Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0003752

Physical Location & Seq

Genomic Coordinates Forward (+)

15060993 .. 15061973

Gene Structure 981 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G178700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 981 bp

ATGGCTCTTCCAGTACTTCTTCTCCTTCTCTTCATCACAATCCCCTTCTCAGAATCCAAACTCTCCATGGAATACTACAAAAAAACATGCCCCGATTTCGAAAGCATTGTACGTGACACCGTGAGCTTAAAACAAATGGCCAACCCCACCACCGCCGCCGGCACTCTCCGCCTCTTCTTCCACGACTGCATGGTCGAAGGCTGCGACGCCTCCATTCTCATCTCCTCCAACCACATCAACATCGCAGAGCGCGATGCCGACATCAACCAATCCCTCTCCGGGGACGCCTTGGAGGTCGTGGCACTTGCCAAGACCGCCCTTGAGCTCACCTGCCCAGGCATTGTCTCCTGCTCCGACATCCTCGCCATAGCCACACGCGACCTCGTCACCATGGTTGGAGGCCCATTTTACAACGTCCGCTTGGGACGAAAAGACGGAAAGGTTTCTCAAGCTTCAAGAGTGGAAGCCAATCTCATCAGAAGCAACCGAACCATGGAGGACATCATCAACTACTTCGCGGTTAAAGGCTTCACGATCGAAGAGATGGTGGCTTTGAGTGGTGGACACACAATTGGATTCTCCCATTGCAAAGAATTTGCGGATAGAATTTTCAATTACAACAGAACCACACCAACAGATCCTGAAATGTACCCAAACTTTGCCGAAGGGCTGAAGAAAACTTGTACCAACTATCAAACGAACACCGCAATGTCTGCTTTCAATGACGTGATTACCCCGGGGAAGTTTGACAATATGTATTTTCTGAATCTAAAGAGAGGGTTGGGGCTGTTGTCTTCGGACCATGCACTTGTTAAGGACCCAAGGACGAGGCCGTTTGTGGACTTGTACGCTGCCGACCAGGATGCTTTCTTCAAGGCTTTTGCTCATGCGATGGAGAAGCTTGCCCATCAGGGAGTTAAGACTGGTCGCAAGGGTGAGGTCAGGCACAGGTGTGATGCGTTCAACTTCATTCAGGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0009044 GO:0016787 GO:0016798 GO:0097599

KEGG Pathways

Metabolic & Signaling

ko00940 ko01100 ko01110 map00940 map01100 map01110

Pfam Domains

Protein Families

peroxidase

Protein Analysis

327

Amino Acids

36.17

Weight (kDa)

6.45

Isoelectric Point (pI)

32.19

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003752)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G17690 AT5G47000
fragaria_vesca	FvH4_5g16450
malus_domestica	MD06G1180500.v1.1 MD06G1180700.v1.1 MD14G1185700.v1.1
prunus_persica	Prupe.5G178600_v2.0.a1 Prupe.5G178700_v2.0.a1
pyrus_communis	pycom14g15460 pycom14g15470
rosa_chinensis	RchiOBHm_Chr7g0179641 RchiOBHm_Chr7g0179651
rosa_laevigata	RLG00000005333 RLG00000005334 RLG00000018713
rosa_multiflora	Rmu_sc0005329.1_g000029 Rmu_sc0005329.1_g000030
rosa_roxburghii	Rroxscaffold_155G00443830 Rroxscaffold_155G00443840 Rroxscaffold_3G00273560
rosa_rugosa	Rorug06G0426900 Rorug06G0427200
rosa_samantha	Rh2AG300900 Rh2DG325100 Rh7AG026400 Rh7AG026600 Rh7BG025500 Rh7BG025600 Rh7CG027600 Rh7CG027800 Rh7DG027200 Rh7DG027300
rosa_wichuraiana	Rw7G002120 Rw7G002130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	338
AasI	GACNNNNNNGTC	1 cut(s)	191
Acc36I	ACCTGC	1 cut(s)	338
AccII	CGCG	3 cut(s)	252, 378, 518
AciI	CCGC	8 cut(s)	153, 156, 169, 315, 418, 518, 599, 705
AclWI	GGATC	1 cut(s)	632
AcoI	YGGCCR	1 cut(s)	138
AcsI	RAATTY	2 cut(s)	593, 606
AcuI	CTGAAG	1 cut(s)	692
AcyI	GRCGYC	2 cut(s)	207, 285
AfaI	GTAC	5 cut(s)	15, 111, 650, 685, 848
AfiI	CCNNNNNNNGG	3 cut(s)	279, 280, 493
AgsI	TTSAA	5 cut(s)	456, 613, 721, 874, 964
AjiI	CACGTC	1 cut(s)	727
AjnI	CCWGG	2 cut(s)	334, 858
AleI	CACNNNNGTG	1 cut(s)	951
AluBI	AGCT	4 cut(s)	126, 325, 452, 901
AluI	AGCT	4 cut(s)	126, 325, 452, 901
Alw21I	GWGCWC	1 cut(s)	327
Alw26I	GTCTC	1 cut(s)	349
AlwI	GGATC	1 cut(s)	632
AlwNI	CAGNNNCTG	1 cut(s)	641
Ama87I	CYCGRG	1 cut(s)	736
AoxI	GGCC	3 cut(s)	138, 400, 830
ApeKI	GCWGC	2 cut(s)	201, 851
ApoI	RAATTY	2 cut(s)	593, 606
Asp700I	GAANNNNTTC	1 cut(s)	442
AspLEI	GCGC	1 cut(s)	252
AspS9I	GGNCC	3 cut(s)	401, 799, 817
AsuC2I	CCSGG	3 cut(s)	280, 737, 738
AsuHPI	GGTGA	3 cut(s)	319, 379, 947
AsuII	TTCGAA	1 cut(s)	99
AvaI	CYCGRG	1 cut(s)	736
AvaII	GGWCC	2 cut(s)	799, 817
BalI	TGGCCA	1 cut(s)	140
BanII	GRGCYC	1 cut(s)	327
BbsI	GAAGAC	1 cut(s)	786
Bbv12I	GWGCWC	1 cut(s)	327
BbvI	GCAGC	2 cut(s)	188, 838
BccI	CCATC	3 cut(s)	538, 886, 915
BceAI	ACGGC	1 cut(s)	817
BcgI	CGANNNNNNTGC	2 cut(s)	845, 879
BciT130I	CCWGG	2 cut(s)	336, 860
BcnI	CCSGG	3 cut(s)	280, 737, 738
BcoDI	GTCTC	1 cut(s)	349
BfuAI	ACCTGC	1 cut(s)	338
BisI	GCNGC	3 cut(s)	156, 202, 852
BlsI	GCNGC	3 cut(s)	157, 203, 853
BmcAI	AGTACT	1 cut(s)	15
Bme1390I	CCNGG	5 cut(s)	280, 336, 737, 738, 860
Bme18I	GGWCC	2 cut(s)	799, 817
BmeT110I	CYCGRG	1 cut(s)	736
BmgBI	CACGTC	1 cut(s)	727
BmgT120I	GGNCC	3 cut(s)	401, 799, 817
BmiI	GGNNCC	1 cut(s)	819
BmrFI	CCNGG	5 cut(s)	280, 336, 737, 738, 860
BmsI	GCATC	3 cut(s)	244, 853, 946
BpiI	GAAGAC	1 cut(s)	786
Bpu14I	TTCGAA	1 cut(s)	99
BpuEI	CTTGAG	2 cut(s)	341, 432
BpuMI	CCSGG	3 cut(s)	280, 737, 738
BsaAI	YACGTR	1 cut(s)	113
BsaHI	GRCGYC	2 cut(s)	207, 285
BsaXI	ACNNNNNCTCC	2 cut(s)	6, 36
Bsc4I	CCNNNNNNNGG	3 cut(s)	279, 280, 493
Bse118I	RCCGGY	1 cut(s)	158
Bse1I	ACTGG	2 cut(s)	11, 928
Bse3DI	GCAATG	2 cut(s)	583, 714
BseBI	CCWGG	2 cut(s)	336, 860
BseGI	GGATG	2 cut(s)	357, 868
BseLI	CCNNNNNNNGG	3 cut(s)	279, 280, 493
BseMI	GCAATG	2 cut(s)	583, 714
BseMII	CTCAG	1 cut(s)	63
BseNI	ACTGG	2 cut(s)	11, 928
BseRI	GAGGAG	1 cut(s)	214
BseXI	GCAGC	2 cut(s)	188, 838
Bsh1236I	CGCG	3 cut(s)	252, 378, 518
Bsh1285I	CGRYCG	1 cut(s)	537
BshFI	GGCC	3 cut(s)	140, 402, 832
BsiEI	CGRYCG	1 cut(s)	537
BsiHKAI	GWGCWC	1 cut(s)	327
BsiHKCI	CYCGRG	1 cut(s)	736
BsiSI	CCGG	3 cut(s)	159, 279, 737
BslFI	GGGAC	2 cut(s)	296, 438
BslI	CCNNNNNNNGG	3 cut(s)	279, 280, 493
BsmAI	GTCTC	1 cut(s)	349
BsmFI	GGGAC	2 cut(s)	296, 438
BsnI	GGCC	3 cut(s)	140, 402, 832
BsoBI	CYCGRG	1 cut(s)	736
Bsp119I	TTCGAA	1 cut(s)	99
Bsp1286I	GDGCHC	1 cut(s)	327
Bsp143I	GATC	2 cut(s)	534, 637
Bsp19I	CCATGG	3 cut(s)	66, 390, 492
BspACI	CCGC	8 cut(s)	153, 156, 169, 315, 418, 518, 599, 705
BspANI	GGCC	3 cut(s)	140, 402, 832
BspCNI	CTCAG	1 cut(s)	62
BspFNI	CGCG	3 cut(s)	252, 378, 518
BspLI	GGNNCC	1 cut(s)	819
BspMI	ACCTGC	1 cut(s)	338
BspPI	GGATC	1 cut(s)	632
BspQI	GCTCTTC	1 cut(s)	12
BspT104I	TTCGAA	1 cut(s)	99
BsrDI	GCAATG	2 cut(s)	583, 714
BsrFI	RCCGGY	1 cut(s)	158
BsrI	ACTGG	2 cut(s)	11, 928
BssAI	RCCGGY	1 cut(s)	158
BssMI	GATC	2 cut(s)	534, 637
BssNI	GRCGYC	2 cut(s)	207, 285
BssT1I	CCWWGG	5 cut(s)	66, 288, 390, 492, 821
Bst2UI	CCWGG	2 cut(s)	336, 860
Bst4CI	ACNGT	1 cut(s)	121
Bst6I	CTCTTC	4 cut(s)	12, 35, 179, 534
BstACI	GRCGYC	2 cut(s)	207, 285
BstAPI	GCANNNNNTGC	1 cut(s)	713
BstBAI	YACGTR	1 cut(s)	113
BstBI	TTCGAA	1 cut(s)	99
BstC8I	GCNNGC	2 cut(s)	160, 903
BstDEI	CTNAG	2 cut(s)	49, 978
BstDSI	CCRYGG	3 cut(s)	66, 390, 492
BstF5I	GGATG	2 cut(s)	357, 868
BstFNI	CGCG	3 cut(s)	252, 378, 518
BstHHI	GCGC	1 cut(s)	252
BstKTI	GATC	2 cut(s)	537, 640
BstMAI	GTCTC	1 cut(s)	349
BstMBI	GATC	2 cut(s)	534, 637
BstMCI	CGRYCG	1 cut(s)	537
BstMWI	GCNNNNNNNGC	3 cut(s)	168, 314, 713
BstNI	CCWGG	2 cut(s)	336, 860
BstNSI	RCATGY	1 cut(s)	90
BstSCI	CCNGG	5 cut(s)	278, 334, 735, 736, 858
BstUI	CGCG	3 cut(s)	252, 378, 518
BstV1I	GCAGC	2 cut(s)	188, 838
BstV2I	GAAGAC	1 cut(s)	786
BstX2I	RGATCY	1 cut(s)	637
BstYI	RGATCY	1 cut(s)	637
BsuRI	GGCC	3 cut(s)	140, 402, 832
BtgI	CCRYGG	3 cut(s)	66, 390, 492
BtgZI	GCGATG	3 cut(s)	226, 267, 905
BtrI	CACGTC	1 cut(s)	727
BtsCI	GGATG	2 cut(s)	357, 868
BveI	ACCTGC	1 cut(s)	338
Cac8I	GCNNGC	2 cut(s)	160, 903
CaiI	CAGNNNCTG	1 cut(s)	641
CfoI	GCGC	1 cut(s)	252
Cfr10I	RCCGGY	1 cut(s)	158
Cfr13I	GGNCC	3 cut(s)	401, 799, 817
Cfr9I	CCCGGG	1 cut(s)	736
CseI	GACGC	2 cut(s)	215, 293
Csp6I	GTAC	5 cut(s)	14, 110, 649, 684, 847
CviAII	CATG	7 cut(s)	67, 87, 190, 391, 493, 803, 887
CviQI	GTAC	5 cut(s)	14, 110, 649, 684, 847
DdeI	CTNAG	2 cut(s)	49, 978
DpnI	GATC	2 cut(s)	536, 639
DpnII	GATC	2 cut(s)	534, 637
DrdI	GACNNNNNNGTC	1 cut(s)	191
DseDI	GACNNNNNNGTC	1 cut(s)	191
EaeI	YGGCCR	1 cut(s)	138
Eam1104I	CTCTTC	4 cut(s)	12, 35, 179, 534
EarI	CTCTTC	4 cut(s)	12, 35, 179, 534
EciI	GGCGGA	1 cut(s)	158
Ecl136II	GAGCTC	1 cut(s)	325
Eco130I	CCWWGG	5 cut(s)	66, 288, 390, 492, 821
Eco24I	GRGCYC	1 cut(s)	327
Eco47I	GGWCC	2 cut(s)	799, 817
Eco53kI	GAGCTC	1 cut(s)	325
Eco57I	CTGAAG	1 cut(s)	692
Eco88I	CYCGRG	1 cut(s)	736
EcoICRI	GAGCTC	1 cut(s)	325
EcoO109I	RGGNCCY	1 cut(s)	817
EcoRII	CCWGG	2 cut(s)	334, 858
EcoT14I	CCWWGG	5 cut(s)	66, 288, 390, 492, 821
EcoT38I	GRGCYC	1 cut(s)	327
ErhI	CCWWGG	5 cut(s)	66, 288, 390, 492, 821
FaeI	CATG	7 cut(s)	70, 90, 193, 394, 496, 806, 890
FaiI	YATR	9 cut(s)	68, 88, 191, 368, 392, 494, 755, 804, 888
FaqI	GGGAC	2 cut(s)	296, 438
FatI	CATG	7 cut(s)	66, 86, 189, 390, 492, 802, 886
Fnu4HI	GCNGC	3 cut(s)	156, 202, 852
FokI	GGATG	2 cut(s)	344, 875
FriOI	GRGCYC	1 cut(s)	327
Fsp4HI	GCNGC	3 cut(s)	156, 202, 852
GlaI	GCGC	1 cut(s)	251
GluI	GCNGC	3 cut(s)	156, 202, 852
HaeIII	GGCC	3 cut(s)	140, 402, 832
HapII	CCGG	3 cut(s)	159, 279, 737
HgaI	GACGC	2 cut(s)	215, 293
HhaI	GCGC	1 cut(s)	252
Hin1I	GRCGYC	2 cut(s)	207, 285
Hin1II	CATG	7 cut(s)	70, 90, 193, 394, 496, 806, 890
Hin6I	GCGC	1 cut(s)	250
HinP1I	GCGC	1 cut(s)	250
HindIII	AAGCTT	2 cut(s)	450, 899
HinfI	GANTC	3 cut(s)	53, 576, 766
HpaII	CCGG	3 cut(s)	159, 279, 737
HphI	GGTGA	3 cut(s)	319, 379, 947
Hpy166II	GTNNAC	2 cut(s)	563, 841
Hpy188I	TCNGA	5 cut(s)	52, 355, 479, 765, 799
Hpy188III	TCNNGA	3 cut(s)	456, 532, 641
Hpy8I	GTNNAC	2 cut(s)	563, 841
Hpy99I	CGWCG	1 cut(s)	209
HpyAV	CCTTC	4 cut(s)	35, 55, 191, 659
HpyCH4III	ACNGT	1 cut(s)	121
HpyCH4IV	ACGT	3 cut(s)	112, 414, 726
HpyCH4V	TGCA	3 cut(s)	189, 588, 806
HpyF10VI	GCNNNNNNNGC	3 cut(s)	168, 314, 713
HpyF3I	CTNAG	2 cut(s)	49, 978
HpySE526I	ACGT	3 cut(s)	112, 414, 726
Hsp92I	GRCGYC	2 cut(s)	207, 285
Hsp92II	CATG	7 cut(s)	70, 90, 193, 394, 496, 806, 890
HspAI	GCGC	1 cut(s)	250
KroI	GCCGGC	1 cut(s)	158
KroNI	GCCGGC	1 cut(s)	160
Kzo9I	GATC	2 cut(s)	534, 637
LguI	GCTCTTC	1 cut(s)	12
LmnI	GCTCC	1 cut(s)	356
Lsp1109I	GCAGC	2 cut(s)	188, 838
LweI	GCATC	3 cut(s)	244, 853, 946
MaeII	ACGT	3 cut(s)	112, 414, 726
MaeIII	GTNAC	2 cut(s)	113, 385
MalI	GATC	2 cut(s)	536, 639
MboI	GATC	2 cut(s)	534, 637
MboII	GAAGA	8 cut(s)	11, 22, 166, 169, 551, 685, 786, 862
MfeI	CAATTG	1 cut(s)	570
MflI	RGATCY	1 cut(s)	637
MhlI	GDGCHC	1 cut(s)	327
MlsI	TGGCCA	1 cut(s)	140
MluCI	AATT	4 cut(s)	570, 593, 606, 613
MluNI	TGGCCA	1 cut(s)	140
MmeI	TCCRAC	3 cut(s)	252, 376, 378
Mox20I	TGGCCA	1 cut(s)	140
MroNI	GCCGGC	1 cut(s)	158
MroXI	GAANNNNTTC	1 cut(s)	442
MscI	TGGCCA	1 cut(s)	140
MseI	TTAA	4 cut(s)	128, 522, 813, 918
MslI	CAYNNNNRTG	2 cut(s)	707, 951
Msp20I	TGGCCA	1 cut(s)	140
MspI	CCGG	3 cut(s)	159, 279, 737
MspR9I	CCNGG	5 cut(s)	280, 336, 737, 738, 860
MunI	CAATTG	1 cut(s)	570
MvaI	CCWGG	2 cut(s)	336, 860
MvnI	CGCG	3 cut(s)	252, 378, 518
MwoI	GCNNNNNNNGC	3 cut(s)	168, 314, 713
NaeI	GCCGGC	1 cut(s)	160
NciI	CCSGG	3 cut(s)	280, 737, 738
NcoI	CCATGG	3 cut(s)	66, 390, 492
NdeII	GATC	2 cut(s)	534, 637
NgoMIV	GCCGGC	1 cut(s)	158
NlaIII	CATG	7 cut(s)	70, 90, 193, 394, 496, 806, 890
NlaIV	GGNNCC	1 cut(s)	819
NmuCI	GTSAC	2 cut(s)	113, 385
NspI	RCATGY	1 cut(s)	90
NspV	TTCGAA	1 cut(s)	99
OliI	CACNNNNGTG	1 cut(s)	951
PaqCI	CACCTGC	1 cut(s)	338
PciSI	GCTCTTC	1 cut(s)	12
PcsI	WCGNNNNNNNCGW	2 cut(s)	201, 249
PdiI	GCCGGC	1 cut(s)	160
PdmI	GAANNNNTTC	1 cut(s)	442
PfeI	GAWTC	3 cut(s)	53, 576, 766
PflFI	GACNNNGTC	1 cut(s)	383
PkrI	GCNGC	3 cut(s)	157, 203, 853
Ple19I	CGATCG	1 cut(s)	537
Ppu21I	YACGTR	1 cut(s)	113
PpuMI	RGGWCCY	1 cut(s)	817
Psp124BI	GAGCTC	1 cut(s)	327
Psp5II	RGGWCCY	1 cut(s)	817
Psp6I	CCWGG	2 cut(s)	334, 858
PspGI	CCWGG	2 cut(s)	334, 858
PspN4I	GGNNCC	1 cut(s)	819
PspPI	GGNCC	3 cut(s)	401, 799, 817
PspPPI	RGGWCCY	1 cut(s)	817
PstNI	CAGNNNCTG	1 cut(s)	641
PsuI	RGATCY	1 cut(s)	637
PsyI	GACNNNGTC	1 cut(s)	383
PvuI	CGATCG	1 cut(s)	537
RsaI	GTAC	5 cut(s)	15, 111, 650, 685, 848
RsaNI	GTAC	5 cut(s)	14, 110, 649, 684, 847
RseI	CAYNNNNRTG	2 cut(s)	707, 951
SacI	GAGCTC	1 cut(s)	327
SapI	GCTCTTC	1 cut(s)	12
SaqAI	TTAA	4 cut(s)	128, 522, 813, 918
SatI	GCNGC	3 cut(s)	156, 202, 852
Sau3AI	GATC	2 cut(s)	534, 637
Sau96I	GGNCC	3 cut(s)	401, 799, 817
ScaI	AGTACT	1 cut(s)	15
ScrFI	CCNGG	5 cut(s)	280, 336, 737, 738, 860
SduI	GDGCHC	1 cut(s)	327
SfaNI	GCATC	3 cut(s)	244, 853, 946
SfuI	TTCGAA	1 cut(s)	99
SinI	GGWCC	2 cut(s)	799, 817
SmaI	CCCGGG	1 cut(s)	738
SmiMI	CAYNNNNRTG	2 cut(s)	707, 951
SmlI	CTYRAG	2 cut(s)	320, 447
SmoI	CTYRAG	2 cut(s)	320, 447
Sse9I	AATT	4 cut(s)	570, 593, 606, 613
SsiI	CCGC	8 cut(s)	153, 156, 169, 315, 418, 518, 599, 705
SstI	GAGCTC	1 cut(s)	327
StyD4I	CCNGG	5 cut(s)	278, 334, 735, 736, 858
StyI	CCWWGG	5 cut(s)	66, 288, 390, 492, 821
TaaI	ACNGT	1 cut(s)	121
TaiI	ACGT	3 cut(s)	115, 417, 729
TaqI	TCGA	3 cut(s)	99, 195, 537
TasI	AATT	4 cut(s)	570, 593, 606, 613
TatI	WGTACW	1 cut(s)	13
TauI	GCSGC	1 cut(s)	158
TfiI	GAWTC	3 cut(s)	53, 576, 766
Tru1I	TTAA	4 cut(s)	128, 522, 813, 918
Tru9I	TTAA	4 cut(s)	128, 522, 813, 918
TseFI	GTSAC	2 cut(s)	113, 385
TseI	GCWGC	2 cut(s)	201, 851
Tsp45I	GTSAC	2 cut(s)	113, 385
TspDTI	ATGAA	2 cut(s)	22, 958
TspGWI	ACGGA	1 cut(s)	450
TspMI	CCCGGG	1 cut(s)	736
Tth111I	GACNNNGTC	1 cut(s)	383
VpaK11BI	GGWCC	2 cut(s)	799, 817
XapI	RAATTY	2 cut(s)	593, 606
XceI	RCATGY	1 cut(s)	90
XcmI	CCANNNNNNNNNTGG	1 cut(s)	64
XmaI	CCCGGG	1 cut(s)	736
XmnI	GAANNNNTTC	1 cut(s)	442
ZrmI	AGTACT	1 cut(s)	15

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.