Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0007835

Physical Location & Seq

Genomic Coordinates Forward (+)

15781121 .. 15784825

Gene Structure 3705 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G193500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1500 bp

ATGCCAGAAAAGAGTAGGCTTCCCTCAAAATTTCTTTTCTACTTGATAACAGTTTCTGTGTTCCTTTTAATCCTTTCTTCTGTCTTCCTACTTCAATTTAGCAAAACTTCTTTTACACCCAGTTCAGTGTTTAAGCTTATTCTTGTTAATGGTACATCAGTGTACTTTGAGCCCCTTGTAAAAAGTAGGCAGAAACAACTTCCTTTCCTGTCCTCTGAGGTTTCCCGAGTTGATGCTATAAGATCCTCAAAAAGAAGTGAATTGGCCTGTCAAGTTTCCAATTCAAGCAAGAAATTGGGATCTTTAAGGAAAATGAAAACTATGGCCTGTGATTCAACTCAGGCACTCTTGAGGGTGTTCATGTATGAGTTGCCTCCTGAATTTCACTTTGGGCTTTTGGGTTGGAAGGGAAAGGAGAATCAAACATGGCCAAATGTCAGTATCTCAAGTCGCATCCCACCTTACCCAGGTGGCCTGAATTTACAGCACAGTATCGAATACTGGCTCACCCTTGATCTTCTGGCCTCAAATATCCCAACTGTGGTCAGACCTTGCACGGTAGTTAGGGTGCACAATTCAAGCGAAGCAGATGTTATTTTTGTGCCATTCTTCTCATCTCTGAGTTACAACAGGCATTCCAAGCTCCATGGAAAGGAGAAAGTCAGTGTCAACAAGATGTTGCAGAACAAATTGGTGCAGTTTTTGAAAGGTCGGGATGAATGGAAAAGAAAGGGTGGGAAGGATCATTTGATAGTTGCTCACCATCCAAATAGCATGTTGGATGCAAGAAGGAAATTGGGCTCTGCCATGTTTGTGCTTGCAGATTTTGGAAGATACCCAGCTGAAATAGCAAATCTTGAGAAGGATGTAATTGCTCCTTACAGACATGTGGTGCTGACTGTTGACAGCAGCAAATCAGCCTCATTTGAGGAACGTCCTATACTATTATATTTCCGAGGAGCCATATACAGAAAAGATGGAGGAGTAATTCGCCAGGAATTGTATTATATTCTCAAAGATGAGAAAGATGTACACTTCAGTTTTGGTAGTGTTCAAGGAAATGGTATTAACAAGGCAAGCCAAGGAATGGCCTCATCAAAGTTTTGCCTCAATATTGCTGGTGATACCCCTTCCTCAAATCGCCTATTTGATGCTATTGCTAGTCATTGTGTCCCTGTGATTATTAGTGATGAGATTGAGCTACCATTTGAAGAGGTCTTAGACTACTCAGAGTTTTGCATATTTGTTCACGCGTCTGATGCTGTTAAGAAGGGTTACCTACTGAATCTTCTTCAAGGAATCAAGCAAGACAAGTGGACCAAGATGTGGGAAAGGTTGAAGGAAATTGTACATCAATTCGAATATCAGTATCCATCCCAGCCTGGTGATGCCGTTGATATGATTTGGCAAGCAGTTTCTCATAAAATATCCTCTATACAGCTTAAATTTCACAGAAAGAAGAGATATGACAGGTCAACTTCTGGTATAATAACGAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Exostosin

Protein Analysis

500

Amino Acids

56.79

Weight (kDa)

9.52

Isoelectric Point (pI)

48.49

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007835)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G74680
fragaria_vesca	FvH4_5g14940 FvH4_5g14940 FvH4_5g14940
malus_domestica	MD06G1193300.v1.1 MD14G1200400.v1.1
prunus_persica	Prupe.5G193500_v2.0.a1
pyrus_communis	pycom06g17140 pycom14g16610
rosa_chinensis	RchiOBHm_Chr7g0181431
rosa_laevigata	RLG00000005194
rosa_multiflora	Rmu_sc0002060.1_g000019 Rmu_sc0004621.1_g000020
rosa_roxburghii	Rroxscaffold_3G00272010
rosa_rugosa	Rorug06G0440700 Rorug06G0440800 Rorug06G0440900 Rorug06G0441000 Rorug06G0441100
rosa_samantha	Rh7AG042900 Rh7BG042400 Rh7CG044200 Rh7DG042800
rosa_wichuraiana	Rw7G003580

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	1087, 1326
AccII	CGCG	1 cut(s)	1253
AclWI	GGATC	3 cut(s)	237, 307, 750
AcoI	YGGCCR	1 cut(s)	428
AcsI	RAATTY	4 cut(s)	29, 380, 478, 1445
AcuI	CTGAAG	1 cut(s)	1021
AfaI	GTAC	4 cut(s)	154, 164, 1032, 1350
AfiI	CCNNNNNNNGG	5 cut(s)	467, 541, 652, 1087, 1326
AflIII	ACRYGT	2 cut(s)	886, 1251
AgsI	TTSAA	9 cut(s)	95, 285, 336, 579, 706, 1055, 1211, 1295, 1339
AjnI	CCWGG	3 cut(s)	466, 993, 1381
AjuI	GAANNNNNNNTTGG	2 cut(s)	372, 404
AluBI	AGCT	5 cut(s)	136, 643, 842, 1201, 1441
AluI	AGCT	5 cut(s)	136, 643, 842, 1201, 1441
Alw21I	GWGCWC	1 cut(s)	573
Alw44I	GTGCAC	1 cut(s)	569
AlwI	GGATC	3 cut(s)	237, 307, 750
AlwNI	CAGNNNCTG	1 cut(s)	56
Ama87I	CYCGRG	1 cut(s)	225
AoxI	GGCC	6 cut(s)	264, 324, 428, 472, 522, 1089
ApaLI	GTGCAC	1 cut(s)	569
ApeKI	GCWGC	1 cut(s)	909
ApoI	RAATTY	4 cut(s)	29, 380, 478, 1445
AspS9I	GGNCC	1 cut(s)	1317
AsuHPI	GGTGA	4 cut(s)	499, 752, 1133, 1397
AsuII	TTCGAA	1 cut(s)	1359
AvaI	CYCGRG	1 cut(s)	225
AvaII	GGWCC	1 cut(s)	1317
BaeGI	GKGCMC	1 cut(s)	573
BaeI	ACNNNNGTAYC	2 cut(s)	144, 177
BalI	TGGCCA	1 cut(s)	430
BanII	GRGCYC	2 cut(s)	174, 803
BbsI	GAAGAC	1 cut(s)	76
Bbv12I	GWGCWC	1 cut(s)	573
BbvI	GCAGC	1 cut(s)	921
BccI	CCATC	3 cut(s)	771, 971, 1381
BceAI	ACGGC	1 cut(s)	1376
BciT130I	CCWGG	3 cut(s)	468, 995, 1383
BciVI	GTATCC	1 cut(s)	1380
BfaI	CTAG	1 cut(s)	1161
BfuI	GTATCC	1 cut(s)	1380
BisI	GCNGC	1 cut(s)	910
BlsI	GCNGC	1 cut(s)	911
Bme1390I	CCNGG	3 cut(s)	468, 995, 1383
Bme18I	GGWCC	1 cut(s)	1317
BmeT110I	CYCGRG	1 cut(s)	225
BmgT120I	GGNCC	1 cut(s)	1317
BmiI	GGNNCC	1 cut(s)	961
BmrFI	CCNGG	3 cut(s)	468, 995, 1383
BmrI	ACTGGG	1 cut(s)	114
BmsI	GCATC	6 cut(s)	223, 462, 772, 1141, 1249, 1378
BmuI	ACTGGG	1 cut(s)	114
BpiI	GAAGAC	1 cut(s)	76
Bpu14I	TTCGAA	1 cut(s)	1359
BpuEI	CTTGAG	3 cut(s)	370, 430, 878
BsaJI	CCNNGG	4 cut(s)	466, 646, 955, 1081
Bsc4I	CCNNNNNNNGG	5 cut(s)	467, 541, 652, 1087, 1326
Bse1I	ACTGG	2 cut(s)	120, 506
BseBI	CCWGG	3 cut(s)	468, 995, 1383
BseDI	CCNNGG	4 cut(s)	466, 646, 955, 1081
BseGI	GGATG	6 cut(s)	453, 721, 763, 787, 871, 1373
BseLI	CCNNNNNNNGG	5 cut(s)	467, 541, 652, 1087, 1326
BseMII	CTCAG	4 cut(s)	207, 353, 611, 1242
BseNI	ACTGG	2 cut(s)	120, 506
BseRI	GAGGAG	2 cut(s)	972, 996
BseSI	GKGCMC	1 cut(s)	573
BseXI	GCAGC	1 cut(s)	921
BseYI	CCCAGC	2 cut(s)	838, 1377
BsgI	GTGCAG	1 cut(s)	716
Bsh1236I	CGCG	1 cut(s)	1253
BshFI	GGCC	6 cut(s)	266, 326, 430, 474, 524, 1091
BsiHKAI	GWGCWC	1 cut(s)	573
BsiHKCI	CYCGRG	1 cut(s)	225
BslFI	GGGAC	1 cut(s)	1157
BslI	CCNNNNNNNGG	5 cut(s)	467, 541, 652, 1087, 1326
BsmFI	GGGAC	1 cut(s)	1157
BsmI	GAATGC	1 cut(s)	634
BsnI	GGCC	6 cut(s)	266, 326, 430, 474, 524, 1091
BsoBI	CYCGRG	1 cut(s)	225
Bsp119I	TTCGAA	1 cut(s)	1359
Bsp1286I	GDGCHC	3 cut(s)	174, 573, 803
Bsp1407I	TGTACA	2 cut(s)	1030, 1348
Bsp143I	GATC	4 cut(s)	242, 299, 514, 742
Bsp19I	CCATGG	1 cut(s)	646
BspANI	GGCC	6 cut(s)	266, 326, 430, 474, 524, 1091
BspCNI	CTCAG	4 cut(s)	208, 352, 612, 1241
BspFNI	CGCG	1 cut(s)	1253
BspLI	GGNNCC	1 cut(s)	961
BspPI	GGATC	3 cut(s)	237, 307, 750
BspT104I	TTCGAA	1 cut(s)	1359
BsrGI	TGTACA	2 cut(s)	1030, 1348
BsrI	ACTGG	2 cut(s)	120, 506
BssECI	CCNNGG	4 cut(s)	466, 646, 955, 1081
BssMI	GATC	4 cut(s)	242, 299, 514, 742
BssT1I	CCWWGG	2 cut(s)	646, 1081
Bst2UI	CCWGG	3 cut(s)	468, 995, 1383
Bst4CI	ACNGT	5 cut(s)	52, 491, 541, 559, 901
Bst6I	CTCTTC	2 cut(s)	1206, 1454
BstAUI	TGTACA	2 cut(s)	1030, 1348
BstBI	TTCGAA	1 cut(s)	1359
BstC8I	GCNNGC	3 cut(s)	819, 1078, 1410
BstDEI	CTNAG	5 cut(s)	216, 339, 620, 1219, 1228
BstDSI	CCRYGG	1 cut(s)	646
BstEII	GGTNACC	1 cut(s)	1274
BstENI	CCTNNNNNAGG	1 cut(s)	465
BstF5I	GGATG	6 cut(s)	453, 721, 763, 787, 871, 1373
BstFNI	CGCG	1 cut(s)	1253
BstKTI	GATC	4 cut(s)	245, 302, 517, 745
BstMBI	GATC	4 cut(s)	242, 299, 514, 742
BstMWI	GCNNNNNNNGC	3 cut(s)	640, 848, 1259
BstNI	CCWGG	3 cut(s)	468, 995, 1383
BstNSI	RCATGY	2 cut(s)	778, 890
BstPI	GGTNACC	1 cut(s)	1274
BstSCI	CCNGG	3 cut(s)	466, 993, 1381
BstSLI	GKGCMC	1 cut(s)	573
BstUI	CGCG	1 cut(s)	1253
BstV1I	GCAGC	1 cut(s)	921
BstV2I	GAAGAC	1 cut(s)	76
BstX2I	RGATCY	2 cut(s)	242, 299
BstYI	RGATCY	2 cut(s)	242, 299
BsuI	GTATCC	1 cut(s)	1380
BsuRI	GGCC	6 cut(s)	266, 326, 430, 474, 524, 1091
BtgI	CCRYGG	1 cut(s)	646
BtsCI	GGATG	6 cut(s)	453, 721, 763, 787, 871, 1373
BtsIMutI	CAGTG	3 cut(s)	132, 165, 670
Cac8I	GCNNGC	3 cut(s)	819, 1078, 1410
CaiI	CAGNNNCTG	1 cut(s)	56
Cfr13I	GGNCC	1 cut(s)	1317
CseI	GACGC	1 cut(s)	1242
Csp6I	GTAC	4 cut(s)	153, 163, 1031, 1349
CspCI	CAANNNNNGTGG	2 cut(s)	1295, 1330
CviAII	CATG	6 cut(s)	361, 426, 647, 775, 808, 887
CviQI	GTAC	4 cut(s)	153, 163, 1031, 1349
DdeI	CTNAG	5 cut(s)	216, 339, 620, 1219, 1228
DpnI	GATC	4 cut(s)	244, 301, 516, 744
DpnII	GATC	4 cut(s)	242, 299, 514, 742
EaeI	YGGCCR	1 cut(s)	428
Eam1104I	CTCTTC	2 cut(s)	1206, 1454
EarI	CTCTTC	2 cut(s)	1206, 1454
Eco130I	CCWWGG	2 cut(s)	646, 1081
Eco24I	GRGCYC	2 cut(s)	174, 803
Eco47I	GGWCC	1 cut(s)	1317
Eco57I	CTGAAG	1 cut(s)	1021
Eco88I	CYCGRG	1 cut(s)	225
Eco91I	GGTNACC	1 cut(s)	1274
EcoNI	CCTNNNNNAGG	1 cut(s)	465
EcoO65I	GGTNACC	1 cut(s)	1274
EcoRII	CCWGG	3 cut(s)	466, 993, 1381
EcoT14I	CCWWGG	2 cut(s)	646, 1081
EcoT38I	GRGCYC	2 cut(s)	174, 803
ErhI	CCWWGG	2 cut(s)	646, 1081
FaeI	CATG	6 cut(s)	364, 429, 650, 778, 811, 890
FaqI	GGGAC	1 cut(s)	1157
FatI	CATG	6 cut(s)	360, 425, 646, 774, 807, 886
Fnu4HI	GCNGC	1 cut(s)	910
FokI	GGATG	6 cut(s)	440, 728, 750, 794, 878, 1360
FriOI	GRGCYC	2 cut(s)	174, 803
Fsp4HI	GCNGC	1 cut(s)	910
FspBI	CTAG	1 cut(s)	1161
GluI	GCNGC	1 cut(s)	910
GsaI	CCCAGC	2 cut(s)	842, 1381
HaeIII	GGCC	6 cut(s)	266, 326, 430, 474, 524, 1091
HgaI	GACGC	1 cut(s)	1242
Hin1II	CATG	6 cut(s)	364, 429, 650, 778, 811, 890
HincII	GTYRAC	3 cut(s)	670, 904, 1476
HindII	GTYRAC	3 cut(s)	670, 904, 1476
HindIII	AAGCTT	1 cut(s)	134
HinfI	GANTC	4 cut(s)	332, 418, 1285, 1299
HphI	GGTGA	4 cut(s)	499, 752, 1133, 1397
Hpy166II	GTNNAC	8 cut(s)	163, 571, 670, 904, 1033, 1249, 1317, 1476
Hpy188I	TCNGA	6 cut(s)	217, 548, 621, 956, 1231, 1258
Hpy188III	TCNNGA	5 cut(s)	225, 349, 377, 713, 857
Hpy8I	GTNNAC	8 cut(s)	163, 571, 670, 904, 1033, 1249, 1317, 1476
HpyAV	CCTTC	7 cut(s)	400, 733, 783, 856, 1140, 1264, 1333
HpyCH4III	ACNGT	5 cut(s)	52, 491, 541, 559, 901
HpyCH4IV	ACGT	1 cut(s)	934
HpyCH4V	TGCA	7 cut(s)	555, 571, 682, 697, 785, 821, 1239
HpyF10VI	GCNNNNNNNGC	3 cut(s)	640, 848, 1259
HpyF3I	CTNAG	5 cut(s)	216, 339, 620, 1219, 1228
HpySE526I	ACGT	1 cut(s)	934
Hsp92II	CATG	6 cut(s)	364, 429, 650, 778, 811, 890
Kzo9I	GATC	4 cut(s)	242, 299, 514, 742
LmnI	GCTCC	3 cut(s)	648, 880, 959
Lsp1109I	GCAGC	1 cut(s)	921
LweI	GCATC	6 cut(s)	223, 462, 772, 1141, 1249, 1378
MaeI	CTAG	1 cut(s)	1161
MaeII	ACGT	1 cut(s)	934
MaeIII	GTNAC	2 cut(s)	623, 1274
MalI	GATC	4 cut(s)	244, 301, 516, 744
MboI	GATC	4 cut(s)	242, 299, 514, 742
MboII	GAAGA	9 cut(s)	69, 76, 509, 601, 843, 1223, 1280, 1283, 1471
MflI	RGATCY	2 cut(s)	242, 299
MhlI	GDGCHC	3 cut(s)	174, 573, 803
MlsI	TGGCCA	1 cut(s)	430
MluI	ACGCGT	1 cut(s)	1251
MluNI	TGGCCA	1 cut(s)	430
MmeI	TCCRAC	2 cut(s)	383, 759
Mox20I	TGGCCA	1 cut(s)	430
MscI	TGGCCA	1 cut(s)	430
MseI	TTAA	7 cut(s)	68, 132, 147, 305, 1068, 1266, 1443
MslI	CAYNNNNRTG	1 cut(s)	812
Msp20I	TGGCCA	1 cut(s)	430
MspA1I	CMGCKG	1 cut(s)	842
MspR9I	CCNGG	3 cut(s)	468, 995, 1383
Mva1269I	GAATGC	1 cut(s)	634
MvaI	CCWGG	3 cut(s)	468, 995, 1383
MvnI	CGCG	1 cut(s)	1253
MwoI	GCNNNNNNNGC	3 cut(s)	640, 848, 1259
NcoI	CCATGG	1 cut(s)	646
NdeII	GATC	4 cut(s)	242, 299, 514, 742
NlaIII	CATG	6 cut(s)	364, 429, 650, 778, 811, 890
NlaIV	GGNNCC	1 cut(s)	961
NspI	RCATGY	2 cut(s)	778, 890
NspV	TTCGAA	1 cut(s)	1359
PciI	ACATGT	1 cut(s)	886
PctI	GAATGC	1 cut(s)	634
PfeI	GAWTC	4 cut(s)	332, 418, 1285, 1299
PflMI	CCANNNNNTGG	2 cut(s)	1087, 1326
PkrI	GCNGC	1 cut(s)	911
PscI	ACATGT	1 cut(s)	886
Psp6I	CCWGG	3 cut(s)	466, 993, 1381
PspEI	GGTNACC	1 cut(s)	1274
PspFI	CCCAGC	2 cut(s)	838, 1377
PspGI	CCWGG	3 cut(s)	466, 993, 1381
PspN4I	GGNNCC	1 cut(s)	961
PspPI	GGNCC	1 cut(s)	1317
PsrI	GAACNNNNNNTAC	2 cut(s)	924, 956
PstNI	CAGNNNCTG	1 cut(s)	56
PsuI	RGATCY	2 cut(s)	242, 299
PvuII	CAGCTG	1 cut(s)	842
RsaI	GTAC	4 cut(s)	154, 164, 1032, 1350
RsaNI	GTAC	4 cut(s)	153, 163, 1031, 1349
RseI	CAYNNNNRTG	1 cut(s)	812
SaqAI	TTAA	7 cut(s)	68, 132, 147, 305, 1068, 1266, 1443
SatI	GCNGC	1 cut(s)	910
Sau3AI	GATC	4 cut(s)	242, 299, 514, 742
Sau96I	GGNCC	1 cut(s)	1317
ScrFI	CCNGG	3 cut(s)	468, 995, 1383
SduI	GDGCHC	3 cut(s)	174, 573, 803
SfaNI	GCATC	6 cut(s)	223, 462, 772, 1141, 1249, 1378
SfuI	TTCGAA	1 cut(s)	1359
SinI	GGWCC	1 cut(s)	1317
SmiMI	CAYNNNNRTG	1 cut(s)	812
SmlI	CTYRAG	3 cut(s)	349, 445, 857
SmoI	CTYRAG	3 cut(s)	349, 445, 857
SspI	AATATT	1 cut(s)	1114
SspMI	CTAG	1 cut(s)	1161
StyD4I	CCNGG	3 cut(s)	466, 993, 1381
StyI	CCWWGG	2 cut(s)	646, 1081
TaaI	ACNGT	5 cut(s)	52, 491, 541, 559, 901
TaiI	ACGT	1 cut(s)	937
TaqI	TCGA	2 cut(s)	495, 1359
TatI	WGTACW	3 cut(s)	162, 1030, 1348
TfiI	GAWTC	4 cut(s)	332, 418, 1285, 1299
Tru1I	TTAA	7 cut(s)	68, 132, 147, 305, 1068, 1266, 1443
Tru9I	TTAA	7 cut(s)	68, 132, 147, 305, 1068, 1266, 1443
TscAI	CASTG	3 cut(s)	132, 165, 670
TseI	GCWGC	1 cut(s)	909
TspDTI	ATGAA	3 cut(s)	329, 349, 732
TspRI	CASTG	3 cut(s)	132, 165, 670
Van91I	CCANNNNNTGG	2 cut(s)	1087, 1326
VneI	GTGCAC	1 cut(s)	569
VpaK11BI	GGWCC	1 cut(s)	1317
XagI	CCTNNNNNAGG	1 cut(s)	465
XapI	RAATTY	4 cut(s)	29, 380, 478, 1445
XceI	RCATGY	2 cut(s)	778, 890
XspI	CTAG	1 cut(s)	1161

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.