s) 1090, 1445, 2062
MaeIII GTNAC 8 cut(s) 172, 746, 979, 1024, 1462, 1817, 1972, 2655
MflI RGATCY 1 cut(s) 1300
MhlI GDGCHC 4 cut(s) 152, 3022, 3089, 3183
MlsI TGGCCA 1 cut(s) 1166
MluNI TGGCCA 1 cut(s) 1166
MlyI GAGTC 5 cut(s) 38, 116, 1775, 1799, 2275
MmeI TCCRAC 3 cut(s) 363, 552, 577
Mox20I TGGCCA 1 cut(s) 1166
Mph1103I ATGCAT 2 cut(s) 1443, 2188
MroI TCCGGA 1 cut(s) 193
MroXI GAANNNNTTC 1 cut(s) 604
MscI TGGCCA 1 cut(s) 1166
MslI CAYNNNNRTG 5 cut(s) 1160, 2530, 2592, 3315, 3335
Msp20I TGGCCA 1 cut(s) 1166
MspCI CTTAAG 1 cut(s) 1709
MspI CCGG 5 cut(s) 194, 356, 473, 620, 1797
MspR9I CCNGG 8 cut(s) 357, 474, 923, 1305, 1584, 1797, 2143, 3065
Mva1269I GAATGC 2 cut(s) 917, 1915
MvaI CCWGG 5 cut(s) 923, 1305, 1584, 2143, 3065
MvnI CGCG 2 cut(s) 209, 1630
NciI CCSGG 3 cut(s) 357, 474, 1797
NcoI CCATGG 1 cut(s) 2119
NdeI CATATG 2 cut(s) 2800, 2990
NlaIV GGNNCC 7 cut(s) 709, 1530, 2745, 2788, 2914, 3086, 3343
NmeAIII GCCGAG 1 cut(s) 180
NmuCI GTSAC 7 cut(s) 172, 746, 979, 1024, 1462, 1972, 2655
NsiI ATGCAT 2 cut(s) 1443, 2188
NspI RCATGY 5 cut(s) 163, 1002, 1036, 1055, 3033
NspV TTCGAA 1 cut(s) 1271
PaeI GCATGC 1 cut(s) 3033
PciI ACATGT 2 cut(s) 998, 1051
PciSI GCTCTTC 1 cut(s) 2584
PcsI WCGNNNNNNNCGW 5 cut(s) 83, 92, 108, 2068, 2588
PctI GAATGC 2 cut(s) 917, 1915
PdmI GAANNNNTTC 1 cut(s) 604
PflFI GACNNNGTC 1 cut(s) 3326
PfoI TCCNGGA 3 cut(s) 921, 1582, 3063
PkrI GCNGC 2 cut(s) 131, 2928
Ple19I CGATCG 1 cut(s) 46
PleI GAGTC 5 cut(s) 37, 115, 1775, 1798, 2274
PpsI GAGTC 5 cut(s) 37, 115, 1775, 1798, 2274
Ppu21I YACGTR 1 cut(s) 1446
PpuMI RGGWCCY 1 cut(s) 2743
PscI ACATGT 2 cut(s) 998, 1051
PshAI GACNNNNGTC 1 cut(s) 2603
PshBI ATTAAT 1 cut(s) 2349
PsiI TTATAA 1 cut(s) 3364
Psp124BI GAGCTC 1 cut(s) 3183
Psp1406I AACGTT 1 cut(s) 1090
Psp5II RGGWCCY 1 cut(s) 2743
Psp6I CCWGG 5 cut(s) 921, 1303, 1582, 2141, 3063
PspFI CCCAGC 1 cut(s) 2746
PspGI CCWGG 5 cut(s) 921, 1303, 1582, 2141, 3063
PspN4I GGNNCC 7 cut(s) 709, 1530, 2745, 2788, 2914, 3086, 3343
PspPI GGNCC 8 cut(s) 467, 617, 708, 1307, 1528, 1577, 2743, 3192
PspPPI RGGWCCY 1 cut(s) 2743
PsrI GAACNNNNNNTAC 2 cut(s) 83, 115
PstI CTGCAG 1 cut(s) 3178
PstNI CAGNNNCTG 1 cut(s) 1310
PsuI RGATCY 1 cut(s) 1300
PsyI GACNNNGTC 1 cut(s) 3326
PvuI CGATCG 1 cut(s) 46
RsaI GTAC 8 cut(s) 92, 116, 361, 716, 727, 776, 997, 1888
RsaNI GTAC 8 cut(s) 91, 115, 360, 715, 726, 775, 996, 1887
RseI CAYNNNNRTG 5 cut(s) 1160, 2530, 2592, 3315, 3335
SacI GAGCTC 1 cut(s) 3183
SapI GCTCTTC 1 cut(s) 2584
SatI GCNGC 2 cut(s) 130, 2927
Sau96I GGNCC 8 cut(s) 467, 617, 708, 1307, 1528, 1577, 2743, 3192
ScaI AGTACT 1 cut(s) 776
SchI GAGTC 5 cut(s) 38, 116, 1775, 1799, 2275
ScrFI CCNGG 8 cut(s) 357, 474, 923, 1305, 1584, 1797, 2143, 3065
SduI GDGCHC 4 cut(s) 152, 3022, 3089, 3183
SfaNI GCATC 6 cut(s) 52, 418, 1885, 2195, 2462, 2635
SfcI CTRYAG 4 cut(s) 837, 2151, 2234, 3174
SfuI TTCGAA 1 cut(s) 1271
SinI GGWCC 6 cut(s) 467, 617, 708, 1528, 1577, 2743
SmiMI CAYNNNNRTG 5 cut(s) 1160, 2530, 2592, 3315, 3335
SmlI CTYRAG 4 cut(s) 1332, 1616, 1709, 2301
SmoI CTYRAG 4 cut(s) 1332, 1616, 1709, 2301
SphI GCATGC 1 cut(s) 3033
SsiI CCGC 5 cut(s) 243, 470, 1787, 2603, 2818
SspI AATATT 2 cut(s) 1773, 2648
SspMI CTAG 6 cut(s) 375, 681, 909, 1778, 2444, 2847
SstI GAGCTC 1 cut(s) 3183
StyD4I CCNGG 8 cut(s) 355, 472, 921, 1303, 1582, 1795, 2141, 3063
StyI CCWWGG 2 cut(s) 2119, 3302
TaaI ACNGT 7 cut(s) 172, 178, 2014, 2093, 2238, 2661, 2947
TaiI ACGT 3 cut(s) 1093, 1448, 2065
TaqII GACCGA 2 cut(s) 130, 202
TatI WGTACW 2 cut(s) 714, 774
TscAI CASTG 8 cut(s) 1471, 2017, 2636, 2658, 2719, 2889, 2928, 2987
TseFI GTSAC 7 cut(s) 172, 746, 979, 1024, 1462, 1972, 2655
TseI GCWGC 2 cut(s) 129, 2926
Tsp45I GTSAC 7 cut(s) 172, 746, 979, 1024, 1462, 1972, 2655
TspGWI ACGGA 3 cut(s) 27, 72, 901
TspRI CASTG 8 cut(s) 1471, 2017, 2636, 2658, 2719, 2889, 2928, 2987
Tth111I GACNNNGTC 1 cut(s) 3326
Vha464I CTTAAG 1 cut(s) 1709
VneI GTGCAC 1 cut(s) 3018
VpaK11BI GGWCC 6 cut(s) 467, 617, 708, 1528, 1577, 2743
VspI ATTAAT 1 cut(s) 2349
XapI RAATTY 9 cut(s) 829, 967, 1117, 1202, 1501, 1601, 1736, 2371, 2958
XbaI TCTAGA 3 cut(s) 680, 2443, 2846
XceI RCATGY 5 cut(s) 163, 1002, 1036, 1055, 3033
XcmI CCANNNNNNNNNTGG 1 cut(s) 142
XmiI GTMKAC 1 cut(s) 2233
XmnI GAANNNNTTC 1 cut(s) 604
XspI CTAG 6 cut(s) 375, 681, 909, 1778, 2444, 2847
ZrmI AGTACT 1 cut(s) 776
Zsp2I ATGCAT 2 cut(s) 1443, 2188
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.