Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0005496

Physical Location & Seq

Genomic Coordinates Reverse (-)

15826440 .. 15829570

Gene Structure 3131 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G194700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 579 bp

ATGAGACCAAGCAAAGAACCAAAGAGGCGGAGCCGCCCTTCGTCTCCGCTCAGGGACCGAACAGCAGCGCCCTCCTCCGGCTTCGAACGAAGCAGCTCGCCCAAGTCTCGCGCCTCCCGGCTCACATCGCCGGTCTCTCTTCTCAATCGAGACTTGGAAGAGCTTCAAGAGCTCGCGACTTCTTCTAACACCAACCCACGAATCTTTCCGTACAATGTGAAGCAGCAATGCTGGGAAAAGGCCGAGAAGATCAGAGGTCGAGACCCAGACCGGTGGCGTCGAGACTCTCTTGGAAACACCGTGTTCCGGAAGCTCGTCGGTTGCCCAGGTTGCCTCTGTCATGATTATGATCACATCGTGCCTTACTCTAAGGGAGGACAAAGTACGCTTGATAACTGTCAAGTTTTACAGGCAACAGTCAATCGATCAAAAGGAAACCGGACTGAGTTTTCTAGAGCTGAGCTCATTCAGAAAAGTTCCTACTGTCGGGTTTCAGGTCGTGACATGGATCTTATTGAACTGTCAGCCTATGGCAATGTTCGTCATGCACCAAATTCGGGGGGATGCAGAATCCAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HNH

Protein Analysis

193

Amino Acids

21.67

Weight (kDa)

9.9

Isoelectric Point (pI)

71.94

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005496)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G47490 AT3G47490 AT3G47490 AT3G47490 AT3G47490 AT3G47490 AT3G47490
fragaria_vesca	FvH4_5g14820 FvH4_5g14820 FvH4_5g14820 FvH4_5g14820 FvH4_5g14820 FvH4_5g14820 FvH4_5g14820 FvH4_5g14820
malus_domestica	MD06G1194600.v1.1
prunus_persica	Prupe.5G194700_v2.0.a1
pyrus_communis	pycom06g17230
rosa_chinensis	RchiOBHm_Chr7g0181571
rosa_laevigata	RLG00000005182
rosa_multiflora	Rmu_sc0000988.1_g000021
rosa_roxburghii	Rroxscaffold_3G00271890
rosa_rugosa	Rorug06G0442300 Rorug06G0442400
rosa_samantha	Rh7AG044500 Rh7BG043500 Rh7CG045300 Rh7DG044100
rosa_wichuraiana	Rw7G003690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	49
AccII	CGCG	2 cut(s)	111, 176
AccIII	TCCGGA	1 cut(s)	306
AciI	CCGC	3 cut(s)	28, 34, 47
AclWI	GGATC	1 cut(s)	516
AcsI	RAATTY	1 cut(s)	553
AcyI	GRCGYC	1 cut(s)	277
AdeI	CACNNNGTG	1 cut(s)	358
AfaI	GTAC	2 cut(s)	212, 385
AfiI	CCNNNNNNNGG	4 cut(s)	77, 306, 486, 557
AgeI	ACCGGT	1 cut(s)	270
AgsI	TTSAA	2 cut(s)	167, 518
AjnI	CCWGG	1 cut(s)	325
AluBI	AGCT	6 cut(s)	96, 163, 172, 313, 458, 463
AluI	AGCT	6 cut(s)	96, 163, 172, 313, 458, 463
Alw21I	GWGCWC	2 cut(s)	174, 465
Alw26I	GTCTC	6 cut(s)	48, 111, 139, 144, 255, 276
AlwI	GGATC	1 cut(s)	516
Aor13HI	TCCGGA	1 cut(s)	306
AoxI	GGCC	1 cut(s)	240
ApeKI	GCWGC	3 cut(s)	65, 93, 223
ApoI	RAATTY	1 cut(s)	553
AsiGI	ACCGGT	1 cut(s)	270
Asp700I	GAANNNNTTC	1 cut(s)	162
AspLEI	GCGC	2 cut(s)	70, 113
AspS9I	GGNCC	1 cut(s)	55
AsuC2I	CCSGG	1 cut(s)	118
AsuII	TTCGAA	1 cut(s)	84
AvaII	GGWCC	1 cut(s)	55
BanII	GRGCYC	2 cut(s)	174, 465
Bbv12I	GWGCWC	2 cut(s)	174, 465
BbvI	GCAGC	3 cut(s)	77, 105, 235
BcgI	CGANNNNNNTGC	2 cut(s)	537, 571
BciT130I	CCWGG	1 cut(s)	327
BclI	TGATCA	1 cut(s)	349
BcnI	CCSGG	1 cut(s)	118
BcoDI	GTCTC	6 cut(s)	48, 111, 139, 144, 255, 276
BfaI	CTAG	1 cut(s)	453
BfoI	RGCGCY	1 cut(s)	71
BisI	GCNGC	4 cut(s)	34, 66, 94, 224
BlpI	GCTNAGC	1 cut(s)	459
BlsI	GCNGC	4 cut(s)	35, 67, 95, 225
Bme1390I	CCNGG	2 cut(s)	118, 327
Bme18I	GGWCC	1 cut(s)	55
BmgT120I	GGNCC	1 cut(s)	55
BmiI	GGNNCC	2 cut(s)	32, 56
BmrFI	CCNGG	2 cut(s)	118, 327
BmsI	GCATC	1 cut(s)	554
BplI	GAGNNNNNCTC	2 cut(s)	447, 479
Bpu10I	CCTNAGC	1 cut(s)	50
Bpu1102I	GCTNAGC	1 cut(s)	459
Bpu14I	TTCGAA	1 cut(s)	84
BpuMI	CCSGG	1 cut(s)	118
Bsa29I	ATCGAT	1 cut(s)	424
BsaBI	GATNNNNATC	1 cut(s)	348
BsaHI	GRCGYC	1 cut(s)	277
BsaI	GGTCTC	2 cut(s)	139, 255
BsaJI	CCNNGG	1 cut(s)	325
BsaWI	WCCGGW	3 cut(s)	270, 306, 438
Bsc4I	CCNNNNNNNGG	4 cut(s)	77, 306, 486, 557
Bse118I	RCCGGY	2 cut(s)	130, 270
Bse3DI	GCAATG	2 cut(s)	233, 541
Bse8I	GATNNNNATC	1 cut(s)	348
BseAI	TCCGGA	1 cut(s)	306
BseBI	CCWGG	1 cut(s)	327
BseCI	ATCGAT	1 cut(s)	424
BseDI	CCNNGG	1 cut(s)	325
BseGI	GGATG	1 cut(s)	569
BseJI	GATNNNNATC	1 cut(s)	348
BseLI	CCNNNNNNNGG	4 cut(s)	77, 306, 486, 557
BseMI	GCAATG	2 cut(s)	233, 541
BseMII	CTCAG	3 cut(s)	64, 435, 450
BseRI	GAGGAG	1 cut(s)	64
BseXI	GCAGC	3 cut(s)	77, 105, 235
BseYI	CCCAGC	1 cut(s)	231
Bsh1236I	CGCG	2 cut(s)	111, 176
BshFI	GGCC	1 cut(s)	242
BshTI	ACCGGT	1 cut(s)	270
BshVI	ATCGAT	1 cut(s)	424
BsiHKAI	GWGCWC	2 cut(s)	174, 465
BsiSI	CCGG	6 cut(s)	78, 118, 131, 271, 307, 439
BslFI	GGGAC	1 cut(s)	68
BslI	CCNNNNNNNGG	4 cut(s)	77, 306, 486, 557
BsmAI	GTCTC	6 cut(s)	48, 111, 139, 144, 255, 276
BsmBI	CGTCTC	1 cut(s)	48
BsmFI	GGGAC	1 cut(s)	68
BsnI	GGCC	1 cut(s)	242
Bso31I	GGTCTC	2 cut(s)	139, 255
Bsp119I	TTCGAA	1 cut(s)	84
Bsp1286I	GDGCHC	2 cut(s)	174, 465
Bsp13I	TCCGGA	1 cut(s)	306
Bsp143I	GATC	4 cut(s)	249, 349, 425, 508
Bsp1720I	GCTNAGC	1 cut(s)	459
Bsp68I	TCGCGA	1 cut(s)	176
BspACI	CCGC	3 cut(s)	28, 34, 47
BspANI	GGCC	1 cut(s)	242
BspCNI	CTCAG	3 cut(s)	63, 436, 451
BspDI	ATCGAT	1 cut(s)	424
BspEI	TCCGGA	1 cut(s)	306
BspFNI	CGCG	2 cut(s)	111, 176
BspHI	TCATGA	1 cut(s)	340
BspLI	GGNNCC	2 cut(s)	32, 56
BspPI	GGATC	1 cut(s)	516
BspQI	GCTCTTC	1 cut(s)	153
BspT104I	TTCGAA	1 cut(s)	84
BspTNI	GGTCTC	2 cut(s)	139, 255
BsrBI	CCGCTC	1 cut(s)	49
BsrDI	GCAATG	2 cut(s)	233, 541
BsrFI	RCCGGY	2 cut(s)	130, 270
BssAI	RCCGGY	2 cut(s)	130, 270
BssECI	CCNNGG	1 cut(s)	325
BssMI	GATC	4 cut(s)	249, 349, 425, 508
BssNI	GRCGYC	1 cut(s)	277
Bst2UI	CCWGG	1 cut(s)	327
Bst4CI	ACNGT	5 cut(s)	301, 398, 418, 485, 522
Bst6I	CTCTTC	2 cut(s)	144, 153
BstACI	GRCGYC	1 cut(s)	277
BstBI	TTCGAA	1 cut(s)	84
BstC8I	GCNNGC	2 cut(s)	98, 174
BstDEI	CTNAG	4 cut(s)	50, 369, 444, 459
BstF5I	GGATG	1 cut(s)	569
BstFNI	CGCG	2 cut(s)	111, 176
BstH2I	RGCGCY	1 cut(s)	71
BstHHI	GCGC	2 cut(s)	70, 113
BstKTI	GATC	4 cut(s)	252, 352, 428, 511
BstMAI	GTCTC	6 cut(s)	48, 111, 139, 144, 255, 276
BstMBI	GATC	4 cut(s)	249, 349, 425, 508
BstMWI	GCNNNNNNNGC	3 cut(s)	127, 169, 330
BstNI	CCWGG	1 cut(s)	327
BstSCI	CCNGG	2 cut(s)	116, 325
BstUI	CGCG	2 cut(s)	111, 176
BstV1I	GCAGC	3 cut(s)	77, 105, 235
BstX2I	RGATCY	1 cut(s)	508
BstXI	CCANNNNNNTGG	1 cut(s)	273
BstYI	RGATCY	1 cut(s)	508
Bsu15I	ATCGAT	1 cut(s)	424
BsuRI	GGCC	1 cut(s)	242
BsuTUI	ATCGAT	1 cut(s)	424
BtgZI	GCGATG	1 cut(s)	111
BtsCI	GGATG	1 cut(s)	569
BtuMI	TCGCGA	1 cut(s)	176
Cac8I	GCNNGC	2 cut(s)	98, 174
CciI	TCATGA	1 cut(s)	340
CfoI	GCGC	2 cut(s)	70, 113
Cfr10I	RCCGGY	2 cut(s)	130, 270
Cfr13I	GGNCC	1 cut(s)	55
ClaI	ATCGAT	1 cut(s)	424
CseI	GACGC	1 cut(s)	266
Csp6I	GTAC	2 cut(s)	211, 384
CspAI	ACCGGT	1 cut(s)	270
CviAII	CATG	3 cut(s)	341, 505, 545
CviQI	GTAC	2 cut(s)	211, 384
DdeI	CTNAG	4 cut(s)	50, 369, 444, 459
DpnI	GATC	4 cut(s)	251, 351, 427, 510
DpnII	GATC	4 cut(s)	249, 349, 425, 508
DraIII	CACNNNGTG	1 cut(s)	358
Eam1104I	CTCTTC	2 cut(s)	144, 153
EarI	CTCTTC	2 cut(s)	144, 153
EciI	GGCGGA	1 cut(s)	43
Ecl136II	GAGCTC	2 cut(s)	172, 463
Eco24I	GRGCYC	2 cut(s)	174, 465
Eco31I	GGTCTC	2 cut(s)	139, 255
Eco47I	GGWCC	1 cut(s)	55
Eco53kI	GAGCTC	2 cut(s)	172, 463
EcoICRI	GAGCTC	2 cut(s)	172, 463
EcoRII	CCWGG	1 cut(s)	325
EcoT38I	GRGCYC	2 cut(s)	174, 465
Esp3I	CGTCTC	1 cut(s)	48
FaeI	CATG	3 cut(s)	344, 508, 548
FaiI	YATR	5 cut(s)	342, 348, 506, 531, 546
FaqI	GGGAC	1 cut(s)	68
FatI	CATG	3 cut(s)	340, 504, 544
FbaI	TGATCA	1 cut(s)	349
Fnu4HI	GCNGC	4 cut(s)	34, 66, 94, 224
FriOI	GRGCYC	2 cut(s)	174, 465
Fsp4HI	GCNGC	4 cut(s)	34, 66, 94, 224
FspBI	CTAG	1 cut(s)	453
GlaI	GCGC	2 cut(s)	69, 112
GluI	GCNGC	4 cut(s)	34, 66, 94, 224
GsaI	CCCAGC	1 cut(s)	235
HaeII	RGCGCY	1 cut(s)	71
HaeIII	GGCC	1 cut(s)	242
HapII	CCGG	6 cut(s)	78, 118, 131, 271, 307, 439
HgaI	GACGC	1 cut(s)	266
HhaI	GCGC	2 cut(s)	70, 113
Hin1I	GRCGYC	1 cut(s)	277
Hin1II	CATG	3 cut(s)	344, 508, 548
Hin6I	GCGC	2 cut(s)	68, 111
HinP1I	GCGC	2 cut(s)	68, 111
HinfI	GANTC	3 cut(s)	201, 284, 570
HpaII	CCGG	6 cut(s)	78, 118, 131, 271, 307, 439
Hpy188I	TCNGA	2 cut(s)	254, 471
Hpy188III	TCNNGA	9 cut(s)	149, 167, 175, 260, 281, 307, 341, 453, 500
Hpy99I	CGWCG	2 cut(s)	282, 320
HpyAV	CCTTC	1 cut(s)	48
HpyCH4III	ACNGT	5 cut(s)	301, 398, 418, 485, 522
HpyCH4V	TGCA	2 cut(s)	548, 567
HpyF10VI	GCNNNNNNNGC	3 cut(s)	127, 169, 330
HpyF3I	CTNAG	4 cut(s)	50, 369, 444, 459
Hsp92I	GRCGYC	1 cut(s)	277
Hsp92II	CATG	3 cut(s)	344, 508, 548
HspAI	GCGC	2 cut(s)	68, 111
Kpn2I	TCCGGA	1 cut(s)	306
Ksp22I	TGATCA	1 cut(s)	349
Kzo9I	GATC	4 cut(s)	249, 349, 425, 508
LguI	GCTCTTC	1 cut(s)	153
LmnI	GCTCC	1 cut(s)	30
Lsp1109I	GCAGC	3 cut(s)	77, 105, 235
LweI	GCATC	1 cut(s)	554
MaeI	CTAG	1 cut(s)	453
MaeIII	GTNAC	1 cut(s)	500
MalI	GATC	4 cut(s)	251, 351, 427, 510
MbiI	CCGCTC	1 cut(s)	49
MboI	GATC	4 cut(s)	249, 349, 425, 508
MboII	GAAGA	4 cut(s)	131, 170, 174, 259
MflI	RGATCY	1 cut(s)	508
MhlI	GDGCHC	2 cut(s)	174, 465
MluCI	AATT	1 cut(s)	553
MlyI	GAGTC	1 cut(s)	278
MnlI	CCTC	7 cut(s)	18, 82, 85, 124, 248, 344, 368
MroI	TCCGGA	1 cut(s)	306
MroXI	GAANNNNTTC	1 cut(s)	162
MslI	CAYNNNNRTG	1 cut(s)	345
MspI	CCGG	6 cut(s)	78, 118, 131, 271, 307, 439
MspR9I	CCNGG	2 cut(s)	118, 327
MvaI	CCWGG	1 cut(s)	327
MvnI	CGCG	2 cut(s)	111, 176
MwoI	GCNNNNNNNGC	3 cut(s)	127, 169, 330
NciI	CCSGG	1 cut(s)	118
NdeII	GATC	4 cut(s)	249, 349, 425, 508
NlaIII	CATG	3 cut(s)	344, 508, 548
NlaIV	GGNNCC	2 cut(s)	32, 56
NmeAIII	GCCGAG	1 cut(s)	268
NmuCI	GTSAC	1 cut(s)	500
NruI	TCGCGA	1 cut(s)	176
NspV	TTCGAA	1 cut(s)	84
PagI	TCATGA	1 cut(s)	340
PciSI	GCTCTTC	1 cut(s)	153
PdmI	GAANNNNTTC	1 cut(s)	162
PfeI	GAWTC	2 cut(s)	201, 570
PinAI	ACCGGT	1 cut(s)	270
PkrI	GCNGC	4 cut(s)	35, 67, 95, 225
PleI	GAGTC	1 cut(s)	278
PpsI	GAGTC	1 cut(s)	278
Psp124BI	GAGCTC	2 cut(s)	174, 465
Psp6I	CCWGG	1 cut(s)	325
PspFI	CCCAGC	1 cut(s)	231
PspGI	CCWGG	1 cut(s)	325
PspN4I	GGNNCC	2 cut(s)	32, 56
PspPI	GGNCC	1 cut(s)	55
PsuI	RGATCY	1 cut(s)	508
RruI	TCGCGA	1 cut(s)	176
RsaI	GTAC	2 cut(s)	212, 385
RsaNI	GTAC	2 cut(s)	211, 384
RseI	CAYNNNNRTG	1 cut(s)	345
SacI	GAGCTC	2 cut(s)	174, 465
SapI	GCTCTTC	1 cut(s)	153
SatI	GCNGC	4 cut(s)	34, 66, 94, 224
Sau3AI	GATC	4 cut(s)	249, 349, 425, 508
Sau96I	GGNCC	1 cut(s)	55
SchI	GAGTC	1 cut(s)	278
ScrFI	CCNGG	2 cut(s)	118, 327
SduI	GDGCHC	2 cut(s)	174, 465
SetI	ASST	9 cut(s)	98, 165, 174, 259, 315, 331, 460, 465, 499
SfaNI	GCATC	1 cut(s)	554
SfuI	TTCGAA	1 cut(s)	84
SinI	GGWCC	1 cut(s)	55
SmiMI	CAYNNNNRTG	1 cut(s)	345
Sse9I	AATT	1 cut(s)	553
SsiI	CCGC	3 cut(s)	28, 34, 47
SspMI	CTAG	1 cut(s)	453
SstI	GAGCTC	2 cut(s)	174, 465
StyD4I	CCNGG	2 cut(s)	116, 325
TaaI	ACNGT	5 cut(s)	301, 398, 418, 485, 522
TaqI	TCGA	5 cut(s)	84, 148, 259, 280, 424
TaqII	GACCGA	1 cut(s)	72
TasI	AATT	1 cut(s)	553
TauI	GCSGC	1 cut(s)	36
TfiI	GAWTC	2 cut(s)	201, 570
TseFI	GTSAC	1 cut(s)	500
TseI	GCWGC	3 cut(s)	65, 93, 223
Tsp45I	GTSAC	1 cut(s)	500
TspGWI	ACGGA	1 cut(s)	198
VpaK11BI	GGWCC	1 cut(s)	55
XapI	RAATTY	1 cut(s)	553
XbaI	TCTAGA	1 cut(s)	452
XmnI	GAANNNNTTC	1 cut(s)	162
XspI	CTAG	1 cut(s)	453

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.