Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0003752

Physical Location & Seq

Genomic Coordinates Forward (+)

15058712 .. 15059967

Gene Structure 1256 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G178600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 981 bp

ATGGCCGTTCCTATACTTCTCCTCCTCCTCTTCTTCTCTATCCCCTTCTCCGAATCTAAGCTCAGCGAAGACTACTACAAGCAAACATGTCCAGATTTCCAGAAAATTGTAAGAGAAACCGTGACCATAAAGCAAGCCGGCCAACCCGTCACCGCTGCCGGCACTCTCCGCCTCTTCTTCCACGACTGCATGGTCGAGGGATGCGACGCTTCCGTCTTCATCGCCTCCAACCATGTCAACAAAGCTGAGCGAGACGCCGACATCAACCAATCCCTGTCAGGTGACGCCTTCGAGGTGGTCGTCCGTGCCAAGACCGCGCTCGAGCTCACCTGCCCGGGAATTGTCTCGTGCGCAGACATTCTCGCAGAGGCCACCCGTGACCTCGTCACAATGGTCGGCGGGCCTTTCTACCCCGTCAAATTAGGACGAAAAGATGGACAGGTGTCCCTAGCGTCCAAGGTTGATGCAAACTTGCCAAAAACAAACCAAACCATGGATGAGATTATCAAGCTATTTGCTGACAAAGGTTTCACAATCGAAGAAATGGTGGCTTTGACAGGTGGACACACAATTGGGTTTTCTCATTGCAAGGAGTTCACCGATAGGCTTTTCCATTACAGCCCGACTACACCAACAGACCCAGTAATGAACCCAAGATTCGCCGAAGGGTTGAAGAAGACTTGTGCTAATTACACAACTAACCCTGCCATGTCTGCCTTCAACGACGTCATCACACCTGGCAAGTTTGACAACATATATTATCAGAATTTGAAGAGGGGGTTGGGGCTGTTGTCTTCAGACCATGCACTTGTCAAGGACCCAAGAACAATGCCTTTGGTGGAGTTGTACTCTAAGAACCAGGAAGCGTTTTTCAAGGCTTTCGGTCACGCAATGGAGAAGCTTGGCCATCATGAGATCAAGACCGGACAACAGGGTGAGGTGAGGCGCAGGTGTGATGCGTTTAACACGATTCAGGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0009044 GO:0016787 GO:0016798 GO:0097599

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

peroxidase

Protein Analysis

327

Amino Acids

36.06

Weight (kDa)

6.32

Isoelectric Point (pI)

34.87

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003752)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G17690 AT5G47000
fragaria_vesca	FvH4_5g16450
malus_domestica	MD06G1180500.v1.1 MD06G1180700.v1.1 MD14G1185700.v1.1
prunus_persica	Prupe.5G178600_v2.0.a1 Prupe.5G178700_v2.0.a1
pyrus_communis	pycom14g15460 pycom14g15470
rosa_chinensis	RchiOBHm_Chr7g0179641 RchiOBHm_Chr7g0179651
rosa_laevigata	RLG00000005333 RLG00000005334 RLG00000018713
rosa_multiflora	Rmu_sc0005329.1_g000029 Rmu_sc0005329.1_g000030
rosa_roxburghii	Rroxscaffold_155G00443830 Rroxscaffold_155G00443840 Rroxscaffold_3G00273560
rosa_rugosa	Rorug06G0426900 Rorug06G0427200
rosa_samantha	Rh2AG300900 Rh2DG325100 Rh7AG026400 Rh7AG026600 Rh7BG025500 Rh7BG025600 Rh7CG027600 Rh7CG027800 Rh7DG027200 Rh7DG027300
rosa_wichuraiana	Rw7G002120 Rw7G002130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	338, 939
AasI	GACNNNNNNGTC	2 cut(s)	191, 212
AatII	GACGTC	1 cut(s)	729
Acc16I	TGCGCA	1 cut(s)	352
Acc36I	ACCTGC	2 cut(s)	338, 939
AccB7I	CCANNNNNTGG	1 cut(s)	493
AccII	CGCG	1 cut(s)	317
AciI	CCGC	4 cut(s)	153, 169, 315, 399
AcoI	YGGCCR	3 cut(s)	3, 139, 904
AcsI	RAATTY	1 cut(s)	766
AcuI	CTGAAG	1 cut(s)	780
AcyI	GRCGYC	3 cut(s)	255, 285, 726
AfaI	GTAC	1 cut(s)	848
AfiI	CCNNNNNNNGG	1 cut(s)	493
AflIII	ACRYGT	1 cut(s)	86
AgsI	TTSAA	4 cut(s)	673, 721, 772, 874
AjnI	CCWGG	2 cut(s)	736, 858
AjuI	GAANNNNNNNTTGG	2 cut(s)	764, 796
AluBI	AGCT	5 cut(s)	61, 245, 325, 511, 901
AluI	AGCT	5 cut(s)	61, 245, 325, 511, 901
Alw21I	GWGCWC	1 cut(s)	327
Alw26I	GTCTC	2 cut(s)	246, 349
Ama87I	CYCGRG	2 cut(s)	320, 334
AoxI	GGCC	5 cut(s)	3, 139, 369, 401, 904
ApeKI	GCWGC	1 cut(s)	155
ApoI	RAATTY	1 cut(s)	766
AspLEI	GCGC	3 cut(s)	319, 353, 948
AspS9I	GGNCC	2 cut(s)	401, 817
AsuC2I	CCSGG	2 cut(s)	335, 336
AsuHPI	GGTGA	6 cut(s)	142, 293, 319, 589, 947, 952
AvaI	CYCGRG	2 cut(s)	320, 334
AvaII	GGWCC	1 cut(s)	817
BalI	TGGCCA	1 cut(s)	906
BanII	GRGCYC	1 cut(s)	327
BauI	CACGAG	1 cut(s)	346
BbsI	GAAGAC	4 cut(s)	75, 208, 683, 786
Bbv12I	GWGCWC	1 cut(s)	327
BbvI	GCAGC	1 cut(s)	142
BccI	CCATC	2 cut(s)	428, 915
BciT130I	CCWGG	2 cut(s)	738, 860
BcnI	CCSGG	2 cut(s)	335, 336
BcoDI	GTCTC	2 cut(s)	246, 349
BfaI	CTAG	1 cut(s)	449
BfuAI	ACCTGC	2 cut(s)	338, 939
BisI	GCNGC	1 cut(s)	156
BlpI	GCTNAGC	2 cut(s)	62, 246
BlsI	GCNGC	1 cut(s)	157
Bme1390I	CCNGG	4 cut(s)	335, 336, 738, 860
Bme18I	GGWCC	1 cut(s)	817
BmeT110I	CYCGRG	2 cut(s)	320, 334
BmgT120I	GGNCC	2 cut(s)	401, 817
BmiI	GGNNCC	1 cut(s)	819
BmrFI	CCNGG	4 cut(s)	335, 336, 738, 860
BmrI	ACTGGG	1 cut(s)	635
BmsI	GCATC	3 cut(s)	191, 454, 946
BmuI	ACTGGG	1 cut(s)	635
BoxI	GACNNNNGTC	1 cut(s)	442
BpiI	GAAGAC	4 cut(s)	75, 208, 683, 786
BplI	GAGNNNNNCTC	2 cut(s)	833, 865
Bpu1102I	GCTNAGC	2 cut(s)	62, 246
BpuMI	CCSGG	2 cut(s)	335, 336
BsaHI	GRCGYC	3 cut(s)	255, 285, 726
BsaJI	CCNNGG	3 cut(s)	334, 456, 492
BsaWI	WCCGGW	1 cut(s)	923
BsaXI	ACNNNNNCTCC	2 cut(s)	6, 36
Bsc4I	CCNNNNNNNGG	1 cut(s)	493
Bse118I	RCCGGY	2 cut(s)	137, 158
Bse1I	ACTGG	1 cut(s)	641
Bse3DI	GCAATG	2 cut(s)	583, 897
BseBI	CCWGG	2 cut(s)	738, 860
BseDI	CCNNGG	3 cut(s)	334, 456, 492
BseGI	GGATG	2 cut(s)	206, 502
BseLI	CCNNNNNNNGG	1 cut(s)	493
BseMI	GCAATG	2 cut(s)	583, 897
BseMII	CTCAG	2 cut(s)	76, 237
BseNI	ACTGG	1 cut(s)	641
BseRI	GAGGAG	3 cut(s)	11, 14, 17
BseXI	GCAGC	1 cut(s)	142
Bsh1236I	CGCG	1 cut(s)	317
BshFI	GGCC	5 cut(s)	5, 141, 371, 403, 906
BsiHKAI	GWGCWC	1 cut(s)	327
BsiHKCI	CYCGRG	2 cut(s)	320, 334
BsiSI	CCGG	4 cut(s)	138, 159, 335, 924
BslFI	GGGAC	1 cut(s)	430
BslI	CCNNNNNNNGG	1 cut(s)	493
BsmAI	GTCTC	2 cut(s)	246, 349
BsmBI	CGTCTC	1 cut(s)	246
BsmFI	GGGAC	1 cut(s)	430
BsnI	GGCC	5 cut(s)	5, 141, 371, 403, 906
BsoBI	CYCGRG	2 cut(s)	320, 334
Bsp1286I	GDGCHC	1 cut(s)	327
Bsp143I	GATC	1 cut(s)	915
Bsp1720I	GCTNAGC	2 cut(s)	62, 246
Bsp19I	CCATGG	1 cut(s)	492
BspACI	CCGC	4 cut(s)	153, 169, 315, 399
BspANI	GGCC	5 cut(s)	5, 141, 371, 403, 906
BspCNI	CTCAG	2 cut(s)	75, 238
BspFNI	CGCG	1 cut(s)	317
BspHI	TCATGA	1 cut(s)	910
BspLI	GGNNCC	1 cut(s)	819
BspMI	ACCTGC	2 cut(s)	338, 939
BsrDI	GCAATG	2 cut(s)	583, 897
BsrFI	RCCGGY	2 cut(s)	137, 158
BsrI	ACTGG	1 cut(s)	641
BssAI	RCCGGY	2 cut(s)	137, 158
BssECI	CCNNGG	3 cut(s)	334, 456, 492
BssMI	GATC	1 cut(s)	915
BssNI	GRCGYC	3 cut(s)	255, 285, 726
BssSI	CACGAG	1 cut(s)	346
BssT1I	CCWWGG	2 cut(s)	456, 492
Bst2BI	CACGAG	1 cut(s)	346
Bst2UI	CCWGG	2 cut(s)	738, 860
Bst4CI	ACNGT	1 cut(s)	121
Bst6I	CTCTTC	3 cut(s)	35, 179, 767
BstACI	GRCGYC	3 cut(s)	255, 285, 726
BstC8I	GCNNGC	4 cut(s)	135, 139, 160, 401
BstDEI	CTNAG	5 cut(s)	57, 62, 246, 852, 978
BstDSI	CCRYGG	1 cut(s)	492
BstF5I	GGATG	2 cut(s)	206, 502
BstFNI	CGCG	1 cut(s)	317
BstHHI	GCGC	3 cut(s)	319, 353, 948
BstKTI	GATC	1 cut(s)	918
BstMAI	GTCTC	2 cut(s)	246, 349
BstMBI	GATC	1 cut(s)	915
BstMWI	GCNNNNNNNGC	3 cut(s)	168, 314, 713
BstNI	CCWGG	2 cut(s)	738, 860
BstNSI	RCATGY	1 cut(s)	90
BstPAI	GACNNNNGTC	1 cut(s)	442
BstSCI	CCNGG	4 cut(s)	333, 334, 736, 858
BstUI	CGCG	1 cut(s)	317
BstV1I	GCAGC	1 cut(s)	142
BstV2I	GAAGAC	4 cut(s)	75, 208, 683, 786
BsuRI	GGCC	5 cut(s)	5, 141, 371, 403, 906
BtgI	CCRYGG	1 cut(s)	492
BtgZI	GCGATG	1 cut(s)	205
BtsCI	GGATG	2 cut(s)	206, 502
BveI	ACCTGC	2 cut(s)	338, 939
Cac8I	GCNNGC	4 cut(s)	135, 139, 160, 401
CciI	TCATGA	1 cut(s)	910
CfoI	GCGC	3 cut(s)	319, 353, 948
Cfr10I	RCCGGY	2 cut(s)	137, 158
Cfr13I	GGNCC	2 cut(s)	401, 817
Cfr9I	CCCGGG	1 cut(s)	334
CseI	GACGC	4 cut(s)	215, 263, 293, 441
Csp6I	GTAC	1 cut(s)	847
CviAII	CATG	7 cut(s)	87, 190, 233, 493, 709, 803, 911
CviQI	GTAC	1 cut(s)	847
DdeI	CTNAG	5 cut(s)	57, 62, 246, 852, 978
DpnI	GATC	1 cut(s)	917
DpnII	GATC	1 cut(s)	915
DrdI	GACNNNNNNGTC	2 cut(s)	191, 212
DseDI	GACNNNNNNGTC	2 cut(s)	191, 212
EaeI	YGGCCR	3 cut(s)	3, 139, 904
Eam1104I	CTCTTC	3 cut(s)	35, 179, 767
EarI	CTCTTC	3 cut(s)	35, 179, 767
EciI	GGCGGA	1 cut(s)	158
Ecl136II	GAGCTC	1 cut(s)	325
Eco130I	CCWWGG	2 cut(s)	456, 492
Eco24I	GRGCYC	1 cut(s)	327
Eco47I	GGWCC	1 cut(s)	817
Eco53kI	GAGCTC	1 cut(s)	325
Eco57I	CTGAAG	1 cut(s)	780
Eco88I	CYCGRG	2 cut(s)	320, 334
EcoICRI	GAGCTC	1 cut(s)	325
EcoO109I	RGGNCCY	1 cut(s)	817
EcoRII	CCWGG	2 cut(s)	736, 858
EcoT14I	CCWWGG	2 cut(s)	456, 492
EcoT38I	GRGCYC	1 cut(s)	327
ErhI	CCWWGG	2 cut(s)	456, 492
Esp3I	CGTCTC	1 cut(s)	246
FaeI	CATG	7 cut(s)	90, 193, 236, 496, 712, 806, 914
FaqI	GGGAC	1 cut(s)	430
FatI	CATG	7 cut(s)	86, 189, 232, 492, 708, 802, 910
FauI	CCCGC	1 cut(s)	392
Fnu4HI	GCNGC	1 cut(s)	156
FokI	GGATG	2 cut(s)	213, 509
FriOI	GRGCYC	1 cut(s)	327
Fsp4HI	GCNGC	1 cut(s)	156
FspBI	CTAG	1 cut(s)	449
FspI	TGCGCA	1 cut(s)	352
GlaI	GCGC	3 cut(s)	318, 352, 947
GluI	GCNGC	1 cut(s)	156
HaeIII	GGCC	5 cut(s)	5, 141, 371, 403, 906
HapII	CCGG	4 cut(s)	138, 159, 335, 924
HgaI	GACGC	4 cut(s)	215, 263, 293, 441
HhaI	GCGC	3 cut(s)	319, 353, 948
Hin1I	GRCGYC	3 cut(s)	255, 285, 726
Hin1II	CATG	7 cut(s)	90, 193, 236, 496, 712, 806, 914
Hin6I	GCGC	3 cut(s)	317, 351, 946
HinP1I	GCGC	3 cut(s)	317, 351, 946
HincII	GTYRAC	1 cut(s)	238
HindII	GTYRAC	1 cut(s)	238
HindIII	AAGCTT	1 cut(s)	899
HinfI	GANTC	3 cut(s)	53, 657, 970
HpaII	CCGG	4 cut(s)	138, 159, 335, 924
HphI	GGTGA	6 cut(s)	142, 293, 319, 589, 947, 952
Hpy166II	GTNNAC	3 cut(s)	238, 563, 597
Hpy188I	TCNGA	3 cut(s)	52, 765, 799
Hpy188III	TCNNGA	4 cut(s)	92, 100, 911, 919
Hpy8I	GTNNAC	3 cut(s)	238, 563, 597
Hpy99I	CGWCG	2 cut(s)	209, 728
HpyAV	CCTTC	4 cut(s)	55, 298, 659, 727
HpyCH4III	ACNGT	1 cut(s)	121
HpyCH4IV	ACGT	1 cut(s)	726
HpyCH4V	TGCA	4 cut(s)	189, 467, 588, 806
HpyF10VI	GCNNNNNNNGC	3 cut(s)	168, 314, 713
HpyF3I	CTNAG	5 cut(s)	57, 62, 246, 852, 978
HpySE526I	ACGT	1 cut(s)	726
Hsp92I	GRCGYC	3 cut(s)	255, 285, 726
Hsp92II	CATG	7 cut(s)	90, 193, 236, 496, 712, 806, 914
HspAI	GCGC	3 cut(s)	317, 351, 946
KroI	GCCGGC	2 cut(s)	137, 158
KroNI	GCCGGC	2 cut(s)	139, 160
Kzo9I	GATC	1 cut(s)	915
Lsp1109I	GCAGC	1 cut(s)	142
LweI	GCATC	3 cut(s)	191, 454, 946
MaeI	CTAG	1 cut(s)	449
MaeII	ACGT	1 cut(s)	726
MaeIII	GTNAC	6 cut(s)	121, 148, 281, 377, 385, 884
MalI	GATC	1 cut(s)	917
MboI	GATC	1 cut(s)	915
MfeI	CAATTG	1 cut(s)	570
MhlI	GDGCHC	1 cut(s)	327
MlsI	TGGCCA	1 cut(s)	906
MluCI	AATT	6 cut(s)	105, 339, 419, 570, 688, 766
MluNI	TGGCCA	1 cut(s)	906
MmeI	TCCRAC	1 cut(s)	252
Mox20I	TGGCCA	1 cut(s)	906
MroNI	GCCGGC	2 cut(s)	137, 158
MscI	TGGCCA	1 cut(s)	906
MseI	TTAA	1 cut(s)	963
Msp20I	TGGCCA	1 cut(s)	906
MspA1I	CMGCKG	1 cut(s)	155
MspI	CCGG	4 cut(s)	138, 159, 335, 924
MspR9I	CCNGG	4 cut(s)	335, 336, 738, 860
MunI	CAATTG	1 cut(s)	570
MvaI	CCWGG	2 cut(s)	738, 860
MvnI	CGCG	1 cut(s)	317
MwoI	GCNNNNNNNGC	3 cut(s)	168, 314, 713
NaeI	GCCGGC	2 cut(s)	139, 160
NciI	CCSGG	2 cut(s)	335, 336
NcoI	CCATGG	1 cut(s)	492
NdeII	GATC	1 cut(s)	915
NgoMIV	GCCGGC	2 cut(s)	137, 158
NlaIII	CATG	7 cut(s)	90, 193, 236, 496, 712, 806, 914
NlaIV	GGNNCC	1 cut(s)	819
NmuCI	GTSAC	6 cut(s)	121, 148, 281, 377, 385, 884
NsbI	TGCGCA	1 cut(s)	352
NspI	RCATGY	1 cut(s)	90
PaeR7I	CTCGAG	1 cut(s)	320
PagI	TCATGA	1 cut(s)	910
PaqCI	CACCTGC	2 cut(s)	338, 939
PciI	ACATGT	1 cut(s)	86
PcsI	WCGNNNNNNNCGW	2 cut(s)	201, 297
PdiI	GCCGGC	2 cut(s)	139, 160
PfeI	GAWTC	3 cut(s)	53, 657, 970
PflFI	GACNNNGTC	1 cut(s)	383
PflMI	CCANNNNNTGG	1 cut(s)	493
PkrI	GCNGC	1 cut(s)	157
PpuMI	RGGWCCY	1 cut(s)	817
PscI	ACATGT	1 cut(s)	86
PshAI	GACNNNNGTC	1 cut(s)	442
Psp124BI	GAGCTC	1 cut(s)	327
Psp5II	RGGWCCY	1 cut(s)	817
Psp6I	CCWGG	2 cut(s)	736, 858
PspGI	CCWGG	2 cut(s)	736, 858
PspN4I	GGNNCC	1 cut(s)	819
PspPI	GGNCC	2 cut(s)	401, 817
PspPPI	RGGWCCY	1 cut(s)	817
PspXI	VCTCGAGB	1 cut(s)	320
PsyI	GACNNNGTC	1 cut(s)	383
RsaI	GTAC	1 cut(s)	848
RsaNI	GTAC	1 cut(s)	847
SacI	GAGCTC	1 cut(s)	327
SaqAI	TTAA	1 cut(s)	963
SatI	GCNGC	1 cut(s)	156
Sau3AI	GATC	1 cut(s)	915
Sau96I	GGNCC	2 cut(s)	401, 817
ScrFI	CCNGG	4 cut(s)	335, 336, 738, 860
SduI	GDGCHC	1 cut(s)	327
SfaNI	GCATC	3 cut(s)	191, 454, 946
Sfr274I	CTCGAG	1 cut(s)	320
SinI	GGWCC	1 cut(s)	817
SlaI	CTCGAG	1 cut(s)	320
SmaI	CCCGGG	1 cut(s)	336
SmlI	CTYRAG	1 cut(s)	320
SmoI	CTYRAG	1 cut(s)	320
Sse9I	AATT	6 cut(s)	105, 339, 419, 570, 688, 766
SsiI	CCGC	4 cut(s)	153, 169, 315, 399
SspMI	CTAG	1 cut(s)	449
SstI	GAGCTC	1 cut(s)	327
StyD4I	CCNGG	4 cut(s)	333, 334, 736, 858
StyI	CCWWGG	2 cut(s)	456, 492
TaaI	ACNGT	1 cut(s)	121
TaiI	ACGT	1 cut(s)	729
TaqI	TCGA	4 cut(s)	195, 291, 321, 537
TaqII	GACCGA	1 cut(s)	872
TasI	AATT	6 cut(s)	105, 339, 419, 570, 688, 766
TatI	WGTACW	1 cut(s)	846
TfiI	GAWTC	3 cut(s)	53, 657, 970
Tru1I	TTAA	1 cut(s)	963
Tru9I	TTAA	1 cut(s)	963
TseFI	GTSAC	6 cut(s)	121, 148, 281, 377, 385, 884
TseI	GCWGC	1 cut(s)	155
Tsp45I	GTSAC	6 cut(s)	121, 148, 281, 377, 385, 884
TspDTI	ATGAA	2 cut(s)	208, 662
TspGWI	ACGGA	2 cut(s)	202, 293
TspMI	CCCGGG	1 cut(s)	334
Tth111I	GACNNNGTC	1 cut(s)	383
Van91I	CCANNNNNTGG	1 cut(s)	493
VpaK11BI	GGWCC	1 cut(s)	817
XapI	RAATTY	1 cut(s)	766
XceI	RCATGY	1 cut(s)	90
XhoI	CTCGAG	1 cut(s)	320
XmaI	CCCGGG	1 cut(s)	334
XspI	CTAG	1 cut(s)	449
ZraI	GACGTC	1 cut(s)	727

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.